Community Structure of Harpacticoid Copepods from the Southeast Continental Shelf of India
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Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
A New Minute Ectosymbiotic Harpacticoid Copepod Living on the Sea Cucumber Eupentacta Fraudatrix in the East/Japan Sea
A new minute ectosymbiotic harpacticoid copepod living on the sea cucumber Eupentacta fraudatrix in the East/Japan Sea Jisu Yeom1, Mikhail A. Nikitin2, Viatcheslav N. Ivanenko3 and Wonchoel Lee1 1 Department of Life Science, Hanyang University, Seoul, South Korea 2 A.N. Belozersky Institute of Physico-chemical Biology, Lomonosov Moscow State University, Moscow, Russia 3 Department of Invertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, Moscow, Russia ABSTRACT The ectosymbiotic copepods, Vostoklaophonte eupenta gen. & sp. nov. associated with the sea cucumber Eupentacta fraudatrix, was found in the subtidal zone of Peter the Great Bay, East/Japan Sea. The new genus, Vostoklaophonte, is similar to Microchelonia in the flattened body form, reduced mandible, maxillule and maxilla, but with well-developed prehensile maxilliped, and in the reduced segmentation and setation of legs 1–5. Most appendages of the new genus are more primitive than those of Microchelonia. The inclusion of the symbiotic genera Microchelonia and Vostoklaophonte gen. nov. in Laophontidae, as well as their close phylogenetic relationships, are supported by morphological observations and molecular data. This is the third record of laophontid harpacticoid copepods living in symbiosis with sea cucumbers recorded from the Korean and Californian coasts. Subjects Biodiversity, Marine Biology, Taxonomy Keywords Copepoda, Laophontidae, Eupentacta fraudatrix, Ectosymbiosis, New genus, 18S rDNA INTRODUCTION 21 December 2017 Submitted Symbiotic harpacticoids that use holothurians as hosts are rarely reported compared to Accepted 16 May 2018 Published 14 June 2018 the orders Poecilostomatoida and Siphonostomatoida (Humes, 1980; Ho, 1982; Jangoux, Corresponding author 1990; Mahatma, Arbizu & Ivanenko, 2008; Avdeev, 2017). Among harpacticoids, only one Wonchoel Lee, [email protected] species of Tisbidae Stebbing, 1910—Sacodiscus humesi Stock, 1960— and two species of Academic editor Laophontidae T. -
The Shore Fauna of Brighton, East Sussex (Eastern English Channel): Records 1981-1985 (Updated Classification and Nomenclature)
The shore fauna of Brighton, East Sussex (eastern English Channel): records 1981-1985 (updated classification and nomenclature) DAVID VENTHAM FLS [email protected] January 2021 Offshore view of Roedean School and the sampling area of the shore. Photo: Dr Gerald Legg Published by Sussex Biodiversity Record Centre, 2021 © David Ventham & SxBRC 2 CONTENTS INTRODUCTION…………………………………………………………………..………………………..……7 METHODS………………………………………………………………………………………………………...7 BRIGHTON TIDAL DATA……………………………………………………………………………………….8 DESCRIPTIONS OF THE REGULAR MONITORING SITES………………………………………………….9 The Roedean site…………………………………………………………………………………………………...9 Physical description………………………………………………………………………………………….…...9 Zonation…………………………………………………………………………………………………….…...10 The Kemp Town site……………………………………………………………………………………………...11 Physical description……………………………………………………………………………………….…….11 Zonation…………………………………………………………………………………………………….…...12 SYSTEMATIC LIST……………………………………………………………………………………………..15 Phylum Porifera…………………………………………………………………………………………………..15 Class Calcarea…………………………………………………………………………………………………15 Subclass Calcaronea…………………………………………………………………………………..……...15 Class Demospongiae………………………………………………………………………………………….16 Subclass Heteroscleromorpha……………………………………………………………………………..…16 Phylum Cnidaria………………………………………………………………………………………………….18 Class Scyphozoa………………………………………………………………………………………………18 Class Hydrozoa………………………………………………………………………………………………..18 Class Anthozoa……………………………………………………………………………………………......25 Subclass Hexacorallia……………………………………………………………………………….………..25 -
Appendix A: Ecological Risk Assessment
Lower Duwamish Waterway Group Port of Seattle / City of Seattle / King County / The Boeing Company Lower Duwamish Waterway Remedial Investigation APPENDIX A. PHASE 1 ECOLOGICAL RISK ASSESSMENT FINAL For submittal to The U.S. Environmental Protection Agency Region 10 Seattle, WA The Washington State Department of Ecology Northwest Regional Office Bellevue, WA July 3, 2003 Prepared by: 200 West Mercer Street, Suite 401 Seattle, Washington 98119 Table of Contents LIST OF TABLES V LIST OF FIGURES XI ACRONYMS XIII EXECUTIVE SUMMARY ES-1 ES.1 PROBLEM FORMULATION ES-2 ES.2 EXPOSURE ASSESSMENT ES-2 ES.3 EFFECTS ASSESSMENT ES-3 ES.4 RISK CHARACTERIZATION AND UNCERTAINTY ASSESSMENT ES-3 A.1 INTRODUCTION 1 A.2 PROBLEM FORMULATION 2 A.2.1 ENVIRONMENTAL SETTING 2 A.2.1.1 Site description and history 3 A.2.1.2 Habitat features 5 A.2.1.3 Hydrologic data 5 A.2.1.4 Estuarine features 6 A.2.1.5 Sediment dynamics and load 7 A.2.2 RESOURCES POTENTIALLY AT RISK 8 A.2.2.1 State and federal threatened, endangered, and sensitive species in the LDW 8 A.2.2.2 Benthic invertebrates 9 A.2.2.3 Fish 19 A.2.2.4 Wildlife 31 A.2.2.5 Plants 39 A.2.3 RECEPTOR OF CONCERN SELECTION 40 A.2.3.1 Benthic invertebrates 41 A.2.3.2 Fish 42 A.2.3.3 Wildlife 46 A.2.3.4 Plants 48 A.2.3.5 Summary of ROC Selection 49 A.2.4 CHEMICAL OF POTENTIAL CONCERN SELECTION 52 A.2.4.1 Data used in COPC screening 52 A.2.4.2 Data availability 52 A.2.4.3 Data selection and reduction 56 A.2.4.4 Suitability of data for risk assessment 57 A.2.4.5 Benthic invertebrates 59 A.2.4.6 Fish 65 A.2.4.7 Wildlife -
Taxonomic Publications: Past and Future
Org. Divers. Evol. 5, Electr. Suppl. 13: 1 - 109 (2005) © Gesellschaft für Biologische Systematik http://senckenberg.de/odes/05-13.htm URN: urn:nbn:de:0028-odes0513-7 Abstracts of talks and posters Org. Divers. Evol. 5, Electr. Suppl. 13 (2005) Burckhardt & Mühlethaler (eds): 8th GfBS Annual Conference Abstracts 2 8th annual meeting of the GfBS 13-16 September 2005 in Basle organised by NHMB: Michel Brancucci Daniel Burckhardt Roland Mühlethaler NLU-Biogeographie: Peter Nagel Org. Divers. Evol. 5, Electr. Suppl. 13 (2005) Burckhardt & Mühlethaler (eds): 8th GfBS Annual Conference Abstracts 3 Org. Divers. Evol. 5, Electr. Suppl. 13 (2005) Burckhardt & Mühlethaler (eds): 8th GfBS Annual Conference Abstracts 4 8th annual meeting of the GfBS 13-16 September 2005 in Basle Sponsored by Freiwillige Akademische Gesellschaft Basel ___________________________________ Org. Divers. Evol. 5, Electr. Suppl. 13 (2005) Burckhardt & Mühlethaler (eds): 8th GfBS Annual Conference Abstracts 5 Org. Divers. Evol. 5, Electr. Suppl. 13 (2005) Burckhardt & Mühlethaler (eds): 8th GfBS Annual Conference Abstracts 6 CONTENTS Contents................................................................................................................6-11 Preface .....................................................................................................................12 Abstracts of lectures and oral presentations AGOSTI D., POLASZEK A., BOEHM K. & SAUTTER G.: Taxonomic publications: past and future...............................................................................................................14 -
Irish Biodiversity: a Taxonomic Inventory of Fauna
Irish Biodiversity: a taxonomic inventory of fauna Irish Wildlife Manual No. 38 Irish Biodiversity: a taxonomic inventory of fauna S. E. Ferriss, K. G. Smith, and T. P. Inskipp (editors) Citations: Ferriss, S. E., Smith K. G., & Inskipp T. P. (eds.) Irish Biodiversity: a taxonomic inventory of fauna. Irish Wildlife Manuals, No. 38. National Parks and Wildlife Service, Department of Environment, Heritage and Local Government, Dublin, Ireland. Section author (2009) Section title . In: Ferriss, S. E., Smith K. G., & Inskipp T. P. (eds.) Irish Biodiversity: a taxonomic inventory of fauna. Irish Wildlife Manuals, No. 38. National Parks and Wildlife Service, Department of Environment, Heritage and Local Government, Dublin, Ireland. Cover photos: © Kevin G. Smith and Sarah E. Ferriss Irish Wildlife Manuals Series Editors: N. Kingston and F. Marnell © National Parks and Wildlife Service 2009 ISSN 1393 - 6670 Inventory of Irish fauna ____________________ TABLE OF CONTENTS Executive Summary.............................................................................................................................................1 Acknowledgements.............................................................................................................................................2 Introduction ..........................................................................................................................................................3 Methodology........................................................................................................................................................................3 -
Biodiversita' Ed Ecologia Della Comunita
UNIVERSITA’ DEGLI STUDI DI URBINO “CARLO BO” DIPARTIMENTO DI SCIENZE DELLA TERRA, DELLA VITA E DELL’AMBIENTE (DISTEVA) CORSO DI DOTTORATO DI RICERCA IN: MECCANISMI DI REGOLAZIONE CELLULARE: ASPETTI MORFO-FUNZIONALI ED EVOLUTIVI XXVIII CICLO BIODIVERSITA’ ED ECOLOGIA DELLA COMUNITA’ MEIOBENTONICA IN RELAZIONE A DIVERSE TIPOLOGIE DI HABITAT Settore Scientifico Disciplinare: BIO/05 Tutor: Dottorando: Chiar.ma Prof.ssa MARIA BALSAMO Dott.ssa CLAUDIA SBROCCA Co-Tutor: Dott.ssa FEDERICA SEMPRUCCI ANNO ACCADEMICO 2014-2015 INDICE CAPITOLO 1 1. INTRODUZIONE GENERALE .............................................................................................................................................. 4 1.1. MEIOBENTHOS E MEIOFAUNA ............................................................................................................................... 4 1.1.1. Cenni bibliografici .......................................................................................................................................................... 4 1.1.2. Meiofauna di fondi molli ............................................................................................................................................. 6 1.1.3. Meiofauna di fondi duri ................................................................................................................................................ 9 1.2. MEIOFAUNA COME STRUMENTO NEL MONITORAGGIO AMBIENTALE ............................ 12 1.3. NEMATODI .......................................................................................................................................................................... -
Subphylum Crustacea Brünnich, 1772. In: Zhang, Z.-Q
Subphylum Crustacea Brünnich, 1772 1 Class Branchiopoda Latreille, 1817 (2 subclasses)2 Subclass Sarsostraca Tasch, 1969 (1 order) Order Anostraca Sars, 1867 (2 suborders) Suborder Artemiina Weekers, Murugan, Vanfleteren, Belk and Dumont, 2002 (2 families) Family Artemiidae Grochowski, 1896 (1 genus, 9 species) Family Parartemiidae Simon, 1886 (1 genus, 18 species) Suborder Anostracina Weekers, Murugan, Vanfleteren, Belk and Dumont, 2002 (6 families) Family Branchinectidae Daday, 1910 (2 genera, 46 species) Family Branchipodidae Simon, 1886 (6 genera, 36 species) Family Chirocephalidae Daday, 1910 (9 genera, 78 species) Family Streptocephalidae Daday, 1910 (1 genus, 56 species) Family Tanymastigitidae Weekers, Murugan, Vanfleteren, Belk and Dumont, 2002 (2 genera, 8 species) Family Thamnocephalidae Packard, 1883 (6 genera, 62 species) Subclass Phyllopoda Preuss, 1951 (3 orders) Order Notostraca Sars, 1867 (1 family) Family Triopsidae Keilhack, 1909 (2 genera, 15 species) Order Laevicaudata Linder, 1945 (1 family) Family Lynceidae Baird, 1845 (3 genera, 36 species) Order Diplostraca Gerstaecker, 1866 (3 suborders) Suborder Spinicaudata Linder, 1945 (3 families) Family Cyzicidae Stebbing, 1910 (4 genera, ~90 species) Family Leptestheriidae Daday, 1923 (3 genera, ~37 species) Family Limnadiidae Baird, 1849 (5 genera, ~61 species) Suborder Cyclestherida Sars, 1899 (1 family) Family Cyclestheriidae Sars, 1899 (1 genus, 1 species) Suborder Cladocera Latreille, 1829 (4 infraorders) Infraorder Ctenopoda Sars, 1865 (2 families) Family Holopediidae -
Copepoda, Harpacticoida) and Cletodidae T
Zoosyst. Evol. 96 (2) 2020, 455–498 | DOI 10.3897/zse.96.51349 Restructuring the Ancorabolidae Sars (Copepoda, Harpacticoida) and Cletodidae T. Scott, with a new phylogenetic hypothesis regarding the relationships of the Laophontoidea T. Scott, Ancorabolidae and Cletodidae Kai Horst George1 1 Senckenberg am Meer, Abt. Deutsches Zentrum für Marine Biodiversitätsforschung DZMB, Südstrand 44, D-26382 Wilhelmshaven, Germany http://zoobank.org/96C924CA-95E0-4DF2-80A8-2DCBE105416A Corresponding author: Kai Horst George ([email protected]) Academic editor: Kay Van Damme ♦ Received 21 February 2020 ♦ Accepted 10 June 2020 ♦ Published 10 July 2020 Abstract Uncovering the systematics of Copepoda Harpacticoida, the second-most abundant component of the meiobenthos after Nematoda, is of major importance for any further research dedicated especially to ecological and biogeographical approaches. Based on the evolution of the podogennontan first swimming leg, a new phylogenetic concept of the Ancorabolidae Sars and Cletodidae T. Scott sensu Por (Copepoda, Harpacticoida) is presented, using morphological characteristics. It confirms the polyphyletic status of the Ancorabolidae and its subfamily Ancorabolinae Sars and the paraphyletic status of the subfamily Laophontodinae Lang. Moreover, it clarifies the phylogenetic relationships of the so far assigned members of the family. An exhaustive phylogenetic analysis was undertaken using 150 morphological characters, resulting in the establishment of a now well-justified monophylum Ancorabolidae. In that context, the Ancorabolus-lineage sensu Conroy-Dalton and Huys is elevated to sub-family rank. Furthermore, the mem- bership of Ancorabolina George in a rearranged monophylum Laophontodinae is confirmed. Conversely, the Ceratonotus-group sensu Conroy-Dalton is transferred from the hitherto Ancorabolinae to the Cletodidae. -
An Updated Classification of the Recent Crustacea
An Updated Classification of the Recent Crustacea By Joel W. Martin and George E. Davis Natural History Museum of Los Angeles County Science Series 39 December 14, 2001 AN UPDATED CLASSIFICATION OF THE RECENT CRUSTACEA Cover Illustration: Lepidurus packardi, a notostracan branchiopod from an ephemeral pool in the Central Valley of California. Original illustration by Joel W. Marin. AN UPDATED CLASSIFICATION OF THE RECENT CRUSTACEA BY JOEL W. M ARTIN AND GEORGE E. DAVIS NO. 39 SCIENCE SERIES NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY SCIENTIFIC PUBLICATIONS COMMITTEE NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY John Heyning, Deputy Director for Research and Collections John M. Harris, Committee Chairman Brian V. Brown Kenneth E. Campbell Kirk Fitzhugh Karen Wise K. Victoria Brown, Managing Editor Natural History Museum of Los Angeles County Los Angeles, California 90007 ISSN 1-891276-27-1 Published on 14 December 2001 Printed in the United States of America PREFACE For anyone with interests in a group of organisms such knowledge would shed no light on the actual as large and diverse as the Crustacea, it is difficult biology of these fascinating animals: their behavior, to grasp the enormity of the entire taxon at one feeding, locomotion, reproduction; their relation- time. Those who work on crustaceans usually spe- ships to other organisms; their adaptations to the cialize in only one small corner of the field. Even environment; and other facets of their existence though I am sometimes considered a specialist on that fall under the heading of biodiversity. crabs, the truth is I can profess some special knowl- By producing this volume we are attempting to edge about only a relatively few species in one or update an existing classification, produced by Tom two families, with forays into other groups of crabs Bowman and Larry Abele (1982), in order to ar- and other crustaceans. -
Évaluation De La Vulnérabilité De Composantes Biologiques Du Saint-Laurent Aux Déversements D’Hydrocarbures Provenant De Navires
Secrétariat canadien de consultation scientifique (SCCS) Document de recherche 2018/003 Région du Québec ÉVALUATION DE LA VULNÉRABILITÉ DE COMPOSANTES BIOLOGIQUES DU SAINT-LAURENT AUX DÉVERSEMENTS D’HYDROCARBURES PROVENANT DE NAVIRES Christine Desjardins Dominique Hamel Lysandre Landry Pierre-Marc Scallon-Chouinard Katrine Chalut Institut Maurice-Lamontagne Pêches et Océans Canada 850 route de la Mer Mont-Joli, Québec G5H 3Z4 Mars 2018 Avant-propos La présente série documente les fondements scientifiques des évaluations des ressources et des écosystèmes aquatiques du Canada. Elle traite des problèmes courants selon les échéanciers dictés. Les documents qu’elle contient ne doivent pas être considérés comme des énoncés définitifs sur les sujets traités, mais plutôt comme des rapports d’étape sur les études en cours. Les documents de recherche sont publiés dans la langue officielle utilisée dans le manuscrit envoyé au Secrétariat. Publié par : Pêches et Océans Canada Secrétariat canadien de consultation scientifique 200, rue Kent Ottawa (Ontario) K1A 0E6 http://www.dfo-mpo.gc.ca/csas-sccs/ [email protected] © Sa Majesté la Reine du chef du Canada, 2018 ISSN 2292-4272 La présente publication doit être citée comme suit : Desjardins, C., Hamel, D., Landry, L., Scallon-Chouinard, P.-M. et Chalut, K. 2018. Évaluation de la vulnérabilité de composantes biologiques du Saint-Laurent aux déversements d’hydrocarbures provenant de navires. Secr. can. de consult. sci. du MPO. Doc. de rech. 2018/003. ix + 280 p. TABLE DES MATIÈRES LISTE DES TABLEAUX VI LISTE DES FIGURES VI RÉSUMÉ VIII ABSTRACT IX 1. INTRODUCTION 1 1.1. CONTEXTE ................................................................................................................. 1 1.1.1. -
Integrative Description of Diosaccus Koreanus Sp. Nov
A peer-reviewed open-access journal ZooKeys 927: 1–35 (2020) Integrative description of Diosaccus koreanus sp. nov. 1 doi: 10.3897/zookeys.927.49042 RESEarch arTicLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Integrative description of Diosaccus koreanus sp. nov. (Hexanauplia, Harpacticoida, Miraciidae) and integrative information on further Korean species Byung-Jin Lim1, Hyun Woo Bang2, Heejin Moon2, Jinwook Back1 1 Department of Taxonomy and Systematics, National Marine Biodiversity Institute of Korea, Seocheon 33662, Korea 2 Mokwon University, Daejeon, 35349, Korea Corresponding author: Jinwook Back ([email protected]) Academic editor: K.H. George | Received 3 December 2019 | Accepted 2 March 2020 | Published 16 April 2020 http://zoobank.org/24272A94-472E-4F9C-836F-41D11E62C353 Citation: Lim B-J, Bang HY, Moon H, Back J (2020) Integrative description of Diosaccus koreanus sp. nov. (Hexanauplia, Harpacticoida, Miraciidae) and integrative information on further Korean species. ZooKeys 927: 1–35. https://doi.org/10.3897/zookeys.927.49042 Abstract A new species of Diosaccus Boeck, 1873 (Arthropoda, Hexanauplia, Harpacticoida) was recently discov- ered in Korean waters. The species was previously recognized as D. ezoensis Itô, 1974 in Korea but, here, is described as a new species, D. koreanus sp. nov., based on the following features: 1) second inner seta on exopod of fifth thoracopod apparently longest in female, 2) outer margin of distal endopodal seg- ment of second thoracopod ornamented with long setules in male, 3) caudal seta VII located halfway from base of rami (vs. on anterior extremity in D. ezoensis), and 4) sixth thoracopod with three setae in female (vs.