Sudden Motility Reversal Indicates Sensing of Magnetic Field Gradients in Magnetospirillum Magneticum AMB-1 Strain

Total Page:16

File Type:pdf, Size:1020Kb

Sudden Motility Reversal Indicates Sensing of Magnetic Field Gradients in Magnetospirillum Magneticum AMB-1 Strain The ISME Journal (2015) 9, 1399–1409 & 2015 International Society for Microbial Ecology All rights reserved 1751-7362/15 www.nature.com/ismej ORIGINAL ARTICLE Sudden motility reversal indicates sensing of magnetic field gradients in Magnetospirillum magneticum AMB-1 strain Lina M Gonza´lez1, Warren C Ruder2, Aaron P Mitchell3, William C Messner1,4 and Philip R LeDuc1 1Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA; 2Department of Biological Systems Engineering, Virginia Tech, Blacksburg, VA, USA; 3Department of Biological Science, Carnegie Mellon University, Pittsburgh, PA, USA and 4Department of Mechanical Engineering, Tufts University, Medford, MA, USA Many motile unicellular organisms have evolved specialized behaviors for detecting and responding to environmental cues such as chemical gradients (chemotaxis) and oxygen gradients (aerotaxis). Magnetotaxis is found in magnetotactic bacteria and it is defined as the passive alignment of these cells to the geomagnetic field along with active swimming. Herein we show that Magnetospirillum magneticum (AMB-1) show a unique set of responses that indicates they sense and respond not only to the direction of magnetic fields by aligning and swimming, but also to changes in the magnetic field or magnetic field gradients. We present data showing that AMB-1 cells exhibit sudden motility reversals when we impose them to local magnetic field gradients. Our system employs permalloy (Ni80Fe20) islands to curve and diverge the magnetic field lines emanating from our custom-designed Helmholtz coils in the vicinity of the islands (creating a drop in the field across the islands). The three distinct movements we have observed as they approach the permalloy islands are: unidirectional, single reverse and double reverse. Our findings indicate that these reverse movements occur in response to magnetic field gradients. In addition, using a permanent magnet we found further evidence that supports this claim. Motile AMB-1 cells swim away from the north and south poles of a permanent magnet when the magnet is positioned less than B30 mm from the droplet of cells. All together, these results indicate previously unknown response capabilities arising from the magnetic sensing systems of AMB-1 cells. These responses could enable them to cope with magnetic disturbances that could in turn potentially inhibit their efficient search for nutrients. The ISME Journal (2015) 9, 1399–1409; doi:10.1038/ismej.2014.224; published online 5 December 2014 Introduction pigeons. Among other eukaryotic organisms in which magnetite has been experimentally found Diverse organisms can sense and respond to the are fish (Mann et al., 1988; Diebel et al., 2000) and Earth’s magnetic field. This ability is dependent termites (Maher 1998). All of these organisms upon the intracellular biomineralization of presumably use this mineral as a ‘compass’ to sense magnetic particles and the formation of organic magnetic fields when navigating and homing. compartments or vesicles; this magnetic field sen- Certain unicellular microorganisms such as sing behavior can be found in a diversity of magnetotactic bacteria (MTB) have the ability to organisms (Lowenstam, 1981). For example, Gould synthesize chains of mineral crystals (Ruder et al., et al. (1978) discovered that honeybees contain 2012), each of which is enveloped by individual magnetite localized in their abdomen, and Walcott lipid bilayers in organelles known as magnetosomes and colleagues (Walcott, 1977; Walcott et al., 1979) (Frankel et al., 1979). These magnetosome inclu- discovered magnetite in the head of homing sions render these creatures a model organism to study compartmentalization in prokaryotes Correspondence: P LeDuc, Department of Mechanical Engineering, (Komeili, 2012), and the formation mechanisms of Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA these structurally organized magnetosomes under 15213, USA or W Messner, Department of Mechanical Engineering, genetic control have been elucidated (Komeili et al., Tufts University, 204 Anderson Hall, Medford, MA 02155, USA. E-mail: [email protected] or [email protected] 2004, 2006; Scheffel et al., 2006). According to Received 6 May 2014; revised 14 September 2014; accepted 23 previous studies the proposed mechanisms of the October 2014; published online 5 December 2014 assembly of magnetosomes are: (1) the magnetosome Reversal indicates sensing of magnetic gradients LM Gonza´lez et al 1400 compartment invaginates from the inner cell mem- In this paper, we have found sudden motility brane (Komeili et al., 2004); (2) individual magneto- reversals (Figure 1a) exhibited by the Magneto- somes are recruited to the actin-like protein, MamK spirillum magneticum (AMB-1) that are related to (Komeili et al., 2006; Katzmann et al., 2010) magnetic field gradients. We proposed that these (providing a structural scaffold), where an acidic organisms may utilize these reversals to respond to protein, MamJ (Scheffel et al., 2006), (running along magnetic disturbances. the cell, from pole to pole), attaches them to this cytoskeleton filaments in a beads-on-a-string man- ner; (3) ferric ions are chelated by siderophores and Materials and methods transported into these cells; and (4) magnetite crystallization ensues within the nucleated vesicles. Helmholtz coils There is a plethora of information about magneto- In order to examine the interaction of AMB-1 cells, somes and the proteins involved in their formation we custom built a pair of Helmholtz coils that processes. However, there is no study showing produced an area with a uniform magnetic field evidence of the ability of magnetotactic bacteria to (Gonza´lez et al., 2014) . This system consisted of two cope with magnetic disturbances or fluctuations identical coils separated by the radius of the coils. (that is, gradients) in their surrounding environ- The radius of the coil was 4.5 inch and the gauge of ments that can misguide them, pull them and the magnet wire used was 22 AWG. For this pair of inhibit their efficient search for nutrients. Investiga- Helmholtz coils, there were 400 turns in each coil, tion of the swimming behavior in the presence of and the windings were stacked in 7 layers. For the magnetic field gradients could shed light on a U-turn experiments, we used another larger pair of possible defense mechanism that these organisms Helmholtz coils with a radius of 13 inch with 150 could have adopted under physiological stress in turns in each coil and the magnet wire gage used their natural environment or in the laboratory was 18 AWG. An Arduino Uno microcontroller was setting to impart a protection against self-magnetics. used to rapidly alternate the stimulation between Figure 1 Observed reversals in magnetotactic bacteria in the vicinity of magnetic islands indicate magnetic field gradient sensing. (a) Schematic of the three observed modes of motility, UM, SRM and DRM, for AMB-1 approaching NiFe islands. Bright-field microscopy images of a time sequence of the motility path of representative AMB-1 approaching the magnetic islands and exhibiting (b) single- reverse and (c) double-reverse responses (scale bar, 5 mm). The ISME Journal Reversal indicates sensing of magnetic gradients LM Gonza´lez et al 1401 the two coils to do the U-turn experiments. A circuit field lines, but the ability of these bacteria to switch with a transistor (TIP102) and diode (1N4004) was directions in response to local magnetic field built to protect the electrical circuitry of the gradients has not been explored. Sudden motility Arduino microcontroller as the maximum current reversals in axial magnetotactic bacteria have been the Arduino can take is B30 mA and we needed previously observed in response to oxygen gradients over 0.1 A˚ to drive the coils. In the circuitry, in a mechanism known as magneto-aerotaxis, we included light-emitting diodes (LEDs) to because it is a ‘magnetically assisted aerotaxis’ indicate which coils were operating at each (Frankel et al., 1997). In this study, we imposed time (Supplementary Figure S1 shows the coil sharp concentrated magnetic field gradients using B arrangement and the circuit used to control thin film permalloy (Ni80Fe20) island ( 30 nm in both coils). height) to concentrate magnetic fields generated through our custom-designed Helmholtz coils that produced a uniform magnetic field (Gonza´lez et al., Permalloy island fabrication 2014). We exposed AMB-1 cells to magnetic field Permalloy islands (Figures 1b and c) were fabricated gradients as they approached and crossed the star- and then magnetized using the previously described shaped islands. They experienced a change in the Helmholtz coils. To visualize the interaction of the magnetic field from high to low and back to high AMB-1 cells with these islands, we used a  63 again. The bacteria were observed to exhibit three objective on a modified inverted microscope (Zeiss distinct behavior modes, unidirectional movement Anxiovert 200, Go¨ttingen, Germany). The permalloy (UM), single-reverse movement (SRM) and double- islands and the microscope slide thickness was reverse movement (DRM), as shown in Figure 1a. o170 mm for visualization. To make the permalloy The UM mode was characterized by continued, island master mold, we used an image reversal straight-line movement with only very slight devia- fabrication process (Long and Newman, 1984). The tions from the straight path in one direction as the ensuing master was used as the mold to
Recommended publications
  • Physiological Characteristics of Magnetospirillum Gryphiswaldense
    www.nature.com/scientificreports OPEN Physiological characteristics of Magnetospirillum gryphiswaldense MSR-1 that control cell growth Received: 18 October 2016 Accepted: 21 April 2017 under high-iron and low-oxygen Published: xx xx xxxx conditions Qing Wang1,5, Xu Wang1,5, Weijia Zhang2,5, Xianyu Li3, Yuan Zhou1, Dan Li1, Yinjia Wang4, Jiesheng Tian1,5, Wei Jiang1,5, Ziding Zhang 1, Youliang Peng1, Lei Wang4, Ying Li1,5 & Jilun Li1,5 Magnetosome formation by Magnetospirillum gryphiswaldense MSR-1 is dependent on iron and oxygen levels. We used transcriptome to evaluate transcriptional profiles of magnetic and non-magnetic MSR-1 cells cultured under high-iron and low-iron conditions. A total of 80 differentially expressed genes (DEGs) were identified, including 53 upregulated and 27 downregulated under high-iron condition. These DEGs belonged to the functional categories of biological regulation, oxidation-reduction process, and ion binding and transport, and were involved in sulfur metabolism and cysteine/methionine metabolism. Comparison with our previous results from transcriptome data under oxygen-controlled conditions indicated that transcription of mam or mms was not regulated by oxygen or iron signals. 17 common DEGs in iron- and oxygen-transcriptomes were involved in energy production, iron transport, and iron metabolism. Some unknown-function DEGs participate in iron transport and metabolism, and some are potential biomarkers for identification ofMagnetospirillum strains. IrrA and IrrB regulate iron transport in response to low-oxygen and high-iron signals, respectively. Six transcription factors were predicted to regulate DEGs. Fur and Crp particularly co-regulate DEGs in response to changes in iron or oxygen levels, in a proposed joint regulatory network of DEGs.
    [Show full text]
  • Magnetotactic Bacteria and Their Application in Medicine
    Chem cal ist si ry y & h P B f i o o Dasdag and Bektas. J Phys Chem Biophys 2014, 4:2 p l h a Journal of Physical Chemistry & y n s r DOI: 10.4172/2161-0398.1000141 i u c o s J ISSN: 2161-0398 Biophysics ResearchReview Article Article OpenOpen Access Access Magnetotactic Bacteria and their Application in Medicine Suleyman Dasdag1* and Hava Bektas2 1Department of Biophysics, Medical School of Dicle University, Diyarbakir, Turkey 2Department of Biophysics, Medical School of Yuzuncu Yil University, Van / Turkey Abstract It is a known fact how the magnetic field of the Earth is very important for life. Relation between living systems and the earth magnetic field has been investigated for many years. Birds and their migration routes are the first one of the things that comes to mind when we state living things. The Earth’s magnetic field is still accepted to be the main factor for birds and other flying living beings to complete their travels correctly. The changes in migration routes, which are observed from time to time, are sometimes said to be due to the changes in the magnetic field. However, no light has been shed to this matter yet. The Earth’s magnetic field has not been sufficiently studied, and its role on small living models such as bacteria has not been adequately discussed. One of the best examples in this field is relation between the Earth’s magnetic field and “magnetotactic bacteria (MTB)”, which were discovered by Salvatore Bellini in 1963. Currently, it is claimed that magnetotactic bacteria have a widespread use in microbiology, mineralogy, limnology, physics, biophysics, chemistry, biochemistry, geology, crystallography, and astrobiology.
    [Show full text]
  • Magnetospirillum Gryphiswaldense
    Mechanism and regulation of magnetosomal iron uptake and biomineralization in Magnetospirillum gryphiswaldense Dissertation der Fakultät für Biologie der Ludwig-Maximilians-Universität München vorgelegt von René Uebe aus Stralsund München 19.12.2011 II Gutachter: 1. Prof. Dr. Dirk Schüler 2. Prof. Dr. Heinrich Jung Tag der mündlichen Prüfung: 02.05.12 III IV Publications and manuscripts originating from this thesis CHAPTER 2 Uebe, R., Voigt, B., Schweder, T., Albrecht, D., Katzmann, E., Lang, C., Böttger, L., Matzanke, B. and Schüler, D. (2010). Deletion of a fur-like gene affects iron homeostasis and magnetosome formation in Magnetospirillum gryphiswaldense. J. Bacteriol. 192: 4192-4204. CHAPTER 3 Uebe, R., Junge, K., Henn, V., Poxleitner, G., Katzmann, E., Plitzko, J. M., Zarivach, R., Kasama, T., Wanner, G., Pósfai, M., Böttger, L., Matzanke, B. and Schüler, D. (2011). The cation diffusion facilitator proteins MamB and MamM of Magnetospirillum gryphiswaldense have distinct and complex functions, and are involved in magnetite biomineralization and magnetosome membrane assembly. Mol. Microbiol. 82: 818-835. CHAPTER 4 Uebe, R., Henn, V. and Schüler, D. (2012). The MagA protein of magnetospirilla is not involved in bacterial magnetite biomineralization. J. Bacteriol. 194: 1018-1023 V VI INDEX INDEX PUBLICATIONS AND MANUSCRIPTS ORIGINATING FROM THIS THESIS......................V INDEX.................................................................................................................................................VII ABBREVIATIONS
    [Show full text]
  • Design and Fabrication of Nonconventional Optical Components by Precision Glass Molding
    Design and Fabrication of Nonconventional Optical Components by Precision Glass Molding DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Peng He Graduate Program in Industrial and Systems Engineering The Ohio State University 2014 Dissertation Committee: Dr. Allen Y. Yi, Advisor Dr. Jose M. Castro Dr. L. James Lee Copyright by Peng He 2014 Abstract Precision glass molding is a net-shaping process to fabricate glass optics by replicating optical features from precision molds to glass at elevated temperature. The advantages of precision glass molding over traditional glass lens fabrication methods make it especially suitable for the production of optical components with complicated geometries, such as aspherical lenses, diffractive hybrid lenses, microlens arrays, etc. Despite of these advantages, a number of problems must be solved before this process can be used in industrial applications. The primary goal of this research is to determine the feasibility and performance of nonconventional optical components formed by precision glass molding. This research aimed to investigate glass molding by combing experiments and finite element method (FEM) based numerical simulations. The first step was to develop an integrated compensation solution for both surface deviation and refractive index drop of glass optics. An FEM simulation based on Tool-Narayanaswamy-Moynihan (TNM) model was applied to predict index drop of the molded optical glass. The predicted index value was then used to compensate for the optical design of the lens. Using commercially available general purpose software, ABAQUS, the entire process of glass molding was simulated to calculate the surface deviation from the adjusted lens geometry, which was applied to final mold shape modification.
    [Show full text]
  • Mixotrophic Magnetosome-Dependent Magnetoautotrophic Metabolism of Model Magnetototactic Bacterium Magnetospirillum Magneticum A
    Mixotrophic Magnetosome-Dependent Magnetoautotrophic Metabolism of Model Magnetototactic Bacterium Magnetospirillum magneticum AMB-1 Dissertation Presented In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Eric Keith Mumper, BA Graduate Program in the School of Earth Sciences The Ohio State University 2019 Dissertation Committee: Steven K. Lower, Adviser Brian H. Lower Ratnasingham Sooryakumar Ann E. Cook Copyright by Eric Keith Mumper 2019 Abstract Magnetospirillum magneticum AMB-1 is a member of a phylogenetically diverse group of bacteria characterized by their ability to biomineralize magnetic minerals known collectively as magnetotactic bacteria (MTB).1,2,3 MTB produce chains of membrane- bound intracellular magnetic nanocrystals, collectively known as magnetosomes.1,2,3 The current scientific consensus is that magnetosomes are used by MTB to orient themselves in vertically stratified water columns in order to achieve optimal oxygen concentrations in a process known as magnetoaerotaxis.4,5 Biomineralization of magnetosomes is an energy intensive process which accounts for roughly 33% of the cell's metabolic budget.6 This high metabolic cost seems to contradict with the amount of time MTB cells spend aligned with external magnetic fields.5 Due to this apparent discrepancy, I examined the potential role the magnetosome may play in bacterial metabolism. Through analysis of comparative growth on a variety of media compositions both magnetic, wild type and non-magnetic, mutant strains of AMB-1, I discovered that cells grown under stress conditions exhibit an inversion of growth dynamics which indicates some advantage for magnetic cells. Non-magnetic, mutant cells display a direct relationship between external magnetic field strength and growth, indicating magnetic field dependence.
    [Show full text]
  • Set Name Card Description Sketch Auto
    Set Name Card Description Sketch Auto Mem #'d Odds Point Base Set 1 Angela 4 Per Pack 24 Base Set 2 Anti-Venom 4 Per Pack 24 Base Set 3 Doc Samson 4 Per Pack 24 Base Set 4 Attuma 4 Per Pack 24 Base Set 5 Bedlam 4 Per Pack 24 Base Set 6 Black Knight 4 Per Pack 24 Base Set 7 Black Panther 4 Per Pack 24 Base Set 8 Black Swan 4 Per Pack 24 Base Set 9 Blade 4 Per Pack 24 Base Set 10 Blink 4 Per Pack 24 Base Set 11 Callisto 4 Per Pack 24 Base Set 12 Cannonball 4 Per Pack 24 Base Set 13 Captain Universe 4 Per Pack 24 Base Set 14 Challenger 4 Per Pack 24 Base Set 15 Punisher 4 Per Pack 24 Base Set 16 Dark Beast 4 Per Pack 24 Base Set 17 Darkhawk 4 Per Pack 24 Base Set 18 Collector 4 Per Pack 24 Base Set 19 Devil Dinosaur 4 Per Pack 24 Base Set 20 Ares 4 Per Pack 24 Base Set 21 Ego The Living Planet 4 Per Pack 24 Base Set 22 Elsa Bloodstone 4 Per Pack 24 Base Set 23 Eros 4 Per Pack 24 Base Set 24 Fantomex 4 Per Pack 24 Base Set 25 Firestar 4 Per Pack 24 Base Set 26 Ghost 4 Per Pack 24 Base Set 27 Ghost Rider 4 Per Pack 24 Base Set 28 Gladiator 4 Per Pack 24 Base Set 29 Goblin Knight 4 Per Pack 24 Base Set 30 Grandmaster 4 Per Pack 24 Base Set 31 Hazmat 4 Per Pack 24 Base Set 32 Hercules 4 Per Pack 24 Base Set 33 Hulk 4 Per Pack 24 Base Set 34 Hyperion 4 Per Pack 24 Base Set 35 Ikari 4 Per Pack 24 Base Set 36 Ikaris 4 Per Pack 24 Base Set 37 In-Betweener 4 Per Pack 24 Base Set 38 Khonshu 4 Per Pack 24 Base Set 39 Korvus 4 Per Pack 24 Base Set 40 Lady Bullseye 4 Per Pack 24 Base Set 41 Lash 4 Per Pack 24 Base Set 42 Legion 4 Per Pack 24 Base Set 43 Living Lightning 4 Per Pack 24 Base Set 44 Maestro 4 Per Pack 24 Base Set 45 Magus 4 Per Pack 24 Base Set 46 Malekith 4 Per Pack 24 Base Set 47 Manifold 4 Per Pack 24 Base Set 48 Master Mold 4 Per Pack 24 Base Set 49 Metalhead 4 Per Pack 24 Base Set 50 M.O.D.O.K.
    [Show full text]
  • Tooling & Molds User Guide
    TOOLING & MOLDS USER GUIDE WHERE GREAT IDEAS TAKE SHAPE www.generalplastics.com IMPORTANT: BEFORE YOU START, TEST YOUR MATERIALS Select the material you plan to use for testing, and then test the tooling material under the expected process conditions to ensure it is suitable and stable. This is recommended to ensure good tooling performance, and it should be performed as part of your process before you commit to a larger program. All General Plastics material products are manufactured in the United States and are free of CFCs and VOCs. Customer Service and Product Experts 1-800-806-6051 or 1-253-473-5000 Monday-Friday 6:30am-5pm, Pacific Time LAST-A-FOAM® products mentioned in this guide include: FR-3700, FR-4500, FR-4700, FR-4800, and FR-7100. INTRODUCTION TO THE USER GUIDE General Plastics Mtg. Co. prepared this guide to assist you Our knowledgeable customer service team and product with recommendations, general guidelines and a reference experts are ready and available to answer questions you to address common applications using the LAST-A-FOAM® may have and to help you attain the best possible results high-density, rigid polyurethane foam product line. using our products. We can provide recommendations on product selection, design, use, and testing services or Here you will find information on material properties and product literature. performance, application considerations, and helpful tips and resources when using our products. Specific to this guide are the FR-7100 Multi-Use Core and Modeling Board Series, the FR-4800 High Temperature Tooling Board, the FR-4700 High-Temperature Tooling Board Series, the FR-4500 Tooling Board Series, and the FR-3700 Performance Core Series.
    [Show full text]
  • Institution Spons Agency Available from Abstract
    DOCUMENT RESUME ED 422 492 CE 077 015 TITLE Mold Making Series. Educational Resources for the Machine Tool Industry. Course Syllabi, Instructor's Handbook, [and] Student Laboratory Manual. INSTITUTION Texas State Technical Coll. System, Waco. SPONS AGENCY Office of Vocational and Adult Education (ED), Washington, DC.; National Science Foundation, Arlington, VA. Div. of Undergraduate Education. PUB DATE 1998-00-00 NOTE 1508p.; For related documents, see ED 401 431-445 and CE 077 005-017. Product of the MASTER (Machine Tool Advanced Skills Technology Educational Resources) Consortium. CONTRACT DUE-9553716 AVAILABLE FROM Online at http://machinetool.tstc.edu PUB TYPE Guides - Classroom - Learner (051)-- Guides Classroom - Teacher (052) EDRS PRICE MF12/PC61 Plus Postage. DESCRIPTORS Behavioral Objectives; Competence; *Competency Based Education; Computer Assisted Design; *Computer Assisted Manufacturing; Consortia; Curriculum Design; Curriculum Guides; Employment Qualifications; Entry Workers; Equipment Utilization; Job Skills; Learning Activities; Learning Modules; *Machine Tool Operators; Machine Tools; Manufacturing Industry; Numerical Control; Postsecondary Education; *Production Technicians; *Technical Education; Vocational Education IDENTIFIERS DACUM Process; *Moldmaking ABSTRACT This package consists of a course syllabi, an instructor's handbook, and a student laboratory manual for a 2-year vocational training program to prepare students for entry-level employment as mold makers.The program was developed through a modification of the
    [Show full text]
  • Uncanny Xmen Box
    Official Advanced Game Adventure CAMPAIGN BOOK TABLE OF CONTENTS What Are Mutants? ....... .................... ...2 Creating Mutant Groups . ..... ................ ..46 Why Are Mutants? .............................2 The Crime-Fighting Group . ... ............. .. .46 Where Are Mutants? . ........ ........ .........3 The Tr aining Group . ..........................47 Mutant Histories . ................... ... ... ..... .4 The Government Group ............. ....... .48 The X-Men ..... ... ... ............ .... ... 4 Evil Mutants ........................... ......50 X-Factor . .......... ........ .............. 8 The Legendary Group ... ........... ..... ... 50 The New Mutants ..... ........... ... .........10 The Protective Group .......... ................51 Fallen Angels ................ ......... ... ..12 Non-Mutant Groups ... ... ... ............. ..51 X-Terminators . ... .... ............ .........12 Undercover Groups . .... ............... .......51 Excalibur ...... ..............................12 The False Oppressors ........... .......... 51 Morlocks ............... ...... ......... .....12 The Competition . ............... .............51 Original Brotherhood of Evil Mutants ..... .........13 Freedom Fighters & Te rrorists . ......... .......52 The Savage Land Mutates ........ ............ ..13 The Mutant Campaign ... ........ .... ... .........53 Mutant Force & The Resistants ... ......... ......14 The Mutant Index ...... .... ....... .... 53 The Second Brotherhood of Evil Mutants & Freedom Bring on the Bad Guys ... .......
    [Show full text]
  • Magnetospirillum Gryphiswaldense Dirk Schüler, Caroline Monteil, Christopher Lefèvre
    Magnetospirillum gryphiswaldense Dirk Schüler, Caroline Monteil, Christopher Lefèvre To cite this version: Dirk Schüler, Caroline Monteil, Christopher Lefèvre. Magnetospirillum gryphiswaldense. Trends in Microbiology, Elsevier, 2020, 28 (11), pp.947-948. 10.1016/j.tim.2020.06.001. hal-02993754 HAL Id: hal-02993754 https://hal.archives-ouvertes.fr/hal-02993754 Submitted on 7 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Magnetospirillum gryphiswaldense Dirk Schüler1, Caroline L. Monteil2,3 & Christopher T. Lefevre2,* 1Dept. of Microbiology, University of Bayreuth, Bayreuth, Germany 2CNRS, CEA, Aix-Marseille Université, UMR7265 Biosciences and Biotechnologies Institute of Aix-Marseille, Saint Paul lez Durance, France 3Sorbonne Université, UMR CNRS7590, Muséum National d'Histoire Naturelle, IRD, Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie, Paris, France *Correspondence: [email protected] Keywords: magnetotaxis, magnetosome, biomineralization, magnetite 1 Summary Magnetospirillum gryphiswaldense is amongst the best studied representatives of magnetotactic bacteria. These microbes use the Earth’s magnetic field for navigation thanks to unique organelles, the magnetosomes, which are membrane-enveloped, iron-rich magnetic particles. Because it can be grown in the lab relatively easily and is genetically tractable, M. gryphiswaldense has been subject of many studies on magnetotaxis, organelle biosynthesis and biomineralization in prokaryotes and used for environmental and medical applications.
    [Show full text]
  • Genomic Expansion of Magnetotactic Bacteria Reveals an Early Common Origin of Magnetotaxis with Lineage-Specific Evolution
    The ISME Journal (2018) 12:1508–1519 https://doi.org/10.1038/s41396-018-0098-9 ARTICLE Genomic expansion of magnetotactic bacteria reveals an early common origin of magnetotaxis with lineage-specific evolution 1,2,3 1,2,3,4 5 5 1,2,6 Wei Lin ● Wensi Zhang ● Xiang Zhao ● Andrew P. Roberts ● Greig A. Paterson ● 7 1,2,3,4 Dennis A. Bazylinski ● Yongxin Pan Received: 4 October 2017 / Revised: 23 February 2018 / Accepted: 26 February 2018 / Published online: 26 March 2018 © The Author(s) 2018. This article is published with open access Abstract The origin and evolution of magnetoreception, which in diverse prokaryotes and protozoa is known as magnetotaxis and enables these microorganisms to detect Earth’smagneticfield for orientation and navigation, is not well understood in evolutionary biology. The only known prokaryotes capable of sensing the geomagnetic field are magnetotactic bacteria (MTB), motile microorganisms that biomineralize intracellular, membrane-bounded magnetic single-domain crystals of either magnetite (Fe3O4)orgreigite(Fe3S4) called magnetosomes. Magnetosomes are responsible for magnetotaxis in MTB. Here we report the first large-scale metagenomic survey of MTB from both northern and southern hemispheres combined with 28 1234567890();,: genomes from uncultivated MTB. These genomes expand greatly the coverage of MTB in the Proteobacteria, Nitrospirae,and Omnitrophica phyla, and provide the first genomic evidence of MTB belonging to the Zetaproteobacteria and “Candidatus Lambdaproteobacteria” classes. The gene content and organization of magnetosome gene clusters, which are physically grouped genes that encode proteins for magnetosome biosynthesis and organization, are more conserved within phylogenetically similar groups than between different taxonomic lineages.
    [Show full text]
  • A Bacterial Cytolinker Couples Positioning of Magnetic Organelles to Cell Shape Control
    A bacterial cytolinker couples positioning of magnetic organelles to cell shape control Daniel Pfeiffera,1, Mauricio Toro-Nahuelpana,b,2, Ram Prasad Awala, Frank-Dietrich Müllera, Marc Bramkampc, Jürgen M. Plitzkob, and Dirk Schülera aDepartment of Microbiology, University Bayreuth, 95447 Bayreuth, Germany; bDepartment of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152 Planegg-Martinsried, Germany; and cInstitute for General Microbiology, Christian-Albrechts-University, 24118 Kiel, Germany Edited by David A. Weitz, Harvard University, Cambridge, MA, and approved October 26, 2020 (received for review July 14, 2020) Magnetotactic bacteria maneuver within the geomagnetic field by axis), thus aligning the magnetosome chain to the motility axis means of intracellular magnetic organelles, magnetosomes, which are within a helical cell (8). aligned into a chain and positioned at midcell by a dedicated Recent observations indicate that all determinants for mag- magnetosome-specific cytoskeleton, the “magnetoskeleton.” How- netosome chain formation and positioning [MamJ, MamK, and ever, how magnetosome chain organization and resulting magneto- MamY; altogether the “magnetoskeleton” (8)] are in fact re- taxis is linked to cell shape has remained elusive. Here, we describe quired for efficient navigation within the geomagnetic field (9). the cytoskeletal determinant CcfM (curvature-inducing coiled-coil fil- Magnetotaxis was further shown to enhance navigation through ament interacting with the magnetoskeleton), which links the mag- porous media (10), resembling the compact and dense natural netoskeleton to cell morphology regulation in Magnetospirillum habitats of MTB, such as muddy aquatic sediments. In non- gryphiswaldense. Membrane-anchored CcfM localizes in a filamen- MTB, a curved cell shape is important for efficient motility in tous pattern along regions of inner positive-cell curvature by its related structured and highly viscous environments (11–14) by coiled-coil motifs, and independent of the magnetoskeleton.
    [Show full text]