A Combined Morphological and Molecular Phylogenetic Analysis of Parthenocissus (Vitaceae) and Taxonomic Implications
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1 History of Vitaceae Inferred from Morphology-Based
HISTORY OF VITACEAE INFERRED FROM MORPHOLOGY-BASED PHYLOGENY AND THE FOSSIL RECORD OF SEEDS By IJU CHEN A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2009 1 © 2009 Iju Chen 2 To my parents and my sisters, 2-, 3-, 4-ju 3 ACKNOWLEDGMENTS I thank Dr. Steven Manchester for providing the important fossil information, sharing the beautiful images of the fossils, and reviewing the dissertation. I thank Dr. Walter Judd for providing valuable discussion. I thank Dr. Hongshan Wang, Dr. Dario de Franceschi, Dr. Mary Dettmann, and Dr. Peta Hayes for access to the paleobotanical specimens in museum collections, Dr. Kent Perkins for arranging the herbarium loans, Dr. Suhua Shi for arranging the field trip in China, and Dr. Betsy R. Jackes for lending extant Australian vitaceous seeds and arranging the field trip in Australia. This research is partially supported by National Science Foundation Doctoral Dissertation Improvement Grants award number 0608342. 4 TABLE OF CONTENTS page ACKNOWLEDGMENTS ...............................................................................................................4 LIST OF TABLES...........................................................................................................................9 LIST OF FIGURES .......................................................................................................................11 ABSTRACT...................................................................................................................................14 -
Number 3, Spring 1998 Director’S Letter
Planning and planting for a better world Friends of the JC Raulston Arboretum Newsletter Number 3, Spring 1998 Director’s Letter Spring greetings from the JC Raulston Arboretum! This garden- ing season is in full swing, and the Arboretum is the place to be. Emergence is the word! Flowers and foliage are emerging every- where. We had a magnificent late winter and early spring. The Cornus mas ‘Spring Glow’ located in the paradise garden was exquisite this year. The bright yellow flowers are bright and persistent, and the Students from a Wake Tech Community College Photography Class find exfoliating bark and attractive habit plenty to photograph on a February day in the Arboretum. make it a winner. It’s no wonder that JC was so excited about this done soon. Make sure you check of themselves than is expected to seedling selection from the field out many of the special gardens in keep things moving forward. I, for nursery. We are looking to propa- the Arboretum. Our volunteer one, am thankful for each and every gate numerous plants this spring in curators are busy planting and one of them. hopes of getting it into the trade. preparing those gardens for The magnolias were looking another season. Many thanks to all Lastly, when you visit the garden I fantastic until we had three days in our volunteers who work so very would challenge you to find the a row of temperatures in the low hard in the garden. It shows! Euscaphis japonicus. We had a twenties. There was plenty of Another reminder — from April to beautiful seven-foot specimen tree damage to open flowers, but the October, on Sunday’s at 2:00 p.m. -
Vitaceae) Based on Three Chloroplast Markers1
American Journal of Botany 93(2): 278–287. 2006. PHYLOGENETIC ANALYSIS OF THE GRAPE FAMILY (VITACEAE) BASED ON THREE CHLOROPLAST MARKERS1 AKIKO SOEJIMA2 AND JUN WEN3,4 2Department of Biological Science, School of Science, Osaka Prefecture University, Sakai, Osaka 599-8531, Japan; 3Department of Botany, National Museum of Natural History, MRC166, Smithsonian Institution, Washington, D.C. 20013-7012 USA; and Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Nanxinchun 20, Xiangshan, Beijing 100093, P. R. China Seventy-nine species representing 12 genera of Vitaceae were sequenced for the trnL-F spacer, 37 of which were subsequently sequenced for the atpB-rbcL spacer and the rps16 intron. Phylogenetic analysis of the combined data provided a fairly robust phylogeny for Vitaceae. Cayratia, Tetrastigma, and Cyphostemma form a clade. Cyphostemma and Tetrastigma are each monophyletic, and Cayratia may be paraphyletic. Ampelopsis is paraphyletic with the African Rhoicissus and the South American Cissus striata nested within it. The pinnately leaved Ampelopsis form a subclade, and the simple and palmately leaved Ameplopsis constitutes another with both subclades containing Asian and American species. Species of Cissus from Asia and Central America are monophyletic, but the South American C. striata does not group with other Cissus species. The Asian endemic Nothocissus and Pterisanthes form a clade with Asian Ampelocissus, and A. javalensis from Central America is sister to this clade. Vitis is monophyletic and forms a larger clade with Ampelocissus, Pterisanthes, and Nothocissus. The eastern Asian and North American disjunct Parthenocissus forms a clade with Yua austro-orientalis, a species of a small newly recognized genus from China to eastern Himalaya. -
Thèse De Doctorat De L'université De Strasbourg Présentée Par Sophie
Thèse de doctorat de l’Université de Strasbourg Ecole doctorale des Sciences de la vie et de la Santé Spécialité : Agronomie Présentée par Sophie BLANC Pour l’obtention du titre de Docteur de l’Université de Strasbourg CARTOGRAPHIE GENETIQUE ET ANALYSE DE LA RESISTANCE AU MILDIOU ET A L’OÏDIUM DE LA VIGNE CHEZ MUSCADINIA ROTUNDIFOLIA Présentée le 29 novembre 2012, à Colmar Membres du Jury : Charles-Eric DUREL Directeur de Recherche Rapporteur Valérie GEFFROY Chargée de Recherche Rapporteur Marie-France CORIO-COSTET Directeur de Recherche Examinateur Serge POTIER Professeur Examinateur Didier MERDINOGLU Directeur de Recherche Directeur de thèse Pere MESTRE Chargé de Recherche Co-encadrant de thèse II Each time I think I've reached a limit there's a door, it opens, and the limit is gone. - HERBERT NITSCH - Recordman du monde de plongée en apnée 2007, 2009 et 2010 III IV REMERCIEMENTS REMERCIEMENTS Je tiens tout d’abord à remercier chaleureusement les membres de mon jury, Charles- Eric Durel, Valérie Geffroy, Marie-France Corio-Costet et Serge Potier, pour avoir accepté d’évaluer mon travail. Je remercie également Anne-Françoise Adam-Blondon et Véronique Lefebvre d’avoir accompagné mon travail durant ces 3 ans, à travers la tenue de mes comités de thèse. Merci à Didier Merdinoglu, mon directeur de thèse, de m’avoir encouragée et soutenue depuis le début dans la réalisation de ce projet. Merci de ta confiance, Didier, et merci de m’inciter à donner le meilleur de moi-même. Un très grand merci à Pere Mestre pour son excellent co-encadrement, sa disponibilité et ses corrections pertinentes, tant sur l’article que sur le mémoire de thèse. -
Molecular and Structural Characterization of the Candidate Enzymes Responsible for Tartaric Acid Synthesis in the Grapevine by Yong Jia
Molecular and structural characterization of the candidate enzymes responsible for tartaric acid synthesis in the grapevine By Yong Jia Thesis by a combination of conventional and publication formats submitted to The University of Adelaide for the degree of Doctor of Philosophy The University of Adelaide School of Agriculture Food and Wine November 2015 1 Table of Contents Abstract ............................................................................................................................................ 5 Declaration ....................................................................................................................................... 8 Statement of the contributions of jointly authored papers and manuscripts ............................ 9 Acknowledgement ......................................................................................................................... 10 Chapter 1 Introduction ................................................................................................................. 11 1.1 General introduction ........................................................................................................... 12 1.2 The chemistry of tartaric acid ............................................................................................ 16 1.3 Unequal distribution in higher plants ............................................................................... 18 1.4 Tartaric acid in grape and wine ........................................................................................ -
Diversity and Evolution of Vitaceae in the Philippines
Philippine Journal of Science 142: 223-244, Special Issue ISSN 0031 - 7683 Date Received: ?? ???????? 2013 Diversity and Evolution of Vitaceae in the Philippines Jun Wen1, Limin Lu2, and John K. Boggan1 1 Department of Botany, MRC-166, Smithsonian Institution, PO Box 37012, Washington, DC 20013-7012, U.S.A. 2 State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China Vitaceae is economically well-known for grapes and ecologically important as major lianas in tropical and temperate forests. This study analyzes the assembly of taxa of Vitaceae in the Philippines in the phylogenetic framework using five chloroplast DNA markers and enumerates the taxonomy of Vitaceae in the Philippines. The results suggest active floristic exchanges between the Philippines and other parts of Asia and Australia in the Miocene and Pliocene with some elements in the Oligocene. The taxonomic study recognizes seven genera and 55 species. Two new species are validly published and four new combinations are made: Ampelocissus sinuosa (Merr.) J. Wen & Boggan, comb. nov.; Causonis corniculata (Benth.) J. Wen & L.M. Lu, comb. nov.; Causonis pterita (Merr.) J. Wen & L.M. Lu, comb. nov.; Tetrastigma simplicifolia (Merr.) J. Wen & Boggan, comb. nov.; Tetrastigma silvestrei Elmer ex J. Wen & Boggan, sp. nov., and Cayratia coi J. Wen & Boggan, sp. nov. The last species is named in honor of Leonardo Co. Key Words: Vitaceae, Philippines, phylogeny, taxonomy, Ampelocissus, Ampelopsis, Causonis, Cayratia, Cissus, Cyphostemma, Parthenocissus, Pterisanthes, Rafflesia, Nothocissus, Tetrastigma, Vitis INTRODUCTION have suggested the need to redefine several genera. Cayratia Juss., Cyphostemma (Planch.) Alston and Tetrastigma were Vitaceae (the grape family) consists of about 14 genera and supported to form a clade by all these analyses and the 900 species primarily distributed in tropical regions (Wen monophyly of Cyphostemma and Tetrastigma was each 2007a).