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Zootaxa 1285: 1–19 (2006) ISSN 1175-5326 (Print Edition) ZOOTAXA 1285 Copyright © 2006 Magnolia Press ISSN 1175-5334 (Online Edition)
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Ghent University Academic Bibliography Zootaxa 1285: 1–19 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1285 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) A checklist of the marine Harpacticoida (Copepoda) of the Caribbean Sea EDUARDO SUÁREZ-MORALES1, MARLEEN DE TROCH 2 & FRANK FIERS 3 1El Colegio de la Frontera Sur (ECOSUR), A.P. 424, 77000 Chetumal, Quintana Roo, Mexico; Research Asso- ciate, National Museum of Natural History, Smithsonian Institution, Wahington, D.C. E-mail: [email protected] 2Ghent University, Biology Department, Marine Biology Section, Campus Sterre, Krijgslaan 281–S8, B-9000 Gent, Belgium. E-mail: [email protected] 3Royal Belgian Institute of Natural Sciences, Invertebrate Section, Vautierstraat 29, B-1000, Brussels, Bel- gium. E-mail: [email protected] Abstract Recent surveys on the benthic harpacticoids in the northwestern sector of the Caribbean have called attention to the lack of a list of species of this diverse group in this large tropical basin. A first checklist of the Caribbean harpacticoid copepods is provided herein; it is based on records in the literature and on our own data. Records from the adjacent Bahamas zone were also included. This complete list includes 178 species; the species recorded in the Caribbean and the Bahamas belong to 33 families and 94 genera. Overall, the most speciose family was the Miraciidae (27 species), followed by the Laophontidae (21), Tisbidae (17), and Ameiridae (13). Up to 15 harpacticoid families were represented by one or two species only. -
Copepoda, Harpacticoida) Within the Thalestridimorpha and Description of Two New Species from Motupore Island, Papua New Guinea
Cah. Biol. Mar. (2002) 43 : 27-42 Notes on the systematic position of the Stenheliinae (Copepoda, Harpacticoida) within the Thalestridimorpha and description of two new species from Motupore Island, Papua New Guinea Elke WILLEN Deutsches Zentrum für Marine Biodiversitätsforschung, c/o Carl v. Ossietzky Universität Oldenburg, AG Zoosystematik und Morphologie, 26111 Oldenburg, Germany Fax: (49)-0441-798-3162 - E-mail: [email protected] Abstract: Two new species of Stenheliinae, Stenhelia (D.) schminkei sp. nov. and Melima papuaensis sp. nov. are described from intertidal mud and algal washings from Motupore Island, Papua New Guinea. S. schminkei can be assigned to a species group also containing S. clavus, S. paraclavus and S. valens all described from the Andaman Islands. They share an apomorphic setation pattern of the swimming legs, a confluent female P5 and the special shape of the male P5. The group seems to have only a restricted distribution within the Indo-Pacific region. In describing Melima papuaensis sp. nov. the genus Melima is reinstated as a first step towards a revision of the paraphyletic genus Stenhelia. Autapomorphies for this taxon are defined. A key to the females of Melima is provided. In the course of a phylogenetic analysis of the Thalestridimorpha it turned out, that the “Stenhelia-group” within the traditional Diosaccidae forms a monophylum which can be assigned together with the remaining species of the Diosaccidae and the species of the former family Miraciidae to a common taxon Miraciidae within the Thalestridimorpha. A historical overview and a summary of the discussion is given and an attempt is made to identify some monophyletic subtaxa within the Stenheliinae. -
Food Webs of Mediterranean Coastal Wetlands
FOOD WEBS OF MEDITERRANEAN COASTAL WETLANDS Jordi COMPTE CIURANA ISBN: 978-84-693-8422-0 Dipòsit legal: GI-1204-2010 http://www.tdx.cat/TDX-1004110-123344 ADVERTIMENT. La consulta d’aquesta tesi queda condicionada a l’acceptació de les següents condicions d'ús: La difusió d’aquesta tesi per mitjà del servei TDX (www.tesisenxarxa.net) ha estat autoritzada pels titulars dels drets de propietat intel·lectual únicament per a usos privats emmarcats en activitats d’investigació i docència. No s’autoritza la seva reproducció amb finalitats de lucre ni la seva difusió i posada a disposició des d’un lloc aliè al servei TDX. No s’autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant al resum de presentació de la tesi com als seus continguts. En la utilització o cita de parts de la tesi és obligat indicar el nom de la persona autora. ADVERTENCIA. La consulta de esta tesis queda condicionada a la aceptación de las siguientes condiciones de uso: La difusión de esta tesis por medio del servicio TDR (www.tesisenred.net) ha sido autorizada por los titulares de los derechos de propiedad intelectual únicamente para usos privados enmarcados en actividades de investigación y docencia. No se autoriza su reproducción con finalidades de lucro ni su difusión y puesta a disposición desde un sitio ajeno al servicio TDR. No se autoriza la presentación de su contenido en una ventana o marco ajeno a TDR (framing). Esta reserva de derechos afecta tanto al resumen de presentación de la tesis como a sus contenidos. -
Order HARPACTICOIDA Manual Versión Española
Revista IDE@ - SEA, nº 91B (30-06-2015): 1–12. ISSN 2386-7183 1 Ibero Diversidad Entomológica @ccesible www.sea-entomologia.org/IDE@ Class: Maxillopoda: Copepoda Order HARPACTICOIDA Manual Versión española CLASS MAXILLOPODA: SUBCLASS COPEPODA: Order Harpacticoida Maria José Caramujo CE3C – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal. [email protected] 1. Brief definition of the group and main diagnosing characters The Harpacticoida is one of the orders of the subclass Copepoda, and includes mainly free-living epibenthic aquatic organisms, although many species have successfully exploited other habitats, including semi-terrestial habitats and have established symbiotic relationships with other metazoans. Harpacticoids have a size range between 0.2 and 2.5 mm and have a podoplean morphology. This morphology is char- acterized by a body formed by several articulated segments, metameres or somites that form two separate regions; the anterior prosome and the posterior urosome. The division between the urosome and prosome may be present as a constriction in the more cylindric shaped harpacticoid families (e.g. Ectinosomatidae) or may be very pronounced in other familes (e.g. Tisbidae). The adults retain the central eye of the larval stages, with the exception of some underground species that lack visual organs. The harpacticoids have shorter first antennae, and relatively wider urosome than the copepods from other orders. The basic body plan of harpacticoids is more adapted to life in the benthic environment than in the pelagic environment i.e. they are more vermiform in shape than other copepods. Harpacticoida is a very diverse group of copepods both in terms of morphological diversity and in the species-richness of some of the families. -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology .......... -
Delavalia Longifurca (Sewell, 1934) (Copepoda: Harpacticoida) from the Southern Iraqi Marshes and Shatt Al-Arab River, Basrah, Iraq
33 Al-Mayah & Al-Asadi Vol. 2 (1): 34-43, 2018 Delavalia longifurca (Sewell, 1934) (Copepoda: Harpacticoida) from the Southern Iraqi Marshes and Shatt Al-Arab River, Basrah, Iraq Hanaa H. Mohammed Marine Science Center, University of Basrah, Basrah, Iraq *Corresponding author: [email protected] Abstract: A marine harpacticoid copepod, Delavalia longifurca was found in some parts of the southern Iraqi marshes and the Shatt Al-Arab river during the period 2006-2009. The highest occurrence density was 231 ind./ m3 in Al-Burga marsh during April 2006, whereas a density of 92 ind./ m3 was found in Al-Qurna town (Shatt Al-Arab river) during July 2009. The species was photographed and illustrated and some remarks on their occurrence were given. The specimens of D. longifurca from Basrah were rather distinct from those described earlier from India. Keywords: Delavalia longifurca, Copepoda, Marshes, Shatt Al-Arab river, Basrah, Iraq. Introduction The marshes and Shatt Al-Arab river are large freshwater bodies covering large area in southern Iraq. Several studies on zooplankton were carried out in Shatt Al-Arab river and the southern Iraqi marshes and were focusing on the abundance and distribution of the different groups of zooplankton (Mohammad, 1965; Khalaf & Smirnov, 1976; Al-Saboonchi et al., 1986; Ajeel, 2004; Ajeel et al., 2006; Salman et al., 2014). Environment of Southern Iraq was subjected to some significant changes in salinity and temperature, especially in the last few years which led to substantial variation in species composition and abundance of many organisms. Such changes also caused the intrusion of many marine species into Shatt Al-Arab river and the marshes. -
Copepoda, Harpacticoida, Miraciidae) from the Bohai Sea, China
Zootaxa 1706: 51–68 (2008) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2008 · Magnolia Press ISSN 1175-5334 (online edition) Description of a new species of Onychostenhelia Itô (Copepoda, Harpacticoida, Miraciidae) from the Bohai Sea, China RONY HUYS1,3 & FANG-HONG MU 2 1Department of Zoology, Natural History Museum, Cromwell Road, London SW7 5BD, UK. E-mail: [email protected] 2College of Marine Life Science, Ocean University of China, 5 Yushan Road, Qingdao 266003, China. E-mail: [email protected] 3Corresponding author Abstract Onychostenhelia bispinosa sp. nov. is described from material collected from the Bohai Sea, China. It differs from the type and only known species of Onychostenhelia in the setal formula of the swimming legs, the form of the setae on the baseoendopod of P5 in both sexes, the female rostrum, the structure of the sexually dimorphic P4 exopod in the male, and size. Onychostenhelia, Cladorostrata and Delavalia belong to a core group within the Stenheliinae that exhibits an unusual morphology in the maxillule, the exopod and endopod being confluent at base but not actually fused to the sup- porting basis. Based on this circumstantial evidence it is postulated that in biramous limb patterning both exopodal and endopodal primordia are recruited from a common precursor and, consequently, patterns of axial diversification in crus- tacean limbs and the mechanisms of segmentation that establish them may have to be reinterpreted. Previously published evidence supporting the monophyly of the Stenheliinae is reviewed and a dichotomous key to the nine genera of the subfamily Stenheliinae provided. Key words: Onychostenhelia bispinosa sp. -
Fishery Circular
'^y'-'^.^y -^..;,^ :-<> ii^-A ^"^m^:: . .. i I ecnnicai Heport NMFS Circular Marine Flora and Fauna of the Northeastern United States. Copepoda: Harpacticoida Bruce C.Coull March 1977 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service NOAA TECHNICAL REPORTS National Marine Fisheries Service, Circulars The major respnnsibilities of the National Marine Fisheries Service (NMFS) are to monitor and assess the abundance and geographic distribution of fishery resources, to understand and predict fluctuationsin the quantity and distribution of these resources, and to establish levels for optimum use of the resources. NMFS is also charged with the development and implementation of policies for managing national fishing grounds, development and enforcement of domestic fisheries regulations, surveillance of foreign fishing off United States coastal waters, and the development and enforcement of international fishery agreements and policies. NMFS also assists the fishing industry through marketing service and economic analysis programs, and mortgage insurance and vessel construction subsidies. It collects, analyzes, and publishes statistics on various phases of the industry. The NOAA Technical Report NMFS Circular series continues a series that has been in existence since 1941. The Circulars are technical publications of general interest intended to aid conservation and management. Publications that review in considerable detail and at a high technical level certain broad areas of research appear in this series. Technical papers originating in economics studies and from management in- vestigations appear in the Circular series. NOAA Technical Report NMFS Circulars arc available free in limited numbers to governmental agencies, both Federal and State. They are also available in exchange for other scientific and technical publications in the marine sciences. -
Crustacea, Copepoda, Harpacticoida)
A peer-reviewed open-access journal ZooKeys 411: 105–143Morphological (2014) and molecular affinities of two East Asian species of Stenhelia... 105 doi: 10.3897/zookeys.411.7346 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research Morphological and molecular affinities of two East Asian species of Stenhelia (Crustacea, Copepoda, Harpacticoida) Tomislav Karanovic1,2, Kichoon Kim1, Wonchoel Lee1 1 Hanyang University, Department of Life Sciences, Seoul 133-791, Korea 2 University of Tasmania, Institute for Marine and Antarctic Studies, Hobart, Tasmania 7001, Australia Corresponding author: Tomislav Karanovic ([email protected]) Academic editor: D. Defaye | Received 20 February 2014 | Accepted 2 May 2014 | Published 27 May 2014 Citation: Karanovic T, Kim K, Lee W (2014) Morphological and molecular affinities of two East Asian species of Stenhelia (Crustacea, Copepoda, Harpacticoida). ZooKeys 411: 105–143. doi: 10.3897/zookeys.411.7346 Abstract Definition of monophyletic supraspecific units in the harpacticoid subfamily Stenheliinae Brady, 1880 has been considered problematic and hindered by the lack of molecular or morphology based phylogenies, as well as by incomplete original descriptions of many species. Presence of a modified seta on the fifth leg endopod has been suggested recently as a synapomorphy of eight species comprising the redefined genus Stenhelia Boeck, 1865, although its presence was not known in S. pubescens Chislenko, 1978. We rede- scribe this species in detail here, based on our freshly collected topotypes from the Russian Far East. The other species redescribed in this paper was collected from the southern coast of South Korea and identified as the Chinese S. taiae Mu & Huys, 2002, which represents its second record ever and the first one in Korea. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
A New Minute Ectosymbiotic Harpacticoid Copepod Living on the Sea Cucumber Eupentacta Fraudatrix in the East/Japan Sea
A new minute ectosymbiotic harpacticoid copepod living on the sea cucumber Eupentacta fraudatrix in the East/Japan Sea Jisu Yeom1, Mikhail A. Nikitin2, Viatcheslav N. Ivanenko3 and Wonchoel Lee1 1 Department of Life Science, Hanyang University, Seoul, South Korea 2 A.N. Belozersky Institute of Physico-chemical Biology, Lomonosov Moscow State University, Moscow, Russia 3 Department of Invertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, Moscow, Russia ABSTRACT The ectosymbiotic copepods, Vostoklaophonte eupenta gen. & sp. nov. associated with the sea cucumber Eupentacta fraudatrix, was found in the subtidal zone of Peter the Great Bay, East/Japan Sea. The new genus, Vostoklaophonte, is similar to Microchelonia in the flattened body form, reduced mandible, maxillule and maxilla, but with well-developed prehensile maxilliped, and in the reduced segmentation and setation of legs 1–5. Most appendages of the new genus are more primitive than those of Microchelonia. The inclusion of the symbiotic genera Microchelonia and Vostoklaophonte gen. nov. in Laophontidae, as well as their close phylogenetic relationships, are supported by morphological observations and molecular data. This is the third record of laophontid harpacticoid copepods living in symbiosis with sea cucumbers recorded from the Korean and Californian coasts. Subjects Biodiversity, Marine Biology, Taxonomy Keywords Copepoda, Laophontidae, Eupentacta fraudatrix, Ectosymbiosis, New genus, 18S rDNA INTRODUCTION 21 December 2017 Submitted Symbiotic harpacticoids that use holothurians as hosts are rarely reported compared to Accepted 16 May 2018 Published 14 June 2018 the orders Poecilostomatoida and Siphonostomatoida (Humes, 1980; Ho, 1982; Jangoux, Corresponding author 1990; Mahatma, Arbizu & Ivanenko, 2008; Avdeev, 2017). Among harpacticoids, only one Wonchoel Lee, [email protected] species of Tisbidae Stebbing, 1910—Sacodiscus humesi Stock, 1960— and two species of Academic editor Laophontidae T. -
Calibration of the Multi-Gene Metabarcoding Approach As an Efficient and Accurate Biomonitoring Tool
Calibration of the multi-gene metabarcoding approach as an efficient and accurate biomonitoring tool Guang Kun Zhang Department of Biology McGill University, Montréal April 2017 A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Master of Science © Guang Kun Zhang 2017 1 TABLE OF CONTENTS Abstract .................................................................................................................. 3 Résumé .................................................................................................................... 4 Acknowledgements ................................................................................................ 5 Contributions of Authors ...................................................................................... 6 General Introduction ............................................................................................. 7 References ..................................................................................................... 9 Manuscript: Towards accurate species detection: calibrating metabarcoding methods based on multiplexing multiple markers.................................................. 13 References ....................................................................................................32 Tables ...........................................................................................................41 Figures ........................................................................................................