Two New Species of Aphelenchoididae (Nemata) from Declining Red Pines in Maryland 1
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Description of Seinura Italiensis N. Sp.(Tylenchomorpha
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-018 e2020-18 | Vol. 52 Description of Seinura italiensis n. sp. (Tylenchomorpha: Aphelenchoididae) found in the medium soil imported from Italy Jianfeng Gu1,*, Munawar Maria2, 1 3 Lele Liu and Majid Pedram Abstract 1Technical Centre of Ningbo Seinura italiensis n. sp. isolated from the medium soil imported from Customs (Ningbo Inspection and Italy is described and illustrated using morphological and molecular Quarantine Science Technology data. The new species is characterized by having short body (477 Academy), No. 8 Huikang, Ningbo, (407-565) µm and 522 (469-590) µm for males and females, respec- 315100, Zhejiang, P.R. China. tively), three lateral lines, stylet lacking swellings at the base, and ex- 2Laboratory of Plant Nematology, cretory pore at the base or slightly anterior to base of metacorpus; Institute of Biotechnology, College females have 58.8 (51.1-69.3) µm long post-uterine sac (PUS), elon- of Agriculture and Biotechnology, gate conical tail with its anterior half conoid, dorsally convex, and Zhejiang University, Hangzhou, ventrally slightly concave and the posterior half elongated, narrower, 310058, Zhejiang, P.R. China. with finely rounded to pointed tip and males having seven caudal papillae and 14.1 (12.6-15.0) µm long spicules. Morphologically, the 3Department of Plant Pathology, new species is similar to S. caverna, S. chertkovi, S. christiei, S. hyr- Faculty of Agriculture, Tarbiat cania, S. longicaudata, S. persica, S. steineri, and S. tenuicaudata. Modares University, Tehran, Iran. The differences of the new species with aforementioned species are *E-mail: [email protected] discussed. -
Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves
Journal of Nematology 48(1):28–33. 2016. Ó The Society of Nematologists 2016. Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves 1 1 1 2 LYNN K. CARTA, SHIGUANG LI, ANDREA M. SKANTAR, AND GEORGE NEWCOMBE Abstract: During a long-term, large network study of the ecology of plant endophytes in native habitats, various nematodes have been found. Two poplar species, Populus angustifolia (narrowleaf cottonwood) and Populus trichocarpa (black cottonwood), are important ecological and genomic models now used in ongoing plant–pathogen–endophyte interaction studies. In this study, two different aphe- lenchid nematodes within surface-sterilized healthy leaves of these two Populus spp. in northwestern North America were discovered. Nematodes were identified and characterized microscopically and molecularly with 28S ribosomal RNA (rRNA) and 18S rRNA molecular markers. From P. angustifolia, Aphelenchoides saprophilus was inferred to be closest to another population of A. saprophilus among sequenced taxa in the 18S tree. From P. trichocarpa, Laimaphelenchus heidelbergi had a 28S sequence only 1 bp different from that of a Portuguese population, and 1 bp different from the original Australian type population. The 28S and 18S rRNA trees of Aphelenchoides and Laima- phelenchus species indicated L. heidelbergi failed to cluster with three other Laimaphelenchus species, including the type species of the genus. Therefore, we support a conservative definition of the genus Laimaphelenchus, and consider these populations to belong to Aphelenchoides, amended as Aphelenchoides heidelbergi n. comb. This is the first report of these nematode species from within aboveground leaves. The presence of these fungal-feeding nematodes can affect the balance of endophytic fungi, which are important determinants of plant health. -
PCR-RFLP and Sequencing Analysis of Ribosomal DNA of Bursaphelenchus Nematodes Related to Pine Wilt Disease(L)
Fundam. appl. Nemalol., 1998,21 (6), 655-666 PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease(l) Hideaki IvVAHORI, Kaku TSUDA, Natsumi KANZAKl, Katsura IZUI and Kazuyoshi FUTAI Cmduate School ofAgriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan. Accepted for publication 23 December 1997. Summary -A polymerase chain reaction - restriction fragment polymorphism (PCR-RFLP) analysis was used for the discri mination of isolates of Bursaphelenchus nematode. The isolares of B. xylophilus examined originared from Japan, the United Stares, China, and Canada and the B. mucronatus isolates from Japan, China, and France. Ribosomal DNA containing the 5.8S gene, the internai transcribed spacer region 1 and 2, and partial regions of 18S and 28S gene were amplified by PCR. Digestion of the amplified products of each nematode isolate with twelve restriction endonucleases and examination of resulting RFLP data by cluster analysis revealed a significant gap between B. xylophllus and B. mucronatus. Among the B. xylophilus isolares examined, Japanese pathogenic, Chinese and US isolates were ail identical, whereas Japanese non-pathogenic isolares were slightly distinct and Canadian isolates formed a separate cluster. Among the B. mucronalUS isolates, two Japanese isolares were very similar to each other and another Japanèse and one Chinese isolare were identical to each other. The DNA sequence data revealed 98 differences (nucleotide substitutions or gaps) in 884 bp investigated between B. xylophilus isolare and B. mucronmus isolate; DNA sequence data of Aphelenchus avenae and Aphelenchoides fragariae differed not only from those of Bursaphelenchus nematodes, but also from each other. -
Transcriptome Profiling of the Root-Knot Nematode Meloidogyne Enterolobii During Parasitism and Identification of Novel Effector Proteins
Ecole Doctorale de Sciences de la Vie et de la Santé Unité de recherche : UMR ISA INRA 1355-UNS-CNRS 7254 Thèse de doctorat Présentée en vue de l’obtention du grade de docteur en Biologie Moléculaire et Cellulaire de L’UNIVERSITE COTE D’AZUR par NGUYEN Chinh Nghia Etude de la régulation du transcriptome de nématodes parasites de plante, les nématodes à galles du genre Meloidogyne Dirigée par Dr. Bruno FAVERY Soutenance le 8 Décembre, 2016 Devant le jury composé de : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis Président Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Rapporteur Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Rapporteur Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinateur Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis Directeur de thèse Doctoral School of Life and Health Sciences Research Unity: UMR ISA INRA 1355-UNS-CNRS 7254 PhD thesis Presented and defensed to obtain Doctor degree in Molecular and Cellular Biology from COTE D’AZUR UNIVERITY by NGUYEN Chinh Nghia Comprehensive Transcriptome Profiling of Root-knot Nematodes during Plant Infection and Characterisation of Species Specific Trait PhD directed by Dr Bruno FAVERY Defense on December 8th 2016 Jury composition : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis President Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Reporter Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Reporter Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinator Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis PhD Director Résumé Les nématodes à galles du genre Meloidogyne spp. -
Prioritising Plant-Parasitic Nematode Species Biosecurity Risks Using Self Organising Maps
Prioritising plant-parasitic nematode species biosecurity risks using self organising maps Sunil K. Singh, Dean R. Paini, Gavin J. Ash & Mike Hodda Biological Invasions ISSN 1387-3547 Volume 16 Number 7 Biol Invasions (2014) 16:1515-1530 DOI 10.1007/s10530-013-0588-7 1 23 Your article is protected by copyright and all rights are held exclusively by Springer Science +Business Media Dordrecht. This e-offprint is for personal use only and shall not be self- archived in electronic repositories. If you wish to self-archive your article, please use the accepted manuscript version for posting on your own website. You may further deposit the accepted manuscript version in any repository, provided it is only made publicly available 12 months after official publication or later and provided acknowledgement is given to the original source of publication and a link is inserted to the published article on Springer's website. The link must be accompanied by the following text: "The final publication is available at link.springer.com”. 1 23 Author's personal copy Biol Invasions (2014) 16:1515–1530 DOI 10.1007/s10530-013-0588-7 ORIGINAL PAPER Prioritising plant-parasitic nematode species biosecurity risks using self organising maps Sunil K. Singh • Dean R. Paini • Gavin J. Ash • Mike Hodda Received: 25 June 2013 / Accepted: 12 November 2013 / Published online: 17 November 2013 Ó Springer Science+Business Media Dordrecht 2013 Abstract The biosecurity risks from many plant- North and Central America, Europe and the Pacific parasitic nematode (PPN) species are poorly known with very similar PPN assemblages to Australia as a and remain a major challenge for identifying poten- whole. -
Nematoda: Aphelenchoididae) from Declining Chinese Pine, Pinus Tabuliformis in Beijing, China
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-019 e2020-19 | Vol. 52 Description of Laimaphelenchus sinensis n. sp. (Nematoda: Aphelenchoididae) from declining Chinese pine, Pinus tabuliformis in Beijing, China Jianfeng Gu1,*, Munawar Maria2, Yiwu Fang1, Lele Liu1, Yong Bian3 and Xianfeng Chen1,* Abstract 1Technical Centre of Ningbo Laimaphelenchus sinensis n. sp. isolated from declining Chinese Customs (Ningbo Inspection and pine, Pinus tabuliformis Carrière, is described and characterized Quarantine Science Technology morphologically and molecularly. The new species has four incisures Academy), Huikang No. 8, Ningbo in the lateral field and the excretory pore situated posterior to the 315100, Zhejiang, P.R. China. nerve ring; the female has a vulval flap and vaginal sclerotization is quite prominent in majority of specimens. The female tail is 2Laboratory of Plant Nematology, conoid, ventrally curved having a single stalk-like terminus with Institute of Biotechnology, College 8 to 10 projections. The male spicules are 14.0 (13.2-15) μ m long of Agriculture & Biotechnology, along curved median line and tail is ventrally curved typical of the Zhejiang University, Hangzhou genus; however, the projections are less prominent as compared 310058, Zhejiang, P.R. China. to those of female. The male has two pairs of caudal papillae and 3Technical Centre of Beijing Bursa is absent. Phylogenetically, the ribosomal DNA sequences Customs, No. 6 Tianshuiyuan of the new species placed it within Laimaphelenchus clade and are Street, Chaoyang District, morphologically similar to L. persicus, L. preissii, L. simlaensis and Beijing 100026, P.R. China. L. unituberculus. *E-mails: [email protected]; [email protected] Keywords Laimaphelenchus, Chinese pine, n. -
Aphelenchoides Fragariae
AUG11Pathogen of the month - August 2011 a b c d e Fig. 1. Leaf blotch symptoms on ferns (a), Aphelenchoides fragariae (b), tight aggregation of strawberry crown with malformed leaves (c); tail with blunt spike (d), heavily infested strawberry plant (left) adjacent to asymptomatic plant. Photo credits L. Forsberg (a) and W. O’Neill (b, c, d, e). Common Name: Bud and Leaf Nematode Classification: K: Animalia, P: Nematoda, C: Secernentea, O: Tylenchida, F: Aphelenchoididae Aphelenchoides fragariae is a foliar nematode which has an extensive host range and is widely distributed through the tropical and temperate zones around the world. It is a frequently encountered and economically damaging pest in the foliage plant and nursery industries. As its name suggests, A. fragariae is also a major pest of strawberries worldwide. It has recently been detected in Australian strawberry crops, causing some major losses, whereas historically A. besseyi has caused problems in the Australian industry. This nematode should not be confused with A. ritzemabosi, another bud and leaf nematode that occurs mainly in chrysanthemum, or A. besseyi which causes “crimp disease” in strawberries. (Ritzema Bos, 1890) Christie, 1932 Lifecycle: A. fragariae is an obligate parasite of above On ferns, typical leaf blotch occurs in chevron-like stripes, as ground parts of plants. On strawberries, the nematode is movement seems to be delimited by veins. Leaf blotch symptoms ectoparasitic living in the folded crown and runner buds of on flowering plants appear as water soaked patches which later the plant, with feeding taking place in the folded bud stage. turn brown. A. -
Seasonal Stabilities of Soil Nematode Communities and Their Relationships with Environmental Factors in Different Temperate Forest Types on the Chinese Loess Plateau
Article Seasonal Stabilities of Soil Nematode Communities and Their Relationships with Environmental Factors in Different Temperate Forest Types on the Chinese Loess Plateau Na Huo 1, Shiwei Zhao 1,2,3,*, Jinghua Huang 2,3, Dezhou Geng 1, Nan Wang 1 and Panpan Yang 3 1 College of Natural Resources and Environment, Northwest A&F University, Yangling 712100, China; [email protected] (N.H.); [email protected] (D.G.); [email protected] (N.W.) 2 State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling 712100, China; [email protected] 3 Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling 712100, China; [email protected] * Correspondence: [email protected] Abstract: The bottom-up effects of vegetation have been documented to be strong drivers of the soil food web structure and functioning in temperate forests. However, how the forest type affects the stability of the soil food web is not well known. In the Ziwuling forest region of the Loess Plateau, we selected three typical forests, Pinus tabuliformis Carrière (PT), Betula platyphylla Sukaczev (BP), and Quercus liaotungensis Koidz. (QL), to investigate the soil nematode community characteristics in the dry (April) and rainy (August) season, and analyzed their relationships with the soil properties. The results showed that the characteristics of the soil nematode communities and their seasonal variations Citation: Huo, N.; Zhao, S.; Huang, differed markedly among the forest types. Compared to P. tabuliformis (PT), the B. platyphylla (BP) and J.; Geng, D.; Wang, N.; Yang, P. -
Generic Pest Risk Analysis: Import of Transgenic Rice
GENERIC PEST RISK ANALYSIS: IMPORT OF TRANSGENIC RICE Editors Baleshwar Singh Kavita Gupta Z Khan Shashi Bhalla V Celia Chalam SC Dubey National Bureau of Plant Genetic Resources New Delhi 110 012, INDIA 1 Citation: Singh Baleshwar, Kavita Gupta, Z Khan, Shashi Bhalla, V Celia Chalam and S C Dubey (Eds) (2016) Generic Pest Risk Analysis: Import of Transgenic Rice. ICAR-National Bureau of Plant Genetic Resources, New Delhi, India, 33p. Published in 2016 © All Rights Reserved ICAR-National Bureau of Plant Genetic Resources, New Delhi 110012, India Published by: The Director, ICAR-National Bureau of Plant Genetic Resources, New Delhi 110012, India. Email: [email protected] Website: http://www.nbpgr.ernet.in 2 Contents Pages Introduction 4 Table 1. Potential Quarantine Pests of Rice for India 8 References 27 Glossary 30 Acronyms and Abbreviations 31 Useful websites 33 3 Introduction Rice (Oryza sativa L.) is one of the world's most important cereals food crop in tropical and subtropical regions of the world for human consumption. Major Rice growing countries include India, China, Bangladesh, Thailand, Myanmar, Philippines, Japan, Pakistan, USA, Indonesia, Korea and Vietnam. India and China produce 50% of rice in the world. Rice cultivation has grown up to 158 ha out of which 90% production is being carried out in developing countries. China tops the list of top 10 rice producing nations with a production of 144,560 million tons and India in the second spot as the country produces 104,800 million tons during February 2016 (https://www.worldriceproduction.com/). Yield enhancement to increase rice production is one of the essential strategies to meet the demand for food of the growing population. -
JOURNAL of NEMATOLOGY First Record of Aphelenchoides
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2019-070 e2019-70 | Vol. 51 First record of Aphelenchoides stammeri (Nematoda: Aphelenchoididae) from Turkey Mehmet Dayi,1* Ece B. Kasapoğlu Uludamar,2 Süleyman Akbulut3 and Abstract 2 İ. Halil Elekcioğlu In previous surveys for the investigation of Bursaphelenchus 1Forestry Vocational School, xylophilus in Turkey, several Bursaphelenchus species, except Düzce University, Düzce, Turkey. B. xylophilus, were detected. To determine the insect vectors of 2 these previously reported Bursaphelenchus species, trap trees of Department of Plant Protection, each pine species (Pinus brutia and P. nigra) were cut and kept in Faculty of Agriculture, Çukurova the field from April to September in 2011.Aphelenchoides stammeri University, Adana, Turkey. was isolated from wood chip samples of P. nigra from Isparta 3Department of Forest Engineering, (Sütçüler). A. stammeri was first identified by using morphological Faculty of Forestry, İzmir Katip features and allometric criteria of females and males. In addition, Çelebi University, İzmir, Turkey. molecular analysis using sequences of 18S and 28S ribosomal (rRNA) genes of A. stammeri was performed. This is the first report *E-mail: [email protected] of A. stammeri from Turkey. This paper was edited by Eyualem Abebe. Keywords Received for publication April 4, Pinus, Survey, Vector, Aphelenchoides stammeri, Detection, Morphology, 2019. Diagnosis. Pine wilt disease, caused by the pinewood nem- been periodically carried out in different geographical atode, Bursaphelenchus xylophilus (Steiner and regions of Turkey since 2003. Buhrer, 1934; Nickle, 1970) (Nematoda: Parasitaph- In 2011, a new project was started to collect the elenchidae), has been leading to extensive damage possible insect vectors of Bursaphelenchus Fuchs in pine forests of eastern Asia (Webster, 1999). -
Supplemental Description of Paraphelenchus Acontioides
Nematology, 2011, Vol. 13(8), 887-899 Supplemental description of Paraphelenchus acontioides (Tylenchida: Aphelenchidae, Paraphelenchinae), with ribosomal DNA trees and a morphometric compendium of female Paraphelenchus ∗ Lynn K. CARTA 1, , Andrea M. SKANTAR 1, Zafar A. HANDOO 1 and Melissa A. BAYNES 2 1 United States Department of Agriculture, ARS-BARC, Nematology Laboratory, Beltsville, MD 20705, USA 2 Department of Forest Ecology and Biogeosciences, University of Idaho, Moscow, ID 83844, USA Received: 30 September 2010; revised: 7 February 2011 Accepted for publication: 7 February 2011; available online: 5 April 2011 Summary – Nematodes were isolated from surface-sterilised stems of cheatgrass, Bromus tectorum (Poaceae), in Colorado, grown on Fusarium (Hypocreaceae) fungus culture, and identified as Paraphelenchus acontioides. Morphometrics and micrographic morphology of this species are given to supplement the original description and expand the comparative species diagnosis. A tabular morphometric compendium of the females of the 23 species of Paraphelenchus is provided as the last diagnostic compilation was in 1984. Variations in the oviduct within the genus are reviewed to evaluate the taxonomic assignment of P. d e cke r i , a morphologically transitional species between Aphelenchus and Paraphelenchus. Sequences were generated for both 18S and 28S ribosomal DNA, representing the first identified species within Paraphelenchus so characterised. These sequences were incorporated into phylogenetic trees with related species of Aphelenchidae and Tylenchidae. Aphelenchus avenae isolates formed a well supported monophyletic sister group to Paraphelenchus. The ecology of Paraphelenchus, cheat grass and Fusarium is also discussed. Keywords – fungivorous nematode, invasive species, key, morphology, molecular, phylogeny, taxonomy. Nematodes of the genus Paraphelenchus Micoletzky, P. -
E PLANTAS: Fundamentos E Importância
NEMATOLOGIA DE PLANTAS: fundamentos e importância ii NEMATOLOGIA DE PLANTAS: fundamentos e importância Organizado por Luiz Carlos C. Barbosa Ferraz Docente aposentado da Escola Superior de Agricultura Luiz de Queiroz, Universidade de São Paulo, Piracicaba, Brasil Derek John F inlay Brown Pesquisador aposentado do Scottish Crop Research Institute (SCRI), atual James Hutton Institute, Dundee, Escócia uma publicação da iii Sociedade Brasileira de Nematologia / SBN Sede atual: Universidade Estadual do Norte Fluminense Darcy Ribeiro / CCTA. Av. Alberto Lamego, 2000 – Parque California 28013-602 – Campos dos Goytacazes (RJ) – Brasil E-mail: [email protected] Telefone: (22) 3012-4821 Site: http://nematologia.com.br © Sociedade Brasileira de Nematologia 2016. Todos os direitos reservados. É vedada a reprodução desta publicação, ou de suas partes, na forma impressa ou por outros meios, sem prévia autorização do representante legal da SBN. A sua utilização poderá vir a ocorrer estritamente para fins didáticos, em caráter eventual e com a citação da fonte. Ficha catalográfica elaborada por Marilene de Sena e Silva - CRB/AM Nº 561 F368 n FERRAZ, L.C.C.B.; BROWN, D.J.F. Nematologia de plantas: fundamentos e importância. L.C.C.B. Ferraz e D.J.F. Brown (Orgs.). Manaus: NORMA EDITORA, 2016. 251 p. Il. ISBN: 978-85-99031-26-1 2. Nematologia. 2. Doenças de plantas. 3. Vermes. I. Ferraz & Brown. II. Título. CDD: 632 iv Para Maria Teresa, Alex e Thais, que souberam entender a minha irresistível atração pela Nematologia e aceitar as muitas horas de plena dedicação a ela. In memoriam Alexandre M. Cintra Goulart, Anário Jaehn, Dimitry Tihohod, José Julio da Ponte, Luiz G.