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Molecular Phylogeny of Mugilidae (Teleostei: Perciformes) D
The Open Marine Biology Journal, 2008, 2, 29-37 29 Molecular Phylogeny of Mugilidae (Teleostei: Perciformes) D. Aurelle1, R.-M. Barthelemy*,2, J.-P. Quignard3, M. Trabelsi4 and E. Faure2 1UMR 6540 DIMAR, Station Marine d'Endoume, Rue de la Batterie des Lions, 13007 Marseille, France 2LATP, UMR 6632, Evolution Biologique et Modélisation, case 18, Université de Provence, 3 Place Victor Hugo, 13331 Marseille Cedex 3, France 3Laboratoire d’Ichtyologie, Université Montpellier II, 34095 Montpellier, France 4Unité de Biologie marine, Faculté des Sciences, Campus Universitaire, 2092 Manar II, Tunis, Tunisie Abstract: Molecular phylogenetic relationships among five genera and twelve Mugilidae species were investigated us- ing published mitochondrial cytochrome b and 16S rDNA sequences. These analyses suggested the paraphyly of the genus Liza and also that the separation of Liza, Chelon and Oedalechilus might be unnatural. Moreover, all the species of the genus Mugil plus orthologs of Crenimugil crenilabis clustered together; however, molecular analyses suggested possible introgressions in Mugil cephalus and moreover, that fish identified as Mugil curema could correspond to two different species as already shown by karyotypic analyses. Keywords: Mugilidae, grey mullets, mitochondrial DNA, Mugil cephalus, introgression. INTRODUCTION We have focused this study on Mugilid species for which both cytochrome b (cytb) and 16S rDNA mtDNA sequences The family Mugilidae, commonly referred to as grey have been already published. Their geographic distributions mullets, includes several species which have a worldwide are briefly presented here. Oedalechilus labeo is limited to distribution; they inhabit marine, estuarine, and freshwater the Mediterranean Sea and the Moroccan Atlantic coast, environments at all latitudes except the Polar Regions [1]; a whereas, Liza and Chelon inhabit also the Eastern Atlantic few spend all their lives in freshwater [2]. -
PCB Bioaccumulation in Three Mullet Species—A Comparison Study
Ecotoxicology and Environmental Safety 94 (2013) 147–152 Contents lists available at SciVerse ScienceDirect Ecotoxicology and Environmental Safety journal homepage: www.elsevier.com/locate/ecoenv PCB bioaccumulation in three mullet species—A comparison study Joana Baptista a,n, Pedro Pato b,c, Sílvia Tavares a, Armando C. Duarte b, Miguel A. Pardal a a CFE, Center for Functional Ecology, Department of Life Sciences, University of Coimbra, Apartado 3046, 3001-401 Coimbra, Portugal b Department of Chemistry & Center for Environmental and Marine Studies (CESAM), University of Aveiro, 3810-193 Aveiro, Portugal c School of Technology and Management, Polytechnic of Viana do Castelo, Avenida do Atlântico, 4900-348 Viana do Castelo, Portugal article info abstract Article history: Polychlorinated biphenyls (PCBs) are lipophilic contaminants that tend to accumulate in organisms. PCBs Received 21 February 2013 were detected in Chelon labrosus, Liza aurata and Liza ramada, along different age groups. L. ramada Received in revised form presented the highest concentration, and it increased with age, whereas C. labrosus and L. aurata 16 April 2013 concentration remained constant. L. ramada high concentration can be attributed to its ecological niche, Accepted 17 April 2013 since this species is able to accumulate PCBs along its different age groups even in low environmental Available online 2 June 2013 contamination conditions. PCBs 101, 118, 138, 149, 153, 170 and 180 were the congeners that more Keywords: contributed to these species contamination, being PCB 138 and 153 the congeners with higher PCBs concentration. Mullets are edible in many countries, being important in fisheries and aquaculture. Chelon labrosus L. ramada is the most common mullet for capture and human consumption. -
Flora and Fauna
AQUIS RESORT AT THE GREAT BARRIER REEF PTY LTD ENVIRONMENTAL IMPACT STATEMENT VOLUME 1 CHAPTER 7 FLORA AND FAUNA 7. FLORA AND FAUNA 7.1 EXISTING SITUATION 7.1.1 Scope This chapter addresses the matters listed in the ToR under the heading ‘Flora and Fauna’. These ToR include broad matters of environmental significance, ecosystems, and biodiversity and cover a wide range of often interrelated topics. These are discussed as follows: sensitive environmental areas matters of national environmental significance and state environmental significance* terrestrial and aquatic ecosystems* listed flora* listed fauna* listed migratory birds* overall biodiversity ecological processes and integrity* Ramsar wetlands and migratory bird agreements* fish and fisheries resources. Details of threats to biodiversity from pest plants and animals are provided in Chapter 19 (Biosecurity). Matters designated by an asterisk (*) can involve either or both Queensland and Commonwealth legislation. Chapter 22 (Matters of NES) deals specifically with the issues designated above from a Commonwealth perspective. Cross references between these chapters are provided as appropriate. 7.1.2 Information Sources This chapter draws heavily on technical assessments based on terrestrial and aquatic surveys as follows: July 2013 (aquatic – Appendix F; terrestrial – Appendix G) October 2013 (aquatic – Appendix F; terrestrial – Appendix G) February / March 2014 (aquatic – Addendum 1 of Appendix F; terrestrial – Appendix G); off- shore lake pipeline – Appendix H). It also refers to the protected matters search (Appendix I) and a range of government and private data sources. Aquis Resort at The Great Barrier Reef Revision: Final Environmental Impact Statement - June 2014 Page 7-1 7.1.3 Sensitive Environmental Areas Although the site is largely cleared, it is surrounded by remnant coastal vegetation and marine areas, most of which are sensitive environmental areas protected under a raft of Queensland legislation. -
The Danish Fish Fauna During the Warm Atlantic Period (Ca
Atlantic period fish fauna and climate change 1 International Council for the CM 2007/E:03 Exploration of the Sea Theme Session on Marine Biodiversity: A fish and fisheries perspective The Danish fish fauna during the warm Atlantic period (ca. 7,000- 3,900 BC): forerunner of future changes? Inge B. Enghoff1, Brian R. MacKenzie2*, Einar Eg Nielsen3 1Natural History Museum of Denmark (Zoological Museum), University of Copenhagen, DK- 2100 Copenhagen Ø, Denmark; email: [email protected] 2Technical University of Denmark, Danish Institute for Fisheries Research, Department of Marine Ecology and Aquaculture, Kavalergården 6, DK-2920 Charlottenlund, Denmark; email: [email protected] 3Technical University of Denmark, Danish Institute for Fisheries Research, Department of Inland Fisheries, DK-8600 Silkeborg, Denmark; email: [email protected] *corresponding author Citation note: This paper has been accepted for publication in Fisheries Research. Please see doi:10.1016/j.fishres.2007.03.004 and refer to the Fisheries Research article for citation purposes. Abstract: Vast amounts of fish bone lie preserved in Denmark’s soil as remains of prehistoric fishing. Fishing was particularly important during the Atlantic period (ca. 7,000-3,900 BC, i.e., part of the Mesolithic Stone Age). At this time, sea temperature and salinity were higher in waters around Denmark than today. Analyses of more than 100,000 fish bones from various settlements from this period document which fish species were common in coastal Danish waters at this time. This study provides a basis for comparing the fish fauna in the warm Stone Age sea with the tendencies seen and predicted today as a result of rising sea temperatures. -
Training Manual Series No.15/2018
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by CMFRI Digital Repository DBTR-H D Indian Council of Agricultural Research Ministry of Science and Technology Central Marine Fisheries Research Institute Department of Biotechnology CMFRI Training Manual Series No.15/2018 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual This is a limited edition of the CMFRI Training Manual provided to participants of the “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals” organized by the Marine Biotechnology Division of Central Marine Fisheries Research Institute (CMFRI), from 2nd February 2015 - 31st March 2018. Principal Investigator Dr. P. Vijayagopal Compiled & Edited by Dr. P. Vijayagopal Dr. Reynold Peter Assisted by Aditya Prabhakar Swetha Dhamodharan P V ISBN 978-93-82263-24-1 CMFRI Training Manual Series No.15/2018 Published by Dr A Gopalakrishnan Director, Central Marine Fisheries Research Institute (ICAR-CMFRI) Central Marine Fisheries Research Institute PB.No:1603, Ernakulam North P.O, Kochi-682018, India. 2 Foreword Central Marine Fisheries Research Institute (CMFRI), Kochi along with CIFE, Mumbai and CIFA, Bhubaneswar within the Indian Council of Agricultural Research (ICAR) and Department of Biotechnology of Government of India organized a series of training programs entitled “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals”. -
ASFIS ISSCAAP Fish List February 2007 Sorted on Scientific Name
ASFIS ISSCAAP Fish List Sorted on Scientific Name February 2007 Scientific name English Name French name Spanish Name Code Abalistes stellaris (Bloch & Schneider 1801) Starry triggerfish AJS Abbottina rivularis (Basilewsky 1855) Chinese false gudgeon ABB Ablabys binotatus (Peters 1855) Redskinfish ABW Ablennes hians (Valenciennes 1846) Flat needlefish Orphie plate Agujón sable BAF Aborichthys elongatus Hora 1921 ABE Abralia andamanika Goodrich 1898 BLK Abralia veranyi (Rüppell 1844) Verany's enope squid Encornet de Verany Enoploluria de Verany BLJ Abraliopsis pfefferi (Verany 1837) Pfeffer's enope squid Encornet de Pfeffer Enoploluria de Pfeffer BJF Abramis brama (Linnaeus 1758) Freshwater bream Brème d'eau douce Brema común FBM Abramis spp Freshwater breams nei Brèmes d'eau douce nca Bremas nep FBR Abramites eques (Steindachner 1878) ABQ Abudefduf luridus (Cuvier 1830) Canary damsel AUU Abudefduf saxatilis (Linnaeus 1758) Sergeant-major ABU Abyssobrotula galatheae Nielsen 1977 OAG Abyssocottus elochini Taliev 1955 AEZ Abythites lepidogenys (Smith & Radcliffe 1913) AHD Acanella spp Branched bamboo coral KQL Acanthacaris caeca (A. Milne Edwards 1881) Atlantic deep-sea lobster Langoustine arganelle Cigala de fondo NTK Acanthacaris tenuimana Bate 1888 Prickly deep-sea lobster Langoustine spinuleuse Cigala raspa NHI Acanthalburnus microlepis (De Filippi 1861) Blackbrow bleak AHL Acanthaphritis barbata (Okamura & Kishida 1963) NHT Acantharchus pomotis (Baird 1855) Mud sunfish AKP Acanthaxius caespitosa (Squires 1979) Deepwater mud lobster Langouste -
Agilent RFLP Decoder
Agilent Reference Database AB 1 Species Common name 2 Clupea harengus Atlantic herring 3 Dicentrarchus labrax European sea bass 4 Gadus macrocephalus Pacific cod 5 Gadus morhua Atlantic cod 6 Glyptocephalus cynoglossus Witch 7 Hippoglossus stenolepis Pacific halibut 8 Kathetostoma giganteum Giant stargazer 9 Katsuwonus pelamis Skipjack tuna 10 Lophiodes caulinaris Spottedtail angler 11 Lophius americanus Monkfish/American angler 12 Lophius budegassa Monkfish/Black-bellied angler 13 Lophius piscatorius Monkfish/Anglerfish 14 Lophius vaillanti Shortspine African angler 15 Lophius vomerinus Cape monkfish/Cape anglerfish 16 Macruronus novaezelandiae New Zealand hoki 17 Melanogrammus aeglefinus Haddock 18 Merlangius merlangus Whiting 19 Merluccius hubbsi Argentine hake 20 Merluccius merluccius European hake 21 Merluccius paradoxus Deep water cape hake 22 Microstomus kitt Lemon sole 23 Molva molva Ling 24 Mullus surmuletus Striped red mullet 25 Oncorhynchus clarkii clarkii Cut-throat trout 26 Oncorhynchus gorbuscha Pink/Humpback salmon 27 Oncorhynchus keta Keta/Chum salmon 28 Oncorhynchus kisutch Coho/Silver salmon 29 Oncorhynchus masou masou Cherry salmon 30 Oncorhynchus nerka Red/Sockeye salmon 31 Oncorhynchus tshawytscha Chinook/King/Pacific salmon 32 Pangasianodon hypophthalmus Pangasius/Basa/River cobbler 33 Platichthys flesus Flounder 34 Pleuronectes platessa European plaice 35 Pollachius pollachius Pollock 36 Pollachius virens Coley/Saithe 37 Psetta maxima Turbot 38 Reinharditius hippoglossoides Greenland halibut 39 Salmo salar Atlantic -
Some Targeted Reference Points for Thin Lip Grey Mullet Liza Ramada Management in Bardawil Lagoon, North Sinai, Egypt Sahar F
OPEN ACCESS Freely available online Aquacu nd ltu a r e s e J i o r u e r h n s a i Fisheries and Aquaculture Journal l F ISSN: 2150-3508 Research Article Some Targeted Reference Points for Thin Lip Grey Mullet Liza Ramada Management in Bardawil Lagoon, North Sinai, Egypt Sahar F. Mehanna*, Mohammed G. Desouky, Ahmed F. Makkey National Institute of Oceanography and Fisheries, Fisheries Division, Suez, Egypt ABSTRACT The evaluation and management of fisheries resources requires knowledge of spatial and temporal changes in the habitat-associations of fishes as well as studying the biology and dynamics of commercial fishes of that fishery. The thin lip mullet, L. ramada is one of the most important and high valued species in Bardawil lagoon, Egypt. Long term commercial catch statistics show a significant decrease in the commercial landings of grey mullet in Bardawil lagoon since 1995. By learning more about this species and protecting the habitat upon which it depends, we can ensure that this important valuable fish remains abundant. Age was determined based on scale’s readings of fish collected in May 2017 to December 2017 and in May 2018 to October 2018. Growth parameters, mortality rates, exploitation level as well as the critical lengths and ages were estimated. Based on yield per recruit analysis, the mullet fishery in Bardawil lagoon was found to be heavily exploited. The study suggested some applicable reference points for sustaining and optimizing the thin lip grey mullet yield in Bardawil lagoon. Keywords: Egypt; Bardawil lagoon; Mugilidae; Population dynamics; Management INTRODUCTION many detailed information such as age and growth, mortality and exploitation rates should be available. -
The Living Planet Index (Lpi) for Migratory Freshwater Fish Technical Report
THE LIVING PLANET INDEX (LPI) FOR MIGRATORY FRESHWATER FISH LIVING PLANET INDEX TECHNICAL1 REPORT LIVING PLANET INDEXTECHNICAL REPORT ACKNOWLEDGEMENTS We are very grateful to a number of individuals and organisations who have worked with the LPD and/or shared their data. A full list of all partners and collaborators can be found on the LPI website. 2 INDEX TABLE OF CONTENTS Stefanie Deinet1, Kate Scott-Gatty1, Hannah Rotton1, PREFERRED CITATION 2 1 1 Deinet, S., Scott-Gatty, K., Rotton, H., Twardek, W. M., William M. Twardek , Valentina Marconi , Louise McRae , 5 GLOSSARY Lee J. Baumgartner3, Kerry Brink4, Julie E. Claussen5, Marconi, V., McRae, L., Baumgartner, L. J., Brink, K., Steven J. Cooke2, William Darwall6, Britas Klemens Claussen, J. E., Cooke, S. J., Darwall, W., Eriksson, B. K., Garcia Eriksson7, Carlos Garcia de Leaniz8, Zeb Hogan9, Joshua de Leaniz, C., Hogan, Z., Royte, J., Silva, L. G. M., Thieme, 6 SUMMARY 10 11, 12 13 M. L., Tickner, D., Waldman, J., Wanningen, H., Weyl, O. L. Royte , Luiz G. M. Silva , Michele L. Thieme , David Tickner14, John Waldman15, 16, Herman Wanningen4, Olaf F., Berkhuysen, A. (2020) The Living Planet Index (LPI) for 8 INTRODUCTION L. F. Weyl17, 18 , and Arjan Berkhuysen4 migratory freshwater fish - Technical Report. World Fish Migration Foundation, The Netherlands. 1 Indicators & Assessments Unit, Institute of Zoology, Zoological Society 11 RESULTS AND DISCUSSION of London, United Kingdom Edited by Mark van Heukelum 11 Data set 2 Fish Ecology and Conservation Physiology Laboratory, Department of Design Shapeshifter.nl Biology and Institute of Environmental Science, Carleton University, Drawings Jeroen Helmer 12 Global trend Ottawa, ON, Canada 15 Tropical and temperate zones 3 Institute for Land, Water and Society, Charles Sturt University, Albury, Photography We gratefully acknowledge all of the 17 Regions New South Wales, Australia photographers who gave us permission 20 Migration categories 4 World Fish Migration Foundation, The Netherlands to use their photographic material. -
Chelon Labrosus) from the Basque Coast (Bay of Biscay) Applying a Biomarker Based Approach
© 2014 The Japan Mendel Society Cytologia 79(4): 517–533 Hazards of the Endocrine Disruptors on Mullets (Chelon labrosus) from the Basque Coast (Bay of Biscay) Applying a Biomarker Based Approach Iman Abumourad1,2*, Cristina Bizarro1, Pedro Aragón3, Ángel Maquieira3, Asier Vallejo4, Olatz Zuloaga4, Miren López de Alda5, Bayona Josep5, Damia Barceló5, Miren Cagaraville1 and Maren Ortiz-Zarragoitia1 1 CBET Research Group, UPV/EHU, Basque Country, Spain 2 Deparment of Hydrobiology, Veterinary Division, National Research Center, Cairo, Egypt 3 IRMDT, UPV, Valencia, Spain 4 Kimika Analitikoa Saila, UPV/EHU, Basque Country, Spain 5 Deparment of Environmental Chemistry, IIQABCSIC, Barcelona, Catalunya, Spain Received April 14, 2014; accepted July 31, 2014 Summary Biomonitoring programs are essential tools to evaluate the biological quality status of aquatic environments. Recently, several compounds with endocrine disruption ability have been included in the list of priority substances and therefore, implementation of biomarkers assessing the presence and the effects of such substances are required. In the present work we applied a battery of chemical and biological markers in order to study the effects of endocrine disruptors in four thicklip grey mullet (Chelon labrosus) populations from the Basque Country (Bay of Biscay) inhabiting differently polluted estuaries: Arriluze and Pasaia are marinas located in highly industrialized and densely populated areas, Plentzia is a leisure and touristic town and Gernika is located in the Biosphere Reserve of Urdaibai. Chemical analyses of fish bile were performed in order to determine the uptake of endocrine disruptors. Liver, gonad and brain samples were collected for the study of expression levels of genes associated with reproduction and development such as vtg, cyp19a1 and a2, er and rxr. -
Caught by Trammel Net (Ballah) at El-Gamil Region, Manzala Lake, Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 24(1): 281 – 308 (2020) www.ejabf.journals.ekb.eg Current status of Liza ramada (Risso, 1810) (Mugilidae) caught by trammel net (Ballah) at El-Gamil region, Manzala Lake, Egypt El-Azab E. Badr El-Bokhty* and Amal M. Amin Fishing Gear Lab. and Fisheries Biology Lab., NIOF, Alexandria *Corresponding Author:[email protected] ____________________________________________________________________________________ ARTICLE INFO ABSTRACT Article History: Liza ramada, the target species caught by trammel net Received: Dec. 21, 2019 (Ballah) at El-Gamil region, north of Lake Manzala, is Accepted: Jan.28, 2020 studied to estimate the life history parameters by using Online: Feb.8,2020 length–frequency data of 842 specimens. The life span was _______________ estimated as 4 years. It exhibited a negative allometric Keywords: growth (b=2.94). The von Bertalanffy growth parameters −1 −1 Manzala Lake, were L∞= 30.45cm, K= 0.48 yr and t0 =-0.339 yr with a Liza ramada, derived growth performance index of Ø′ =2.6 .The mean age, annual instantaneous total, natural and fishing mortality mortality, coefficients were 1.47, 0.71and 0.76/year, respectively. The exploitation rate exploitation rate was estimated as 0.52. The probability of capture ensured that 50 percent (Lc) of the fish caught was estimated at length 12.18 cm which is 31.2% lower than the length at first sexual maturity (17.7 cm) and lower by 40.1% than the estimated Lopt value (20.4 cm). This result reflects the smaller mesh sizes of the inner layer of nets used by fishermen. -
Evolutionary Morphology of Ligophorus Spp
PROGRAMA DE DOCTORADO EN BIODIVERSIDAD 3001 (1393/2007) EVOLUTIONARY MORPHOLOGY OF LIGOPHORUS SPP. (MONOGENEA: DACTYLOGYRIDAE): A GEOMETRIC MORPHOMETRICS APPROACH Tesis Doctoral por: Abril Rodríguez González Director: Juan Antonio Balbuena Díaz-Pinés Valencia, 2016 D. Juan Antonio Balbuena Díaz-Pinés, Profesor Titular del Departamento de Zoología de la Facultad de Ciencias Biológicas de la Universidad de Valencia, CERTIFICA que Dª Abril Rodríguez González ha realizado bajo mi dirección, y con el mayor aprovechamiento, el trabajo de investigación recogido en esta memoria, y que lleva por título “EVOLUTIONARY MORPHOLOGY OF LIGOPHORUS SPP. (MONOGENEA: DACTYLOGYRIDAE): A GEOMETRIC MORPHOMETRICS APPROACH”, para optar al grado de Doctora en Ciencias Biológicas. Y para que así conste, en cumplimiento de la legislación vigente, expedimos el presente certificado en Valencia, a 2 de noviembre de 2016. Firmado: Juan Antonio Balbuena Díaz-Pinés dedicatoria Con amor a mis padres En primer lugar, debo agradecer sinceramente y de manera especial a mi director de Tesis, Dr. Juan Antonio Balbuena Díaz-Pinés por aceptarme para realizar esta Tesis Doctoral bajo su dirección. Su esfuerzo, dedicación y rigor científico y su capacidad para guiar mis ideas han sido un aporte invaluable y clave en el desarrollo de esta investigación. Sus conocimientos, orientaciones, su manera de trabajar, su persistencia, originalidad, y sobre todo su paciencia han sido fundamentales para mi formación como investigadora. Gracias por tus relevantes aportes y críticas, durante el desarrollo de esta Tesis Doctoral. Agradezco también el haberme facilitado siempre los medios suficientes para llevar a cabo todas las actividades propuestas. Gracias igual por tu amistad y ¡por creer en mí! A las personas que integran la Unidad de Zoología Marina de la Universidad de Valencia, que han estado presentes durante la realización de ésta tesis.