Sudden Motility Reversal Indicates Sensing of Magnetic Field Gradients in Magnetospirillum Magneticum AMB-1 Strain
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Physiological Characteristics of Magnetospirillum Gryphiswaldense
www.nature.com/scientificreports OPEN Physiological characteristics of Magnetospirillum gryphiswaldense MSR-1 that control cell growth Received: 18 October 2016 Accepted: 21 April 2017 under high-iron and low-oxygen Published: xx xx xxxx conditions Qing Wang1,5, Xu Wang1,5, Weijia Zhang2,5, Xianyu Li3, Yuan Zhou1, Dan Li1, Yinjia Wang4, Jiesheng Tian1,5, Wei Jiang1,5, Ziding Zhang 1, Youliang Peng1, Lei Wang4, Ying Li1,5 & Jilun Li1,5 Magnetosome formation by Magnetospirillum gryphiswaldense MSR-1 is dependent on iron and oxygen levels. We used transcriptome to evaluate transcriptional profiles of magnetic and non-magnetic MSR-1 cells cultured under high-iron and low-iron conditions. A total of 80 differentially expressed genes (DEGs) were identified, including 53 upregulated and 27 downregulated under high-iron condition. These DEGs belonged to the functional categories of biological regulation, oxidation-reduction process, and ion binding and transport, and were involved in sulfur metabolism and cysteine/methionine metabolism. Comparison with our previous results from transcriptome data under oxygen-controlled conditions indicated that transcription of mam or mms was not regulated by oxygen or iron signals. 17 common DEGs in iron- and oxygen-transcriptomes were involved in energy production, iron transport, and iron metabolism. Some unknown-function DEGs participate in iron transport and metabolism, and some are potential biomarkers for identification ofMagnetospirillum strains. IrrA and IrrB regulate iron transport in response to low-oxygen and high-iron signals, respectively. Six transcription factors were predicted to regulate DEGs. Fur and Crp particularly co-regulate DEGs in response to changes in iron or oxygen levels, in a proposed joint regulatory network of DEGs. -
Magnetotactic Bacteria and Their Application in Medicine
Chem cal ist si ry y & h P B f i o o Dasdag and Bektas. J Phys Chem Biophys 2014, 4:2 p l h a Journal of Physical Chemistry & y n s r DOI: 10.4172/2161-0398.1000141 i u c o s J ISSN: 2161-0398 Biophysics ResearchReview Article Article OpenOpen Access Access Magnetotactic Bacteria and their Application in Medicine Suleyman Dasdag1* and Hava Bektas2 1Department of Biophysics, Medical School of Dicle University, Diyarbakir, Turkey 2Department of Biophysics, Medical School of Yuzuncu Yil University, Van / Turkey Abstract It is a known fact how the magnetic field of the Earth is very important for life. Relation between living systems and the earth magnetic field has been investigated for many years. Birds and their migration routes are the first one of the things that comes to mind when we state living things. The Earth’s magnetic field is still accepted to be the main factor for birds and other flying living beings to complete their travels correctly. The changes in migration routes, which are observed from time to time, are sometimes said to be due to the changes in the magnetic field. However, no light has been shed to this matter yet. The Earth’s magnetic field has not been sufficiently studied, and its role on small living models such as bacteria has not been adequately discussed. One of the best examples in this field is relation between the Earth’s magnetic field and “magnetotactic bacteria (MTB)”, which were discovered by Salvatore Bellini in 1963. Currently, it is claimed that magnetotactic bacteria have a widespread use in microbiology, mineralogy, limnology, physics, biophysics, chemistry, biochemistry, geology, crystallography, and astrobiology. -
Magnetospirillum Gryphiswaldense
Mechanism and regulation of magnetosomal iron uptake and biomineralization in Magnetospirillum gryphiswaldense Dissertation der Fakultät für Biologie der Ludwig-Maximilians-Universität München vorgelegt von René Uebe aus Stralsund München 19.12.2011 II Gutachter: 1. Prof. Dr. Dirk Schüler 2. Prof. Dr. Heinrich Jung Tag der mündlichen Prüfung: 02.05.12 III IV Publications and manuscripts originating from this thesis CHAPTER 2 Uebe, R., Voigt, B., Schweder, T., Albrecht, D., Katzmann, E., Lang, C., Böttger, L., Matzanke, B. and Schüler, D. (2010). Deletion of a fur-like gene affects iron homeostasis and magnetosome formation in Magnetospirillum gryphiswaldense. J. Bacteriol. 192: 4192-4204. CHAPTER 3 Uebe, R., Junge, K., Henn, V., Poxleitner, G., Katzmann, E., Plitzko, J. M., Zarivach, R., Kasama, T., Wanner, G., Pósfai, M., Böttger, L., Matzanke, B. and Schüler, D. (2011). The cation diffusion facilitator proteins MamB and MamM of Magnetospirillum gryphiswaldense have distinct and complex functions, and are involved in magnetite biomineralization and magnetosome membrane assembly. Mol. Microbiol. 82: 818-835. CHAPTER 4 Uebe, R., Henn, V. and Schüler, D. (2012). The MagA protein of magnetospirilla is not involved in bacterial magnetite biomineralization. J. Bacteriol. 194: 1018-1023 V VI INDEX INDEX PUBLICATIONS AND MANUSCRIPTS ORIGINATING FROM THIS THESIS......................V INDEX.................................................................................................................................................VII ABBREVIATIONS -
Design and Fabrication of Nonconventional Optical Components by Precision Glass Molding
Design and Fabrication of Nonconventional Optical Components by Precision Glass Molding DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Peng He Graduate Program in Industrial and Systems Engineering The Ohio State University 2014 Dissertation Committee: Dr. Allen Y. Yi, Advisor Dr. Jose M. Castro Dr. L. James Lee Copyright by Peng He 2014 Abstract Precision glass molding is a net-shaping process to fabricate glass optics by replicating optical features from precision molds to glass at elevated temperature. The advantages of precision glass molding over traditional glass lens fabrication methods make it especially suitable for the production of optical components with complicated geometries, such as aspherical lenses, diffractive hybrid lenses, microlens arrays, etc. Despite of these advantages, a number of problems must be solved before this process can be used in industrial applications. The primary goal of this research is to determine the feasibility and performance of nonconventional optical components formed by precision glass molding. This research aimed to investigate glass molding by combing experiments and finite element method (FEM) based numerical simulations. The first step was to develop an integrated compensation solution for both surface deviation and refractive index drop of glass optics. An FEM simulation based on Tool-Narayanaswamy-Moynihan (TNM) model was applied to predict index drop of the molded optical glass. The predicted index value was then used to compensate for the optical design of the lens. Using commercially available general purpose software, ABAQUS, the entire process of glass molding was simulated to calculate the surface deviation from the adjusted lens geometry, which was applied to final mold shape modification. -
Mixotrophic Magnetosome-Dependent Magnetoautotrophic Metabolism of Model Magnetototactic Bacterium Magnetospirillum Magneticum A
Mixotrophic Magnetosome-Dependent Magnetoautotrophic Metabolism of Model Magnetototactic Bacterium Magnetospirillum magneticum AMB-1 Dissertation Presented In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Eric Keith Mumper, BA Graduate Program in the School of Earth Sciences The Ohio State University 2019 Dissertation Committee: Steven K. Lower, Adviser Brian H. Lower Ratnasingham Sooryakumar Ann E. Cook Copyright by Eric Keith Mumper 2019 Abstract Magnetospirillum magneticum AMB-1 is a member of a phylogenetically diverse group of bacteria characterized by their ability to biomineralize magnetic minerals known collectively as magnetotactic bacteria (MTB).1,2,3 MTB produce chains of membrane- bound intracellular magnetic nanocrystals, collectively known as magnetosomes.1,2,3 The current scientific consensus is that magnetosomes are used by MTB to orient themselves in vertically stratified water columns in order to achieve optimal oxygen concentrations in a process known as magnetoaerotaxis.4,5 Biomineralization of magnetosomes is an energy intensive process which accounts for roughly 33% of the cell's metabolic budget.6 This high metabolic cost seems to contradict with the amount of time MTB cells spend aligned with external magnetic fields.5 Due to this apparent discrepancy, I examined the potential role the magnetosome may play in bacterial metabolism. Through analysis of comparative growth on a variety of media compositions both magnetic, wild type and non-magnetic, mutant strains of AMB-1, I discovered that cells grown under stress conditions exhibit an inversion of growth dynamics which indicates some advantage for magnetic cells. Non-magnetic, mutant cells display a direct relationship between external magnetic field strength and growth, indicating magnetic field dependence. -
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Tooling & Molds User Guide
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DOCUMENT RESUME ED 422 492 CE 077 015 TITLE Mold Making Series. Educational Resources for the Machine Tool Industry. Course Syllabi, Instructor's Handbook, [and] Student Laboratory Manual. INSTITUTION Texas State Technical Coll. System, Waco. SPONS AGENCY Office of Vocational and Adult Education (ED), Washington, DC.; National Science Foundation, Arlington, VA. Div. of Undergraduate Education. PUB DATE 1998-00-00 NOTE 1508p.; For related documents, see ED 401 431-445 and CE 077 005-017. Product of the MASTER (Machine Tool Advanced Skills Technology Educational Resources) Consortium. CONTRACT DUE-9553716 AVAILABLE FROM Online at http://machinetool.tstc.edu PUB TYPE Guides - Classroom - Learner (051)-- Guides Classroom - Teacher (052) EDRS PRICE MF12/PC61 Plus Postage. DESCRIPTORS Behavioral Objectives; Competence; *Competency Based Education; Computer Assisted Design; *Computer Assisted Manufacturing; Consortia; Curriculum Design; Curriculum Guides; Employment Qualifications; Entry Workers; Equipment Utilization; Job Skills; Learning Activities; Learning Modules; *Machine Tool Operators; Machine Tools; Manufacturing Industry; Numerical Control; Postsecondary Education; *Production Technicians; *Technical Education; Vocational Education IDENTIFIERS DACUM Process; *Moldmaking ABSTRACT This package consists of a course syllabi, an instructor's handbook, and a student laboratory manual for a 2-year vocational training program to prepare students for entry-level employment as mold makers.The program was developed through a modification of the -
Uncanny Xmen Box
Official Advanced Game Adventure CAMPAIGN BOOK TABLE OF CONTENTS What Are Mutants? ....... .................... ...2 Creating Mutant Groups . ..... ................ ..46 Why Are Mutants? .............................2 The Crime-Fighting Group . ... ............. .. .46 Where Are Mutants? . ........ ........ .........3 The Tr aining Group . ..........................47 Mutant Histories . ................... ... ... ..... .4 The Government Group ............. ....... .48 The X-Men ..... ... ... ............ .... ... 4 Evil Mutants ........................... ......50 X-Factor . .......... ........ .............. 8 The Legendary Group ... ........... ..... ... 50 The New Mutants ..... ........... ... .........10 The Protective Group .......... ................51 Fallen Angels ................ ......... ... ..12 Non-Mutant Groups ... ... ... ............. ..51 X-Terminators . ... .... ............ .........12 Undercover Groups . .... ............... .......51 Excalibur ...... ..............................12 The False Oppressors ........... .......... 51 Morlocks ............... ...... ......... .....12 The Competition . ............... .............51 Original Brotherhood of Evil Mutants ..... .........13 Freedom Fighters & Te rrorists . ......... .......52 The Savage Land Mutates ........ ............ ..13 The Mutant Campaign ... ........ .... ... .........53 Mutant Force & The Resistants ... ......... ......14 The Mutant Index ...... .... ....... .... 53 The Second Brotherhood of Evil Mutants & Freedom Bring on the Bad Guys ... ....... -
Magnetospirillum Gryphiswaldense Dirk Schüler, Caroline Monteil, Christopher Lefèvre
Magnetospirillum gryphiswaldense Dirk Schüler, Caroline Monteil, Christopher Lefèvre To cite this version: Dirk Schüler, Caroline Monteil, Christopher Lefèvre. Magnetospirillum gryphiswaldense. Trends in Microbiology, Elsevier, 2020, 28 (11), pp.947-948. 10.1016/j.tim.2020.06.001. hal-02993754 HAL Id: hal-02993754 https://hal.archives-ouvertes.fr/hal-02993754 Submitted on 7 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Magnetospirillum gryphiswaldense Dirk Schüler1, Caroline L. Monteil2,3 & Christopher T. Lefevre2,* 1Dept. of Microbiology, University of Bayreuth, Bayreuth, Germany 2CNRS, CEA, Aix-Marseille Université, UMR7265 Biosciences and Biotechnologies Institute of Aix-Marseille, Saint Paul lez Durance, France 3Sorbonne Université, UMR CNRS7590, Muséum National d'Histoire Naturelle, IRD, Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie, Paris, France *Correspondence: [email protected] Keywords: magnetotaxis, magnetosome, biomineralization, magnetite 1 Summary Magnetospirillum gryphiswaldense is amongst the best studied representatives of magnetotactic bacteria. These microbes use the Earth’s magnetic field for navigation thanks to unique organelles, the magnetosomes, which are membrane-enveloped, iron-rich magnetic particles. Because it can be grown in the lab relatively easily and is genetically tractable, M. gryphiswaldense has been subject of many studies on magnetotaxis, organelle biosynthesis and biomineralization in prokaryotes and used for environmental and medical applications. -
Genomic Expansion of Magnetotactic Bacteria Reveals an Early Common Origin of Magnetotaxis with Lineage-Specific Evolution
The ISME Journal (2018) 12:1508–1519 https://doi.org/10.1038/s41396-018-0098-9 ARTICLE Genomic expansion of magnetotactic bacteria reveals an early common origin of magnetotaxis with lineage-specific evolution 1,2,3 1,2,3,4 5 5 1,2,6 Wei Lin ● Wensi Zhang ● Xiang Zhao ● Andrew P. Roberts ● Greig A. Paterson ● 7 1,2,3,4 Dennis A. Bazylinski ● Yongxin Pan Received: 4 October 2017 / Revised: 23 February 2018 / Accepted: 26 February 2018 / Published online: 26 March 2018 © The Author(s) 2018. This article is published with open access Abstract The origin and evolution of magnetoreception, which in diverse prokaryotes and protozoa is known as magnetotaxis and enables these microorganisms to detect Earth’smagneticfield for orientation and navigation, is not well understood in evolutionary biology. The only known prokaryotes capable of sensing the geomagnetic field are magnetotactic bacteria (MTB), motile microorganisms that biomineralize intracellular, membrane-bounded magnetic single-domain crystals of either magnetite (Fe3O4)orgreigite(Fe3S4) called magnetosomes. Magnetosomes are responsible for magnetotaxis in MTB. Here we report the first large-scale metagenomic survey of MTB from both northern and southern hemispheres combined with 28 1234567890();,: genomes from uncultivated MTB. These genomes expand greatly the coverage of MTB in the Proteobacteria, Nitrospirae,and Omnitrophica phyla, and provide the first genomic evidence of MTB belonging to the Zetaproteobacteria and “Candidatus Lambdaproteobacteria” classes. The gene content and organization of magnetosome gene clusters, which are physically grouped genes that encode proteins for magnetosome biosynthesis and organization, are more conserved within phylogenetically similar groups than between different taxonomic lineages. -
A Bacterial Cytolinker Couples Positioning of Magnetic Organelles to Cell Shape Control
A bacterial cytolinker couples positioning of magnetic organelles to cell shape control Daniel Pfeiffera,1, Mauricio Toro-Nahuelpana,b,2, Ram Prasad Awala, Frank-Dietrich Müllera, Marc Bramkampc, Jürgen M. Plitzkob, and Dirk Schülera aDepartment of Microbiology, University Bayreuth, 95447 Bayreuth, Germany; bDepartment of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152 Planegg-Martinsried, Germany; and cInstitute for General Microbiology, Christian-Albrechts-University, 24118 Kiel, Germany Edited by David A. Weitz, Harvard University, Cambridge, MA, and approved October 26, 2020 (received for review July 14, 2020) Magnetotactic bacteria maneuver within the geomagnetic field by axis), thus aligning the magnetosome chain to the motility axis means of intracellular magnetic organelles, magnetosomes, which are within a helical cell (8). aligned into a chain and positioned at midcell by a dedicated Recent observations indicate that all determinants for mag- magnetosome-specific cytoskeleton, the “magnetoskeleton.” How- netosome chain formation and positioning [MamJ, MamK, and ever, how magnetosome chain organization and resulting magneto- MamY; altogether the “magnetoskeleton” (8)] are in fact re- taxis is linked to cell shape has remained elusive. Here, we describe quired for efficient navigation within the geomagnetic field (9). the cytoskeletal determinant CcfM (curvature-inducing coiled-coil fil- Magnetotaxis was further shown to enhance navigation through ament interacting with the magnetoskeleton), which links the mag- porous media (10), resembling the compact and dense natural netoskeleton to cell morphology regulation in Magnetospirillum habitats of MTB, such as muddy aquatic sediments. In non- gryphiswaldense. Membrane-anchored CcfM localizes in a filamen- MTB, a curved cell shape is important for efficient motility in tous pattern along regions of inner positive-cell curvature by its related structured and highly viscous environments (11–14) by coiled-coil motifs, and independent of the magnetoskeleton.