Foundations of Paleoparasitology
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The Morphological and Molecular Characterization of Baylisascaris
Sharifdini et al. Parasites Vectors (2021) 14:33 https://doi.org/10.1186/s13071-020-04513-4 Parasites & Vectors RESEARCH Open Access The morphological and molecular characterization of Baylisascaris devosi Sprent, 1952 (Ascaridoidea, Nematoda), collected from Pine marten (Martes martes) in Iran Meysam Sharifdini1*, Richard A. Heckmann2 and Fattaneh Mikaeili3 Abstract Background: Baylisascaris devosi is an intestinal nematode found in several carnivores including fsher, wolverine, Beech marten, American marten and sable in diferent parts of the world, but this nematode has not been reported from Pine marten. Therefore, this study aimed to identify Baylisascaris isolated from a Pine marten in Iran using mor- phological and molecular approaches. Methods: Specimens of B. devosi were collected from one road-killed Pine marten in northern Iran. Morphological features were evaluated using scanning electron microscopy, energy dispersive x-ray analysis and ion sectioning. The molecular characterization was carried out using partial Cox1, LSU rDNA and ITS-rDNA genes. Results: The nematodes isolated from the Pine marten were confrmed to be B. devosi based on the morphological features and the sequence of ribosomal and mitochondrial loci. X-ray scans (EDAX) were completed on gallium cut structures (papillae, eggs, male spike and mouth denticles) of B. devosi using a dual-beam scanning electron micro- scope. The male spike and mouth denticles had a high level of hardening elements (Ca, P, S), helping to explain the chemical nature and morphology of the worm. Based on these genetic marker analyses, our sequence had the great- est similarity with Russian B. devosi isolated from sable. Conclusions: In this study, to our knowledge, the occurrence of B. -
Balantidium Coli
GLOBAL WATER PATHOGEN PROJECT PART THREE. SPECIFIC EXCRETED PATHOGENS: ENVIRONMENTAL AND EPIDEMIOLOGY ASPECTS BALANTIDIUM COLI Francisco Ponce-Gordo Complutense University Madrid, Spain Kateřina Jirků-Pomajbíková Institute of Parasitology Biology Centre, ASCR, v.v.i. Budweis, Czech Republic Copyright: This publication is available in Open Access under the Attribution-ShareAlike 3.0 IGO (CC-BY-SA 3.0 IGO) license (http://creativecommons.org/licenses/by-sa/3.0/igo). By using the content of this publication, the users accept to be bound by the terms of use of the UNESCO Open Access Repository (http://www.unesco.org/openaccess/terms-use-ccbysa-en). Disclaimer: The designations employed and the presentation of material throughout this publication do not imply the expression of any opinion whatsoever on the part of UNESCO concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The ideas and opinions expressed in this publication are those of the authors; they are not necessarily those of UNESCO and do not commit the Organization. Citation: Ponce-Gordo, F., Jirků-Pomajbíková, K. 2017. Balantidium coli. In: J.B. Rose and B. Jiménez-Cisneros, (eds) Global Water Pathogens Project. http://www.waterpathogens.org (R. Fayer and W. Jakubowski, (eds) Part 3 Protists) http://www.waterpathogens.org/book/balantidium-coli Michigan State University, E. Lansing, MI, UNESCO. Acknowledgements: K.R.L. Young, Project Design editor; Website Design (http://www.agroknow.com) Published: January 15, 2015, 11:50 am, Updated: October 18, 2017, 5:43 pm Balantidium coli Summary 1.1.1 Global distribution Balantidium coli is reported worldwide although it is To date, Balantidium coli is the only ciliate protozoan more common in temperate and tropical regions (Areán and reported to infect the gastrointestinal track of humans. -
Comparative Functional Morphology of Attachment Devices in Arachnida
Comparative functional morphology of attachment devices in Arachnida Vergleichende Funktionsmorphologie der Haftstrukturen bei Spinnentieren (Arthropoda: Arachnida) DISSERTATION zur Erlangung des akademischen Grades doctor rerum naturalium (Dr. rer. nat.) an der Mathematisch-Naturwissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel vorgelegt von Jonas Otto Wolff geboren am 20. September 1986 in Bergen auf Rügen Kiel, den 2. Juni 2015 Erster Gutachter: Prof. Stanislav N. Gorb _ Zweiter Gutachter: Dr. Dirk Brandis _ Tag der mündlichen Prüfung: 17. Juli 2015 _ Zum Druck genehmigt: 17. Juli 2015 _ gez. Prof. Dr. Wolfgang J. Duschl, Dekan Acknowledgements I owe Prof. Stanislav Gorb a great debt of gratitude. He taught me all skills to get a researcher and gave me all freedom to follow my ideas. I am very thankful for the opportunity to work in an active, fruitful and friendly research environment, with an interdisciplinary team and excellent laboratory equipment. I like to express my gratitude to Esther Appel, Joachim Oesert and Dr. Jan Michels for their kind and enthusiastic support on microscopy techniques. I thank Dr. Thomas Kleinteich and Dr. Jana Willkommen for their guidance on the µCt. For the fruitful discussions and numerous information on physical questions I like to thank Dr. Lars Heepe. I thank Dr. Clemens Schaber for his collaboration and great ideas on how to measure the adhesive forces of the tiny glue droplets of harvestmen. I thank Angela Veenendaal and Bettina Sattler for their kind help on administration issues. Especially I thank my students Ingo Grawe, Fabienne Frost, Marina Wirth and André Karstedt for their commitment and input of ideas. -
New Zealand's Genetic Diversity
1.13 NEW ZEALAND’S GENETIC DIVERSITY NEW ZEALAND’S GENETIC DIVERSITY Dennis P. Gordon National Institute of Water and Atmospheric Research, Private Bag 14901, Kilbirnie, Wellington 6022, New Zealand ABSTRACT: The known genetic diversity represented by the New Zealand biota is reviewed and summarised, largely based on a recently published New Zealand inventory of biodiversity. All kingdoms and eukaryote phyla are covered, updated to refl ect the latest phylogenetic view of Eukaryota. The total known biota comprises a nominal 57 406 species (c. 48 640 described). Subtraction of the 4889 naturalised-alien species gives a biota of 52 517 native species. A minimum (the status of a number of the unnamed species is uncertain) of 27 380 (52%) of these species are endemic (cf. 26% for Fungi, 38% for all marine species, 46% for marine Animalia, 68% for all Animalia, 78% for vascular plants and 91% for terrestrial Animalia). In passing, examples are given both of the roles of the major taxa in providing ecosystem services and of the use of genetic resources in the New Zealand economy. Key words: Animalia, Chromista, freshwater, Fungi, genetic diversity, marine, New Zealand, Prokaryota, Protozoa, terrestrial. INTRODUCTION Article 10b of the CBD calls for signatories to ‘Adopt The original brief for this chapter was to review New Zealand’s measures relating to the use of biological resources [i.e. genetic genetic resources. The OECD defi nition of genetic resources resources] to avoid or minimize adverse impacts on biological is ‘genetic material of plants, animals or micro-organisms of diversity [e.g. genetic diversity]’ (my parentheses). -
The Fate of the Neanderthals Announcement
The Fate of the Neanderthals Announcement The first midterm exam will take place in class on Monday, October 1. You only need to bring a pencil or pen with you. The exam will have 2 parts: 1) 16 multiple choice questions (1 point each, 15 minutes) 2) 6 out of 7 short IDs (4 points each, 30 minutes) Sample questions are posted on the course website. After Homo erectus, several species of archaic Homo emerged during the Middle Paleolithic Homo heidelbergensis, Neanderthals, and Denisovans are often called “Archaic Homo” or “Archaic Humans” Neanderthals Homo sapiens Denisovans (400-30kya) (200kya-present) (40kya) Europe and Middle East Africa first Asia Homo heidelbergensis (600-200kya) Africa, Europe, and the Middle East Homo erectus (2mya-150kya?) Africa and Asia. Europe? Outline of Today’s Class: The Fate of the Neanderthals 1) Neanderthal biology and behavior 2) Modern humans - Early expansions out of Africa >100kya - Later expansions out of Africa 60kya associated with Upper Paleolithic modern human behavior 3) Neanderthal ancient DNA and clues about Neanderthal extinction The Neanderthals (300kya-30kya) • First fossils discovered in 1856 in the Neander Valley, Germany. • Large brains, large noses, and large brow ridges. Short, stocky bodies. • Cold-weather adapted to life during the Pleistocene “Ice Ages” (ca. 736kya-11.7kya). • Covered a wide geographic range extending from Europe to the Near Boyd & Silk (2014). East and West Asia. • Neanderthals living in different regions had different diets and behaviors (e.g., European Neanderthals hunted large game whereas Near Eastern Neanderthals had a more diverse diet of plants and small animals). -
Platypus Collins, L.R
AUSTRALIAN MAMMALS BIOLOGY AND CAPTIVE MANAGEMENT Stephen Jackson © CSIRO 2003 All rights reserved. Except under the conditions described in the Australian Copyright Act 1968 and subsequent amendments, no part of this publication may be reproduced, stored in a retrieval system or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, duplicating or otherwise, without the prior permission of the copyright owner. Contact CSIRO PUBLISHING for all permission requests. National Library of Australia Cataloguing-in-Publication entry Jackson, Stephen M. Australian mammals: Biology and captive management Bibliography. ISBN 0 643 06635 7. 1. Mammals – Australia. 2. Captive mammals. I. Title. 599.0994 Available from CSIRO PUBLISHING 150 Oxford Street (PO Box 1139) Collingwood VIC 3066 Australia Telephone: +61 3 9662 7666 Local call: 1300 788 000 (Australia only) Fax: +61 3 9662 7555 Email: [email protected] Web site: www.publish.csiro.au Cover photos courtesy Stephen Jackson, Esther Beaton and Nick Alexander Set in Minion and Optima Cover and text design by James Kelly Typeset by Desktop Concepts Pty Ltd Printed in Australia by Ligare REFERENCES reserved. Chapter 1 – Platypus Collins, L.R. (1973) Monotremes and Marsupials: A Reference for Zoological Institutions. Smithsonian Institution Press, rights Austin, M.A. (1997) A Practical Guide to the Successful Washington. All Handrearing of Tasmanian Marsupials. Regal Publications, Collins, G.H., Whittington, R.J. & Canfield, P.J. (1986) Melbourne. Theileria ornithorhynchi Mackerras, 1959 in the platypus, 2003. Beaven, M. (1997) Hand rearing of a juvenile platypus. Ornithorhynchus anatinus (Shaw). Journal of Wildlife Proceedings of the ASZK/ARAZPA Conference. 16–20 March. -
Guide 2009 Revised Complete
<add OECD logo> GUIDE TO MEASURING THE INFORMATION SOCIETY, 2009 1 FOREWORD The Working Party on Indicators for the Information Society (WPIIS) first discussed the Guide for Measuring the Information Society at its April 2005 meeting. A number of WPIIS delegates and others provided comments, both before and after the meeting. The Guide was first published at the end of 2005. It was prepared by Sheridan Roberts of the OECD with substantial input from a number of other contributors. This revision was also prepared by Sheridan Roberts (as a consultant to the OECD), again with the assistance of other contributors (see Acknowledgements for details). A draft was presented to the 2007 WPIIS meeting and delegates were invited to provide comments. Further changes were made during 2008 and 2009, mainly reflecting finalisation of the information economy product classifications (affecting Chapters 2 and 7, and Annex 1a). The Guide is published under the responsibility of the Secretary-General of the OECD. © Copyright OECD/OCDE, 2009 2 TABLE OF CONTENTS FOREWORD...................................................................................................................................................2 PREFACE .......................................................................................................................................................9 CHAPTER 1: INTRODUCTION..................................................................................................................11 The information society, in statistical terms -
High Consistency of Trophic Niches in Soil Microarthropod Species
1 Supplementary materials 2 High consistency of trophic niches in soil microarthropod species 3 (Oribatida, Acari) across soil depth and forest type 4 Authors: Jing-Zhong Lu1*, Peter Cordes1, Mark Maraun1, Stefan Scheu1,2 5 6 Affiliations: 7 1. Johann-Friedrich-Blumenbach Institute of Zoology and Anthropology, Universität Göttingen, 8 Untere Karspüle 2, 37073 Göttingen, Germany 9 2. Center of Biodiversity and Sustainable Land Use, Universität Göttingen, Büsgenweg 1, 37077 10 Göttingen, Germany 11 * Corresponding author (E-mail: [email protected]) 12 13 Supplementary Tables 14 Table S1 15 Species list Oribatida (n = 40). Trophic guilds were assigned according to litter calibrated δ13C and 16 δ15N values: primary decomposer, secondary decomposer, endophagous Oribatida and 17 scavenger/predator. Total number of animals for each species used for stable isotopes and their 18 ranges (min - max) are given. Total number Trophic Oribatid taxa Family (range) δ13C δ15N guilds Ceratozetes minimus Sellnick, 1928 Ceratozetidae 10 (10-10) 2.95 ± 0.06 11.02 ± 0.17 predator Hypochthonius rufulus C. L. Koch, 1835 Hypochthoniidae 4 (2-7) 3.15 ± 0.77 6.23 ± 0.96 predator Metabelba pulverosa Strenzke, 1953 Damaeidae 3 (3-3) 3.08 ± 0.25 6.29 ± 2.40 predator Microppia minus (Paoli, 1908) Oppiidae 19 (7-25) 2.42 ± 0.28 8.74 ± 2.42 predator Oppiella nova (Oudemans, 1902) Oppiidae 14 (8-17) 2.70 ± 1.84 6.73 ± 2.79 predator Oppiella subpectinata (Oudemans, 1900) Oppiidae 9 (3-16) 2.93 ± 0.93 7.28 ± 1.96 predator Suctobelbella spp Jacot, 1937 Suctobelbidae 22 (18-26) 3.00 ± 0.74 6.69 ± 0.72 predator Acrogalumna longipluma (Berlese, 1904) Galumnidae 4 (3-5) 4.41 ± 0.18 5.06 ± 0.12 endophagous Carabodes ornatus Storkan, 1925 Carabodidae 2 (1-3) 3.26 ± 1.79 0.68 ± 0.52 endophagous Liacarus coracinus (C. -
What Makes a Modern Human We Probably All Carry Genes from Archaic Species Such As Neanderthals
COMMENT NATURAL HISTORY Edward EARTH SCIENCE How rocks and MUSIC Philip Glass on Einstein EMPLOYMENT The skills gained Lear’s forgotten work life evolved together on our and the unpredictability of in PhD training make it on ornithology p.36 planet p.39 opera composition p.40 worth the money p.41 ILLUSTRATION BY CHRISTIAN DARKIN CHRISTIAN BY ILLUSTRATION What makes a modern human We probably all carry genes from archaic species such as Neanderthals. Chris Stringer explains why the DNA we have in common is more important than any differences. n many ways, what makes a modern we were trying to set up strict criteria, based non-modern (or, in palaeontological human is obvious. Compared with our on cranial measurements, to test whether terms, archaic). What I did not foresee evolutionary forebears, Homo sapiens is controversial fossils from Omo Kibish in was that some researchers who were not Icharacterized by a lightly built skeleton and Ethiopia were within the range of human impressed with our test would reverse it, several novel skull features. But attempts to skeletal variation today — anatomically applying it back onto the skeletal range of distinguish the traits of modern humans modern humans. all modern humans to claim that our diag- from those of our ancestors can be fraught Our results suggested that one skull nosis wrongly excluded some skulls of with problems. was modern, whereas the other was recent populations from being modern2. Decades ago, a colleague and I got into This, they suggested, implied that some difficulties over an attempt to define (or, as PEOPLING THE PLANET people today were more ‘modern’ than oth- I prefer, diagnose) modern humans using Interactive map of migrations: ers. -
The Armoured Mite Fauna (Acari: Oribatida) from a Long-Term Study in the Scots Pine Forest of the Northern Vidzeme Biosphere Reserve, Latvia
FRAGMENTA FAUNISTICA 57 (2): 141–149, 2014 PL ISSN 0015-9301 © MUSEUM AND INSTITUTE OF ZOOLOGY PAS DOI 10.3161/00159301FF2014.57.2.141 The armoured mite fauna (Acari: Oribatida) from a long-term study in the Scots pine forest of the Northern Vidzeme Biosphere Reserve, Latvia 1 2 1 Uģis KAGAINIS , Voldemārs SPUNĢIS and Viesturs MELECIS 1 Institute of Biology, University of Latvia, 3 Miera Street, LV-2169, Salaspils, Latvia; e-mail: [email protected] (corresponding author) 2 Department of Zoology and Animal Ecology, Faculty of Biology,University of Latvia, 4 Kronvalda Blvd., LV-1586, Riga, Latvia; e-mail: [email protected] Abstract: In 1992–2012, a considerable amount of soil micro-arthropods has been collected annually as a part of a project of the National Long-Term Ecological Research Network of Latvia at the Mazsalaca Scots Pine forest sites of the North Vidzeme Biosphere Reserve. Until now, the data on oribatid species have not been published. This paper presents a list of oribatid species collected during 21 years of ongoing research in three pine stands of different age. The faunistic records refer to 84 species (including 17 species new to the fauna of Latvia), 1 subspecies, 1 form, 5 morphospecies and 18 unidentified taxa. The most dominant and most frequent oribatid species are Oppiella (Oppiella) nova, Tectocepheus velatus velatus and Suctobelbella falcata. Key words: species list, fauna, stand-age, LTER, Mazsalaca INTRODUCTION Most studies of Oribatida or the so-called armoured mites (Subías 2004) have been relatively short term and/or from different ecosystems simultaneously and do not show long- term changes (Winter et al. -
Acari: Oribatida) of Canada and Alaska
Zootaxa 4666 (1): 001–180 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Monograph ZOOTAXA Copyright © 2019 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4666.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:BA01E30E-7F64-49AB-910A-7EE6E597A4A4 ZOOTAXA 4666 Checklist of oribatid mites (Acari: Oribatida) of Canada and Alaska VALERIE M. BEHAN-PELLETIER1,3 & ZOË LINDO1 1Agriculture and Agri-Food Canada, Canadian National Collection of Insects, Arachnids and Nematodes, Ottawa, Ontario, K1A0C6, Canada. 2Department of Biology, University of Western Ontario, London, Canada 3Corresponding author. E-mail: [email protected] Magnolia Press Auckland, New Zealand Accepted by T. Pfingstl: 26 Jul. 2019; published: 6 Sept. 2019 Licensed under a Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0 VALERIE M. BEHAN-PELLETIER & ZOË LINDO Checklist of oribatid mites (Acari: Oribatida) of Canada and Alaska (Zootaxa 4666) 180 pp.; 30 cm. 6 Sept. 2019 ISBN 978-1-77670-761-4 (paperback) ISBN 978-1-77670-762-1 (Online edition) FIRST PUBLISHED IN 2019 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] https://www.mapress.com/j/zt © 2019 Magnolia Press ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) 2 · Zootaxa 4666 (1) © 2019 Magnolia Press BEHAN-PELLETIER & LINDO Table of Contents Abstract ...................................................................................................4 Introduction ................................................................................................5 -
Enhancing Archaeoparasitology By
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE DIGGING DEEPER: ENHANCING ARCHAEOPARASITOLOGY BY COMBINING MOLECULAR METHODS WITH TRADITIONAL MORPHOLOGICAL APPROACHES A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By LAUREN MARIE CLEELAND Norman, Oklahoma 2015 DIGGING DEEPER: ENHANCING ARCHAEOPARASITOLOGY BY COMBINING MOLECULAR METHODS WITH TRADITIONAL MORPHOLOGICAL APPROACHES A DISSERTATION APPROVED FOR THE DEPARTMENT OF ANTHROPOLOGY BY ______________________________ Dr. Cecil M. Lewis, Co-Chair ______________________________ Dr. Susan C. Vehik, Co-Chair ______________________________ Dr. Tassie Hirschfeld ______________________________ Dr. Patrick Livingood ______________________________ Dr. Paul Lawson © Copyright by LAUREN MARIE CLEELAND 2015 All Rights Reserved. I dedicate this dissertation to the memory of my husband, Peter Riley Cleeland (1966-2012). Acknowledgements I offer my deepest gratitude to the members of my committee, who have encouraged and supported me through the doctoral process. Especially, I thank Dr. Cecil Lewis and Dr. Susan Vehik for their guidance and the gift of their knowledge, and supporting me through the loss of my husband, which delayed this process. I thank Dr. Tassie Hirschfeld for her insight and direction in thinking about the modern implications of prehistoric parasite work. I thank Dr. Patrick Livingood for his wisdom and enthusiasm and his willingness to always discuss a variety of topics. I thank Dr. Paul Lawson for bringing a broader ecological consideration to the study of prehistoric parasitism. I thank the University of Oklahoma Graduate School for providing the opportunity for me to study and gain the experience I need to master the concepts that have culminated in this dissertation. I thank the Department of Anthropology for their support and guidance.