Effective Singlet Oxygen Sensitizers Based on the Phenazine Skeleton
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Transparent Photochemistry: Infrared Photosensitizers and Singlet Oxygen Microscopy
Transparent Photochemistry: Infrared photosensitizers and singlet oxygen microscopy Elsa Fernanda Freitas da Silva Tese orientada por: Luís Guilherme da Silva Arnaut Moreira e Peter Remsen Ogilby Universidade de Coimbra Tese de Doutoramento em Química, especialidade Fotoquímica apresentada ao Departamento de Química da Faculdade de Ciências e tecnologia da Universidade de Coimbra. Coimbra, Julho de 2013 Acknowledgements This dissertation is the result of joint efforts, collaborations and help by many people. I want to express my appreciation to my supervisor, Professor Luis G. Arnaut, for his guidance, support and availability. His enthusiasm with science and motivation are an example to me. It has been a great pleasure to work in his group. To my group of colleagues in Coimbra: Rui Nunes, Gonçalo Sá, Ligia Silva, Hélder Tão, I want to thank you all for the support and fellowship. Specially, I want to thank Carlos Serpa for his availability to help and assistance me with the laser systems and, Fábio Schaberle for his assistance with photoacoustic calorimetry experiments and for been actively interested on my work providing me with great comments that were valued greatly. My special thanks to Professor Peter R. Ogilby for accepting to be my co-supervisor and give me the opportunity to work with different techniques in his laboratory in the University of Aarhus in Denmark. Peter valuable suggestions have greatly improved my scientific work. I have had a great time working in COMIs group. I want to thank all COMI group members whom I have encountered during my stay, for their great support and welcoming. Brian Wett for walking me through the laboratory on my first times. -
States of Oxygen Liquid and Singlet Oxygen Photodynamic Therapy
Oxygen States of Oxygen As far as allotropes go, oxygen as an element is fairly uninteresting, with ozone (O3, closed-shell and C2v symmetric like SO2) and O2 being the stable molecular forms. Most of our attention today will be devoted to the O2 molecule that is so critically connected with life on Earth. 2 2 2 4 2 O2 has the following valence electron configuration: (1σg) (1σu) (2σg) (1πu) (1πg) . It is be- cause of the presence of only two electrons in the two π* orbitals labelled 1πg that oxygen is paramagnetic with a triplet (the spin multiplicity \triplet" is given by 2S+1; here S, the total spin quantum number, is 0.5 + 0.5 = 1). There are six possible ways to arrange the two electrons in the two degenerate π* orbitals. These different ways of arranging the electrons in the open shell are called \microstates". Further, because there are six microstates, we can say that the total degeneracy of the electronic states 2 3 − arising from (1πg) configuration must be equal to six. The ground state of O2 is labeled Σg , the left superscript 3 indicating that this is a triplet state. It is singly degenerate orbitally and triply degenerate in terms of spin multiplicity; the total degeneracy (three for the ground state) is given by the spin times the orbital degeneracy. 1 The first excited state of O2 is labeled ∆g, and this has a spin degeneracy of one and an orbital degeneracy of two for a total degeneracy of two. This state corresponds to spin pairing of the electrons in the same π* orbital. -
Radical Approaches to Alangium and Mitragyna Alkaloids
Radical Approaches to Alangium and Mitragyna Alkaloids A Thesis Submitted for a PhD University of York Department of Chemistry 2010 Matthew James Palframan Abstract The work presented in this thesis has focused on the development of novel and concise syntheses of Alangium and Mitragyna alkaloids, and especial approaches towards (±)-protoemetinol (a), which is a key precursor of a range of Alangium alkaloids such as psychotrine (b) and deoxytubulosine (c). The approaches include the use of a key radical cyclisation to form the tri-cyclic core. O O O N N N O O O H H H H H H O N NH N Protoemetinol OH HO a Psychotrine Deoxytubulosine b c Chapter 1 gives a general overview of radical chemistry and it focuses on the application of radical intermolecular and intramolecular reactions in synthesis. Consideration is given to the mediator of radical reactions from the classic organotin reagents, to more recently developed alternative hydrides. An overview of previous synthetic approaches to a range of Alangium and Mitragyna alkaloids is then explored. Chapter 2 follows on from previous work within our group, involving the use of phosphorus hydride radical addition reactions, to alkenes or dienes, followed by a subsequent Horner-Wadsworth-Emmons reaction. It was expected that the tri-cyclic core of the Alangium alkaloids could be prepared by cyclisation of a 1,7-diene, using a phosphorus hydride to afford the phosphonate or phosphonothioate, however this approach was unsuccessful and it highlighted some limitations of the methodology. Chapter 3 explores the radical and ionic chemistry of a range of silanes. -
Synthesis and Kinetics of Novel Ionic Liquid Soluble Hydrogen Atom Transfer Reagents
Synthesis and kinetics of novel ionic liquid soluble hydrogen atom transfer reagents Thomas William Garrard Submitted in total fulfilment of the requirements of the degree Doctor of Philosophy June 2018 School of Chemistry The University of Melbourne Produced on archival quality paper ORCID: 0000-0002-2987-0937 Abstract The use of radical methodologies has been greatly developed in the last 50 years, and in an effort to continue this progress, the reactivity of radical reactions in greener alternative solvents is desired. The work herein describes the synthesis of novel hydrogen atom transfer reagents for use in radical chemistry, along with a comparison of rate constants and Arrhenius parameters. Two tertiary thiol-based hydrogen atom transfer reagents, 3-(6-mercapto-6-methylheptyl)-1,2- dimethyl-3H-imidazolium tetrafluoroborate and 2-methyl-7-(2-methylimidazol-1-yl)heptane-2-thiol, have been synthesised. These are modelled on traditional thiol reagents, with a six-carbon chain with an imidazole ring on one end and tertiary thiol on the other. 3-(6-mercapto-6-methylheptyl)- 1,2-dimethyl-3H-imidazolium tetrafluoroborate comprises of a charged imidazolium ring, while 2- methyl-7-(2-methylimidazol-1-yl)heptane-2-thiol has an uncharged imidazole ring in order to probe the impact of salt formation on radical kinetics. The key step in the synthesis was addition of thioacetic acid across an alkene to generate a tertiary thioester, before deprotection with either LiAlH4 or aqueous NH3. Arrhenius plots were generated to give information on rate constants for H-atom transfer to a primary alkyl radical, the 5-hexenyl radical, in ethylmethylimidazolium bis(trifluoromethane)sulfonimide. -
O/C -O-O-( X, Generally Carried out at a Temperature in the Range of 20 and (B) Mineral Acid Salts of These Compounds
3,256,288 United States Patent Office Patented June 14, 1966 W 2 -Cl, -Br or -SONH2, with an appropriate imino ether 3,256,288 hydrochloride having the formula -SUBSTITUTED AMNOALKYL-2-ARYLOXY METHYLEBENZRADAZOLE COMPOUNDS E Clarence L. Moyle, Care, and Diomed M. Cher, Mid land, Mich., assignors to The Dow Chemical Company, Midland, Mich., a corporation of Delaware W (III) No Drawing. Fied May 24, 1962, Ser. No. 197,285 wherein in this and succeeding formulas, E is -H, -R, 9 Claims. (C. 260-294.7) -CI, -Br, -OH, -OR or -CONH2 and R' is a lower alkyl group, to produce the desired benzimidazole product This invention is directed to benzimidazole compounds, O and R'OH, NH3 and HCl by-products. The gaseous NH particularly (a) N-substituted benzimidazole compounds and HCl generally evolve from the reaction mixture al having the formula though some of the HC1 may react with NH and remain in the reaction mixture as ammonium chloride salt or may react with the basic benzimidazole product and remain 5 as the hydrochloride salt thereof. / N Y In carrying out the preparation, substantially equimolar proportions of the reactants are employed although either reactant may be employed in excess. The reaction is O/C -o-o-( x, generally carried out at a temperature in the range of 20 and (b) mineral acid salts of these compounds. In this from 60 to 82° C. for a period of from about 20 to 72 and succeeding formulas-NR'R'' is di(lower-alkyl)ami hours. It is preferred that an alcoholic solvent be em no, piperidino, morpholino or pyrrolidino; X is -H, ployed in this process. -
The Photochemistry of Tetramethyl-3-Thio-1,3-Cyclobutanedione
South Dakota State University Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange Electronic Theses and Dissertations 1972 The Photochemistry of tetramethyl-3-thio-1,3-cyclobutanedione Mason Ming-Sun Shen Follow this and additional works at: https://openprairie.sdstate.edu/etd Recommended Citation Shen, Mason Ming-Sun, "The Photochemistry of tetramethyl-3-thio-1,3-cyclobutanedione" (1972). Electronic Theses and Dissertations. 4833. https://openprairie.sdstate.edu/etd/4833 This Thesis - Open Access is brought to you for free and open access by Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. For more information, please contact [email protected]. THE PHarOCHEMISTRY OF TETRAMETHYL-3-THIO-l,J-CYCLOBUTANEDIONE BY MASON MING-SUN SHEN A thesis submitted in partial fulfillment of the requirements for tne degree Master of Science, Major - in Chemistry, South Dakota State University 1972 SOUTH DAKOTA STATE UNIVERSITY LIBRAR fer -th:Ls -7 - - -- -07 - D;;;/:...; TO MY PARENTS PHOTOCHEMISTRY OF THE TETRAMETHYL-)-THI0-1,)-CYCLOBUTANEDIONE Abstract MASON MING-SUN SHEN Under the supervision of Professor James J. Worman photochemical reaction of tetramethyl-3-thio-i.l,3-cyclo The butanedione in the presence of oxygen and light yields tetramethyl-1, )-cyclobutanedione and sulfur dioxide. kinetics and mechanism of the reaction have been studied The thoroughly in different solvents and at different concentrations. Results this study indicate that the mechanism probably involves· of singlet oxygen and state thione although triplet thione and ground triplet xygen are not completely eliminated. -
Oxygen - Wikipedia
5/20/2020 Oxygen - Wikipedia Oxygen Oxygen is the chemical element with the symbol O and atomic number 8. It is a member of the chalcogen group in Oxygen, 8O the periodic table, a highly reactive nonmetal, and an oxidizing agent that readily forms oxides with most elements as well as with other compounds. After hydrogen and helium, oxygen is the third-most abundant element in the universe by mass. At standard temperature and pressure, two atoms of the element bind to form dioxygen, a colorless and odorless diatomic gas with the formula O2. Diatomic oxygen gas constitutes 20.95% of the Earth's atmosphere. As compounds including oxides, the element makes up almost half of the Earth's crust.[2] Liquid oxygen boiling Dioxygen provides the energy released in combustion[3] and Oxygen aerobic cellular respiration,[4] and many major classes of Allotropes O2, O3 (ozone) organic molecules in living organisms contain oxygen atoms, such as proteins, nucleic acids, carbohydrates, and fats, as do Appearance gas: colorless the major constituent inorganic compounds of animal shells, liquid and solid: pale teeth, and bone. Most of the mass of living organisms is blue oxygen as a component of water, the major constituent of Standard atomic [15.999 03, 15.999 77] lifeforms. Oxygen is continuously replenished in Earth's weight A (O) conventional: 15.999 atmosphere by photosynthesis, which uses the energy of r, std sunlight to produce oxygen from water and carbon dioxide. Oxygen in the periodic table Oxygen is too chemically reactive to remain a free element in H H – air without being continuously replenished by the LB BCNOFN ↑ SM ASPSCA photosynthetic action of living organisms. -
Inorganic Chemistry/Chemical Bonding/MO Diagram 1
Inorganic Chemistry/Chemical Bonding/MO Diagram 1 Inorganic Chemistry/Chemical Bonding/MO Diagram A molecular orbital diagram or MO diagram for short is a qualitative descriptive tool explaining chemical bonding in molecules in terms of molecular orbital theory in general and the Linear combination of atomic orbitals molecular orbital method (LCAO method) in particular [1] [2] [3] . This tool is very well suited for simple diatomic molecules such as dihydrogen, dioxygen and carbon monoxide but becomes more complex when discussing polynuclear molecules such as methane. It explains why some molecules exist and not others, how strong bonds are, and what electronic transitions take place. Dihydrogen MO diagram The smallest molecule, hydrogen gas exists as dihydrogen (H-H) with a single covalent bond between two hydrogen atoms. As each hydrogen atom has a single 1s atomic orbital for its electron, the bond forms by overlap of these two atomic orbitals. In figure 1 the two atomic orbitals are depicted on the left and on the right. The vertical axis always represents the orbital energies. The atomic orbital energy correlates with electronegativity as a more electronegative atom holds an electron more tightly thus lowering its energy. MO treatment is only valid when the atomic orbitals have comparable energy; when they differ greatly the mode of bonding becomes ionic. Each orbital is singly occupied with the up and down arrows representing an electron. The two AO's can overlap in two ways depending on their phase relationship. The phase of an orbital is a direct consequence of the oscillating, wave-like properties of electrons. -
Radical Cyclization in Heterocycle Synthesis. 12.1) Sulfanyl Radical
February 2001 Chem. Pharm. Bull. 49(2) 213—224 (2001) 213 Radical Cyclization in Heterocycle Synthesis. 12.1) Sulfanyl Radical Addition–Addition–Cyclization (SRAAC) of Unbranched Diynes and Its Application to the Synthesis of A-Ring Fragment of 1a,25-Dihydroxyvitamin D3 Okiko MIYATA, Emi NAKAJIMA, and Takeaki NAITO* Kobe Pharmaceutical University, Motoyamakita, Higashinada, Kobe 658–8558, Japan. Received September 25, 2000; accepted October 24, 2000 Sulfanyl radical addition–addition–cyclization (SRAAC) of unbranched diynes proceeded smoothly to give cyclized exo-olefins, while the sulfanyl radical addition–cyclization–addition (SRACA) of diynes having a quater- nary carbon gave cyclized endo-olefins. This method was successfully applied to the synthesis of A-ring fragment of 1a,25-dihydroxyvitamin D3. Key words sulfanyl radical; addition–addition–cyclization; diyne; alkylidenecyclopentane; alkylidenecyclohexane; vitamin D Radical cyclization is a useful method for the preparation ther a quaternary carbon or a heteroatom, sulfanyl radical ad- of various cyclic compounds.1) Recently, this method in dition–cyclization–addition (SRACA) occurred to give endo- 5 5 which carbon centered radical species are generated by the olefin 3. In the case of longer carbon chain, 1 (n 2, X CH2, addition reaction of a radical to a multiple bond has drawn C(COOMe)2) gave exo-olefin 2 as the major product, while 1 5 5 the attention of synthetic chemists because of its several ad- (n 2, X NSO2Ar) gave a complex mixture. Synthetic util- vantages, such as readily available starting substrate and for- ity of newly found SRAAC has been proved by a novel syn- mation of functionalized products. -
[(4-Chlorophenyl) Sulfanyl] Ethoxy- 3-Methoxy-5-[5-(3,4,5-Trimethoxyphenyl)-2-Furyl]Benzonitrile
Available online a t www.derpharmachemica.com Scholars Research Library Der Pharma Chemica, 2015, 7(3):242-247 (http://derpharmachemica.com/archive.html) ISSN 0975-413X CODEN (USA): PCHHAX Synthesis and antibacterial activity of 2-2-[(4-chlorophenyl) sulfanyl] ethoxy- 3-methoxy-5-[5-(3,4,5-trimethoxyphenyl)-2-furyl]benzonitrile P. Veerabhadra Swamy*a,b , K. B. Chandrasekhar c and Pullaiah China Kambhampati a aLaxai Avanti Life Sciences, Lab#9, ICICI Knowledge park, Shameerpet, Turkapally Village, Hyderabad bDepartment of Chemistry, Jawaharlal Nehru Technological University, Hyderabad, Hyderabad, Telengana, India cDepartment of Chemistry, Jawaharlal Nehru Technological University, Anantapur, Anantapuramu, A.P., India _____________________________________________________________________________________________ ABSTRACT The present paper describes the synthesis and of (2-(4-chlorophenylthio)ethoxy)-3-methoxy-5-(5-(3,4,5- trimethoxyphenyl)furan-2-yl)benzonitrile from commercially available vanillin and 3,4,5-trimethoxy acetophenone as starting materials utilizing green reagents and solvents. The antibacterial test results indicated that the title compound displayed excellent activity against both Gram-positive bacteria (Staphylococcus aureus and Bacillus cereus) and Gram-negative bacteria: (Escherichia Coli and Pseudomonas aeruginosa). Keywords: Antibacterial activity, Furan, 3,4,5-trimethoxy acetophenone, vanillin, synthesis _____________________________________________________________________________________________ INTRODUCTION Furan derivatives -
United States Patent (19) 11) Patent Number: 4,731,479 Bod Et Al
United States Patent (19) 11) Patent Number: 4,731,479 Bod et al. 45 Date of Patent: Mar. 15, 1988 (54) N-SULFAMYL-3-HALOPROPIONAMIDINES Attorney, Agent, or Firm-Karl F. Ross; Herbert Dubno; 75 Inventors: Péter Bod, Gyömrö; Kálmán Jonathan Myers Harsányi, Budapest; Eva Againée (57) ABSTRACT Csongor, Budapest; Erik Bogsch, Budapest; Eva Fekecs, Budapest; The invention relates to new propionamidine deriva Ferenc Trischler, Budapest; György tives of formula (I) Domány, Budapest; István Szabadkai, Budapest; Béla Hegedis, Budapest, NH2HX (I) all of Hungary x^-sn-so- NH2 73) Assignee: Richter Gedeon Vegyeszeti Gyar Rt., Budapest, Hungary wherein (21) Appl. No.: 905,833 X is halogen, and to a process for their preparation. According to the 22 Filed: Sep. 10, 1986 invention compounds of the formula (I) are prepared by 30 Foreign Application Priority Data reacting a 3-halopropionitrile of the formula (III) Sep. 11, 1985 HU) Hungary .............................. 3423/85 51) Int. Cl." ............................................ CO7C 143/72 (III) 52 U.S.C. ...................................................... 564/79 58 Field of Search .......................................... 564/79 wherein (56) References Cited X is as defined above, U.S. PATENT DOCUMENTS with sulfamide of the formula (II) 3,121,084 2/1964 Winberg................................ 564/79 (II) FOREIGN PATENT DOCUMENTS 905408 12/1986 Belgium. NH-i-NH. O OTHER PUBLICATIONS Wagner et al, "Synthetic Organic Chemistry', (1953), in the presence of a hydrogen halide. p. 635. Compounds of the formula (I) are useful intermediates Richter, "Text Book of Organic Chemistry,” (1952), p. 216. in the preparation of famotidine. Primary Examiner-Anton H. Sutto 1 Claim, No Drawings 4,731,479 1. -
Supramolecular Control of Singlet Oxygen Generation
molecules Review Supramolecular Control of Singlet Oxygen Generation Akshay Kashyap 1, Elamparuthi Ramasamy 2, Vijayakumar Ramalingam 3 and Mahesh Pattabiraman 1,* 1 Department of Chemistry, University of Nebraska Kearney, Kearney, NE 68849, USA; [email protected] 2 Department of Chemistry and Biochemistry, The University of Texas at Arlington, Arlington, TX 76019, USA; [email protected] 3 Department of Biology and Chemistry, SUNY Polytechnic Institute, Utica, NY 13502, USA; [email protected] * Correspondence: [email protected] 1 Abstract: Singlet oxygen ( O2) is the excited state electronic isomer and a reactive form of molecu- lar oxygen, which is most efficiently produced through the photosensitized excitation of ambient triplet oxygen. Photochemical singlet oxygen generation (SOG) has received tremendous attention historically, both for its practical application as well as for the fundamental aspects of its reactivity. Applications of singlet oxygen in medicine, wastewater treatment, microbial disinfection, and syn- thetic chemistry are the direct results of active past research into this reaction. Such advancements were achieved through design factors focused predominantly on the photosensitizer (PS), whose photoactivity is relegated to self-regulated structure and energetics in ground and excited states. However, the relatively new supramolecular approach of dictating molecular structure through non-bonding interactions has allowed photochemists to render otherwise inactive or less effective 1 PSs as efficient O2 generators. This concise and first of its kind review aims to compile progress in SOG research achieved through supramolecular photochemistry in an effort to serve as a refer- ence for future research in this direction. The aim of this review is to highlight the value in the Citation: Kashyap, A.; Ramasamy, E.; supramolecular photochemistry approach to tapping the unexploited technological potential within Ramalingam, V.; Pattabiraman, M.