Phylogenetic Relationships in the Order Ericales S.L.: Analyses of Molecular Data from Five Genes from the Plastid and Mitochondrial Genomes1
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Cytomorphological Diversity in Some Species of Impatiens Linn. (Balsaminaceae) from Western Himalayas (India)
© 2010 The Japan Mendel Society Cytologia 75(4): 379–387, 2010 Cytomorphological Diversity in Some Species of Impatiens Linn. (Balsaminaceae) from Western Himalayas (India) Syed Mudassir Jeelani*, Savita Rani, Sanjeev Kumar, Raghbir Chand Gupta and Santosh Kumari Department of Botany, Punjabi University, Patiala 147 002, India Received May 28, 2010; accepted August 28, 2010 Summary The genus Impatiens Linn. belongs to the family Balsaminaceae and includes mostly wild as well as commonly cultivated ornamental plants. Nearly 91% of Indian species of Impatiens are reported to be endemic. To generate basic information on genetic diversity required for the improvement of germplasm, the present study has been carried out from the different selected parts of Western Himalayas such as Kashmir (J&K) and the Kangra and Sirmaur districts (H.P). During this study, 23 accessions belonging to 9 species of the genus Impatiens have been cytomorphologi- cally observed. The species being cytologically worked out for the first time on a worldwide basis include 2 species as I.laxiflora (nϭ7, 8) and I. reidii (nϭ7). Six aneuploid cytotypes have been reported for the first time for the species I. arguta (nϭ7), I. bicornuta (nϭ7), I. brachycentra (nϭ8), I. glandulifera (nϭ6), I. scabrida (nϭ6) and I. sulcata (nϭ8) on a worldwide basis. The meiotic course in most of these accessions has been observed to be normal except for some of the accessions of I. brachycentra, I. glandulifera, I. scabrida and I. sulcata marked with abnormal meiosis. Out of 4 species (6 accessions) marked with cytomixis, in 2 accessions, one for each of I. scabrida and I. -
Biosphere Consulting 14908 Tilden Road ‐ Winter Garden FL 34787 (407) 656 8277
Biosphere Consulting 14908 Tilden Road ‐ Winter Garden FL 34787 (407) 656 8277 www.BiosphereNursery.com The following list of plants include only native wetland and transitional species used primarily in aquascaping, lakefront and wetland restoration. Biosphere also carries a large number of upland species and BIOSCAPE species, as well as wildflower seeds and plants. The nursery is open to the public on Tuesday through Saturday only from 9:00 A.M. until 5:00 P.M. Prices are F.O.B. the nursery. * Bare root plants must be ordered at least two (2) days prior to pick-up. PRICE LIST NATIVE WETLAND AND TRANSITIONAL SPECIES HERBACEOUS SPECIES *Bare Root 1 Gal. 3 Gal. Arrowhead (Sagittaria latifolia) .50 2.50 --- Bulrush (Scirpus californicus & S.validus) .50 --- 8.00 Burrmarigold (Bidens leavis) --- 2.00 --- Canna (Canna flaccida) .60 2.00 --- Crinum (Crinum americanum) 1.50 3.00 10.00 Duck Potato (Sagittaria lancifolia) .60 2.00 --- Fragrant Water Lily (Nymphaea odorata) 5.00 --- 12.00 Hibiscus (Hibiscus coccinea) --- 3.00 8.00 Horsetail (Equisetum sp.) .80 2.00 --- Iris (Iris savannarum) .60 2.00 --- Knotgrass (Paspalum distichum) .50 2.00 --- Lemon Bacopa (Bacopa caroliniana) --- 3.50 --- Lizards Tail (Saururus cernuus) .60 2.50 --- Maidencane (Panicum hemitomon) .50 2.00 --- Pickerelweed (Pontederia cordata) .50 2.00 --- Redroot (Lachnanthes carolinana) .60 2.00 --- Sand Cord Grass (Spartina bakeri) .50 3.50 --- Sawgrass (Cladium jamaicense) .60 3.00 --- Softrush (Juncus effusus) .50 2.00 --- Spikerush (Eleocharis cellulosa) .70 2.00 --- -
Impatiens Glandulifera (Himalayan Balsam) Chloroplast Genome Sequence As a Promising Target for Populations Studies
Impatiens glandulifera (Himalayan balsam) chloroplast genome sequence as a promising target for populations studies Giovanni Cafa1, Riccardo Baroncelli2, Carol A. Ellison1 and Daisuke Kurose1 1 CABI Europe, Egham, Surrey, UK 2 University of Salamanca, Instituto Hispano-Luso de Investigaciones Agrarias (CIALE), Villamayor (Salamanca), Spain ABSTRACT Background: Himalayan balsam Impatiens glandulifera Royle (Balsaminaceae) is a highly invasive annual species native of the Himalayas. Biocontrol of the plant using the rust fungus Puccinia komarovii var. glanduliferae is currently being implemented, but issues have arisen with matching UK weed genotypes with compatible strains of the pathogen. To support successful biocontrol, a better understanding of the host weed population, including potential sources of introductions, of Himalayan balsam is required. Methods: In this molecular study, two new complete chloroplast (cp) genomes of I. glandulifera were obtained with low coverage whole genome sequencing (genome skimming). A 125-year-old herbarium specimen (HB92) collected from the native range was sequenced and assembled and compared with a 2-year-old specimen from UK field plants (HB10). Results: The complete cp genomes were double-stranded molecules of 152,260 bp (HB92) and 152,203 bp (HB10) in length and showed 97 variable sites: 27 intragenic and 70 intergenic. The two genomes were aligned and mapped with two closely related genomes used as references. Genome skimming generates complete organellar genomes with limited technical and financial efforts and produces large datasets compared to multi-locus sequence typing. This study demonstrates the 26 July 2019 Submitted suitability of genome skimming for generating complete cp genomes of historic Accepted 12 February 2020 Published 24 March 2020 herbarium material. -
Buzz-Pollination and Patterns in Sexual Traits in North European Pyrolaceae Author(S): Jette T
Buzz-Pollination and Patterns in Sexual Traits in North European Pyrolaceae Author(s): Jette T. Knudsen and Jens Mogens Olesen Reviewed work(s): Source: American Journal of Botany, Vol. 80, No. 8 (Aug., 1993), pp. 900-913 Published by: Botanical Society of America Stable URL: http://www.jstor.org/stable/2445510 . Accessed: 08/08/2012 10:49 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. Botanical Society of America is collaborating with JSTOR to digitize, preserve and extend access to American Journal of Botany. http://www.jstor.org American Journalof Botany 80(8): 900-913. 1993. BUZZ-POLLINATION AND PATTERNS IN SEXUAL TRAITS IN NORTH EUROPEAN PYROLACEAE1 JETTE T. KNUDSEN2 AND JENS MOGENS OLESEN Departmentof ChemicalEcology, University of G6teborg, Reutersgatan2C, S-413 20 G6teborg,Sweden; and Departmentof Ecology and Genetics,University of Aarhus, Ny Munkegade, Building550, DK-8000 Aarhus,Denmark Flowerbiology and pollinationof Moneses uniflora, Orthilia secunda, Pyrola minor, P. rotundifolia,P. chlorantha, and Chimaphilaumbellata are describedand discussedin relationto patternsin sexualtraits and possibleevolution of buzz- pollinationwithin the group. The largenumber of pollengrains are packedinto units of monadsin Orthilia,tetrads in Monesesand Pyrola,or polyadsin Chimaphila.Pollen is thesole rewardto visitinginsects except in thenectar-producing 0. -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Alphabetical Lists of the Vascular Plant Families with Their Phylogenetic
Colligo 2 (1) : 3-10 BOTANIQUE Alphabetical lists of the vascular plant families with their phylogenetic classification numbers Listes alphabétiques des familles de plantes vasculaires avec leurs numéros de classement phylogénétique FRÉDÉRIC DANET* *Mairie de Lyon, Espaces verts, Jardin botanique, Herbier, 69205 Lyon cedex 01, France - [email protected] Citation : Danet F., 2019. Alphabetical lists of the vascular plant families with their phylogenetic classification numbers. Colligo, 2(1) : 3- 10. https://perma.cc/2WFD-A2A7 KEY-WORDS Angiosperms family arrangement Summary: This paper provides, for herbarium cura- Gymnosperms Classification tors, the alphabetical lists of the recognized families Pteridophytes APG system in pteridophytes, gymnosperms and angiosperms Ferns PPG system with their phylogenetic classification numbers. Lycophytes phylogeny Herbarium MOTS-CLÉS Angiospermes rangement des familles Résumé : Cet article produit, pour les conservateurs Gymnospermes Classification d’herbier, les listes alphabétiques des familles recon- Ptéridophytes système APG nues pour les ptéridophytes, les gymnospermes et Fougères système PPG les angiospermes avec leurs numéros de classement Lycophytes phylogénie phylogénétique. Herbier Introduction These alphabetical lists have been established for the systems of A.-L de Jussieu, A.-P. de Can- The organization of herbarium collections con- dolle, Bentham & Hooker, etc. that are still used sists in arranging the specimens logically to in the management of historical herbaria find and reclassify them easily in the appro- whose original classification is voluntarily pre- priate storage units. In the vascular plant col- served. lections, commonly used methods are systema- Recent classification systems based on molecu- tic classification, alphabetical classification, or lar phylogenies have developed, and herbaria combinations of both. -
William Wayt Thomas1,2 & Melissa Tulig1
Rodriguésia 66(4): 983-987. 2015 http://rodriguesia.jbrj.gov.br DOI: 10.1590/2175-7860201566404 Hard Copy to Digital: Flora Neotropica and the World Flora Online William Wayt Thomas1,2 & Melissa Tulig1 Abstract One of the greatest challenges in achieving the goals of the World Flora Online (WFO) will be to make available the huge amount of botanical information that is not yet available digitally. The New York Botanical Garden is using the Flora Neotropica monograph series as a model for digitization. We describe our efforts at digitizing Flora Neotropica monographs and why digitization of hardcopy descriptions must be a priority for the WFO project. Key words: Electronic monographs, open access, Flora Neotropica, monographs. Resumo Um dos maiores desafios para alcançar as metas do projeto World Flora Online (WFO), será a disponibilizar a enorme quantidade de informações botânicas que ainda não estão disponíveis digitalmente. O New York Botanical Garden está utilizando a série de monografias da Flora Neotropica como um modelo para a digitalização. Nós aqui descrevemos nossos esforços na digitalização das monografias da Flora Neotropica e porque a digitalização das descrições impressas deve ser uma prioridade para o projeto WFO. Palavras-chave: Monografias eletrônicas, open access, Flora Neotropica, monografias. Introduction is called the World Flora Online (WFO). This consortium of professionals will create open- The World Flora Online (WFO) was access one-stop searching of world flora with developed as part of the United Nation’s Global verified information, including new and previously Strategy for Plant Conservation with the goal of published data, and coordinated with links to other providing “an online flora of all known plants,” One plant database and catalog Web sites. -
Plant Succession on Burned Areas in Okefenokee Swamp Following the Fires of 1954 and 1955 EUGENE CYPERT Okefenokee National Wildlife Refuge U.S
Plant Succession on Burned Areas in Okefenokee Swamp Following the Fires of 1954 and 1955 EUGENE CYPERT Okefenokee National Wildlife Refuge U.S. Bureau of Sport Fisheries and 'Wildlife Waycross, GA 31501 INTRODUCTION IN 1954 and 1955, during an extreme drought, five major fires occurred in Okefenokee Swamp. These fires swept over approximately 318,000 acres of the swamp and 140,000 acres of the adjacent upland. In some areas in the swamp, the burning was severe enough to kill most of the timber and the understory vegetation and burn out pockets in the peat bed. Burns of this severity were usually small and spotty. Over most of the swamp, the burns were surface fires which generally killed most of the underbrush but rarely burned deep enough into the peat bed to kill the larger trees. In many places the swamp fires swept over lightly, burning surface duff and killing only the smaller underbrush. Some areas were missed entirely. On the upland adjacent to the swamp, the fires were very de structive, killing most of the pine timber on the 140,000 acres burned over. The destruction of pine forests on the upland and the severe 199 EUGENE CYPERT burns in the swamp caused considerable concern among conservation ists and neighboring land owners. It was believed desirable to learn something of the succession of vegetation on some of the more severely burned areas. Such knowl edge would add to an understanding of the ecology and history of the swamp and to an understanding of the relation that fires may have to swamp wildlife. -
Development of 16 Microsatellite Markers for Prince's Pine, Chimaphila Japonica (Pyroleae, Monotropoideae, Ericaceae)
Int. J. Mol. Sci. 2012, 13, 4003-4008; doi:10.3390/ijms13044003 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Short Note Development of 16 Microsatellite Markers for Prince’s Pine, Chimaphila japonica (Pyroleae, Monotropoideae, Ericaceae) Zhenwen Liu 1,†, Qianru Zhao 1,2,†, Jing Zhou 3, Hua Peng 1 and Junbo Yang 4,* 1 Key Laboratory of Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; E-Mails: [email protected] (Z.L.); [email protected] (Q.Z.); [email protected] (H.P.) 2 Graduate School of Chinese Academy of Sciences, Beijing 100049, China 3 School of Pharmaceutical Science & Yunnan Key Laboratory of Pharmacology for Natural Products, Kunming Medical University, 1168 Western Chunrong Road,Yuhua Street, Chenggong New City, Kunming 650500, Yunnan, China; E-Mail: [email protected] 4 Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China † These authors contributed equally to this work. * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +86-871-5223139; Fax: +86-871-5217791. Received: 6 February 2012; in revised form: 15 March 2012 / Accepted: 19 March 2012 / Published: 23 March 2012 Abstract: The perennial evergreen herb, Chimaphila japonica is found exclusively in East Asian temperate coniferous or sometimes in deciduous forests. By using the Fast Isolation by Amplified Fragment Length Polymorphism (AFLP) of Sequences Containing repeats (FIASCO) protocol, 20 microsatellite primer sets were identified in two wild populations. Of these primers, 16 displayed polymorphisms and 4 were monomorphic. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
(Balsaminaceae) Using Chloroplast Atpb-Rbcl Spacer Sequences
Systematic Botany (2006), 31(1): pp. 171–180 ᭧ Copyright 2006 by the American Society of Plant Taxonomists Phylogenetics of Impatiens and Hydrocera (Balsaminaceae) Using Chloroplast atpB-rbcL Spacer Sequences STEVEN JANSSENS,1,4 KOEN GEUTEN,1 YONG-MING YUAN,2 YI SONG,2 PHILIPPE KU¨ PFER,2 and ERIK SMETS1,3 1Laboratory of Plant Systematics, Institute of Botany and Microbiology, Kasteelpark Arenberg 31, B-3001 Leuven, Belgium; 2Institut de Botanique, Universite´ de Neuchaˆtel, Neuchaˆtel, Switzerland; 3Nationaal Herbarium Nederland, Universiteit Leiden Branch, PO Box 9514, 2300 RA Leiden, The Netherlands 4Author for correspondence ([email protected]) ABSTRACT. Balsaminaceae are a morphologically diverse family with ca. 1,000 representatives that are mainly distributed in the Old World tropics and subtropics. To understand the relationships of its members, we obtained chloroplast atpB-rbcL sequences from 86 species of Balsaminaceae and five outgroups. Phylogenetic reconstructions using parsimony and Bayesian approaches provide a well-resolved phylogeny in which the sister group relationship between Impatiens and Hydrocera is confirmed. The overall topology of Impatiens is strongly supported and is geographically structured. Impatiens likely origi- nated in South China from which it colonized the adjacent regions and afterwards dispersed into North America, Africa, India, the Southeast Asian peninsula, and the Himalayan region. Balsaminaceae are annual or perennial herbs with in the intrageneric relationships of Impatiens. The most flowers that exhibit a remarkable diversity. The family recent molecular intrageneric study on Balsaminaceae consists of more than 1,000 species (Grey-Wilson utilized Internal Transcribed Spacer (ITS) sequences 1980a; Clifton 2000), but only two genera are recog- and provided new phylogenetic insights in Impatiens nized. -
A Brief Nomenclatural Review of Genera and Tribes in Theaceae Linda M
Aliso: A Journal of Systematic and Evolutionary Botany Volume 24 | Issue 1 Article 8 2007 A Brief Nomenclatural Review of Genera and Tribes in Theaceae Linda M. Prince Rancho Santa Ana Botanic Garden, Claremont, California Follow this and additional works at: http://scholarship.claremont.edu/aliso Part of the Botany Commons, and the Ecology and Evolutionary Biology Commons Recommended Citation Prince, Linda M. (2007) "A Brief Nomenclatural Review of Genera and Tribes in Theaceae," Aliso: A Journal of Systematic and Evolutionary Botany: Vol. 24: Iss. 1, Article 8. Available at: http://scholarship.claremont.edu/aliso/vol24/iss1/8 Aliso 24, pp. 105–121 ᭧ 2007, Rancho Santa Ana Botanic Garden A BRIEF NOMENCLATURAL REVIEW OF GENERA AND TRIBES IN THEACEAE LINDA M. PRINCE Rancho Santa Ana Botanic Garden, 1500 North College Ave., Claremont, California 91711-3157, USA ([email protected]) ABSTRACT The angiosperm family Theaceae has been investigated extensively with a rich publication record of anatomical, cytological, paleontological, and palynological data analyses and interpretation. Recent developmental and molecular data sets and the application of cladistic analytical methods support dramatic changes in circumscription at the familial, tribal, and generic levels. Growing interest in the family outside the taxonomic and systematic fields warrants a brief review of the recent nomenclatural history (mainly 20th century), some of the classification systems currently in use, and an explanation of which data support various classification schemes. An abridged bibliography with critical nomen- clatural references is provided. Key words: anatomy, classification, morphology, nomenclature, systematics, Theaceae. INTRODUCTION acters that were restricted to the family and could be used to circumscribe it.