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JASP: Graphical Statistical Software for Common Statistical Designs
JSS Journal of Statistical Software January 2019, Volume 88, Issue 2. doi: 10.18637/jss.v088.i02 JASP: Graphical Statistical Software for Common Statistical Designs Jonathon Love Ravi Selker Maarten Marsman University of Newcastle University of Amsterdam University of Amsterdam Tahira Jamil Damian Dropmann Josine Verhagen University of Amsterdam University of Amsterdam University of Amsterdam Alexander Ly Quentin F. Gronau Martin Šmíra University of Amsterdam University of Amsterdam Masaryk University Sacha Epskamp Dora Matzke Anneliese Wild University of Amsterdam University of Amsterdam University of Amsterdam Patrick Knight Jeffrey N. Rouder Richard D. Morey University of Amsterdam University of California, Irvine Cardiff University University of Missouri Eric-Jan Wagenmakers University of Amsterdam Abstract This paper introduces JASP, a free graphical software package for basic statistical pro- cedures such as t tests, ANOVAs, linear regression models, and analyses of contingency tables. JASP is open-source and differentiates itself from existing open-source solutions in two ways. First, JASP provides several innovations in user interface design; specifically, results are provided immediately as the user makes changes to options, output is attrac- tive, minimalist, and designed around the principle of progressive disclosure, and analyses can be peer reviewed without requiring a “syntax”. Second, JASP provides some of the recent developments in Bayesian hypothesis testing and Bayesian parameter estimation. The ease with which these relatively complex Bayesian techniques are available in JASP encourages their broader adoption and furthers a more inclusive statistical reporting prac- tice. The JASP analyses are implemented in R and a series of R packages. Keywords: JASP, statistical software, Bayesian inference, graphical user interface, basic statis- tics. -
Membrane Disrupting Antimicrobial Peptide Dendrimers with Multiple Amino Termini
Electronic Supplementary Material (ESI) for Medicinal Chemistry Communications This journal is © The Royal Society of Chemistry 2011 S1 Supporting Information for: Membrane disrupting antimicrobial peptide dendrimers with multiple amino termini Michaela Stach, a) Noélie Maillard, a) Rameshwar U. Kadam, a) David Kalbermatter, a) Marcel Meury,b) Malcolm G. P. Page, c) Dimitrios Fotiadis, b) Tamis Darbre and Jean-Louis Reymond a) * a) Department of Chemistry and Biochemistry, University of Berne, Freiestrasse 3, CH-3012 Berne Fax: + 41 31 631 80 57; Tel: +41 31 631 43 25, e-mail: [email protected] b) Institute of Biochemistry and Molecular Medicine, University of Berne, Bühlstrasse 28, 3012 Berne, Switzerland c) Basilea Pharmaceutica International Ltd. Table of Contents MATERIAL AND REAGENTS ....................................................................................................................................... 2 COMBINATORIAL LIBRARY ........................................................................................................................................ 3 Library synthesis ................................................................................................................................................. 3 Bead diffusion assay............................................................................................................................................ 3 Sequence determination...................................................................................................................................... -
Security Systems Services World Report
Security Systems Services World Report established in 1974, and a brand since 1981. www.datagroup.org Security Systems Services World Report Database Ref: 56162 This database is updated monthly. Security Systems Services World Report SECURITY SYSTEMS SERVICES WORLD REPORT The Security systems services Report has the following information. The base report has 59 chapters, plus the Excel spreadsheets & Access databases specified. This research provides World Data on Security systems services. The report is available in several Editions and Parts and the contents and cost of each part is shown below. The Client can choose the Edition required; and subsequently any Parts that are required from the After-Sales Service. Contents Description ....................................................................................................................................... 5 REPORT EDITIONS ........................................................................................................................... 6 World Report ....................................................................................................................................... 6 Regional Report ................................................................................................................................... 6 Country Report .................................................................................................................................... 6 Town & Country Report ...................................................................................................................... -
Community Notebook
Community Notebook Free Software Projects Projects on the Move Who says statistics have to be a nightmare? Also in this issue: After the Deadline takes care of language issues. By Carsten Schnober and Heike Jurzik Jan Prchal, 123RF ven hardened nerds are often over-challenged by the less than intuitive field of statistics. Besides the theory, you Kheng123RF Ho Toh, need to know how to use the software that converts all Ethe theory into a practical application. The R environment [1] can be a big help on the software side. This free implementation of the S statistics programming lan- guage was launched in 1992. Initially, you will not be able to do much with R and its spartan command-line tools until you learn the language. Although SPSS [2] is a commercial alternative, even students are asked to pay a three-digit licensing fee, and the quality isn’t always on par with R. Sofa Statistics for All Free statistics software with an intuitive web interface is a niche that the Sofa (Statistics Open For All) [3] project fills. One of the project’s aims is to give statisticians an easy-to-use tool. Like many other mathematical disciplines, statistics is an ancillary science that is used in many areas to interpret empiric surveys. For example, you can use a series of results to calcu- late the probability of dice throws. Social scientists can also forecast whether a survey is significant or will just output random values. Many statistical tests have different strengths and weaknesses that only specialists can assess. -
O4 EN Nowy.Pdf
Authors: Agata Goździk, Dagmara Bożek, Karolina Chodzińska, Jesús Clemente, María Clemente, Alexia Micallef Gatt, Antonija Grizelj, Despoina Mitropoulou, Kostas Papadimas, Anita Simac, Franca Sormani, Mieke Sterken, Contributors: Institute of Geophysiscs, Polish Academy of Sciences Please cite this publication as: Goździk, A. et al (2021). BRITEC Citizen Science Toolkit. BRITEC report. March 2021, Institute of Geophysics PAS, Poland Keywords: Science, Technology, Engineering and Mathematics (STEM); Citizen Science; Participatory Science; School Education, research ethics Design/DTP: Mattia Gentile This report is published under the terms and conditions of the Attribution 4.0 International (CC BY 4.0) (https://creativecommons.org/licenses/by/4.0/). This report was produced within the project BRITEC: Bringing Research into the Classroom and has been funded with support from the European Commission within ERASMUS+ Programme, and corresponds to Output 4 of the project. This report reflects the views only of the authors, and FRSE and the European Commission cannot be held responsible for any use which may be made of the information contained therein. 1 Table of contents Executive summary ................................................................................................................................. 3 Introduction to Citizen Science ............................................................................................................... 4 Citizen Science Tools .............................................................................................................................. -
Zirconium Compounds 224 200 Countries
Zirconium Compounds Markets 224 Companies 200 Countries Worldwide Since 1983 www.datagroup.org Zirconium Compounds Zirconium Compounds Zirconium Compounds The Market report is an extract of the main database and provides a number of limited datasets for each of the countries covered. For users needing more information, detailed data on Zirconium Compounds is available in several Editions and Database versions. Users can order (at a discount) any other Editions, or the full Database version, as required from the After-Sales Service or from any Dealer. This research provides Market data for Zirconium compounds. Contents Market Report ................................................................................................................................................................ 4 Market Data in US$ .................................................................................................................................................... 4 Report Description ..................................................................................................................................................... 5 Contents ..................................................................................................................................................................... 9 Countries Covered ................................................................................................................................................... 12 Market Notes & Definitions ..................................................................................................................................... -
Cumulation of Poverty Measures: the Theory Beyond It, Possible Applications and Software Developed
Cumulation of Poverty measures: the theory beyond it, possible applications and software developed (Francesca Gagliardi and Giulio Tarditi) Siena, October 6th , 2010 1 Context and scope Reliable indicators of poverty and social exclusion are an essential monitoring tool. In the EU-wide context, these indicators are most useful when they are comparable across countries and over time. Furthermore, policy research and application require statistics disaggregated to increasingly lower levels and smaller subpopulations. Direct, one-time estimates from surveys designed primarily to meet national needs tend to be insufficiently precise for meeting these new policy needs. This is particularly true in the domain of poverty and social exclusion, the monitoring of which requires complex distributional statistics – statistics necessarily based on intensive and relatively small- scale surveys of households and persons. This work addresses some statistical aspects relating to improving the sampling precision of such indicators in EU countries, in particular through the cumulation of data over rounds of regularly repeated national surveys. 2 EU-SILC The reference data for this purpose are EU Statistics on Income and Living Conditions, the major source of comparative statistics on income and living conditions in Europe. A standard integrated design has been adopted by nearly all EU countries. It involves a rotational panel, with a new sample of households and persons introduced each year to replace one-fourth of the existing sample. Persons enumerated in each new sample are followed-up in the survey for four years. The design yields each year a cross- sectional sample, as well as longitudinal samples of 2, 3 and 4 year duration. -
Catering Services World Market Database Report & Database
Catering Services World Market Database Report & Database established in 1974, and a brand since 1981. www.datagroup.org Catering Services Database Ref: W2811_L This database is updated monthly. Catering Services World Market Database Report & Database CATERING SERVICES REPORT The Catering services Report & Database has the following information. The base report has 59 chapters, plus the Excel spreadsheets & Access databases specified. This research provides World Market Database on Catering services. The report is available in several Editions and Parts and the contents and cost of each part is shown below. The Client can choose the Edition required; and subsequently any Parts that are required from the After-Sales Service. Contents Description ....................................................................................................................................... 5 Coverage ......................................................................................................................................... 8 REPORT EDITIONS ......................................................................................................................... 12 World Report & Database.................................................................................................................. 12 Regional Report & Database ............................................................................................................. 12 Country Report & Database ............................................................................................................. -
Package 'Boral'
Package ‘boral’ March 12, 2021 Title Bayesian Ordination and Regression AnaLysis Version 2.0 Date 2021-04-01 Author Francis K.C. Hui [aut, cre], Wade Blanchard [aut] Maintainer Francis K.C. Hui <[email protected]> Description Bayesian approaches for analyzing multivariate data in ecology. Estimation is per- formed using Markov Chain Monte Carlo (MCMC) methods via Three. JAGS types of mod- els may be fitted: 1) With explanatory variables only, boral fits independent column General- ized Linear Models (GLMs) to each column of the response matrix; 2) With latent vari- ables only, boral fits a purely latent variable model for model-based unconstrained ordina- tion; 3) With explanatory and latent variables, boral fits correlated column GLMs with la- tent variables to account for any residual correlation between the columns of the response matrix. License GPL-2 Depends coda Imports abind, corpcor, fishMod, graphics, grDevices, lifecycle, MASS, mvtnorm, R2jags, reshape2, stats Suggests mvabund (>= 4.0.1), corrplot NeedsCompilation no R topics documented: boral-package . .2 about.distributions . .3 about.lvs . .6 about.ranefs . .8 about.ssvs . 10 about.traits . 14 boral . 17 calc.condlogLik . 33 calc.logLik.lv0 . 37 calc.marglogLik . 40 1 2 boral-package calc.varpart . 44 coefsplot . 48 create.life . 51 ds.residuals . 59 fitted.boral . 61 get.dic . 63 get.enviro.cor . 64 get.hpdintervals . 66 get.mcmcsamples . 70 get.measures . 71 get.more.measures . 75 get.residual.cor . 79 lvsplot . 82 make.jagsboralmodel . 85 make.jagsboralnullmodel . 90 plot.boral . 95 predict.boral . 97 ranefsplot . 103 summary.boral . 105 tidyboral . 106 Index 110 boral-package Bayesian Ordination and Regression AnaLysis (boral) Description Bayesian approaches for analyzing multivariate data in ecology. -
Boral’ January 2, 2017 Title Bayesian Ordination and Regression Analysis Version 1.2 Date 2017-01-10 Author Francis K.C
Package ‘boral’ January 2, 2017 Title Bayesian Ordination and Regression AnaLysis Version 1.2 Date 2017-01-10 Author Francis K.C. Hui Maintainer Francis Hui <[email protected]> Description Bayesian approaches for analyzing multivariate data in ecology. Estimation is per- formed using Markov Chain Monte Carlo (MCMC) methods via JAGS. Three types of mod- els may be fitted: 1) With explanatory variables only, boral fits independent col- umn GLMs to each column of the response matrix; 2) With latent variables only, bo- ral fits a purely latent variable model for model-based unconstrained ordination; 3) With explana- tory and latent variables, boral fits correlated column GLMs with latent variables to ac- count for any residual correlation between the columns of the response matrix. License GPL-2 Depends coda Imports R2jags, mvtnorm, fishMod, MASS, stats, graphics, grDevices, abind Suggests mvabund (>= 3.8.4), corrplot NeedsCompilation no Repository CRAN Date/Publication 2017-01-02 22:22:18 R topics documented: boral-package . .2 about.distributions . .3 about.ssvs . .5 about.traits . .8 boral . 10 calc.condlogLik . 23 calc.logLik.lv0 . 26 calc.marglogLik . 29 coefsplot . 33 1 2 boral-package create.life . 35 ds.residuals . 40 fitted.boral . 42 get.dic . 43 get.enviro.cor . 45 get.hpdintervals . 46 get.measures . 49 get.more.measures . 52 get.residual.cor . 56 lvsplot . 58 make.jagsboralmodel . 61 make.jagsboralnullmodel . 65 plot.boral . 70 summary.boral . 72 Index 74 boral-package Bayesian Ordination and Regression AnaLysis (boral) Description boral is a package offering Bayesian model-based approaches for analyzing multivariate data in ecology. Estimation is performed using Bayesian/Markov Chain Monte Carlo (MCMC) methods via JAGS (Plummer, 2003). -
Thesis Submitted for the Degree of Doctor of Philosophy
University of Bath PHD Self-assembled peptide hydrogels Johnson, Eleanor Award date: 2011 Awarding institution: University of Bath Link to publication Alternative formats If you require this document in an alternative format, please contact: [email protected] General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal ? Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Download date: 09. Oct. 2021 SELF-ASSEMBLED PEPTIDE HYDROGELS Eleanor Johnson A Thesis Submitted for the degree of Doctor of Philosophy University of Bath Department of Chemistry December 2011 COPYRIGHT Attention is drawn to the fact that copyright of this thesis rests with the author. A copy of this thesis has been supplied on condition that anyone who consults it is understood to recognise that its copyright rests with the author and that they must not copy it or use material from it except as permitted by law or with the consent of the author. -
Rcommander Tinn-R Microsoft R Open & R Server R GUI
Vol. 24, No.1 (January to March 2017) RCommander Tinn-R Microsoft R Open & R Server R GUI R: An Open Source Software Environment for Statistical Analysis Yatrik Patel1, Divyakant Vaghela2, Hitesh Solanki3 and Mitisha Vaidya4 1 Scientist D (CS),2,3 Scientist B (CS), 4 Project Officer (CS) IndCat N-LIST (E-resources for College) http://indcat.inflibnet.ac.in/ http://nilst.inflibnet.ac.in/ SOUL Helpline Open Journal Access System (OJAS) Tel. : +91-79-23268300 http://www.inflibnet.ac.in/ojs/ VIDWAN Shodhganga http://vidwan.inflibnet.ac.in/ http://shodhganga.inflibnet.ac.in/ e-ShodhSindhu ICT Skill Development Programmes http://ess.inflibnet.ac.in/ https://www.inflibnet.ac.in/hrd/ e-PG Pathshala Vidya-Mitra: Integrated e-content Portal http://epgp.inflibnet.ac.in/ http://vidyamitra.inflibnet.ac.in/ INFLIBNET’s Institutional Repositary InfiStats: Usage Statistics Portal for e-Resource http://ir.inflibnet.ac.in/ https://www.inflibnet.ac.in/infistat/ 1 From Director's Desk 3 Training Programme on SOUL 2.0, INFLIBNET Centre, Gandhinagar 4 INFLIBNET Regional Training Programme on Library Automation (IRTPLA) INFLIBNET Regional Training Programme on Library Automation, Mohanlal Sukhdia University, Udaipur, 20th-24th February, 2017 INFLIBNET Regional Training Programme on Library Automation, Calcutta University, Kolkata, 28th March-1st April, 2017 5 Specialized Training Programmes/National Workshops/ National Conferences Five-day Training Programme on Creation and management of Digital Collections using DSpace, INFLIBNET Centre, Gandhinagar, 30th