Background Document for Deep-Sea Sponge Aggregations 2010
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Marais Des Cygnes River Basin Total Maximum Daily Load
MARAIS DES CYGNES RIVER BASIN TOTAL MAXIMUM DAILY LOAD Waterbody: Pomona Lake Water Quality Impairment: Eutrophication & Siltation 1. INTRODUCTION AND PROBLEM IDENTIFICATION Subbasin: Upper Marais Des Cygnes County: Osage, Wabaunsee and Lyon HUC 8: 10290101 HUC 10 (12): 02 (01, 02, 03, 04, 05, 06, 07, 08) Ecoregion: Central Irregular Plains, Osage Cuestas (40b) Flint Hills (28) Drainage Area: 322 square miles Conservation Pool: Surface Area = 3,621 acres Watershed/Lake Ratio: 57:1 Maximum Depth = 38 feet Mean Depth = 16 feet Storage Volume = 55,670 acre feet Estimated Retention Time = 0.45 years Mean Annual Inflow = 149,449 acre feet Mean Annual Discharge = 136,729 acre feet Constructed: 1962 Designated Uses: Primary Contact Recreation Class A; Expected Aquatic Life Support; Domestic Water Supply; Food Procurement; Ground Water Recharge; Industrial Water Supply; Irrigation Use; Livestock Watering Use. 303(d) Listings: 2002, 2004, 2008, 2010 & 2012 Marais Des Cygnes River Basin Lakes Impaired Use: All uses in Pomona Lake are impaired to a degree by eutrophication Water Quality Criteria: General – Narrative: Taste-producing and odor-producing substances of artificial origin shall not occur in surface waters at concentrations that interfere with the production of potable water by conventional water treatment processes, that impart an unpalatable flavor to edible aquatic or semiaquatic life or terrestrial wildlife, or that result in noticeable odors in the vicinity of surface waters (KAR 28-16-28e(b)(7). 1 Nutrients - Narrative: The introduction of plant nutrients into streams, lakes, or wetlands from artificial sources shall be controlled to prevent the accelerated succession or replacement of aquatic biota or the production of undesirable quantities or kinds of aquatic life (KAR 28-16- 28e(c)(2)(A)). -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Sediment Transport in the San Francisco Bay Coastal System: an Overview
Marine Geology 345 (2013) 3–17 Contents lists available at ScienceDirect Marine Geology journal homepage: www.elsevier.com/locate/margeo Sediment transport in the San Francisco Bay Coastal System: An overview Patrick L. Barnard a,⁎, David H. Schoellhamer b,c, Bruce E. Jaffe a, Lester J. McKee d a U.S. Geological Survey, Pacific Coastal and Marine Science Center, Santa Cruz, CA, USA b U.S. Geological Survey, California Water Science Center, Sacramento, CA, USA c University of California, Davis, USA d San Francisco Estuary Institute, Richmond, CA, USA article info abstract Article history: The papers in this special issue feature state-of-the-art approaches to understanding the physical processes Received 29 March 2012 related to sediment transport and geomorphology of complex coastal–estuarine systems. Here we focus on Received in revised form 9 April 2013 the San Francisco Bay Coastal System, extending from the lower San Joaquin–Sacramento Delta, through the Accepted 13 April 2013 Bay, and along the adjacent outer Pacific Coast. San Francisco Bay is an urbanized estuary that is impacted by Available online 20 April 2013 numerous anthropogenic activities common to many large estuaries, including a mining legacy, channel dredging, aggregate mining, reservoirs, freshwater diversion, watershed modifications, urban run-off, ship traffic, exotic Keywords: sediment transport species introductions, land reclamation, and wetland restoration. The Golden Gate strait is the sole inlet 9 3 estuaries connecting the Bay to the Pacific Ocean, and serves as the conduit for a tidal flow of ~8 × 10 m /day, in addition circulation to the transport of mud, sand, biogenic material, nutrients, and pollutants. -
Inside:The Pleistocene Cooling Built
THE PLEISTOCENE COOLING BUILT CHALLENGER MOUND, A DEEP-WATER CORAL MOUND IN THE NE ATLANTIC: INSIDE: SYNTHESIS FROM IODP EXPEDITION 307 PLUS: COUNCIL’S COMMENTS 2011 SPRING SEPM SECTION MEETINGS Special Publication #95 Cenozoic Carbonate Systems of Australasia Edited by: William A. Morgan, Annette D. George, Paul M. (Mitch) Harris, Julie A. Kupecz, and J.F. (Rick) Sarg The Cenozoic carbonate systems of Australasia are the product of a diverse assortment of depositional and post- depositional processes, reflecting the interplay of eustasy, tectonics (both plate and local scale), climate, and evolutionary trends that influenced their initiation and development. These systems, which comprise both land- attached and isolated platforms, were initiated in a wide variety of tectonic settings (including rift, passive margin, and arc-related) and under warm and cool-water conditions where, locally, siliciclastic input affected their development. The lithofacies, biofacies, growth morphology, diagenesis, and hydrocarbon reservoir potential of these systems are products of these varying influences. The studies reported in this volume range from syntheses of tectonic and depositional factors influencing carbonate deposition and controls on reservoir formation and petroleum system development, to local studies from the South China Sea, Indonesia, Kalimantan, Malaysia, the Marion Plateau, the Philippines, Western Australia, and New Caledonia that incorporate outcrop and subsurface data, including 3-D seismic imaging of carbonate platforms and facies, to understand the interplay of factors affecting the development of these systems under widely differing circumstances. This volume will be of importance to geoscientists interested in the variability of Cenozoic carbonate systems and the factors that controlled their formation, and to those wanting to understand the range of potential hydrocarbon reservoirs discovered in these carbonates and the events that led to favorable reservoir and trap development. -
Bioactive Compounds from the Marine Sponge Geodia Barretti
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 32 Bioactive Compounds from the Marine Sponge Geodia barretti Characterization, Antifouling Activity and Molecular Targets MARTIN SJÖGREN ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 UPPSALA ISBN 91-554-6534-X 2006 urn:nbn:se:uu:diva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eodia barretti , s y m ' i " Balanus improvius a ' 56C! ! %& ' ! ' ( )*+' ' ,-*)./0 ' # E ./0' #$ 4..5 $6$%# 4.5 %676$768 -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
SEDIMENTARY FRAMEWORK of Lmainland FRINGING REEF DEVELOPMENT, CAPE TRIBULATION AREA
GREAT BARRIER REEF MARINE PARK AUTHORITY TECHNICAL MEMORANDUM GBRMPA-TM-14 SEDIMENTARY FRAMEWORK OF lMAINLAND FRINGING REEF DEVELOPMENT, CAPE TRIBULATION AREA D.P. JOHNSON and RM.CARTER Department of Geology James Cook University of North Queensland Townsville, Q 4811, Australia DATE November, 1987 SUMMARY Mainland fringing reefs with a diverse coral fauna have developed in the Cape Tribulation area primarily upon coastal sedi- ment bodies such as beach shoals and creek mouth bars. Growth on steep rocky headlands is minor. The reefs have exten- sive sandy beaches to landward, and an irregular outer margin. Typically there is a raised platform of dead nef along the outer edge of the reef, and dead coral columns lie buried under the reef flat. Live coral growth is restricted to the outer reef slope. Seaward of the reefs is a narrow wedge of muddy, terrigenous sediment, which thins offshore. Beach, reef and inner shelf sediments all contain 50% terrigenous material, indicating the reefs have always grown under conditions of heavy terrigenous influx. The relatively shallow lower limit of coral growth (ca 6m below ADD) is typical of reef growth in turbid waters, where decreased light levels inhibit coral growth. Radiocarbon dating of material from surveyed sites confirms the age of the fossil coral columns as 33304110 ybp, indicating that they grew during the late postglacial sea-level high (ca 5500-6500 ybp). The former thriving reef-flat was killed by a post-5500 ybp sea-level fall of ca 1 m. Although this study has not assessed the community structure of the fringing reefs, nor whether changes are presently occur- ring, it is clear the corals present today on the fore-reef slope have always lived under heavy terrigenous influence, and that the fossil reef-flat can be explained as due to the mid-Holocene fall in sea-level. -
Functional Equivalence and Evolutionary Convergence In
Functional equivalence and evolutionary convergence PNAS PLUS in complex communities of microbial sponge symbionts Lu Fana,b, David Reynoldsa,b, Michael Liua,b, Manuel Starkc,d, Staffan Kjelleberga,b,e, Nicole S. Websterf, and Torsten Thomasa,b,1 aSchool of Biotechnology and Biomolecular Sciences and bCentre for Marine Bio-Innovation, University of New South Wales, Sydney, New South Wales 2052, Australia; cInstitute of Molecular Life Sciences and dSwiss Institute of Bioinformatics, University of Zurich, 8057 Zurich, Switzerland; eSingapore Centre on Environmental Life Sciences Engineering, Nanyang Technological University, Republic of Singapore; and fAustralian Institute of Marine Science, Townsville, Queensland 4810, Australia Edited by W. Ford Doolittle, Dalhousie University, Halifax, NS, Canada, and approved May 21, 2012 (received for review February 24, 2012) Microorganisms often form symbiotic relationships with eukar- ties (11, 12). Symbionts also can be transmitted vertically through yotes, and the complexity of these relationships can range from reproductive cells and larvae, as has been demonstrated in those with one single dominant symbiont to associations with sponges (13, 14), insects (15), ascidians (16), bivalves (17), and hundreds of symbiont species. Microbial symbionts occupying various other animals (18). Vertical transmission generally leads equivalent niches in different eukaryotic hosts may share func- to microbial communities with limited variation in taxonomy and tional aspects, and convergent genome evolution has been function among host individuals. reported for simple symbiont systems in insects. However, for Niches with similar selections may exist in phylogenetically complex symbiont communities, it is largely unknown how prev- divergent hosts that lead comparable lifestyles or have similar alent functional equivalence is and whether equivalent functions physiological properties. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Comparing Deep-Sea Sponges of the Species Geodia Barretti from Different Locations in the North Atlantic
Comparing deep-sea sponges of the species Geodia barretti from different locations in the North Atlantic Isabel Ordaz Németh The study of genetic and geographic structures of populations for poorly studied species is not exactly straightforward. It is difficult to accurately compare populations of a species from which no genetic data is available. So, is there a way of comparing populations of such as species? There is one possibility, which is by using genetic markers called “Exon-Primed Intron- Crossing” (EPIC) markers. These markers, which are first designed for well-studied species, find a specific piece of DNA that all individuals of a species have. So, by using the markers we can, for example, take the same DNA fragment from several individuals that come from different locations. Then we translate the DNA fragments of these individuals and look at how different they are. This can give us a lot of information about the relationships within and between the populations of a species, as well as its history. Since a lot of genetic information is conserved across different species, we can test these markers on a species that we barely know, and the probability of finding a corresponding DNA fragment can still be quite high. EPIC markers could be very useful for different studies but they haven’t been extensively used since they are relatively new. In this project, the markers were tested on samples of the deep-sea sponge Geodia barretti. The sponges that were used came from different locations; from the Mediterranean Sea, to the coast of Norway, and all the way to the other side of the Atlantic, by the Eastern coast of Canada. -
United Nations Unep/Med Wg.474/3 United
UNITED NATIONS UNEP/MED WG.474/3 UNITED NATIONS ENVIRONMENT PROGRAMME MEDITERRANEAN ACTION PLAN 24 Avril 2019 Original: English Meeting of the Ecosystem Approach of Correspondence Group on Monitoring (CORMON), Biodiversity and Fisheries. Rome, Italy, 12-13 May 2019 Agenda item 3: Guidance on monitoring marine benthic habitats (Common Indicators 1 and 2) Monitoring protocols of the Ecosystem Approach Common Indicators 1 and 2 related to marine benthic habitats For environmental and economy reasons, this document is printed in a limited number and will not be distributed at the meeting. Delegates are kindly requested to bring their copies to meetings and not to request additional copies. UNEP/MAP SPA/RAC - Tunis, 2019 Note by the Secretariat The 19th Meeting of the Contracting Parties to the Barcelona Convention (COP 19) agreed on the Integrated Monitoring and Assessment Programme (IMAP) of the Mediterranean Sea and Coast and Related Assessment Criteria which set, in its Decision IG.22/7, a specific list of 27 common indicators (CIs) and Good Environmental Status (GES) targets and principles of an integrated Mediterranean Monitoring and Assessment Programme. During the initial phase of the IMAP implementation (2016-2019), the Contracting parties to the Barcelona Convention updated the existing national monitoring and assessment programmes following the Decision requirements in order to provide all the data needed to assess whether ‘‘Good Environmental Status’’ defined through the Ecosystem Approach process has been achieved or maintained. In line with IMAP, Guidance Factsheets were developed, reviewed and agreed by the Meeting of the Ecosystem Approach Correspondence Group on Monitoring (CORMON) Biodiversity and Fisheries (Madrid, Spain, 28 February-1 March 2017) and the Meeting of the SPA/RAC Focal Points (Alexandria, Egypt, 9-12 May 2017) for the Common Indicators to ensure coherent monitoring. -
Patterns of Bathymetric Zonation of Bivalves in the Porcupine Seabight and Adjacent Abyssal Plain, NE Atlantic
ARTICLE IN PRESS Deep-Sea Research I 52 (2005) 15–31 www.elsevier.com/locate/dsr Patterns of bathymetric zonation of bivalves in the Porcupine Seabight and adjacent Abyssal plain, NE Atlantic Celia Olabarriaà Southampton Oceanography Centre, DEEPSEAS Benthic Biology Group, Empress Dock, Southampton SO14 3ZH, UK Received 23 April2004; received in revised form 21 September 2004; accepted 21 September 2004 Abstract Although the organization patterns of fauna in the deep sea have been broadly documented, most studies have focused on the megafauna. Bivalves represent about 10% of the deep-sea macrobenthic fauna, being the third taxon in abundance after polychaetes and peracarid crustaceans. This study, based on a large data set, examined the bathymetric distribution, patterns of zonation and diversity–depth trends of bivalves from the Porcupine Seabight and adjacent Abyssal Plain (NE Atlantic). A total of 131,334 individuals belonging to 76 species were collected between 500 and 4866 m. Most of the species showed broad depth ranges with some ranges extending over more than 3000 m. Furthermore, many species overlapped in their depth distributions. Patterns of zonation were not very strong and faunal change was gradual. Nevertheless, four bathymetric discontinuities, more or less clearly delimited, occurred at about 750, 1900, 2900 and 4100 m. These boundaries indicated five faunistic zones: (1) a zone above 750 m marking the change from shelf species to bathyal species; (2) a zone from 750 to 1900 m that corresponds to the upper and mid- bathyalzones taken together; (3) a lowerbathyalzone from 1900 to 2900 m; (4) a transition zone from 2900 to 4100 m where the bathyal fauna meets and overlaps with the abyssal fauna and (5) a truly abyssal zone from approximately 4100–4900 m (the lower depth limit of this study), characterized by the presence of abyssal species with restricted depth ranges and a few specimens of some bathyalspecies with very broad distributions.