DOCSLIB.ORG

Lectures 13&14 HW

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
Lectures 13&14 HW Lectures 13 & 14 Key, with contributions from Palleros CHEM 109 1.Build the nucleosides (sugar and base) & nucleotides (sugar, base, and 5’ phosphate). Nucleoside Nucleotide Nucleobase (DNA) - deoxyribose (RNA) - ribose NH2 NH2 NH 2 N N N N N N N N O N N HO N N -O P O H O O O- Adenine OH OH OH O O O N NH N NH N NH N N NH O N N NH HO 2 2 N N NH -O P O H 2 O O O- Guanine OH OH OH NH2 NH2 NH 2 N N N N O O N O N O HO -O P O H O O - Cytosine O OH OH OH O O NH NH N O N O HO H O Thymine OH X O O NH NH O N O N O - H O P O O Uracil - O X OH OH 1 Nucleic Acids Components 1 Daniel Palleros Additional Problems. Answers Nucleic Acids Components Answers to Additional Problems Lectures 13 & 14 Key, with contributions from Palleros CHEM 109 2. HeterocyclesProblem 1 in drugs (refer to table in Lecture 13 notes) a) Loratadine b) Rosuvastatin Cl pyridine OH pyrimidine OH O N N OH H C piperidine 3 N N N O S F CH3 O O O c) Atorvastatin d) Cimetidine N S NH OH O OH O N N H3C N OH N H HN N CH3 H pyrrole F imidazole e) Ciprofloxacin You may not recognize the quinoline ring system in the structure on the left, but it’s easier to see it in the resonance structure on the right. O O O O F OH F OH N N N N quinoline Nucleic NAcids Components Daniel Palleros H N 2 Additional Problems. Answers H piperazine piperazine f) Tioconazole N imidazole N Cl O S Cl Cl thiophene Problem 2 a) Pyrrole (pKa = 17.5) is more acidic than pyrrolidine (pKa ≈ 35) because the anion of pyrrole is more stable than the anion of pyrrolidine. The higher acidity of pyrrole is due to the sp2 hybridization of the N; sp2 hybridized atoms have more s-character, hold electrons tighter and, in general, are more electronegative and more tolerant of negative charges than sp3 hybridized atoms and, thus, yield more stable anions. 2 Pyrrole pKa = 17.5 + H2O + H O+ N N 3 H sp2 Pyrrolidine pKa ! 35 + H O 2 + H O+ N N 3 H 3 sp b) The conjugate acid of pyrrole (pKa = 0.4) is more acidic than the conjugate acid of pyrrolidine (pKa = 11.3) because pyrrole is an aromatic compound while its conjugate acid is not. Deprotonation of the conjugate acid of pyrrole restores the aromaticity to the pyrrole ring with a significant increase in stability. Such gain in stability does not occur in the deprotonation of pyrrolidine, an aliphatic amine. conjugate acid of pyrrole: + H O + H3O N 2 N H H H pKa = 0.4 aromatic Nucleic Acids Components 2 Daniel Palleros Additional Problems. Answers f) Tioconazole N imidazole N Cl O S Cl Cl Lecturesthiophen e13 & 14 Key , with contributions from Palleros CHEM 109 3.P rBasicityoblem 2 in heterocycles… a) Pyrrole (pKa = 17.5) is more acidic than pyrrolidine (pKa ≈ 35) because the anion of pyrrole is more stable than the anion of pyrrolidine. The higher acidity of pyrrole is due to the sp2 hybridization of the N; sp2 hybridized atoms have more s-character, hold electrons tighter and, in general, are more electronegative and more tolerant of negative charges than sp3 hybridized atoms and, thus, yield more stable anions. Pyrrole pKa = 17.5 + H2O + H O+ N N 3 H sp2 Pyrrolidine pKa ! 35 + H O 2 + H O+ N N 3 H 3 sp b) The conjugate acid of pyrrole (pKa = 0.4) is more acidic than the conjugate acid of pyrrolidine (pKa = 11.3) because pyrrole is an aromatic compound while its conjugate acid is not. Deprotonation of the conjugate acid of pyrrole restores the aromaticity to the pyrrole ring with a significant increase in stability. Such gain in stability does not occur in the deprotonation of pyrrolidine, an aliphatic amine. conjugate acid of pyrrole: + H O + H3O N 2 N Nucleic Acids Components H H 3 H Daniel Palleros Additional Problems. Answers pK = 0.4 aromatic a conjugate acid of pyrrolidine: + H O N + H2O N 3 H H H pK = 11.3 aliphatic a c) Pyrimidine (pKa conj. acid = 1.3; pKb = 12.7) is less basic than pyridine (pKa conj. acid = 5.25; pKb = 8.75) because the second N atom in pyrimidine is electron- withdrawing and destabilizes the positively charged conjugate acid. It can also be explained by saying that the electron-withdrawing effect of the second N makes the electron pair less prone to protonation. pyrimidine: N N + H2O + H3O N N H pKb = 12.7 pyridine: + H2O + H3O N N H pKb = 8.75 N less stable than N N H H d) Pyridine is less basic than piperidine because in pyridine the lone electron pair is on an sp2 hybridized orbital which, having more s-character, is more electronegative and more difficult to get protonated than the electron pair in piperidine which is located on an sp3 orbital. 3 pyridine piperidine N N 3 sp2 H sp pKb = 8.75 pKb = 2.8 e) N7 in purine is less basic than N3 in imidazole because the pyrimidine ring, present in purine but not in imidazole, due to its two electron-withdrawing N atoms takes electron density away from the adjacent ring, making it less prone to protonation. Nucleic Acids Components 3 Daniel Palleros Additional Problems. Answers conjugate acid of pyrrolidine: + H O N + H2O N 3 H H H pK = 11.3 aliphatic a c) Pyrimidine (pKa conj. acid = 1.3; pKb = 12.7) is less basic than pyridine (pKa conj. acid = 5.25; pKb = 8.75) because the second N atom in pyrimidine is electron- withdrawing and destabilizes the positively charged conjugate acid. It can also be explained by saying that the electron-withdrawing effect of the second N makes the electron pair less prone to protonation. pyrimidine: N N + H2O + H3O N N H pKb = 12.7 pyridine: + H2O + H3O N N H pKb = 8.75 N less stable than Lectures 13 & 14 Key, with contributionsN from PallerosN CHEM 109 H H 3 con’td… d) Pyridine is less basic than piperidine because in pyridine the lone electron pair is on an sp2 hybridized orbital which, having more s-character, is more electronegative and more difficult to get protonated than the electron pair in piperidine which is located on an sp3 orbital. pyridine piperidine N N 3 sp2 H sp pKb = 8.75 pKb = 2.8 e) N7 in purine is less basic than N3 in imidazole because the pyrimidine ring, present in purine but not in imidazole, due to its two electron-withdrawing N atoms takes electron Nucleic Acids Components 4 Daniel Palleros deAnsddiititoyn aal wPraoybl efmroms. An stwheer sa djacent ring, making it less prone to protonation. Purine Imidazole less basic than imidazole 3 7 N 4 N N 1 5 2 N N 9 N 1 H 3 H take electron density away from adjacent ring f) The H on purine’s N9 is more acidic (pKa = 8.9) than the H on imidazole’s N1 (pKa = 14.2), because the conjugate base of purine (anion on N9) is more stabilized than the conjugate base of imidazole (anion on N1) due to the presence of the electron- withdrawing pyrimidine ring. Purine anion Imidazole anion 7 N 3 4 N 1 N 5 2 9 N N N 3 1 take electron density away from adjacent ring g) Both heterocycles have two N atoms. In pyrimidine, a π-deficient ring, both N atoms with their electron pairs outside the ring, are electron withdrawing and they mutually decrease their electron densities, making themselves less basic. In imidazole, on the other hand, N1 with an electron pair inside the ring, donates electron density and increases the electron density on the other nitrogen, N3, making it more basic. pKa conj. acid = 6.95; pKb = 7.05 3 4 N N 2 5 N 1 N H pK conj. acid = 1.3 electron donor a pKb = 12.7 both N are e-withdrawing Imidazole Pyrimidine Problem 3 1,4-Dihydro-1,4-diazine (also known as 1,4-dihydropyrazine) has 8 π electrons (which is 4 not a Hückel number; Hückel numbers are (4n + 2), where n = 0, 1, 2, 3, etc.). The molecule is antiaromatic and has not been isolated (although some derivatives of it have). Nucleic Acids Components 5 Daniel Palleros Additional Problems. Answers Nucleic Acids Components 8 Daniel Palleros H Additional Problems. Answers N 8 ! electrons electrons and, thus, are aromatic but these structures involve charge separation between N atoms of identical electroneH gativity (two N), which has a high energy cost and, therefore, Nucleic Acids Components Daniel Palleros 1,4-dihydro-1,4-diazine 7 do not Lectures c Aont d d i t ri oi nbut a l 13 P e r o mb &le uc14ms.h AKey ntsow ,et rhewiths st contributionsability of the from mol Pallerosecule. E xperimentally it was CHEMfound t109hat only tautomers I and II occur in measurable amounts in water (both in similar amounts). P roblem4.doubl Risperidone4 e charge separation which is energetically unfavorable, and thus their contribution to the stabilityII Iof the molecule is small. less basic: sp2 hybridized N O O O O N H N H N N H H NH NH N N N N N N NO nonbasic: amN ide O N O N O N O H H H IV H O N N N F N N N N N N N O H COH3 O N H H H Problem 10 H N most basic: alipNhatic amine N 3 NH2 (sp hybridized N) O 2 N O less basic: sp hybridized N N O N O H N NH deamination H N NH ProblemLECTURE 5 14 HW KEYaro matic aromatic N In the fol1low.
Load more

Recommended publications
  • Precursors and Chemicals Frequently Used in the Illicit Manufacture of Narcotic Drugs and Psychotropic Substances 2017
    INTERNATIONAL NARCOTICS CONTROL BOARD Precursors and chemicals frequently used in the illicit manufacture of narcotic drugs and psychotropic substances 2017 EMBARGO Observe release date: Not to be published or broadcast before Thursday, 1 March 2018, at 1100 hours (CET) UNITED NATIONS CAUTION Reports published by the International Narcotics Control Board in 2017 The Report of the International Narcotics Control Board for 2017 (E/INCB/2017/1) is supplemented by the following reports: Narcotic Drugs: Estimated World Requirements for 2018—Statistics for 2016 (E/INCB/2017/2) Psychotropic Substances: Statistics for 2016—Assessments of Annual Medical and Scientific Requirements for Substances in Schedules II, III and IV of the Convention on Psychotropic Substances of 1971 (E/INCB/2017/3) Precursors and Chemicals Frequently Used in the Illicit Manufacture of Narcotic Drugs and Psychotropic Substances: Report of the International Narcotics Control Board for 2017 on the Implementation of Article 12 of the United Nations Convention against Illicit Traffic in Narcotic Drugs and Psychotropic Substances of 1988 (E/INCB/2017/4) The updated lists of substances under international control, comprising narcotic drugs, psychotropic substances and substances frequently used in the illicit manufacture of narcotic drugs and psychotropic substances, are contained in the latest editions of the annexes to the statistical forms (“Yellow List”, “Green List” and “Red List”), which are also issued by the Board. Contacting the International Narcotics Control Board The secretariat of the Board may be reached at the following address: Vienna International Centre Room E-1339 P.O. Box 500 1400 Vienna Austria In addition, the following may be used to contact the secretariat: Telephone: (+43-1) 26060 Fax: (+43-1) 26060-5867 or 26060-5868 Email: [email protected] The text of the present report is also available on the website of the Board (www.incb.org).
    [Show full text]
  • End-Of-Line Hyphenation of Chemical Names (IUPAC Provisional
    Pure Appl. Chem. 2020; aop IUPAC Recommendations Albert J. Dijkstra*, Karl-Heinz Hellwich, Richard M. Hartshorn, Jan Reedijk and Erik Szabó End-of-line hyphenation of chemical names (IUPAC Provisional Recommendations) https://doi.org/10.1515/pac-2019-1005 Received October 16, 2019; accepted January 21, 2020 Abstract: Chemical names and in particular systematic chemical names can be so long that, when a manu- script is printed, they have to be hyphenated/divided at the end of a line. Many systematic names already contain hyphens, but sometimes not in a suitable division position. In some cases, using these hyphens as end-of-line divisions can lead to illogical divisions in print, as can also happen when hyphens are added arbi- trarily without considering the ‘chemical’ context. The present document provides recommendations and guidelines for authors of chemical manuscripts, their publishers and editors, on where to divide chemical names at the end of a line and instructions on how to avoid these names being divided at illogical places as often suggested by desk dictionaries. Instead, readability and chemical sense should prevail when authors insert optional hyphens. Accordingly, the software used to convert electronic manuscripts to print can now be programmed to avoid illogical end-of-line hyphenation and thereby save the author much time and annoy- ance when proofreading. The recommendations also allow readers of the printed article to determine which end-of-line hyphens are an integral part of the name and should not be deleted when ‘undividing’ the name. These recommendations may also prove useful in languages other than English.
    [Show full text]
  • Analysis of Ammonia and Volatile Organic Amine Emissions in a Confined Poultry Facility
    Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 5-2010 Analysis of Ammonia and Volatile Organic Amine Emissions in a Confined Poultry Facility Hanh Hong Thi Dinh Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Analytical Chemistry Commons Recommended Citation Dinh, Hanh Hong Thi, "Analysis of Ammonia and Volatile Organic Amine Emissions in a Confined Poultry Facility" (2010). All Graduate Theses and Dissertations. 598. https://digitalcommons.usu.edu/etd/598 This Thesis is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. Copyright © Hanh Hong Thi Dinh 2010 All Right Reserved iii ABSTRACT Analysis of Ammonia and Volatile Organic Amine Emissions in a Confined Poultry Facility by Hanh Hong Thi Dinh, Master of Science Utah State University, 2010 Major Professor: Dr Robert S. Brown Department: Chemistry and Biochemistry The National Air Emission Monitoring Study (NAEMS) project was funded by the Agricultural Air Research Council (AARC) to evaluate agricultural emissions nationwide. Utah State University (USU) is conducting a parallel study on agricultural emissions at a Cache Valley poultry facility. As part of this parallel study, samples of animal feed, eggs and animal waste were collected weekly from three manure barns (designated: manure barn, barn 4 - manure belt and barn 5 - high rise) from May 2008 to November 2009. These samples were analyzed to determine ammonia content, total Kjeldahl nitrogen content and ammonia emission.
    [Show full text]
  • Efficient Synthesis of a Chiral 2-Aryl Pyrrolidine
    PROCESS DEVELOPMENT Peer reviewed Jared Piper Efficient synthesis of a chiral 2-aryl Pyrrolidine JARED L. PIPER1,*, STANLEY P. KOLIS1, CHAOYU XIE1, MARTIAL BERTRAND2, PASCAL BOQUEL2 *Corresponding author 1. Eli Lilly and Company, Lilly Corporate Centre, Chemical Product Research and Development, Indianapolis, IN 46285, USA 2. Eli Lilly & Company, Lilly Development Centre, Chemical Product Research and Development, S.A., Rue Granbonpré 11, Mont-Saint-Guibert, B-1348, Belgium KEYWORDS Asymmetric synthesis; pyrrolidine; iridium catalysts. ABSTRACT 2-aryl pyrrolidine 1 was efficiently prepared in three steps starting from N-vinylpyrrolidinone and ethyl 3,5-dimethylbenzoate. The key steps highlight the use of a rearrangement and an iridium catalysed hydrogenation to afford the desired compound. This methodology was utilised to prepare several differentially 2-aryl-substituted pyrrolidines in good yield and enantiomeric excess, and is complimentary to existing methods to prepare molecules of this type. 38 Scheme 1. First generation synthesis of 1. INTRODUCTION hemical compounds enantioselective reduction, the synthesis had potential limitations. containing the pyrrolidine The Grignard chemistry required long reaction times (>24 hours), Cstructural motif are was difficult to initiate, and failed to reach complete conversion on ubiquitous in nature, and are present larger scale. In addition, multiple impurities were observed for the in both the core of the amino acids reaction, and the rejection of these substances from the product proline and hydroxyproline, and the stream was not trivial. During the cyclization event to form 6, the natural alkaloids nicotine and ficine. retention of stereochemical integrity of 5 during the course of the These heterocycles have been used reaction was unpredictable.
    [Show full text]
  • Heterocycles 2 Daniel Palleros
    Heterocycles 2 Daniel Palleros Heterocycles 1. Structures 2. Aromaticity and Basicity 2.1 Pyrrole 2.2 Imidazole 2.3 Pyridine 2.4 Pyrimidine 2.5 Purine 3. Π-excessive and Π-deficient Heterocycles 4. Electrophilic Aromatic Substitution 5. Oxidation-Reduction 6. DNA and RNA Bases 7. Tautomers 8. H-bond Formation 9. Absorption of UV Radiation 10. Reactions and Mutations Heterocycles 3 Daniel Palleros Heterocycles Heterocycles are cyclic compounds in which one or more atoms of the ring are heteroatoms: O, N, S, P, etc. They are present in many biologically important molecules such as amino acids, nucleic acids and hormones. They are also indispensable components of pharmaceuticals and therapeutic drugs. Caffeine, sildenafil (the active ingredient in Viagra), acyclovir (an antiviral agent), clopidogrel (an antiplatelet agent) and nicotine, they all have heterocyclic systems. O CH3 N HN O O N O CH 3 N H3C N N HN N OH O S O H N N N 2 N O N N O CH3 N CH3 caffeine sildenafil acyclovir Cl S N CH3 N N H COOCH3 nicotine (S)-clopidogrel Here we will discuss the chemistry of this important group of compounds beginning with the simplest rings and continuing to more complex systems such as those present in nucleic acids. Heterocycles 4 Daniel Palleros 1. Structures Some of the most important heterocycles are shown below. Note that they have five or six-membered rings such as pyrrole and pyridine or polycyclic ring systems such as quinoline and purine. Imidazole, pyrimidine and purine play a very important role in the chemistry of nucleic acids and are highlighted.
    [Show full text]
  • APPENDIX G Acid Dissociation Constants
    harxxxxx_App-G.qxd 3/8/10 1:34 PM Page AP11 APPENDIX G Acid Dissociation Constants §␮ ϭ 0.1 M 0 ؍ (Ionic strength (␮ † ‡ † Name Structure* pKa Ka pKa ϫ Ϫ5 Acetic acid CH3CO2H 4.756 1.75 10 4.56 (ethanoic acid) N ϩ H3 ϫ Ϫ3 Alanine CHCH3 2.344 (CO2H) 4.53 10 2.33 ϫ Ϫ10 9.868 (NH3) 1.36 10 9.71 CO2H ϩ Ϫ5 Aminobenzene NH3 4.601 2.51 ϫ 10 4.64 (aniline) ϪO SNϩ Ϫ4 4-Aminobenzenesulfonic acid 3 H3 3.232 5.86 ϫ 10 3.01 (sulfanilic acid) ϩ NH3 ϫ Ϫ3 2-Aminobenzoic acid 2.08 (CO2H) 8.3 10 2.01 ϫ Ϫ5 (anthranilic acid) 4.96 (NH3) 1.10 10 4.78 CO2H ϩ 2-Aminoethanethiol HSCH2CH2NH3 —— 8.21 (SH) (2-mercaptoethylamine) —— 10.73 (NH3) ϩ ϫ Ϫ10 2-Aminoethanol HOCH2CH2NH3 9.498 3.18 10 9.52 (ethanolamine) O H ϫ Ϫ5 4.70 (NH3) (20°) 2.0 10 4.74 2-Aminophenol Ϫ 9.97 (OH) (20°) 1.05 ϫ 10 10 9.87 ϩ NH3 ϩ ϫ Ϫ10 Ammonia NH4 9.245 5.69 10 9.26 N ϩ H3 N ϩ H2 ϫ Ϫ2 1.823 (CO2H) 1.50 10 2.03 CHCH CH CH NHC ϫ Ϫ9 Arginine 2 2 2 8.991 (NH3) 1.02 10 9.00 NH —— (NH2) —— (12.1) CO2H 2 O Ϫ 2.24 5.8 ϫ 10 3 2.15 Ϫ Arsenic acid HO As OH 6.96 1.10 ϫ 10 7 6.65 Ϫ (hydrogen arsenate) (11.50) 3.2 ϫ 10 12 (11.18) OH ϫ Ϫ10 Arsenious acid As(OH)3 9.29 5.1 10 9.14 (hydrogen arsenite) N ϩ O H3 Asparagine CHCH2CNH2 —— —— 2.16 (CO2H) —— —— 8.73 (NH3) CO2H *Each acid is written in its protonated form.
    [Show full text]
  • Dissociation Constants of Organic Acids and Bases
    DISSOCIATION CONSTANTS OF ORGANIC ACIDS AND BASES This table lists the dissociation (ionization) constants of over pKa + pKb = pKwater = 14.00 (at 25°C) 1070 organic acids, bases, and amphoteric compounds. All data apply to dilute aqueous solutions and are presented as values of Compounds are listed by molecular formula in Hill order. pKa, which is defined as the negative of the logarithm of the equi- librium constant K for the reaction a References HA H+ + A- 1. Perrin, D. D., Dissociation Constants of Organic Bases in Aqueous i.e., Solution, Butterworths, London, 1965; Supplement, 1972. 2. Serjeant, E. P., and Dempsey, B., Ionization Constants of Organic Acids + - Ka = [H ][A ]/[HA] in Aqueous Solution, Pergamon, Oxford, 1979. 3. Albert, A., “Ionization Constants of Heterocyclic Substances”, in where [H+], etc. represent the concentrations of the respective Katritzky, A. R., Ed., Physical Methods in Heterocyclic Chemistry, - species in mol/L. It follows that pKa = pH + log[HA] – log[A ], so Academic Press, New York, 1963. 4. Sober, H.A., Ed., CRC Handbook of Biochemistry, CRC Press, Boca that a solution with 50% dissociation has pH equal to the pKa of the acid. Raton, FL, 1968. 5. Perrin, D. D., Dempsey, B., and Serjeant, E. P., pK Prediction for Data for bases are presented as pK values for the conjugate acid, a a Organic Acids and Bases, Chapman and Hall, London, 1981. i.e., for the reaction 6. Albert, A., and Serjeant, E. P., The Determination of Ionization + + Constants, Third Edition, Chapman and Hall, London, 1984. BH H + B 7. Budavari, S., Ed., The Merck Index, Twelth Edition, Merck & Co., Whitehouse Station, NJ, 1996.
    [Show full text]
  • Amine-Catalyzed Direct Self Diels–Alder Reactions of A,B-Unsaturated Ketones in Water: Synthesis of Pro-Chiral Cyclohexanones
    TETRAHEDRON LETTERS Pergamon Tetrahedron Letters 43 (2002) 6743–6746 Amine-catalyzed direct self Diels–Alder reactions of a,b-unsaturated ketones in water: synthesis of pro-chiral cyclohexanones D. B. Ramachary, Naidu S. Chowdari and Carlos F. Barbas, III* The Skaggs Institute for Chemical Biology and the Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA Received 27 June 2002; revised 18 July 2002; accepted 22 July 2002 Abstract—Amine-catalyzed direct self Diels–Alder reactions of a,b-unsaturated ketones have been developed. (S)-1-(2-Pyrro- lidinyl-methyl)pyrrolidine, L-proline and pyrrolidine catalyzed the reaction of a,b-unsaturated ketones to provide cyclohexanone derivatives with good yield (up to 80%) in a single step via in situ-generation of 2-amino-1,3-butadienes and iminium ion-activated enones. Pro-chiral cyclohexanones were selectively prepared with pyrrolidine catalysis in water. © 2002 Published by Elsevier Science Ltd. The Diels–Alder reaction is one of the most important an attractive single-step route to cyclohexanone transformations in synthetic chemistry for the construc- derivatives.8 tion of six-membered ring systems and many strategies to catalyze this reaction have been studied.1 Recently, Initially, we studied a variety of reaction conditions organoamines have been applied as catalysts of Diels– involving amine catalysts for the self Diels–Alder reac- Alder reactions involving a,b-unsaturated carbonyl tion of a,b-unsaturated ketone. Since chiral
    [Show full text]
  • Essentials of Heterocyclic Chemistry-I Heterocyclic Chemistry
    Baran, Richter Essentials of Heterocyclic Chemistry-I Heterocyclic Chemistry 5 4 Deprotonation of N–H, Deprotonation of C–H, Deprotonation of Conjugate Acid 3 4 3 4 5 4 3 5 6 6 3 3 4 6 2 2 N 4 4 3 4 3 4 3 3 5 5 2 3 5 4 N HN 5 2 N N 7 2 7 N N 5 2 5 2 7 2 2 1 1 N NH H H 8 1 8 N 6 4 N 5 1 2 6 3 4 N 1 6 3 1 8 N 2-Pyrazoline Pyrazolidine H N 9 1 1 5 N 1 Quinazoline N 7 7 H Cinnoline 1 Pyrrolidine H 2 5 2 5 4 5 4 4 Isoindole 3H-Indole 6 Pyrazole N 3 4 Pyrimidine N pK : 11.3,44 Carbazole N 1 6 6 3 N 3 5 1 a N N 3 5 H 4 7 H pKa: 19.8, 35.9 N N pKa: 1.3 pKa: 19.9 8 3 Pyrrole 1 5 7 2 7 N 2 3 4 3 4 3 4 7 Indole 2 N 6 2 6 2 N N pK : 23.0, 39.5 2 8 1 8 1 N N a 6 pKa: 21.0, 38.1 1 1 2 5 2 5 2 5 6 N N 1 4 Pteridine 4 4 7 Phthalazine 1,2,4-Triazine 1,3,5-Triazine N 1 N 1 N 1 5 3 H N H H 3 5 pK : <0 pK : <0 3 5 Indoline H a a 3-Pyrroline 2H-Pyrrole 2-Pyrroline Indolizine 4 5 4 4 pKa: 4.9 2 6 N N 4 5 6 3 N 6 N 3 5 6 3 N 5 2 N 1 3 7 2 1 4 4 3 4 3 4 3 4 3 3 N 4 4 2 6 5 5 5 Pyrazine 7 2 6 Pyridazine 2 3 5 3 5 N 2 8 N 1 2 2 1 8 N 2 5 O 2 5 pKa: 0.6 H 1 1 N10 9 7 H pKa: 2.3 O 6 6 2 6 2 6 6 S Piperazine 1 O 1 O S 1 1 Quinoxaline 1H-Indazole 7 7 1 1 O1 7 Phenazine Furan Thiophene Benzofuran Isobenzofuran 2H-Pyran 4H-Pyran Benzo[b]thiophene Effects of Substitution on Pyridine Basicity: pKa: 35.6 pKa: 33.0 pKa: 33.2 pKa: 32.4 t 4 Me Bu NH2 NHAc OMe SMe Cl Ph vinyl CN NO2 CH(OH)2 4 8 5 4 9 1 3 2-position 6.0 5.8 6.9 4.1 3.3 3.6 0.7 4.5 4.8 –0.3 –2.6 3.8 6 3 3 5 7 4 8 2 3 5 2 3-position 5.7 5.9 6.1 4.5 4.9 4.4 2.8 4.8 4.8 1.4 0.6 3.8 4 2 6 7 7 3 N2 N 1 4-position
    [Show full text]
  • Human Health Risk Assessment for Aluminium, Aluminium Oxide, and Aluminium Hydroxide
    University of Kentucky UKnowledge Pharmaceutical Sciences Faculty Publications Pharmaceutical Sciences 2007 Human Health Risk Assessment for Aluminium, Aluminium Oxide, and Aluminium Hydroxide Daniel Krewski University of Ottawa, Canada Robert A. Yokel University of Kentucky, [email protected] Evert Nieboer McMaster University, Canada David Borchelt University of Florida See next page for additional authors Right click to open a feedback form in a new tab to let us know how this document benefits ou.y Follow this and additional works at: https://uknowledge.uky.edu/ps_facpub Part of the Pharmacy and Pharmaceutical Sciences Commons Authors Daniel Krewski, Robert A. Yokel, Evert Nieboer, David Borchelt, Joshua Cohen, Jean Harry, Sam Kacew, Joan Lindsay, Amal M. Mahfouz, and Virginie Rondeau Human Health Risk Assessment for Aluminium, Aluminium Oxide, and Aluminium Hydroxide Notes/Citation Information Published in the Journal of Toxicology and Environmental Health, Part B: Critical Reviews, v. 10, supplement 1, p. 1-269. This is an Accepted Manuscript of an article published by Taylor & Francis in Journal of Toxicology and Environmental Health, Part B: Critical Reviews on April 7, 2011, available online: http://www.tandfonline.com/10.1080/10937400701597766. Copyright © Taylor & Francis Group, LLC The copyright holders have granted the permission for posting the article here. Digital Object Identifier (DOI) http://dx.doi.org/10.1080/10937400701597766 This article is available at UKnowledge: https://uknowledge.uky.edu/ps_facpub/57 This is an Accepted Manuscript of an article published by Taylor & Francis in Journal of Toxicology and Environmental Health, Part B: Critical Reviews on April 7, 2011, available online: http://www.tandfonline.com/10.1080/10937 400701597766.
    [Show full text]
  • Synthesis, Structure, and Reactivity of Early Transition Metal
    SYNTHESIS, STRUCTURE, AND REACTIVITY OF EARLY TRANSITION METAL PRECATALYSTS BEARING (N,O)-CHELATING LIGANDS by Philippa Robyn Payne B.Sc., University of Ottawa, 2008 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE AND POSTDOCTORAL STUDIES (Chemistry) THE UNIVERSITY OF BRITISH COLUMBIA (Vancouver) December 2013 © Philippa Robyn Payne, 2013 ABSTRACT The synthesis, structure, and reactivity of early transition metal complexes containing (N,O)-chelating ancillary ligands are described. The ligands investigated include ureates, pyridonates, amidates, and sulfonamidates. These related ligands generate four-membered metallacycles when bound to the metal center in a κ2-(N,O) fashion. The zirconium and tantalum complexes have been examined in terms of their activity and selectivity as precatalyst systems for hydroamination or hydroaminoalkylation. A chiral cyclic ureate ligand has been synthesized from enantiopure L-valine for application in zirconium-catalyzed asymmetric hydroamination of aminoalkenes. Chiral zirconium complexes, prepared in situ from two equivalents of the urea proligand and tetrakis(dimethylamido) zirconium, promote the formation of pyrrolidines and piperidines in up to 12% ee. Isolation of an asymmetric bimetallic zirconium complex containing three bridging ureate ligands confirms that ligand redistribution occurs in solution and is most likely responsible for the low enantioselectivities. Mechanistic investigations focusing on the hydroaminoalkylation reactivity promoted by a bis(pyridonate) bis(dimethylamido) zirconium precatalyst expose a complex catalytic system in solution. Stoichiometric investigations reveal the formation of polymetallic complexes upon addition of primary amines. The kinetic and stoichiometric investigations are most consistent with a bimetallic catalytically active species. A series of mono(amidate) tantalum amido complexes with varying steric and electronic properties have been synthesized via protonolysis.
    [Show full text]
  • Hazardous Waste Management Guidebook
    Hazardous Waste Management Guidebook FOR UNIVERSTIY AT BUFFALO CAMPUS LABORATORIES Prepared By Environment, Health & Safety Services 220 Winspear Avenue Buffalo, NY 14215 Phone: 716-829-3301 Web: www.ehs.buffalo.edu UB EH&S Hazardous Waste Management Guidebook Table of Contents 1.0 PURPOSE ........................................................................................... 3 2.0 SCOPE ............................................................................................... 4 3.0 DEFINITIONS ...................................................................................... 4 4.0 RESPONSIBILITIES ............................................................................... 5 4.1 EH&S ................................................................................................... 5 4.2 Faculty, Staff, and Students ............................................................. 5 5.0 PROCEDURES ....................................................................................... 6 5.1 Hazardous Waste Determination ................................................... 6 5.1.1 Characteristic Hazardous Wastes .......................................... 7 5.1.2 Listed Hazardous Wastes ........................................................ 9 5.2 Satellite Accumulation of Hazardous Waste ............................ 9 5.2.1 Accumulation Areas ............................................................. 10 5.2.2 Requirements for Hazardous Waste Containers ................ 10 5.2.3 Segregation of Hazardous Wastes .....................................
    [Show full text]