Diversity and Community Structure of Harpacticoid Copepods Associated
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Zootaxa 1285: 1–19 (2006) ISSN 1175-5326 (Print Edition) ZOOTAXA 1285 Copyright © 2006 Magnolia Press ISSN 1175-5334 (Online Edition)
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Ghent University Academic Bibliography Zootaxa 1285: 1–19 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1285 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) A checklist of the marine Harpacticoida (Copepoda) of the Caribbean Sea EDUARDO SUÁREZ-MORALES1, MARLEEN DE TROCH 2 & FRANK FIERS 3 1El Colegio de la Frontera Sur (ECOSUR), A.P. 424, 77000 Chetumal, Quintana Roo, Mexico; Research Asso- ciate, National Museum of Natural History, Smithsonian Institution, Wahington, D.C. E-mail: [email protected] 2Ghent University, Biology Department, Marine Biology Section, Campus Sterre, Krijgslaan 281–S8, B-9000 Gent, Belgium. E-mail: [email protected] 3Royal Belgian Institute of Natural Sciences, Invertebrate Section, Vautierstraat 29, B-1000, Brussels, Bel- gium. E-mail: [email protected] Abstract Recent surveys on the benthic harpacticoids in the northwestern sector of the Caribbean have called attention to the lack of a list of species of this diverse group in this large tropical basin. A first checklist of the Caribbean harpacticoid copepods is provided herein; it is based on records in the literature and on our own data. Records from the adjacent Bahamas zone were also included. This complete list includes 178 species; the species recorded in the Caribbean and the Bahamas belong to 33 families and 94 genera. Overall, the most speciose family was the Miraciidae (27 species), followed by the Laophontidae (21), Tisbidae (17), and Ameiridae (13). Up to 15 harpacticoid families were represented by one or two species only. -
Emergent and Non-Emergent Species of Harpacticoid Copepods Can Be Recognized Morphologically
MARINE ECOLOGY PROGRESS SERIES Vol. 266: 195–200, 2004 Published January 30 Mar Ecol Prog Ser Emergent and non-emergent species of harpacticoid copepods can be recognized morphologically David Thistle*, Linda Sedlacek Department of Oceanography, Florida State University, Tallahassee, Florida 32306-4320, USA ABSTRACT: Emergence — the active movement of benthic organisms into the water column and back — has consequences for many ecological processes, e.g. benthopelagic coupling. Harpacticoid copepods are conspicuous emergers, but technical challenges have made it difficult to determine which species emerge, impeding the study of the ecology and evolution of the phenomenon. We examined data on harpacticoid emergence from 2 sandy, subtidal sites (~20 m deep) in the northern Gulf of Mexico and found 6 species that always emerged and 2 species that never emerged. An examination of the locomotor appendages revealed that the number of segments in the endopods of pereiopods 2–4 and the number of setae and spines on the distal exopod segments of pereiopods 2–4 can be used to distinguish emergers from non-emergers. We then successfully used these characters to predict the behavior of 3 additional species. Certain morphological differences may therefore allow differentiation of emergers from non-emergers. KEY WORDS: Emergence · Harpacticoid copepods · Continental shelf · Benthopelagic coupling Resale or republication not permitted without written consent of the publisher INTRODUCTION What appear to be emergent harpacticoids have been found in such varied environments as sandy The active movement of individual benthic animals beaches, seagrass meadows, mudflats, coral reefs, and from the seabed into the water column and back, the continental shelf; therefore, harpacticoid emer- often with a diel periodicity, is termed ‘emergence’ gence might be widespread. -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
A Systematic and Experimental Analysis of Their Genes, Genomes, Mrnas and Proteins; and Perspective to Next Generation Sequencing
Crustaceana 92 (10) 1169-1205 CRUSTACEAN VITELLOGENIN: A SYSTEMATIC AND EXPERIMENTAL ANALYSIS OF THEIR GENES, GENOMES, MRNAS AND PROTEINS; AND PERSPECTIVE TO NEXT GENERATION SEQUENCING BY STEPHANIE JIMENEZ-GUTIERREZ1), CRISTIAN E. CADENA-CABALLERO2), CARLOS BARRIOS-HERNANDEZ3), RAUL PEREZ-GONZALEZ1), FRANCISCO MARTINEZ-PEREZ2,3) and LAURA R. JIMENEZ-GUTIERREZ1,5) 1) Sea Science Faculty, Sinaloa Autonomous University, Mazatlan, Sinaloa, 82000, Mexico 2) Coelomate Genomic Laboratory, Microbiology and Genetics Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 3) Advanced Computing and a Large Scale Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 4) Catedra-CONACYT, National Council for Science and Technology, CDMX, 03940, Mexico ABSTRACT Crustacean vitellogenesis is a process that involves Vitellin, produced via endoproteolysis of its precursor, which is designated as Vitellogenin (Vtg). The Vtg gene, mRNA and protein regulation involve several environmental factors and physiological processes, including gonadal maturation and moult stages, among others. Once the Vtg gene, mRNAs and protein are obtained, it is possible to establish the relationship between the elements that participate in their regulation, which could either be species-specific, or tissue-specific. This work is a systematic analysis that compares the similarities and differences of Vtg genes, mRNA and Vtg between the crustacean species reported in databases with respect to that obtained from the transcriptome of Callinectes arcuatus, C. toxotes, Penaeus stylirostris and P. vannamei obtained with MiSeq sequencing technology from Illumina. Those analyses confirm that the Vtg obtained from selected species will serve to understand the process of vitellogenesis in crustaceans that is important for fisheries and aquaculture. RESUMEN La vitelogénesis de los crustáceos es un proceso que involucra la vitelina, producida a través de la endoproteólisis de su precursor llamado Vitelogenina (Vtg). -
Inside:The Pleistocene Cooling Built
THE PLEISTOCENE COOLING BUILT CHALLENGER MOUND, A DEEP-WATER CORAL MOUND IN THE NE ATLANTIC: INSIDE: SYNTHESIS FROM IODP EXPEDITION 307 PLUS: COUNCIL’S COMMENTS 2011 SPRING SEPM SECTION MEETINGS Special Publication #95 Cenozoic Carbonate Systems of Australasia Edited by: William A. Morgan, Annette D. George, Paul M. (Mitch) Harris, Julie A. Kupecz, and J.F. (Rick) Sarg The Cenozoic carbonate systems of Australasia are the product of a diverse assortment of depositional and post- depositional processes, reflecting the interplay of eustasy, tectonics (both plate and local scale), climate, and evolutionary trends that influenced their initiation and development. These systems, which comprise both land- attached and isolated platforms, were initiated in a wide variety of tectonic settings (including rift, passive margin, and arc-related) and under warm and cool-water conditions where, locally, siliciclastic input affected their development. The lithofacies, biofacies, growth morphology, diagenesis, and hydrocarbon reservoir potential of these systems are products of these varying influences. The studies reported in this volume range from syntheses of tectonic and depositional factors influencing carbonate deposition and controls on reservoir formation and petroleum system development, to local studies from the South China Sea, Indonesia, Kalimantan, Malaysia, the Marion Plateau, the Philippines, Western Australia, and New Caledonia that incorporate outcrop and subsurface data, including 3-D seismic imaging of carbonate platforms and facies, to understand the interplay of factors affecting the development of these systems under widely differing circumstances. This volume will be of importance to geoscientists interested in the variability of Cenozoic carbonate systems and the factors that controlled their formation, and to those wanting to understand the range of potential hydrocarbon reservoirs discovered in these carbonates and the events that led to favorable reservoir and trap development. -
ECOLOGY of TIGRIOPUS CALIFORNICUS (COPEPODA, IIARPACTICOIDA) in BARKLEY SOUND, BRITISH COLUMBIA James John Powlik B.Sc. (Hons.)
ECOLOGY OF TIGRIOPUS CALIFORNICUS (COPEPODA, IIARPACTICOIDA) IN BARKLEY SOUND, BRITISH COLUMBIA BY James John Powlik B.Sc. (hons.), The University of British Columbia (1988) M.Sc., The University of British Columbia (1990) A THESIS SUBMJTfED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN THE FACULTY OF GRADUATE STUDIES (Department of Oceanography) WE ACCEPT THIS THESIS AS CONFORMING HyiT)D THE UNIVERSITY OF BRITISH COLUMBIA APRIL, 1996 © James John Powilk, 1996 In presenting this thesis in partial fhffillment of the requirements for an advanced degree at the University ofBritish Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the head of my Department or by his or her representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. 2 Department of Oceanography The University ofBritish Columbia 1461 - 6270 University Blvd. Vancouver, B.C. CANADA V6T 1Z4 Date: ‘ ABSTRACT The thesis addresses several aspects of the habitat characters and population attributes of the splashpool copepod, Tigriopus californicus (Baker) in Barkley Sound, British Columbia. Overall, 90.1% of pools containing T. californicus were found at 3.0 to 5.0 m above lowest normal tide, with an average surface area-to-volume ratio of 7.06. Copepod habitation was found at water temperatures of 6 to 33°C; salinities of less than 1 to 139%; hydrogen ion concentrations (pH) of 6.1 to 9.5; and oxygen levels of 1.1 to 13.7 mg L1. -
Order HARPACTICOIDA Manual Versión Española
Revista IDE@ - SEA, nº 91B (30-06-2015): 1–12. ISSN 2386-7183 1 Ibero Diversidad Entomológica @ccesible www.sea-entomologia.org/IDE@ Class: Maxillopoda: Copepoda Order HARPACTICOIDA Manual Versión española CLASS MAXILLOPODA: SUBCLASS COPEPODA: Order Harpacticoida Maria José Caramujo CE3C – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal. [email protected] 1. Brief definition of the group and main diagnosing characters The Harpacticoida is one of the orders of the subclass Copepoda, and includes mainly free-living epibenthic aquatic organisms, although many species have successfully exploited other habitats, including semi-terrestial habitats and have established symbiotic relationships with other metazoans. Harpacticoids have a size range between 0.2 and 2.5 mm and have a podoplean morphology. This morphology is char- acterized by a body formed by several articulated segments, metameres or somites that form two separate regions; the anterior prosome and the posterior urosome. The division between the urosome and prosome may be present as a constriction in the more cylindric shaped harpacticoid families (e.g. Ectinosomatidae) or may be very pronounced in other familes (e.g. Tisbidae). The adults retain the central eye of the larval stages, with the exception of some underground species that lack visual organs. The harpacticoids have shorter first antennae, and relatively wider urosome than the copepods from other orders. The basic body plan of harpacticoids is more adapted to life in the benthic environment than in the pelagic environment i.e. they are more vermiform in shape than other copepods. Harpacticoida is a very diverse group of copepods both in terms of morphological diversity and in the species-richness of some of the families. -
Taxonomy, Biology and Phylogeny of Miraciidae (Copepoda: Harpacticoida)
TAXONOMY, BIOLOGY AND PHYLOGENY OF MIRACIIDAE (COPEPODA: HARPACTICOIDA) Rony Huys & Ruth Böttger-Schnack SARSIA Huys, Rony & Ruth Böttger-Schnack 1994 12 30. Taxonomy, biology and phytogeny of Miraciidae (Copepoda: Harpacticoida). - Sarsia 79:207-283. Bergen. ISSN 0036-4827. The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, verti cal and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria {Trichodesmium). Rony Huys, Department of Zoology, The Natural History Museum, Cromwell Road, Lon don SW7 5BD, England. - Ruth Böttger-Schnack, Institut für Meereskunde, Düsternbroo- ker Weg 20, D-24105 Kiel, Germany. CONTENTS Introduction.............. .. 207 Genus Distioculus pacticoids can be carried into the open ocean by Material and methods ... .. 208 gen. nov.................. 243 algal rafting. Truly planktonic species which perma Systematics and Distioculus minor nently reside in the water column, however, form morphology .......... -
Background Document for Deep-Sea Sponge Aggregations 2010
Background Document for Deep-sea sponge aggregations Biodiversity Series 2010 OSPAR Convention Convention OSPAR The Convention for the Protection of the La Convention pour la protection du milieu Marine Environment of the North-East Atlantic marin de l'Atlantique du Nord-Est, dite (the “OSPAR Convention”) was opened for Convention OSPAR, a été ouverte à la signature at the Ministerial Meeting of the signature à la réunion ministérielle des former Oslo and Paris Commissions in Paris anciennes Commissions d'Oslo et de Paris, on 22 September 1992. The Convention à Paris le 22 septembre 1992. La Convention entered into force on 25 March 1998. It has est entrée en vigueur le 25 mars 1998. been ratified by Belgium, Denmark, Finland, La Convention a été ratifiée par l'Allemagne, France, Germany, Iceland, Ireland, la Belgique, le Danemark, la Finlande, Luxembourg, Netherlands, Norway, Portugal, la France, l’Irlande, l’Islande, le Luxembourg, Sweden, Switzerland and the United Kingdom la Norvège, les Pays-Bas, le Portugal, and approved by the European Community le Royaume-Uni de Grande Bretagne and Spain. et d’Irlande du Nord, la Suède et la Suisse et approuvée par la Communauté européenne et l’Espagne. Acknowledgement This document has been prepared by Dr Sabine Christiansen for WWF as lead party. Rob van Soest provided contact with the surprisingly large sponge specialist group, of which Joana Xavier (Univ. Amsterdam) has engaged most in commenting on the draft text and providing literature. Rob van Soest, Ole Tendal, Marc Lavaleye, Dörte Janussen, Konstantin Tabachnik, Julian Gutt contributed with comments and updates of their research. -
Patterns of Bathymetric Zonation of Bivalves in the Porcupine Seabight and Adjacent Abyssal Plain, NE Atlantic
ARTICLE IN PRESS Deep-Sea Research I 52 (2005) 15–31 www.elsevier.com/locate/dsr Patterns of bathymetric zonation of bivalves in the Porcupine Seabight and adjacent Abyssal plain, NE Atlantic Celia Olabarriaà Southampton Oceanography Centre, DEEPSEAS Benthic Biology Group, Empress Dock, Southampton SO14 3ZH, UK Received 23 April2004; received in revised form 21 September 2004; accepted 21 September 2004 Abstract Although the organization patterns of fauna in the deep sea have been broadly documented, most studies have focused on the megafauna. Bivalves represent about 10% of the deep-sea macrobenthic fauna, being the third taxon in abundance after polychaetes and peracarid crustaceans. This study, based on a large data set, examined the bathymetric distribution, patterns of zonation and diversity–depth trends of bivalves from the Porcupine Seabight and adjacent Abyssal Plain (NE Atlantic). A total of 131,334 individuals belonging to 76 species were collected between 500 and 4866 m. Most of the species showed broad depth ranges with some ranges extending over more than 3000 m. Furthermore, many species overlapped in their depth distributions. Patterns of zonation were not very strong and faunal change was gradual. Nevertheless, four bathymetric discontinuities, more or less clearly delimited, occurred at about 750, 1900, 2900 and 4100 m. These boundaries indicated five faunistic zones: (1) a zone above 750 m marking the change from shelf species to bathyal species; (2) a zone from 750 to 1900 m that corresponds to the upper and mid- bathyalzones taken together; (3) a lowerbathyalzone from 1900 to 2900 m; (4) a transition zone from 2900 to 4100 m where the bathyal fauna meets and overlaps with the abyssal fauna and (5) a truly abyssal zone from approximately 4100–4900 m (the lower depth limit of this study), characterized by the presence of abyssal species with restricted depth ranges and a few specimens of some bathyalspecies with very broad distributions. -
Deglacial Upslope Shift of NE Atlantic Intermediate Waters Controlled Slope Erosion and Cold-Water Coral Mound Formation
Deglacial upslope shift of NE Atlantic intermediate waters controlled slope erosion and cold-water coral mound formation (Porcupine Seabight, Irish margin) Claudia Wienberg, Jürgen Titschack, Norbert Frank, Ricardo de Pol-Holz, Jan Fietzke, Markus Eisele, Anne Kremer, Dierk Hebbeln To cite this version: Claudia Wienberg, Jürgen Titschack, Norbert Frank, Ricardo de Pol-Holz, Jan Fietzke, et al.. Deglacial upslope shift of NE Atlantic intermediate waters controlled slope erosion and cold-water coral mound formation (Porcupine Seabight, Irish margin). Quaternary Science Reviews, Elsevier, 2020, 237, pp.106310. 10.1016/j.quascirev.2020.106310. hal-02971186 HAL Id: hal-02971186 https://hal.archives-ouvertes.fr/hal-02971186 Submitted on 16 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution - NoDerivatives| 4.0 International License Quaternary Science Reviews 237 (2020) 106310 Contents lists available at ScienceDirect Quaternary Science Reviews journal homepage: www.elsevier.com/locate/quascirev Deglacial -
Fishery Circular
'^y'-'^.^y -^..;,^ :-<> ii^-A ^"^m^:: . .. i I ecnnicai Heport NMFS Circular Marine Flora and Fauna of the Northeastern United States. Copepoda: Harpacticoida Bruce C.Coull March 1977 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service NOAA TECHNICAL REPORTS National Marine Fisheries Service, Circulars The major respnnsibilities of the National Marine Fisheries Service (NMFS) are to monitor and assess the abundance and geographic distribution of fishery resources, to understand and predict fluctuationsin the quantity and distribution of these resources, and to establish levels for optimum use of the resources. NMFS is also charged with the development and implementation of policies for managing national fishing grounds, development and enforcement of domestic fisheries regulations, surveillance of foreign fishing off United States coastal waters, and the development and enforcement of international fishery agreements and policies. NMFS also assists the fishing industry through marketing service and economic analysis programs, and mortgage insurance and vessel construction subsidies. It collects, analyzes, and publishes statistics on various phases of the industry. The NOAA Technical Report NMFS Circular series continues a series that has been in existence since 1941. The Circulars are technical publications of general interest intended to aid conservation and management. Publications that review in considerable detail and at a high technical level certain broad areas of research appear in this series. Technical papers originating in economics studies and from management in- vestigations appear in the Circular series. NOAA Technical Report NMFS Circulars arc available free in limited numbers to governmental agencies, both Federal and State. They are also available in exchange for other scientific and technical publications in the marine sciences.