Correlation Between DNA Ploidy, Metaphase High-Resolution Comparative Genomic Hybridization Results and Clinical Outcome of Syno
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Expression of ALK1 and P80 in Inflammatory Myofibroblastic Tumor and Its Mesenchymal Mimics: a Study of 135 Cases Melissa H
Expression of ALK1 and p80 in Inflammatory Myofibroblastic Tumor and Its Mesenchymal Mimics: A Study of 135 Cases Melissa H. Cessna, M.D., Holly Zhou, M.D., Warren G. Sanger, Ph.D., Sherrie L. Perkins, M.D., Ph.D., Sheryl Tripp, M.T., Diane Pickering, M.S., Clark Daines, M.D., Cheryl M. Coffin, M.D. Department of Pathology, Primary Children’s Medical Center and University of Utah School of Medicine, Salt Lake City, Utah (MHC, HZ, SLP, ST, CD, CMC); and Department of Pediatrics, University of Nebraska Medical Center, Omaha, Nebraska (WGS, DP) between structural abnormalities involving 2p23 or Abnormalities of chromosome 2p23 with expres- additional copies of 2p23, it supports the concept of sion of ALK1 and p80 occur in both inflammatory ALK involvement in a larger group of neoplasms, myofibroblastic tumor (IMT) and anaplastic large some of which have other documented clonal ab- cell lymphoma. This immunohistochemical study normalities. In IMT, immunohistochemistry for investigates whether the ALK family of neoplasms ALK1 and p80 is useful as an indicator of a 2p23 includes fibroblastic–myofibroblastic, myogenic, abnormality, but it must be interpreted in the con- and spindle cell tumors. Formalin-fixed paraffin- text of histologic and other clinicopathologic data if embedded archival tissues from 10 IMTs and 125 used as an adjunct to differential diagnosis. other soft tissue tumors were stained for ALK1 and p80 with standard immunohistochemistry. ALK1 KEY WORDS: ALK gene rearrangements, ALK im- and/or p80 reactivity was observed in a cytoplasmic munohistochemistry, Anaplastic large cell lym- pattern in IMT (4/10; 40%), malignant peripheral phoma, Inflammatory myofibroblastic tumor. -
The Health-Related Quality of Life of Sarcoma Patients and Survivors In
Cancers 2020, 12 S1 of S7 Supplementary Materials The Health-Related Quality of Life of Sarcoma Patients and Survivors in Germany—Cross-Sectional Results of A Nationwide Observational Study (PROSa) Martin Eichler, Leopold Hentschel, Stephan Richter, Peter Hohenberger, Bernd Kasper, Dimosthenis Andreou, Daniel Pink, Jens Jakob, Susanne Singer, Robert Grützmann, Stephen Fung, Eva Wardelmann, Karin Arndt, Vitali Heidt, Christine Hofbauer, Marius Fried, Verena I. Gaidzik, Karl Verpoort, Marit Ahrens, Jürgen Weitz, Klaus-Dieter Schaser, Martin Bornhäuser, Jochen Schmitt, Markus K. Schuler and the PROSa study group Includes Entities We included sarcomas according to the following WHO classification. - Fletcher CDM, World Health Organization, International Agency for Research on Cancer, editors. WHO classification of tumours of soft tissue and bone. 4th ed. Lyon: IARC Press; 2013. 468 p. (World Health Organization classification of tumours). - Kurman RJ, International Agency for Research on Cancer, World Health Organization, editors. WHO classification of tumours of female reproductive organs. 4th ed. Lyon: International Agency for Research on Cancer; 2014. 307 p. (World Health Organization classification of tumours). - Humphrey PA, Moch H, Cubilla AL, Ulbright TM, Reuter VE. The 2016 WHO Classification of Tumours of the Urinary System and Male Genital Organs—Part B: Prostate and Bladder Tumours. Eur Urol. 2016 Jul;70(1):106–19. - World Health Organization, Swerdlow SH, International Agency for Research on Cancer, editors. WHO classification of tumours of haematopoietic and lymphoid tissues: [... reflects the views of a working group that convened for an Editorial and Consensus Conference at the International Agency for Research on Cancer (IARC), Lyon, October 25 - 27, 2007]. 4. ed. -
Radiation-Associated Synovial Sarcoma
Radiation-Associated Synovial Sarcoma: Clinicopathologic and Molecular Analysis of Two Cases Jean-François Egger, M.D., Jean-Michel Coindre, M.D., Jean Benhattar, Ph.D., Philippe Coucke, M.D., Louis Guillou, M.D. University Institute of Pathology (J-FE, JB, LG) and Department of Radiooncology, University Hospital (PC), Lausanne, Switzerland; Bergonié Institute and University of Bordeaux II (J-MC), Bordeaux, France region, or viscera (1, 2). SS bears the t(X;18) (SYT- Development of a soft-tissue sarcoma is an infre- SSX) reciprocal translocation that seems to be spe- quent but well-known long-term complication of cific for this tumor type and can be routinely de- radiotherapy. Malignant fibrous histiocytomas, ex- tected in paraffin-embedded tissue using the traskeletal osteosarcomas, fibrosarcomas, malig- reverse transcriptase–polymerase chain reaction nant peripheral nerve sheath tumors, and angiosar- (RT-PCR; 3–6). Radiation-associated sarcomas are comas are most frequently encountered. Radiation- an infrequent but well-known long-term complica- associated synovial sarcomas are exceptional. We tion of radiotherapy (7–16). They occur in about report the clinicopathologic, immunohistochemi- 1/1000 patients who have undergone radiation cal, and molecular features of two radiation- therapy (7–11). Radiation-associated sarcomas are associated synovial sarcomas. One tumor developed defined as sarcomas arising in a previously irradi- in a 42-year-old female 17 years after external irra- ated field after a latency period of Ն2 years (12). diation was given for breast carcinoma; the other They usually show a more aggressive clinical course occurred in a 34-year-old female who was irradiated associated with shortened patient survival as com- at the age of 7 years for a nonneoplastic condition of pared with sporadic sarcomas (9–12, 14). -
Synovial Sarcoma: Recent Discoveries As a Roadmap to New Avenues for Therapy
Published OnlineFirst January 22, 2015; DOI: 10.1158/2159-8290.CD-14-1246 REVIEW Synovial Sarcoma: Recent Discoveries as a Roadmap to New Avenues for Therapy Torsten O. Nielsen 1 , Neal M. Poulin 1 , and Marc Ladanyi 2 ABSTRACT Oncogenesis in synovial sarcoma is driven by the chromosomal translocation t(X,18; p11,q11), which generates an in-frame fusion of the SWI/SNF subunit SS18 to the C-terminal repression domains of SSX1 or SSX2. Proteomic studies have identifi ed an integral role of SS18–SSX in the SWI/SNF complex, and provide new evidence for mistargeting of polycomb repression in synovial sarcoma. Two recent in vivo studies are highlighted, providing additional support for the importance of WNT signaling in synovial sarcoma: One used a conditional mouse model in which knock- out of β-catenin prevents tumor formation, and the other used a small-molecule inhibitor of β-catenin in xenograft models. Signifi cance: Synovial sarcoma appears to arise from still poorly characterized immature mesenchymal progenitor cells through the action of its primary oncogenic driver, the SS18–SSX fusion gene, which encodes a multifaceted disruptor of epigenetic control. The effects of SS18–SSX on polycomb-mediated gene repression and SWI/SNF chromatin remodeling have recently come into focus and may offer new insights into the basic function of these processes. A central role for deregulation of WNT–β-catenin sig- naling in synovial sarcoma has also been strengthened by recent in vivo studies. These new insights into the the biology of synovial sarcoma are guiding novel preclinical and clinical studies in this aggressive cancer. -
The Role of Cytogenetics and Molecular Diagnostics in the Diagnosis of Soft-Tissue Tumors Julia a Bridge
Modern Pathology (2014) 27, S80–S97 S80 & 2014 USCAP, Inc All rights reserved 0893-3952/14 $32.00 The role of cytogenetics and molecular diagnostics in the diagnosis of soft-tissue tumors Julia A Bridge Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA Soft-tissue sarcomas are rare, comprising o1% of all cancer diagnoses. Yet the diversity of histological subtypes is impressive with 4100 benign and malignant soft-tissue tumor entities defined. Not infrequently, these neoplasms exhibit overlapping clinicopathologic features posing significant challenges in rendering a definitive diagnosis and optimal therapy. Advances in cytogenetic and molecular science have led to the discovery of genetic events in soft- tissue tumors that have not only enriched our understanding of the underlying biology of these neoplasms but have also proven to be powerful diagnostic adjuncts and/or indicators of molecular targeted therapy. In particular, many soft-tissue tumors are characterized by recurrent chromosomal rearrangements that produce specific gene fusions. For pathologists, identification of these fusions as well as other characteristic mutational alterations aids in precise subclassification. This review will address known recurrent or tumor-specific genetic events in soft-tissue tumors and discuss the molecular approaches commonly used in clinical practice to identify them. Emphasis is placed on the role of molecular pathology in the management of soft-tissue tumors. Familiarity with these genetic events -
Fertility Following Treatment of High‑Grade Malignant Bone and Soft Tissue Tumors in Young Adults
MOLECULAR AND CLINICAL ONCOLOGY 3: 367-374, 2015 Fertility following treatment of high‑grade malignant bone and soft tissue tumors in young adults MANABU HOSHI, MASATSUGU TAKAMI, MAKOTO IEGUCHI, MASANARI AONO, JUN TAKADA, NAOTO OEBISU, TADASHI IWAI and HIROAKI NAKAMURA Department of Orthopedic Surgery, Osaka City University Graduate School of Medicine, Osaka 545-8585, Japan Received July 28, 2014; Accepted November 18, 2014 DOI: 10.3892/mco.2014.474 Abstract. This study was conducted to investigate marriage Introduction and fertility in long-term survivors with high-grade bone and soft tissue tumors following chemotherapy. We Over the last few years, with the advances in multidisciplinary reviewed issues related to fertility in 47 patients (24 men therapy, including neoadjuvant chemotherapy (1,2), radiation and 23 women) who had survived for >5 years. The median therapy (3) and limb-preserving surgery (4,5), the prognosis of age at diagnosis was 18.0±8.9 years and the mean duration high-grade bone and soft tissue tumors has markedly improved, of follow-up 11.0 years. We investigated the proportions of with a corresponding increase in the number of long-term married subjects (number of married/total number of subjects) survivors. This increase has generated new problems in the and fertile subjects (number who had fathered or conceived form of latent treatment-related adverse effects (6). Although offspring/total number of subjects), the interval between first several types of cancer occur predominantly in the elderly, a delivery and last chemotherapy, type of delivery, congenital number of cancers arise prior to or during the reproductive deformities in the offspring and the association between age. -
Immunoreactivity of CD99 in Non-Hodgkin's Lymphoma
CORE Metadata, citation and similar papers at core.ac.uk Provided by PubMed Central J Korean Med Sci 2005; 20: 952-6 Copyright � The Korean Academy ISSN 1011-8934 of Medical Sciences Immunoreactivity of CD99 in Non-Hodgkin’s Lymphoma : Unexpected Frequent Expression in ALK-positive Anaplastic Large Cell Lymphoma To verify the spectrum of CD99-expressing lymphoid malignancy, an immunohisto- Chang Ohk Sung, Young H. Ko, chemical study for CD99 was carried out in 182 cases of non-Hodgkin's lymphoma, Sanghui Park, Kihyun Kim*, including 21 lymphoblastic lymphomas, 11 small lymphocytic lymphomas, 9 mantle Wonseog Kim* cell lymphomas, 12 follicular lymphomas, 37 diffuse large B cell lymphomas, 18 Departments of Pathology and Hematooncology*, Burkitt's lymphomas, 28 NK/T-cell lymphomas, 8 angioimmunoblastic T-cell lym- Samsung Medical Center, Sungkyunkwan University phomas, 23 peripheral T-cell lymphomas, unspecified, and 15 systemic anaplastic School of Medicine, Seoul, Korea large cell lymphomas. CD99 was positive in all T-lymphoblastic lymphomas and in 60% of B-lymphoblastic lymphomas. Majority of T and NK cell lymphomas were negative for CD99, except anaplastic large cell lymphomas (ALCLs). Eight of 15 Received : 28 February 2005 cases (54%) of ALCLs reacted with anti CD99 antibody. Seven of 10 (70%) ALK Accepted : 24 June 2005 positive ALCLs expressed CD99, whereas only 1 of 5 (20%) ALK negative ALCLs were positive. Of the mature B-cell lymphomas, 5.4% (2/37) of diffuse large B cell lymphomas and 11.1% (2/18) of Burkitt's lymphomas expressed CD99. In conclu- Address for correspondence sion, CD99 is infrequently expressed in mature B and T cell lymphomas, except Young-Hyeh Ko, M.D. -
New Strategies in Sarcoma Therapy: Linking Biology and Novel Agents
Published OnlineFirst August 28, 2012; DOI: 10.1158/1078-0432.CCR-12-0875 Clinical Cancer CCR New Strategies Research New Strategies in Sarcoma Therapy: Linking Biology and Novel Agents Katherine A. Janeway1 and Robert G. Maki2 Abstract The ability to better interrogate the genetic state of a given cancer is giving rise to a new paradigm in cancer therapeutics in which the specific genetic alterations that give rise to the cancer inform the therapeutic decision-making for that specific patient. Sarcomas of soft tissue and bone represent model diseases that underscore this paradigm. However, many barriers prevent linkage of one of the 75 or more different types of sarcoma to novel therapeutic agents. In the present perspective, the authors outline key therapeutic opportunities and hurdles in clinical sarcoma research, focusing on specific examples of sarcomas that are on the verge of new breakthroughs, as well as those in which promise has not lived up to expectations. Focused clinical trial design, ideally with several biomarker or histology-specific arms, is one means to be simultaneously parsimonious and inclusive. Clin Cancer Res; 18(21); 5837–44. Ó2012 AACR. Background cancers (Fig. 1). The most common sarcomas that arise in Sarcomas represent a family of rare cancers of bone and children are aneuploid sarcomas, such as osteogenic sarco- soft tissue accounting for less than 1% of cancer in adults ma as well as those with specific translocations, such as and approximately 15% of pediatric cancer (1). They are Ewing sarcoma and alveolar rhabdomyosarcoma (ARMS). biologically heterogeneous, with more than 50 histologic In adults, the most common sarcomas are usually aneu- subtypes identified in soft tissue and more than 20 in bone, ploid, including leiomyosarcoma, and undifferentiated in keeping with the multiple types of connective tissue that pleomorphic sarcoma (UPS, formerly termed MFH, malig- comprise the scaffolding of the human body (2). -
Differentiating Ewing's Sarcoma from Other Round Blue Cell Tumors Using A
Modern Pathology (2007) 20, 397–404 & 2007 USCAP, Inc All rights reserved 0893-3952/07 $30.00 www.modernpathology.org Differentiating Ewing’s sarcoma from other round blue cell tumors using a RT-PCR translocation panel on formalin-fixed paraffin-embedded tissues Tracey B Lewis1, Cheryl M Coffin1,2 and Philip S Bernard1,2,3 1The ARUP Institute for Clinical and Experimental Pathology, Salt Lake City, UT, USA; 2Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT, USA and 3Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA Ewing’s sarcoma is a common malignancy of bone and soft tissue that occurs most often in children and young adults. Differentiating Ewing’s sarcoma from other round blue cell tumors can be a diagnostic challenge because of their similarity in histology and clinical presentation. Thus, ancillary molecular tests for detecting disease-defining translocations are important for confirming the diagnosis. We analyzed 65 round blue cell tumors, including 53 Ewing’s sarcoma samples from 50 unique cases. Samples were processed for RNA from archived formalin-fixed paraffin-embedded tissue blocks. Real-time RT-PCR assays specific for Ewing’s sarcoma (EWS-FLI1, EWS-ERG, EWS-ETV1, EWS-ETV4, and EWS-FEV), synovial sarcoma (SYT-SSX1 and SYT-SSX2), and rhabdomyosarcoma (PAX3-FKHR and PAX7-FKHR) were tested across the samples. The translocation panel had a sensitivity of 81% (43 out of 53 samples) for diagnosing Ewing’s sarcoma when using the histological criteria as the ‘gold’ standard. None of the Ewing’s specific translocations were found in the non-Ewing’s samples (100% specificity). -
Molecular Diagnosis of Soft Tissue Tumors: Avoid Pitfalls
Molecular Diagnosis of Soft Tissue Tumors: Avoid Pitfalls Cristina Antonescu, MD Department of Pathology Memorial Sloan-Kettering Cancer Center, New York Overview I. When should we rely on the help of molecular testing? II. Specificity, Prevalence, and Prognostic Implications of Molecular Abnormalities. III. ‘Gold Standard’ in surgical pathology of soft tissue tumors I. When should we rely on the help of molecular testing? – difficult distinctions between a benign and malignant diagnosis – unusual morphologic features – unusual clinical presentations or unexpected immunohistochemical results – refined classification may directly impact on clinical management of the patient – confirm diagnosis in conflicting second opinions Benign vs Malignant STT – Perineurioma versus Low Grade Fibromyxoid Sarcoma – SFT/HPC versus Synovial Sarcoma (SS) – Angiomatoid Fibrous Histiocytoma vs sarcoma – Lipoblastoma vs myxoid liposarcoma in children Sarcomas with unusual morphologic appearance – Desmoplastic Round Cell Tumor (DRCT) with predominantly rosettes or tubular structure formation – Small cell GIST in children STT with typical morphology but unusual clinical presentation – Ewing Sarcoma in superficial location – Ewing Sarcoma in older individuals (>40 years) – Ewing Sarcoma in visceral location STT associated with an unusual immunoprofile – Ewing Sarcoma (ES) with strong Keratin expression – Synovial sarcoma with S100 protein positivity Refined classification may directly impact on clinical management – GIST versus sarcoma, NOS – Ewing Sarcoma vs -
Soft Tissue Sarcoma: an Insight on Biomarkers at Molecular, Metabolic and Cellular Level
cancers Review Soft Tissue Sarcoma: An Insight on Biomarkers at Molecular, Metabolic and Cellular Level Serena Pillozzi 1,* , Andrea Bernini 2, Ilaria Palchetti 3 , Olivia Crociani 4, Lorenzo Antonuzzo 1,4, Domenico Campanacci 5 and Guido Scoccianti 6 1 Medical Oncology Unit, Careggi University Hospital, Largo Brambilla 3, 50134 Florence, Italy; lorenzo.antonuzzo@unifi.it 2 Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Via Aldo Moro 2, 53100 Siena, Italy; [email protected] 3 Department of Chemistry Ugo Schiff, University of Florence, Via della Lastruccia 3, 50019 Sesto Fiorentino, Italy; ilaria.palchetti@unifi.it 4 Department of Experimental and Clinical Medicine, University of Florence, Largo Brambilla 3, 50134 Florence, Italy; olivia.crociani@unifi.it 5 Department of Health Science, University of Florence, Largo Brambilla 3, 50134 Florence, Italy; domenicoandrea.campanacci@unifi.it 6 Department of Orthopaedic Oncology and Reconstructive Surgery, University of Florence, Careggi University Hospital, Largo Brambilla 3, 50134 Florence, Italy; [email protected] * Correspondence: serena.pillozzi@unifi.it Simple Summary: Soft tissue sarcoma is a rare mesenchymal malignancy. Despite the advancements in the fields of radiology, pathology and surgery, these tumors often recur locally and/or with metastatic disease. STS is considered to be a diagnostic challenge due to the large variety of histologi- Citation: Pillozzi, S.; Bernini, A.; cal subtypes with clinical and histopathological characteristics which are not always distinct. One of Palchetti, I.; Crociani, O.; Antonuzzo, the important clinical problems is a lack of useful biomarkers. Therefore, the discovery of biomarkers L.; Campanacci, D.; Scoccianti, G. Soft that can be used to detect tumors or predict tumor response to chemotherapy or radiotherapy could Tissue Sarcoma: An Insight on help clinicians provide more effective clinical management. -
Targetable Alterations in Adult Patients with Soft-Tissue Sarcomas
Supplementary Online Content Lucchesi C, Khalifa E, Laizet Y, et al. Genomic landscape of adult soft-tissue sarcomas: moving toward personalized medicine [published online May 3, 2018] . JAMA Oncol. doi:10.1001/jamaoncol.2018.0723 eMethods. eTable 1. Actionable alterations in a series of 584 STS eTable 2. Clinical outcome of STS patients treated with targeted therapies eFigure 1. Proportion of genetic alterations according to genetic class of STS eFigure 2. Distribution of the number of alterations eFigure 3. Lollipop-style mutation diagrams for frequently altered genes eFigure 4. Distribution of actionable alterations in the 10 most frequent histological subtypes of STS eFigure 5. Co-occurrence and mutual exclusivity of genetic alterations in STS eFigure 6. Objective responses to targeted therapies in STS eFigure 7. Design of the MULTISARC study This supplementary material has been provided by the authors to give readers additional information about their work. © 2018 American Medical Association. All rights reserved. Downloaded From: https://jamanetwork.com/ on 09/29/2021 SUPPLEMENTARY METHODS Bioinformatics Analysis Percentage of Sarcoma samples covered by the different NGS assays of AACR Genie The GENIE data guide (referenced in the Material and Methods: http://www.aacr.org/Documents/GENIEDataGuide.pdf) describes the characteristics of NGS assays used in the study. 584 adults Soft tissue Sarcoma have been sequenced with differently-sized NGS assays whose cumulative sample distribution is reported below. It shows that 493 samples (84%, n=584) are covered by the 4 large-panel NGS assays of the MSK and DFCI Institutes, which include from 300 to 451 genes. © 2018 American Medical Association.