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Fucosylated Chondroitin Sulfates from the Sea Cucumbers Paracaudina Chilensis and Holothuria Hilla: Structures and Anticoagulant Activity
marine drugs Article Fucosylated Chondroitin Sulfates from the Sea Cucumbers Paracaudina chilensis and Holothuria hilla: Structures and Anticoagulant Activity Nadezhda E. Ustyuzhanina 1,*, Maria I. Bilan 1, Andrey S. Dmitrenok 1 , Alexandra S. Silchenko 2, Boris B. Grebnev 2, Valentin A. Stonik 2, Nikolay E. Nifantiev 1 and Anatolii I. Usov 1,* 1 N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia; [email protected] (M.I.B.); [email protected] (A.S.D.); [email protected] (N.E.N.) 2 G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Prospect 100 let Vladivostoku 159, 690022 Vladivostok, Russia; [email protected] (A.S.S.); [email protected] (B.B.G.); [email protected] (V.A.S.) * Correspondence: [email protected] (N.E.U.); [email protected] (A.I.U.); Tel.: +7-495-135-8784 (N.E.U.) Received: 29 September 2020; Accepted: 26 October 2020; Published: 28 October 2020 Abstract: Fucosylated chondroitin sulfates (FCSs) PC and HH were isolated from the sea cucumbers Paracaudina chilensis and Holothuria hilla, respectively. The purification of the polysaccharides was carried out by anion-exchange chromatography on a DEAE-Sephacel column. The structural characterization of the polysaccharides was performed in terms of monosaccharide and sulfate content, as well as using a series of nondestructive NMR spectroscopic methods. Both polysaccharides were shown to contain a chondroitin core [ 3)-β-d-GalNAc (N-acethyl galactosamine)-(1 4)-β-d-GlcA ! ! (glucuronic acid)-(1 ]n, bearing sulfated fucosyl branches at O-3 of every GlcA residue in the ! chain. -
Petition to List the Black Teatfish, Holothuria Nobilis, Under the U.S. Endangered Species Act
Before the Secretary of Commerce Petition to List the Black Teatfish, Holothuria nobilis, under the U.S. Endangered Species Act Photo Credit: © Philippe Bourjon (with permission) Center for Biological Diversity 14 May 2020 Notice of Petition Wilbur Ross, Secretary of Commerce U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected], [email protected] Dr. Neil Jacobs, Acting Under Secretary of Commerce for Oceans and Atmosphere U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected] Petitioner: Kristin Carden, Oceans Program Scientist Sarah Uhlemann, Senior Att’y & Int’l Program Director Center for Biological Diversity Center for Biological Diversity 1212 Broadway #800 2400 NW 80th Street, #146 Oakland, CA 94612 Seattle,WA98117 Phone: (510) 844‐7100 x327 Phone: (206) 324‐2344 Email: [email protected] Email: [email protected] The Center for Biological Diversity (Center, Petitioner) submits to the Secretary of Commerce and the National Oceanographic and Atmospheric Administration (NOAA) through the National Marine Fisheries Service (NMFS) a petition to list the black teatfish, Holothuria nobilis, as threatened or endangered under the U.S. Endangered Species Act (ESA), 16 U.S.C. § 1531 et seq. Alternatively, the Service should list the black teatfish as threatened or endangered throughout a significant portion of its range. This species is found exclusively in foreign waters, thus 30‐days’ notice to affected U.S. states and/or territories was not required. The Center is a non‐profit, public interest environmental organization dedicated to the protection of native species and their habitats. -
Sea Cucumbers
Guide to Species 49 SEA CUCUMBERS The sea cucumber fishery is an importantHoloturia source scabra of livelihood to many households in the coast of KenyaStichopus (Conand ethermani al., 2006), althoughHoloturia they nobilis. are not eaten by local people. There are several commercially important sea cucumber species in Kenya. In the southern coast, is the most commonly landed species, followed by and Sea cucumber catches have significantly decreased over the years. Some low-value species are increasingly getting important to fishers’ catches to make up for the decrease in the size and quantities of high value species. TECHNICAL TERMS AND MEASUREMENTS dorsal podia mouth lateral radius of (papillae) bivium Inter-radiae anus lateral radius of tentacles trivium podia or ventral median radius of ambulacra trivium Sea cucumbers have an orally-aborally elongated body. The body is formed like a short or long cylinder, with the mouth (at the anterior end) encircled by tentacles, and the anus (at the posterior end) often edged by papillae. The pentamerous symmetry is sometimes recognizable by the presence of 5 meridional ambulacra bearing podia. Sea cucumbers often lay on the substrate with their ventral surface or trivium, formed by the radii A, B, and E in the Carpenter system for orientation. This creeping sole bears the locomotory podia, while on the dorsal surface, or bivium, the podia are often represented by papillae. Consequently, a secondary bilateral symmetry is evident. The mouth is terminal or displaced dorsally, surrounded by a thin buccal membrane, and generally bordered by a circle of tentacles. 50 - Holothuriidae HOLOTHURIIDAE Sea Cucumbers Sea cucumbers§ Actinopyga mauritiana FAO names: § § Surf redfish (En) Local name(s): N: § (Quoy & Graimard, 1833) Holothurie brune des brisants (Fr) Habitat: Jongoo; S: Jongoo (M/K). -
Holothuriidae 1165
click for previous page Order Aspidochirotida - Holothuriidae 1165 Order Aspidochirotida - Holothuriidae HOLOTHURIIDAE iagnostic characters: Body dome-shaped in cross-section, with trivium (or sole) usually flattened Dand dorsal bivium convex and covered with papillae. Gonads forming a single tuft appended to the left dorsal mesentery. Tentacular ampullae present, long, and slender. Cuvierian organs present or absent. Dominant spicules in form of tables, buttons (simple or modified), and rods (excluding C-and S-shaped rods). Key to the genera and subgenera of Holothuriidae occurring in the area (after Clark and Rowe, 1971) 1a. Body wall very thick; podia and papillae short, more or less regularly arranged on bivium and trivium; spicules in form of rods, ovules, rosettes, but never as tables or buttons ......→ 2 1b. Body wall thin to thick; podia irregularly arranged on the bivium and scattered papillae on the trivium; spicules in various forms, with tables and/or buttons present ...(Holothuria) → 4 2a. Tentacles 20 to 30; podia ventral, irregularly arranged on the interradii or more regularly on the radii; 5 calcified anal teeth around anus; spicules in form of spinose rods and rosettes ...........................................Actinopyga 2b. Tentacles 20 to 25; podia ventral, usually irregularly arranged, rarely on the radii; no calcified anal teeth around anus, occasionally 5 groups of papillae; spicules in form of spinose and/or branched rods and rosettes ............................→ 3 3a. Podia on bivium arranged in 3 rows; spicules comprise rocket-shaped forms ....Pearsonothuria 3b. Podia on bivium not arranged in 3 rows; spicules not comprising rocket-shaped forms . Bohadschia 4a. Spicules in form of well-developed tables, rods and perforated plates, never as buttons .....→ 5 4b. -
Predator Defense Mechanisms in Shallow Water Sea Cucumbers (Holothuroidea)
PREDATOR DEFENSE MECHANISMS IN SHALLOW WATER SEA CUCUMBERS (HOLOTHUROIDEA) JESSICA A. CASTILLO Environmental Science Policy and Management, University of California, Berkeley, California 94720 USA Abstract. The various predator defense mechanisms possessed by shallow water sea cucumbers were surveyed in twelve different species and morphs. While many defense mechanisms such as the presence of Cuverian tubules, toxic secretions, and unpalatability have been identified in holothurians, I hypothesized that the possession of these traits as well as the degree to which they are utilized varies from species to species. The observed defense mechanisms were compared against a previously-derived phylogeny of the sea cucumbers of Moorea. Furthermore, I hypothesized that while the presence of such structures is most likely a result of the species’ placement on a phylogenetic tree, the degree to which they utilize such structures and their physical behavior are influenced by their individual ecologies. The presence of a red liquid secretion was restricted to individuals of the genus Holothuria (Linnaeus 1767) however not all members of the genus exhibited this trait. With the exception of H. leucospilota, which possessed both Cuverian tubules and a red secretion, Cuverian tubules were observed in members of the genus Bohadschia (Ostergren 1896). In accordance with the hypothesis, both the phylogenetics and individual ecology appear to influence predator defense mechanisms. However, even closely related species of similar ecology may differ considerably. Key words: holothurians; defense; toxicity; Cuverian tubules; Moorea, French Polynesia INTRODUCTION (Sakthivel et. Al, 1994). Approximately 20 species in two families and five genera, Sea cucumbers belong to the phylum including Holothuria, Bohadschia, and Thenelota, Echinodermata and the class Holothuroidea. -
Taxonomy of the Heavily Exploited Indo-Pacific Sandfish
Zoological Journal of the Linnean Society, 2009, 155, 40–59. With 10 figures Taxonomy of the heavily exploited Indo-Pacific sandfish complex (Echinodermata: Holothuriidae) CLAUDE MASSIN1*, SVEN UTHICKE2, STEVEN W. PURCELL3, FRANK W. E. ROWE, FLS4† and YVES SAMYN5 1Department of Invertebrates, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, 1000 Brussels, Belgium 2Australian Institute of Marine Science, PMB No 3, Townsville, Qld 4810, Australia 3The WorldFish Center, c/o SPC – Secretariat of the Pacific Community, B.P. D5, 98848 Noumea Cedex, New Caledonia 4Research Associate, Australian Museum, Sydney, NSW, 2000, Australia 5Global Taxonomy Initiative, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, 1000 Brussels, Belgium Received 5 September 2007; accepted for publication 18 October 2007 Two commercially valuable holothurians, the sandfish and golden sandfish, vary in colour and have a confused taxonomy, lending uncertainty to species identifications. A recent molecular study showed that the putative variety Holothuria (Metriatyla) scabra var. versicolor Conand, 1986 (‘golden sandfish’) is a distinct species from, but could hybridize with, H. (Metriatyla) scabra Jaeger, 1833 (’sandfish’). Examination of the skeletal elements and external morphology of these species corroborates these findings. The identity of H. (M.) scabra is unambiguously defined through the erection and description of a neotype, and several synonyms have been critically re-examined. The nomenclaturally rejected taxon H. (Metriatyla) timama Lesson, 1830 and H. (M.) scabra var. versicolor (a nomen nudum) are herein recognized as conspecific and are allocated to a new species, Holothuria lessoni sp. nov., for which type specimens are described. The holotype and only known specimen of H. aculeata Semper, 1867, has been found and is redescribed. -
FTP520 Seacucumber 09.Indd
7 1. Foreword The conservation and management of sea cucumbers are of paramount importance because these animals fulfil an important role in marine ecosystems and are a significant source of income to many coastal communities worldwide (Conand, 1990; Conand and Byrne, 1994). The current grave status (see Glossary) of sea cucumber stocks in numerous countries can be attributed to three broad causes: rampant exploitation, ever-increasing market demand and inadequacy of fishery management. The unique life history traits of holothurians (e.g. low or infrequent recruitment, great longevity and density-dependent reproductive success) also make these species especially vulnerable to overfishing. The vulnerability of sea cucumber populations to local extinction and the risk of long-term loss of fishery productivity have prompted several international and regional meetings of expert scientists and fishery managers in recent years. In 2003, FAO hosted a technical workshop, “Advances in sea cucumber aquaculture and management”, and published a report with technical papers and recommendations for fishery management (Lovatelli et al., 2004). The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) also ran a technical workshop, in 2004 in Malaysia, entitled “Conservation of sea cucumbers in the families Holothuridae and Stichopodidae”, providing scientific justification and urging for the immediate need of conservation and sustainable exploitation of sea cucumbers (Conand, 2004, 2006a, 2006b; Bruckner, 2006a). In 2006, the Australian Centre for International Agricultural Research (ACIAR) organized a workshop to produce a simple guidebook to help Pacific fishery managers to diagnose the health of their sea cucumber fisheries and develop appropriate management plans (Friedman et al., 2008a). -
Community Structure, Diversity, and Distribution Patterns of Sea Cucumber
Community structure, diversity, and distribution patterns of sea cucumber (Holothuroidea) in the coral reef area of Sapeken Islands, Sumenep Regency, Indonesia 1Abdulkadir Rahardjanto, 2Husamah, 2Samsun Hadi, 1Ainur Rofieq, 2Poncojari Wahyono 1 Biology Education, Postgraduate Directorate, Universitas Muhammadiyah Malang, Malang, East Java, Indonesia; 2 Biology Education, Faculty of Teacher Training and Education, Universitas Muhammadiyah Malang, Malang, Indonesia. Corresponding author: A. Rahardjanto, [email protected] Abstract. Sea cucumbers (Holothuroidea) are one of the high value marine products, with populations under very critical condition due to over exploitation. Data and information related to the condition of sea cucumber communities, especially in remote islands, like the Sapeken Islands, Sumenep Regency, East Java, Indonesia, is still very limited. This study aimed to determine the species, community structure (density, frequency, and important value index), species diversity index, and distribution patterns of sea cucumbers found in the reef area of Sapeken Islands, using a quantitative descriptive study. This research was conducted in low tide during the day using the quadratic transect method. Data was collected by making direct observations of the population under investigation. The results showed that sea cucumbers belonged to 11 species, from 2 orders: Aspidochirotida, with the species Holothuria hilla, Holothuria fuscopunctata, Holothuria impatiens, Holothuria leucospilota, Holothuria scabra, Stichopus horrens, Stichopus variegates, Actinopyga lecanora, and Actinopyga mauritiana and order Apodida, with the species Synapta maculata and Euapta godeffroyi. The density ranged from 0.162 to 1.37 ind m-2, and the relative density was between 0.035 and 0.292 ind m-2. The highest density was found for H. hilla and the lowest for S. -
Phylogeny of Labidodemas and the Holothuriidae (Holothuroidea: Aspidochirotida) As Inferred from Morphology
Blackwell Science, LtdOxford, UKZOJZoological Journal of the Linnean Society0024-4082The Lin- nean Society of London, 2005? 2005 144? 103120 Original Article PHYLOGENY OF THE HOLOTHURIIDAEY. SAMYN ET AL . Zoological Journal of the Linnean Society, 2005, 144, 103–120. With 6 figures Phylogeny of Labidodemas and the Holothuriidae (Holothuroidea: Aspidochirotida) as inferred from morphology YVES SAMYN1*, WARD APPELTANS1† and ALEXANDER M. KERR2‡ 1Unit for Ecology & Systematics, Free University Brussels (VUB), Pleinlaan 2, B-1050 Brussels, Belgium 2Department of Ecology and Evolutionary Biology, Osborn Zoölogical Laboratories, Yale University, New Haven CT 06520, USA Received July 2003; accepted for publication November 2004 The Holothuriidae is one of the three established families within the large holothuroid order Aspidochirotida. The approximately 185 recognized species of this family are commonly classified in five nominal genera: Actinopyga, Bohadschia, Holothuria, Pearsonothuria and Labidodemas. Maximum parsimony analyses on morphological char- acters, as inferred from type and nontype material of the five genera, revealed that Labidodemas comprises highly derived species that arose from within the genus Holothuria. The paraphyletic status of the latter, large (148 assumed valid species) and morphologically diverse genus has recently been recognized and is here confirmed and discussed. Nevertheless, we adopt a Darwinian or eclectic classification for Labidodemas, which we retain at generic level within the Holothuriidae. We compare our phylogeny -
Identifying Sea Cucumbers
Identifying Sea Cucumbers: Implementing and enforcing an Appendix II listing of teatfish INTRODUCTION Sea cucumbers, or bêche-de-mer (the dried product), are a luxury good classified as one of the eight culinary treasures of the sea. On the international market, sea cucumbers can be sold at prices ranging from USD $145-389 per kg, an increase of 16.6% from 2011–2016. While demand for sea cucumbers remains high, stocks of some wild populations have dropped significantly. Parties to the Convention on International Trade in Endangered Species of Wild Flora and Fau- na (CITES) have proposed the white teatfish Holothuria( fuscogilva), and the two black teatfishes (Holothuria nobilis and Holothuria whitmaei) for listing in Appendix II at the 18th CITES Conference of Parties (CoP18). With population declines from 50-90%, not only are these species in need of international trade management to ensure continued trade is sustainably sourced, but they are also easily identifiable from other sea cucumber species - meaning CITES Parties can easily and effectively implement this potential listing. Sea cucumbers are bottom dwelling species, residing along coral reefs and in association with seagrasses almost globally. Moving slowly across the ocean floor, sea cucumbers consume, among other things, fine organic matter and sand. Doing so ensures that nutrients are cycled back into the ecosystem, as well as the mixing of oxygen into the substrate - essential functions that pro- vide the backbone of healthy marine ecosystems. Out of 1,200 known sea cucumber species, only approximately 70 species are found in the international trade. Of those found in trade, H. -
Pearlfish Carapus Bermudensis from the Sea Cucumber Holothuria Mexicana in Belize (Central America)
SPC Beche-de-mer Information Bulletin #38 – March 2018 73 Pearlfish Carapus bermudensis from the sea cucumber Holothuria mexicana in Belize (Central America) Arlenie Rogers1,*, Jean-François Hamel2 and Annie Mercier3 Pearlfish (Carapidae) are specialised fishes that mainly live in the respiratory tree of sea cucumber hosts (Arnold 1956; Shen and Yeh 1987; Smith and Tyler 1969; Smith 1964) in a relationship that has generally been defined as commensalism (Parmentier et al. 2003; Van Den Spiegel and Jangoux 1989; Parmentier et al. 2016). However, some species such as Encheliophis spp. are known to feed off their host’s gonad (Murdy and Cowan 1980; Parmentier et al. 2003; Pamentier and Vandewalle 2005; Parmentier et al. 2016). The present article highlights the occurrence of and from the Range (16˚05.616’N: 88˚42.827’W) on the pearlfish Carapus bermudensis (Figure 1) inside 12 February 2012 at a depth of 7.6 m. The latter the sea cucumber Holothuria mexicana in Belize. two sites consisted of seagrass (Thalassia testudi- Adults of H. mexicana were collected from Buggle num), sand and coral rubble and were within the Caye (16˚28.377’ N: 88˚21.77’W) on 14 July 2015 at Port Honduras Marine Reserve, while the former a depth 1.2 m; at Frenchman Caye (16˚06.347’N: site consisted of patch coral, sand and T. testudi- 88˚33.702’W) on 9 June 2014 at a depth of 10.7 m; num (Figure 1). Figure 1. Locations where sea cucumbers (H. mexicana) hosting the pearlfish C. bermudensis were found. -
Reproductive Biology of the Sea Cucumber Holothuria Sanctori (Echinodermata: Holothuroidea)
SCIENTIA MARINA 76(4) December 2012, 741-752, Barcelona (Spain) ISSN: 0214-8358 doi: 10.3989/scimar.03543.15B Reproductive biology of the sea cucumber Holothuria sanctori (Echinodermata: Holothuroidea) PABLO G. NAVARRO 1,2, SARA GARCÍA-SANZ 2 and FERNANDO TUYA2 1 Instituto Canario de Ciencias Marinas, Ctra. Taliarte s/n, Telde, 35200, Las Palmas, Spain. E-mail: [email protected] 2 BIOGES, Universidad de Las Palmas de Gran Canaria, 35017, Las Palmas de G.C., Spain. SUMMARY: The reproductive biology of the sea cucumber Holothuria sanctori was studied over 24 months (February 2009 to January 2011) at Gran Canaria through the gonad index and a combination of macro- and microscopic analysis of the gonads. Holothuria sanctori showed a 1:1 sex ratio and a seasonal reproductive cycle with a summer spawning: the mean gonad index showed a maximum (3.99±0.02) in summer (June-July) and a minimum (0.05±0.04) between late autumn (November) and early spring (March). Females had significantly wider gonad tubules than males. First maturity occurred at a size of 201 to 210 mm, a gutted body weight of 101 to 110 g and a total weight of 176 to 200 g. Holothuria sanctori shows a typical temperate species reproduction pattern. These results could be useful for managing current extractions of H. sanctori in the Mediterranean and in case a specific fishery is started in the eastern Atlantic region. Keywords: Holothuria sanctori, sea cucumber, holothurians, reproduction, life-cycle, maturity, Canary Islands. RESUMEN: Biología reproductiva del pepino de mar HOLOTHURIA SANCTORI (Echinodermata: Holothuroidea). – Se estudió la biología reproductiva del pepino de mar Holothuria sanctori durante 24 meses (Febrero de 2009 a Enero de 2010) en la isla de Gran Canaria, mediante el índice gonadal y una combinación de análisis macro y microscópicos de sus gónadas.