Author Manuscript Published OnlineFirst on March 9, 2017; DOI: 10.1158/0008-5472.CAN-16-2339 Author manuscripts have been peer reviewed and accepted for publication but have not yet been edited.
Title Page
Title: Pancreatic cancer progression relies upon mutant p53-induced
oncogenic signaling mediated by NOP14
Yongxing Du1,§, Ziwen Liu1, §, Lei You1, Pengjiao Hou2, Xiaoxia Ren1, Tao Jiao2, Wenjing
Zhao1, Zongze Li1, Hong Shu1, Changzheng Liu2,*, Yupei Zhao1,*
1 Department of General Surgery, Peking Union Medical College Hospital,
Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing
100730, PR China
2 Department of Biochemistry and Molecular Biology, State Key Laboratory of
Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese
Academy of Medical Sciences,School of Basic Medicine, Peking Union
Medical College, Beijing 100005, PR China
§ Authors share co-first authorship.
* To whom correspondence should be addressed: Yupei Zhao, E-mail:
[email protected], Fax: 86-10-65124875; Changzheng Liu, E-mail:
[email protected], Fax: 86-10-65253005.
Running Title: NOP14 primes mutp53-driven cancer progression
Key words: Pancreatic ductal adenocarcinoma, Mutant p53, NOP14, Cancer
metastasis
Abbreviations:
Mutp53, Mutant p53; PDAC, Pancreatic ductal adenocarcinoma; NOP14,
NOP14 nucleolar protein; rRNA, ribosomal RNA; PDGFRb, Platelet-derived
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growth factor receptor b; MAPK3, Mitogen-activated protein kinase 3; CDK2,
Cyclin dependent kinase 2; MMP9, Matrix metallopeptidase 9; RhoA, Ras
homolog family member A; p53, Tumor protein p53; P21, Cyclin dependent
kinase inhibitor 1A; H&E, hematoxylin-eosin; ATCC, the American Type
Culture Collection; DMEM, Dulbecco’s modified Eagle medium; cDNA,
complementary DNA; messenger RNA; siRNA, small interfering RNA; UTR,
untranslated region; qRT-PCR, quantitative reverse-transcription polymerase
chain reaction; Scr, scramble; miRNA, microRNA; MYO10, myosin X; SLUG,
Snail family transcriptional repressor 2; TGFB1, Transforming growth factor
beta 1; ZEB1, zinc finger E-box binding homeobox 1; EGFR, Epidermal growth
factor receptor; ITGB1, Integrin subunit beta 1; SMAD2, SMAD family member
2; TWIST1, Twist family bHLH transcription factor 1; ZNF652, Zinc finger
protein 652; CCNG2, Cyclin G2; SHARP1, Basic helix-loop-helix family
member e41; TP63, Tumor protein p63; PERP, PERP TP53 apoptosis effector ;
DAB2IP, DAB2 interacting protein; S100A4, S100 calcium binding protein A4;
PIM1, Pim-1 proto-oncogene, serine/threonine kinase; E2F1, E2F transcription
factor 1; TP53I3, Tumor protein p53 inducible protein 3; c-Myc, v-myc avian
myelocytomatosis viral oncogene homolog; BCL2, BCL2 apoptosis regulator;
NIH, National Institutes of Health; PBS, Phosphate Buffered Saline; SCID mice,
Severe combined immunodeficient mice; HRP, Horseradish peroxidase; ActD,
Actinomycin D; si-Con, si-control; RNA-seq, whole transcriptome sequencing;
miRNA-seq, microRNA sequencing; pri-miRNA, primary microRNA;
2
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pre-miRNA, microRNA precursor; IHC, Immunohistochemistry; OS, overall
survival.
Financial Support: This research was supported by the National Nature
Science Foundation of China (2013, 81272767, to Z. W. Liu; 2015, 81572459,
to Z. W. Liu; 2015, 81570780, to C. Z. Liu; and 2016, 81672443 to Y. P. Zhao).
Corresponding authors: Yupei Zhao, Department of General Surgery,
Peking Union Medical College Hospital, Chinese Academy of Medical
Sciences, Peking Union Medical College, Beijing 100730, PR China. Phone:
86-10-69156007, Fax: 86-10-65124875, E-mail: [email protected].
Changzheng Liu, Department of Biochemistry and Molecular Biology, State
Key Laboratory of Medical Molecular Biology, Institute of Basic Medical
Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine,
Peking Union Medical College, Beijing 100005, PR China. Phone:
86-10-69156424, Fax: 86-10-65253005, E-mail: [email protected]
Disclosure of Potential Conflicts of Interest:
No potential conflicts of interest were disclosed by the authors.
Word count for the abstract: 190
Word count for the text: 5000
Total Figures: 7
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ABSTRACT
Mutant p53 (mutp53) proteins promote tumor invasion and metastasis in
pancreatic ductal adenocarcinoma (PDAC). However, the mechanism
underlying sustained activation of mutp53 oncogenic signaling is currently
unclear. In this study, we report that NOP14 nucleolar protein (NOP14)
expression is upregulated in PDAC tumors and metastatic tissue specimens.
NOP14 overexpression promoted cell motility, whereas NOP14 inhibition
decreased invasive capacity of PDAC cells. In vivo invasion assays conducted
on established subcutaneously, orthotopically, and intravenously injected
tumor mouse models also indicated NOP14 as a promoter of PDAC
metastasis. Mechanistically, mutp53 was validated as a functional target of
NOP14; NOP14 primed tumor invasion and metastasis by increasing the
stability of mutp53 mRNA. The NOP14/mutp53 axis suppressed p21
expression at both the transcriptional and post-transcriptional levels via
induction of microRNA-17-5p in PDAC cells. In vivo, high NOP14 expression in
PDAC patient tumors correlated with local metastasis and lymph invasion.
Overall, our findings define a novel mechanism for understanding the function
of NOP14 in the metastatic cascade of PDAC. Targeting NOP14 allows for
effective suppression of tumor invasion in a mutp53-dependent manner,
implicating NOP14 inhibition as a potential approach for attenuating
metastasis in p53 mutant tumors.
4
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INTRODUCTION
The concept that gain-of-function of mutant p53 (mutp53) proteins led to
cancer progression was established over two decades ago, and a number of
hotspots have been identified in diverse cancers, including pancreatic ductal
adenocarcinoma (PDAC).(1) In human PDAC, p53 accumulation has been
correlated with lymph node metastasis, and knock-in Trp53 mutations result in
the acquisition of critical functions for overcoming growth arrest/senescence
and driving metastasis.(2) Another study has revealed that sustained mutp53
expression is required to maintain the prometastatic phenotype and that
platelet-derived growth factor receptor b (PDGFRb) is involved in
mutp53-driven PDAC metastasis.(3) These findings indicate that mutp53 is a
potential antimetastatic target for PDAC prevention. However, mutp53 proteins
have been proven to be undruggable to date.(4-5) Efforts have been focused
on searching for potential mediators of mutp53 activity in cancer progression,
and targeting of these related proteins might facilitate the suppression of
metastasis driven by mutp53.
NOP14 has been reported to be a nucleolar protein required for maturation of
18S rRNA and for 40S ribosome production.(6) Our preliminary data have
revealed that NOP14 causes increased PDAC cell growth and invasion and we
have also detected NOP14 mutations in primary and metastatic PDAC
tissues,(7-8) indicating a potential association between NOP14 and cancer
invasion. However, the correlation between dysregulated NOP14 and PDAC
5
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progression remains unclear, and little else is known about the mechanisms
underlying the function of NOP14 in the metastasis of p53 mutant tumors.
Herein, we demonstrated that PDAC cells with increased NOP14 expression
possess an enhanced invasive capacity. We also showed that NOP14 drives
PDAC metastasis by stabilizing mutp53 mRNA, thereby affecting its functional
targets. Overall, our data define a mechanism of the NOP14/mutp53
regulatory axis in suppressing P21 expression at both the transcriptional and
post-transcriptional levels by induction of microRNA-17-5p (miR-17-5p) in
PDAC cells.
MATERIALS and METHODS
Clinical specimens and cell lines
Tissues were collected as previously described.(9) The patient characteristics
are provided in Table S1. MIA PaCa-2, Su.86.86, T3M4, PANC-1, SW1990,
BxPC-3, and AsPC-1 cell lines were obtained from the American Type Culture
Collection (ATCC) and grown in DMEM or RPMI1640 with 10% FBS (HyClone)
at 37ºC in 5% CO2 cell culture incubator. Cell lines were tested and
authenticated 1 month before the experiment according to microscopic
morphology, growth curve analysis, and mycoplasma detection according to
the ATCC cell line verification test recommendations.
Quantification of RNAs and proteins
6
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Quantitative real-time PCR (qRT-PCR) analysis was performed using SYBR
Green PCR Master Mix with a Bio-Rad IQ5 qRT-PCR system. To determine
the miRNA levels, qRT-PCR was conducted using Taqman probes (Invitrogen,
Carlsbad, CA, USA) according to the manufacturer′s instructions. The primers
are shown in Table S2 and S3. Immunoblotting was performed as described
previously.(9) The antibodies used included those against NOP14, p53,
PDGFRb, EGFR, TGFB1, SMAD2, ZEB1, P21, and β-actin (p53, ZEB1, EGFR,
P21, and β-actin were purchased from CST; and NOP14, PDGFRb, SMAD2,
and TGFB1 were obtained from Abcam).
RNA sequencing and data analysis
Directional (stranded) libraries for the paired-end sequencing of PANC-1 cells
were generated with an Illumina platform. Differential expression analysis to
obtain sequence count data (fragments per kilobase of transcript per million
mapped reads [FPKM] values) was conducted using Cuffdiff.
Actinomycin D (ActD) treatment
PDAC cells were treated with 10 μg/ml ActD (Sigma-Aldrich) as described
previously,(10) and cells were collected various time intervals. The mutp53
mRNA and pri-miR-17-5p levels were determined by qRT-PCR.
Chromatin immunoprecipitation (ChIP) assay
ChIP assays were performed as previously described.(11) Briefly, protein A/G
Sepharose beads conjugated to anti-p53 antibody (Thermo Scientific) were
used to immunoprecipitate p53 form whole-cell lysates. Quantitative ChIP was
7
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performed with an ABI StepOne Plus using SYBR green dye.
PDAC cell-engrafted tumor mouse models
All experimental procedures involving animals were performed according to
the institutional ethical guidelines for animal experiments of Peking Union
Medical College.
Immunohistochemistry (IHC)
IHC was conducted to measure NOP14 and P21 expression using NOP14
(Sigma-Aldrich) and P21 (CST) antibody as previously described.(9)
Statistics
Each experiment was repeated at least three times. Student's t test (two-tailed)
was performed and three-group data were analyzed using one-way analysis of
variance. All statistical analyses were performed using SPSS 16.0 software
(SPSS Inc., Chicago, IL, USA). P-values <0.05 were considered statistically
significant.
Additional details are provided in online supplementary materials and
methods
RESULTS
Increased NOP14 expression is correlated with enhanced PDAC
metastasis.
8
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NOP14 mutations have been detected in the metastatic nodes of PDAC,
suggesting a potential role of NOP14 in PDAC invasion.(8) Here, we examined
the function of NOP14 in PDAC metastasis. Thus, IHC analysis was performed
to evaluate NOP14 expression in PDAC tissues from 20 patients, which
revealed that NOP14 expression was upregulated in the PDAC samples
compared with the matched normal controls (Fig.1A, B). Additionally, NOP14
overexpression was significantly increased in 7 metastases, including 4
hepatic, 2 peritoneum metastases, and 1 lymph node, as shown by IHC
analysis (Fig.1C, D; Table S4). These data indicated that NOP14 expression
was positively correlated with PDAC metastasis. To further confirm these
findings, NOP14 expression was measured in several PDAC cell lines as
shown in Fig.S1A. Further, the invasive capacity of these cells was evaluated
by in vitro invasion assays, which showed that PDAC cells with higher NOP14
levels exhibited increased invasiveness (Fig.S1B, C).
Altogether, these data demonstrate that increased NOP14 expression is
associated with enhanced PDAC invasion and metastasis.
NOP14 promotes PDAC cell migration and invasion.
Given the parallels between NOP14 and metastatic potential, we next
investigated the role of NOP14 in PDAC cell movement. Thus, we transfected
PANC-1 cells with a construct to achieve NOP14 overexpression (Fig.S2A, B).
Then, wound-healing assay was performed, which revealed that NOP14
overexpression led to increased cell migration compared with vector-treated
9
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PANC-1 cells (Fig.1E). We next inhibited NOP14 expression in PANC-1 cells
using a specific siRNA (si-NOP14) (Fig.S2C, D) and performed wound-healing
assay, which revealed that NOP14 inhibition resulted in reduced wound
closure compared with si-Con-treated cells (Fig.1E). Similar results were
observed in MIA PaCa-2 cells (Fig.S3A; Fig.S4). In vitro transwell and invasion
assays were employed to further evaluate the impact of NOP14 on PDAC cell
movement, which showed that cell migration and invasion was increased by
NOP14 overexpression and suppressed by NOP14 inhibition in PANC-1 cells
(Fig.1F). Similar results were observed in MIA PaCa-2 cells (Fig.S3B).
Moreover, the invasive capacity of PDAC cells into collagen gels was
determined in inverted invasion assay. We found that NOP14 overexpression
enhanced cell invasion and NOP14 inhibition led to decreased invasiveness
both in PANC-1 and MIA PaCa-2 cells (Fig.1G).
Altogether, our data demonstrate that NOP14 overexpression increases PDAC
cell migration and invasion.
NOP14 inhibition deceases the invasion of PDAC cell-engrafted tumors.
We next examined the effect of NOP14 on tumor invasion using transplanted
tumor mouse models. To this aim, we inhibited NOP14 in PANC-1 cells
expressing increased levels of NOP14 and with strong invasiveness using a
Lentivirus system expressing siRNA (Lenti-shNOP14) (Fig.S5A, B). Next,
Lenti-shNOP14- or Lenti-shCon-infected PANC-1 cells were subcutaneously
inoculated into the posterior flanks of nude mice. 4 weeks after tumor
10
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formation, we monitored the growth of transplanted tumors by
bioluminescence imaging (BLI) and observed that NOP14 inhibition
suppressed the growth of PANC-1-engrafted tumors (Fig. 2A). In agreement
with the tumor volumes, the weights of those that were treated with
Lenti-shNOP14 were significantly lower than the control tumors (Fig.2B).
Moreover, we performed H&E and NOP14 staining of randomly selected
mouse tumors and observed that NOP14 inhibition resulted in decreased
PDAC invasion to adjacent muscle tissues and downregulation of NOP14
expression (Fig.2C; Fig.S5C). Next, PANC-1 cells infected with
Lenti-shNOP14 or Lenti-shCon were orthotopically injected into the pancreas
of nude mice. NOP14 inhibition was found to significantly retard the growth of
transplanted PANC-1 cells (Fig.2D). Further, the Lenti-shCon-PANC-1 cells
exhibited extensive metastasis, as demonstrated by H&E staining in the
dissected tissue samples, whereas the Lenti-shNOP14-PANC-1 cells failed to
metastasize to the majority of the examined tissues (Fig.2E, F).
Altogether, these data indicate that NOP14 inhibition suppresses the invasion
of PANC-1-engrafted tumors.
NOP14 inhibition contributes to reduced metastasis of PDAC cells in
vivo.
To confirm the above findings, we further conducted in vivo invasion assays.
Thus, 5×105 viable PANC-1 cells infected with Lenti-shNOP14 or Lenti-shCon
were resuspended in 0.1 ml PBS and injected into the lateral tail veins of SCID
11
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mice. Eight weeks after injection, the animals were sacrificed, and metastasis
progression was monitored. The metastatic capacity of the
Lenti-shNOP14-infected PANC-1 cells was found to be decreased compared
with that of the Lenti-shCon-infected cells (Fig.2G). Next, the lungs and livers
were dissected for microscopic histological analysis, which revealed extensive
metastasis to the lungs in the SCID mice infected with Lenti-shCon-PANC-1
cells (4/5); in addition, NOP14 inhibition significantly decreased the frequency
of lung metastasis (1/5), and the lung weights dissected from the
Lenti-shNOP14-infected mice were significantly decreased compared with
those from the Lenti-shCon-infected mice (Fig.2H). Further, NOP14
expression was decreased in the examined lung tissues, as demonstrated by
IHC analysis (Fig.2I; Fig.S5D). No significant changes were observed in the
outward appearances of the livers (data not shown).
Together, our findings indicate that NOP14 inhibition decreases the metastatic
capacity of PDAC cells.
Identification of a gene expression signature of NOP14 induction in
PDAC cells.
To identify a genetic signature that may be associated with the
NOP14-mediated PDAC metastasis, we performed whole transcriptome
RNA-sequencing (RNA-seq) analysis using PANC-1 cells with NOP14
overexpression or inhibition. The expression levels of 144 and 100 genes were
found to be positively and negatively correlated with that of NOP14,
12
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respectively (Fig.3A; Table S5). Among these 244 genes, most were involved
in physiological regulation (45%) and cellular metabolism (31%), and a few
(12%) were involved in cell growth (Fig.3B). To further narrow down the genes
related to PDAC metastasis, those genes from the RNA-seq dataset with at
least a 1.5-fold increase or decrease in their expression in PANC-1 cells with
NOP14 overexpression or inhibition were selected. A set of 22 genes was
validated by qRT-PCR, which indicated that the expression of a number of
oncogenes, including PDGFRb, SLUG, ZEB1, EGFR, SMAD2, TWIST1,
S100A4, PIM1, and E2F1, was positively regulated by NOP14 and that the
expression of several tumor suppressor genes, including TP63, P21, and
TP53I3, was negatively regulated by NOP14 in PANC-1 and MIA PaCa-2 cells
(Fig.3C). PANC-1 and MIA PaCa-2 cells carry mutations in p53, and we
observed that mutp53 expression was upregulated both in these two cells with
NOP14 overexpression, whereas it was downregulated with NOP14 inhibition,
as shown by qRT-PCR and immunoblotting analyses (Fig.3D).
Together, these data indicate that a number of tumor-related genes are
involved in NOP14-driven PDAC progression.
NOP14 regulates PDAC metastasis by stabilizing mutp53 mRNA.
Because an alteration in the steady-state level of mutp53 mRNA could be
attributed to the induction of either transcription or mRNA degradation by
NOP14, we sought to directly explore whether NOP14 inhibition affects the
stability of mutp53 mRNA. To this aim, PANC-1 and MIA PaCa-2 cells were
13
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treated with ActD to inhibit transcription, which resulted in a decreased mutp53
mRNA half-life in cells with NOP14 inhibition compared with si-Con-treated
cells (Fig.3E). These data indicated that NOP14 enhanced the stability of
mutp53 mRNA in PDAC cells. Interestingly, several of the above-mentioned
genes have been reported to be direct or indirect effectors of p53 in diverse
cancers.(2-3, 12-14) To determine whether these genes are regulated by
mutp53 in PDAC cells, qRT-PCR and immunoblotting analyses were
performed and we found that mutp53 inhibition led to increased expression of
P21 and decreased expression of PDGFRb, TGFB1, ZEB1, EGFR, and
SMAD2 in PANC-1 and MIA PaCa-2 cells (Fig.3F; Fig.S6). Further, the
expression of EGFR, TGFB1, ZEB1, and SMAD2 were upregulated and
downregulated in PANC-1 and MIA PaCa-2 cells with NOP14 overexpression
and inhibition, respectively, and P21 expression was negatively regulated by
NOP14 in these two cells, as shown by immunoblotting analysis (Fig.3G).
Although NOP14 overexpression promoted cell invasion in both PANC-1 and
MIA PaCa-2 cells, the target genes were not the same, i.e. PDGFRb was
regulated by the NOP14/mutp53 axis in MIA PaCa-2 cells but not in PANC-1
cells (Fig.3G). These discrepancies might be attributed to different p53
mutation sites.
Together, these data demonstrate that NOP14 affects the expression of
mutp53 targets by regulating the stability of mutp53 mRNA (Fig.3H).
NOP14 promotes PDAC metastasis by regulating miR-17-5p expression
14
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We further identified the miRNAs induced by NOP14 in PANC-1 cells by
miRNA sequencing (miRNA-seq). Analysis of the miRNA-seq data revealed
that the expression of 46 miRNAs was induced by NOP14 whereas that of 42
miRNAs was inhibited by NOP14 in PANC-1 cells (Fig.4A). Among these 88
miRNAs, most were found to be involved in tumorigenesis and progression
(55%), cellular metabolism (3%), and immune regulation (1%) (Fig.4B). Among
these cancer-related miRNAs, the expression of miR-17-92 family, miR-31,
miR-1244, and miR-4517, was significantly induced by NOP14. To confirm
these findings, we performed qRT-PCR using PANC-1 and MIA PaCa-2 cells
with NOP14 overexpression or inhibition and found similar alterations in
miR-17-5p expression (Fig.4C, D). Because previous studies have indicated
that miR-17-5p promotes cancer metastasis,(15-16) we next examined
whether NOP14 enhances the invasive capacity by inducing miR-17-5p
expression in PDAC cells. Thus, we conducted a series of rescue experiments.
NOP14 was overexpressed in PANC-1 cells, thereby resulting in increased
miR-17-5p expression. The upregulation of miR-17-5p was suppressed by a
specific inhibitor (Anti-17-5p), as demonstrated by qRT-PCR (Fig.4E).
Subsequent in vitro transwell and invasion assays revealed that miR-17-5p
inhibition to prevent the induction of NOP14 caused decreased cell migration
and invasion (Fig.4F). Further, PANC-1 cells were transfected with miR-17-5p
mimic to rescue the downregulated expression of endogenous miR-17-5p
induced by NOP14 inhibition (Fig.4G). Subsequent in vitro transwell and
15
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invasion assays indicated that miR-17-5p overexpression to prevent NOP14
inhibition led to increased cell migration and invasion (Fig.4H). Similar results
were observed in MIA PaCa-2 cells subjected to the same treatment (Fig.S7).
Taken together, these data indicate that NOP14 promotes PDAC metastasis at
least partly by inducing miR-17-5p expression.
P21 is a direct target of miR-17-5p in PDAC cells
P21 has been reported to be a target of miR-17-5p in diverse cancer cells and
in pancreatic cancer stem cells.(17-18) We further investigated the correlation
between miR-17-5p and P21 in PDAC cells. Thus, PANC-1 and MIA PaCa-2
cells were transfected with a p21-3´UTR-wild-type or p21-3´UTR-mutant
luciferase reporter, and luciferase activity was assessed, which demonstrated
that endogenous miR-17-5p repressed the luciferase activity of the wild-type
reporter, whereas mutation of the miR-17-5p sites abrogated this reduction
(Fig.5A, B; Fig.S8). Further, miR-17-5p overexpression resulted in reduced
P21 expression, and miR-17-5p inhibition led to upregulation of P21 in PANC-1
and MIA Pa2Ca-2 cells (Fig.5C). These data indicate that miR-17-5p regulates
P21 expression by binding to its complementary sites. NOP14 enhanced
miR-17-5p expression in PDAC cells, suggesting that P21 expression might be
affected by NOP14. This notion was validated by the above-mentioned
findings. Additionally, immunostaining analysis was performed to evaluate P21
expression in PANC-1 cells with miR-17-5p overexpression or inhibition,
revealing that miR-17-5p repressed its expression (Fig.5D). Similar results
16
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were observed in PANC-1 cells with NOP14 overexpression or inhibition
(Fig.5E), indicating a positive regulatory association between NOP14 and
miR-17-5p.
We also investigated whether P21 was expressed at lower levels in PDAC
tissues with upregulated miR-17-5p expression. qRT-PCR was conducted to
assess 20 paired PDAC tissues, demonstrating that the miR-17-5p levels were
increased in these samples (Fig.5F). Moreover, P21 expression was
significantly downregulated in these specimens, as shown by IHC analysis
(Fig.5G).
Altogether, these findings indicate P21 is a direct target of miR-17-5p in PDAC
cells.
NOP14 induces miR-17-5p expression by stabilizing mutp53 mRNA
To explore the mechanism underlying the impact of NOP14 on the
upregulation of miR-17-5p in PDAC cells, we first evaluated the RNA stability
of primary miR-17-5p (pri-miR-17-5p) in PANC-1 and MIA PaCa-2 cells. We
found that NOP14 inhibition did not affect the stability of pri-miR-17-5p in these
two cells (Fig.S9). We next assessed whether NOP14 regulates miR-17-5p
expression at the transcriptional level. miR-17-92 family has been
demonstrated to be a transcriptional target of p53 in colorectal carcinoma and
B cell chronic lymphocytic leukemia.(11, 19) We showed that NOP14
enhanced the stability of mutp53 mRNA in PDAC cells, as stated above. Thus,
17
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we hypothesized that NOP14 induces miR-17-5p expression by stabilizing
mutp53 mRNA in PDAC cells. To test this idea, we measured miR-17-5p
expression in PANC-1 and MIA PaCa-2 cells with NOP14 inhibition and found
that si-NOP14 treatment led to decreased expression of pri-miR-17-5p and
miR-17-5p precursor (pre-miR-17-5p), as shown by qRT-PCR (Fig.6A). We
next performed qRT-PCR to evaluate miR-17-5p expression in PANC-1 and
MIA PaCa-2 cells with mutp53 inhibition and observed that si-p53 treatment
reduced the levels of pri-miR-17-5p and pre-miR-17-5p in these two cells
(Fig.6B). The direct binding of mutp53 to the promoter of miR-17-5p in PANC-1
and MIA PaCa-2 cells was validated by luciferase reporter gene assay and
ChIP analysis (Fig.6C, D). We further transfected NOP14-overexpressing
PANC-1 and MIA PaCa-2 cells with si-p53 and found that si-p53 treatment to
prevent the induction of NOP14 led to decreased miR-17-5p expression, as
shown by qRT-PCR (Fig.6E). The following rescue assay revealed that
miR-17-5p overexpression to prevent the suppression of si-p53 on P21
expression led to increased cell invasion (Fig.6F, G).
Altogether, our data indicate that NOP14-induced PDAC metastasis is at least
partly due to mutp53-regulated miR-17-5p/P21 signaling (Fig.6H).
NOP14 expression and PDAC progression
To determine the physiological relevance of NOP14 in PDAC, we performed
IHC analysis on sections of PDAC and adjacent normal tissues (Table S6).
Representative NOP14-staining on tissue microarrays (TMAs) containing 90
18
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core pancreatic cancer tissue specimens, including 82 paired PDAC samples,
is shown on Fig.7A. We scored NOP14 expression in the core specimens on a
scale from 0 (no expression) to 2 (high expression) based on the IHC scores of
NOP14 and observed that NOP14 expression was increased in the PDAC
samples (Fig.7B). These findings are consistent with those obtained for the
above-mentioned 20 PDAC tissues. The correlation between NOP14
expression and PDAC progression was further explored, which revealed that
PDAC patients with increased NOP14 levels in tumors tended to have tumor
invasion and more aggressive tumor phenotypes (Fig.7C, D, E; Table S6).
Additionally, a higher NOP14 level was found to be correlated with shorter OS,
as demonstrated by Kaplan-Meier analysis (P=0.008) (Fig.7F).
Taken together, these data indicate that increased NOP14 expression is
correlated with PDAC development.
Discussion
Cancer cells expressing mutp53 possess the oncogenic capacity to promote
cell proliferation, survival, and metastasis, indicating that targeting mutp53
may be a potential therapeutic strategy for cancer prevention. Because no
effective strategies have been validated for the targeting of mutp53, recent
studies have focused on elucidating the mechanisms underlying the regulation
of mutp53-induced oncogenic signaling. A number of molecules have been
identified as potential mediators of mutp53 function in cancer progression,
such as PDGFRb, proteins involved in integrin recycling, mevalonate pathway,
19
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and miRNA biogenesis.(3, 20-22) Here, we showed that NOP14 promoted
PDAC metastasis by stabilizing mutp53 mRNA in PANC-1 (Trp53R273H) and
MIA PaCa-2 (Trp53 R248W) cells. These data suggest that NOP14 acts as a
specific regulator of mutp53 and define a novel mechanism for understanding
the oncogenic role of mutp53 in tumorigenesis.
Given that NOP14 increases the mutp53 protein levels by stabilizing mutp53
mRNA, we proposed that NOP14 might affect mutp53-induced oncogenic
signaling. We performed RNA-seq to identify the functional targets of NOP14
involved in PDAC metastasis. A number of protein-encoding genes were
verified to be regulated by NOP14. Among them, P21, EGFR, SMAD2,
TWIST1, and TP63 are downstream mediators of p53 and these proteins are
regulated by mutp53 in PDAC cells, suggesting that NOP14 promotes invasion
and metastasis by regulating the stability of mutp53 mRNA, thereby affecting
the associated signaling pathways.
miRNA-seq data revealed that miR-17-5p expression was significantly
regulated by NOP14 in PDAC cells. miR-17-5p has been previously shown to
be induced by c-Myc.(23) However, we found that NOP14 did not affect the
c-Myc levels in PDAC cells (Fig.S10), indicating that NOP14 regulated
miR-17-5p expression through other proteins. Another study has demonstrated
that miR-17-5p is negatively regulated by wild-type p53 in HCT116 colon
cancer cells.(11) Our data confirmed this finding in PANC-1 and MIA PaCa-2
cells SW1990 cells and revealed that miR-17-5p was regulated by mutp53.
20
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Taken together, our results indicate that NOP14 promotes mutp53-driven
PDAC metastasis, at least partly through miR-17-5p-mediated P21 signaling.
More interestingly, P21 was not only validated as a direct transcriptional target
of mutp53, but it was also found to be inhibited by miR-17-5p, demonstrating
that the NOP14/mutp53 regulatory axis affects P21 expression at both the
transcriptional and post-transcriptional levels. Further analysis of the RNA-seq
and miRNA-seq data validated that several tumor-related genes, including
TP63 (target of miR-20a and let-7i), BCL2 (target of miR-195 and miR-34), and
PDGFRb (target of miR-195), were transcriptional targets of p53 and that
these miRNAs were also directly regulated by p53.(3-4, 24-26) These results
revealed a global mechanism that increased understanding of the influences of
the NOP14/mutp53 regulatory axis on its downstream molecules, i.e. the
expression of the p53 transcriptional effectors was also found to be regulated
by p53-induced miRNAs at the post-transcriptional level (Fig.6H).
In summary, our data define the function and mechanism of NOP14 in
mutp53-driven PDAC metastasis. Thus, targeting of NOP14 may represent a
realistic approach for the prevention of PDAC with mutp53.
Acknowledgements
We thank Shuangni Yu, Hui Zhang, and Hongkai Zhang for providing
assistance with IHC analysis and Bo Rong for providing assistance with ChIP
assay.
21
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Figure legends
Fig.1. NOP14 promotes PDAC cell migration and invasion.
(A) Representative images of NOP14-staining of the PDAC and matched normal tissues
(NC). Magnification: 40×. Bars: 500 μm. Images shown in the top-right panels represent
the magnified views. (B) Evaluation of NOP14 expression in PDAC tissues is shown. (C)
Representative images of NOP14-staining of in 7 metastases. Magnification: 40×. Bars:
500 μm. The boxes show the enlarged areas. (D) Evaluation of NOP14 expression in the
metastases is shown. (E) Wound-healing assays were conducted in PANC-1 cells with
NOP14 overexpression or inhibition. Wounds were photographed, and the wound closure
percentage from a representative experiment (n=3) was measured using AxioVision
25
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software. Bars: 500 μm. (F) In vitro transwell and invasion assays were performed in
PANC-1 cells with NOP14 overexpression or inhibition. Representative images are shown.
Magnification: 100×. Bar: 200 μm. Normalized ratios of migrated or invasive cells are
shown in the bottom panels. (G) PANC-1 and MIA PaCa-2 cells with NOP14
overexpression or inhibition were allowed to invade into collagen for 24 h before
quantification. Representative three-dimensional (3D) reconstructions of each condition
selected from three repeated experiments are shown in the top panels. Cells were stained
for F-actin (red) and DAPI (blue). The dashed line indicates the approximate position of
the transwell membrane, and the arrow indicates the direction of cell movement. The
average numbers of invaded cells for six replicates ± SD are shown in the bottom panels.
Fig.2. NOP14 inhibition suppresses PDAC cell invasion in vivo.
(A) NOP14 inhibition decreased the tumor formation capacity of PANC-1 cells as
observed in xenograft models. Representative IVIS images of nude mice are shown, and
there were 6 mice in each group. The right panel shows the tumor volumes on the
indicated days. (B) Photographs of dissected tumors from nude mice and the tumor
weights calculated at the end of the experiment are shown in the right panel. (C)
Pathological analysis of tissue sections from recipient mice at 8 weeks post-injection.
H&E- and NOP14-staining were performed. Bars: 500 μm. The boxes show the enlarged
areas. The arrows indicate the muscle tissues invaded by PDAC cells. Normalization of
NOP14 expression is shown in the right panel. (D) Representative IVIS images of a
mouse orthotopic pancreatic tumor model are shown, and there were 5 mice in each
group. (E) The primary pancreas tissues, lungs, livers, and kidneys were dissected for
26
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microscopic histological analysis. The numbers of metastatic nodes were calculated and
shown in the right panel. (F) Representative images obtained in histological analysis,
which was conducted on sections from the primary pancreas tissues, liver, lung, spleen,
mesentery, appendix, diaphragm, and colon tissues. The images shown in the top-left or
bottom-right panels represent magnified views of the boxed regions. (G) SCID mice were
injected with Lenti-shNOP14- or Lenti-shCon-infected PANC-1 cells through the lateral tail
vein. (H) The lungs were dissected for microscopic histological analysis, and the wet
weights of the lungs are shown. (I) Representative images of H&E and NOP14 stained
lung tissues are shown in the left panel, and the NOP14 expression scores are shown in
the right panel.
Fig.3. Genome-wide target identification indicates mutp53 as a functional effector
of NOP14 in PDAC cells.
(A) Cluster heat map of mRNA expression profiles in PANC-1 cells with NOP14
overexpression or inhibition. (B) Analysis of the gene expression profiles revealed that the
expression of 144 genes was positively regulated by NOP14 whereas 100 genes was
negatively correlated with the NOP14 level in PANC-1 cells. (C) The expression of 22
genes was validated in PANC-1 and MIA PaCa-2 cells by qRT-PCR. GAPDH served as a
loading control. (D) The expression of mutp53 was determined in PANC-1 and MIA
PaCa-2 cells with NOP14 overexpression or inhibition by qRT-PCR and immunoblotting
analyses. GAPDH and β-actin were used as a loading control, respectively. (E) PANC-1
and MIA PaCa-2 cells were transfected with si-NOP14, and total RNA was isolated at
different time points after ActD addition. The stability of mutp53 mRNA was determined by
27
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qRT-PCR. (F, G) The expression of p53 targets was validated in PANC-1 and MIA PaCa-2
cells with si-p53 transfection by qRT-PCR (F), and immunoblotting analysis (G). β-actin
served as a loading control. (H) Schematic representation of NOP14-induced signaling
molecules involved in regulating PDAC metastasis.
Fig. 4. NOP14 promotes PDAC metastasis by regulating miR-17-5p expression.
(A) Cluster heat map of miRNA expression profiles in PANC-1 cells with NOP14
overexpression or inhibition. (B) Analysis of the miRNA expression profiles showed that
the expression of 46 miRNAs was positively regulated by NOP14 whereas 42 miRNAs
was negatively correlated with the NOP14 level in PANC-1 cells. (C, D) The expression of
several miRNAs was validated in PANC-1 and MIA PaCa-2 cells (C). miR-17-5p
expression depicted similar alterations in these two cells with NOP14 overexpression or
inhibition as shown by qRT-PCR. U6 snRNA served as a loading control (D). (E) The
expression of miR-17-5p was evaluated in PANC-1 cells with miR-17-5p inhibition
following transfection with an NOP14 construct. U6 snRNA served as a loading control. (F)
In vitro transwell, and invasion assays were conducted in the rescue experiments.
Magnification: 100×. The normalized ratios of migrated or invasive PANC-1 cells are
shown in the right panels. (G) The expression of miR-17-5p was evaluated in PANC-1
cells with miR-17-5p overexpression upon transfection with si-NOP14. U6 snRNA served
as a loading control. (H) In vitro transwell, and invasion assays were performed in the
rescue experiments. Magnification: 100×. The normalized ratios of migrated or invasive
PANC-1 cells are shown in the right panels.
Fig.5. P21 is a direct target of miR-17-5p in PDAC cells.
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(A) Sequence in the 3′-UTR of P21 targeted by miR-17-5p. The sequences shaded in gray
represent mutants of the miR-17-5p-matched seed sequence. (B) Endogenous miR-17-5p
expression decreased luciferase activity when linked to the segment containing the target
sequence within the 3′-UTR of P21 mRNA in PANC-1 cells. Mutation of this sequence
abolished miR-17-5p-dependent repression. (C) miR-17-5p overexpression decreased
the P21 protein levels, and miR-17-5p inhibition increased P21 expression in PANC-1 and
MIA PaCa-2 cells, as demonstrated by immunoblotting analysis. β-actin served as a
loading control. The numbers below the panels represent the normalized protein
expression levels. (D) Immunofluorescence microscopy of PANC-1 cells stained with
anti-P21, F-actin, and DAPI (nuclei), showing decreased P21 staining after a miR-17-5p
mimic treatment and increased P21 staining following Anti-17-5p treatment. Bars: 20 μm.
(E) Immunofluorescence staining revealed decreased P21 expression in PANC-1 cells
with NOP14 overexpression and increased P21 expression in these cells with NOP14
inhibition. Bars: 20 μm. (F) miR-17-5p expression was upregulated in 20 PDAC tissues,
as shown by qRT-PCR. U6 snRNA served as a loading control. NC indicates the matched
normal control. (G) Representative images from P21 staining of the same samples
described in panel F. Magnification: 200×. Bars: 50 μm. The P21 expression scores are
shown in the bottom panel.
Fig.6. NOP14 inhibition results in decreased miR-17-5p levels by stabilizing mutp53
mRNA.
(A) The pri- and pre-miR-17-5p levels were determined in PANC-1 and MIA PaCa-2 cells
with NOP14 inhibition by qRT-PCR. GAPDH served as a loading control. (B) The
29
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expression of pri-, pre- and mature miR-17-5p was evaluated in PANC-1 and MIA PaCa-2
cells with p53 inhibition by qRT-PCR. GAPDH (pre-miR-17-5p and pri-miR-17-5p) and U6
snRNA (mature miR-17-5p) served as loading controls. (C) Mutp53 inhibition in PANC-1
and MIA PaCa-2 cells resulted in decreased luciferase activity when linked to the segment
containing the target sequence within the promoter of miR-17-92 family. Mutation of the
target sequence abolished mutp53-dependent activation. (D) ChIP assay using p53
antibody on PANC-1 and MIA PaCa-2 cells. The values are the mean ± SD. (E) Rescue
assays were conducted on PANC-1 and MIA PaCa-2 cells, showing that NOP14
increased the expression of miR-17-5p by stabilizing mutp53 mRNA. (F) In vitro invasion
assay was performed in the rescue assay. Representative images are shown
(Magnification: 100×). The normalized ratio of invasive cells is shown in the bottom panels.
(G) The p53 and P21 protein levels were assessed in PDAC cells conducted rescue assay.
β-actin served as a loading control. The numbers below the panels represent the
normalized protein expression levels. (H) Schematic representation of NOP14 function in
mutp53-driven PDAC metastasis.
Fig.7. Increased NOP14 expression is correlated with PDAC progression.
(A) Representative images of NOP14-stained paired PDAC tissues. Magnification: 20×.
Bars: 1000 μm. The boxes show the enlarged areas. (B) Quantification of NOP14
expression, as determined by IHC analysis of a TMA containing 82 matched PDAC and
normal tissues. (C) NOP14 expression was correlated with PDAC progression. (D, E)
NOP14 expression levels were scored from 0 (negative) to 2 (high expression). The
numbers of paired PDAC tissues are indicated on the tops of the columns. Significance
30
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was assessed using the Mann-Whitney test. ⎯X = mean. Patients with high tumor NOP14
expression tended to have local invasion (D) and lymph invasion (E). (F) Comparison of
the OS of patients with different NOP14 levels using the Kaplan-Meier method. P=0.0080.
31
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Pancreatic cancer progression relies upon mutant p53-induced oncogenic signaling mediated by NOP14
Yongxing Du, Ziwen Liu, Lei You, et al.
Cancer Res Published OnlineFirst March 9, 2017.
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