Low Level of Genetic Divergence Between Harpagifer Fish Species (Perciformes: Notothenioidei) Suggests a Quaternary Colonization
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Jan Jansen, Dipl.-Biol
The spatial, temporal and structural distribution of Antarctic seafloor biodiversity by Jan Jansen, Dipl.-Biol. Under the supervision of Craig R. Johnson Nicole A. Hill Piers K. Dunstan and John McKinlay Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Quantitative Antarctic Science Institute for Marine and Antarctic Studies (IMAS), University of Tasmania May 2019 In loving memory of my dad, whose passion for adventure, sport and all of nature’s life and diversity inspired so many kids, including me, whose positive and generous attitude touched so many people’s lives, and whose love for the ocean has carried over to me. The spatial, temporal and structural distribution of Antarctic seafloor biodiversity by Jan Jansen Abstract Biodiversity is nature’s most valuable resource. The Southern Ocean contains significant levels of marine biodiversity as a result of its isolated history and a combination of exceptional environmental conditions. However, little is known about the spatial and temporal distribution of biodiversity on the Antarctic continental shelf, hindering informed marine spatial planning, policy development underpinning regulation of human activity, and predicting the response of Antarctic marine ecosystems to environmental change. In this thesis, I provide detailed insight into the spatial and temporal distribution of Antarctic benthic macrofaunal and demersal fish biodiversity. Using data from the George V shelf region in East Antarctica, I address some of the main issues currently hindering understanding of the functioning of the Antarctic ecosystem and the distribution of biodiversity at the seafloor. The focus is on spatial biodiversity prediction with particular consideration given to previously unavailable environmental factors that are integral in determining where species are able to live, and the poor relationships often found between species distributions and other environmental factors. -
Age-Length Composition of Mackerel Icefish (Champsocephalus Gunnari, Perciformes, Notothenioidei, Channichthyidae) from Different Parts of the South Georgia Shelf
CCAMLR Scieilce, Vol. 8 (2001): 133-146 AGE-LENGTH COMPOSITION OF MACKEREL ICEFISH (CHAMPSOCEPHALUS GUNNARI, PERCIFORMES, NOTOTHENIOIDEI, CHANNICHTHYIDAE) FROM DIFFERENT PARTS OF THE SOUTH GEORGIA SHELF G.A. Frolkina AtlantNIRO 5 Dmitry Donskoy Street Kaliningrad 236000, Russia Email - atlantQbaltnet.ru Abstract Biostatistical data obtained by Soviet research and commercial vessels from 1970 to 1991 have been used to determine tlne age-length composition of mackerel icefish (Chnnzpsoceplzalus g~~izllnrl)from different parts of the South Georgia area. An analysis of the spatial distribution of C. giirzrznri size and age groups over the eastern, northern, western and soutlnern parts of tlne shelf, and near Shag Rocks, revealed a similar age-leingtl~composition for young fish inhabiting areas to the west of the island and near Shag Rocks. Differences were observed between those t~7ogroups and the easterin group. The larger number of mature fish in the west is related to the migration of maturing individuals from the eastern and western parts of the area. It is implied that part of tlne western group migrates towards Shag Rocks at the age of 2-3 years. It has been found that, by number, recruits represent the largest part of tlne population, whether a fishery is operating or not. As a result of this, as well as the species' ability to live not only in off- bottom, but also in pelagic waters, an earlier age of sexual maturity compared to other nototheniids, and favourable oceanographic conditions, the C. g~lrliznrl stock could potentially recover quickly from declines in stock size and inay become abundant in the area, as has bee11 demonstrated on several occasions in the 1970s and 1980s. -
Climate Change Direct Effects on Antarctic Fish and Indirect Effects on Ecosystems and Fisheries Management
PCAS 15 (2012/2013) Supervised Project Report (ANTA604) Climate change direct effects on Antarctic fish and indirect effects on ecosystems and fisheries management Beth Vanderhaven Student ID:42236339 Word count:4816 Abstract/executive summary (ca. 200 words): Climate change has direct effects on the physiology of Antarctic fish. These polar fish, predominantly from Notothenioidei, are well adapted for the stable, cold environmental conditions of the Southern Ocean. Physiological adaptations include antifreeze glycogen proteins (AFGP) and a narrow tolerance to temperature change. Climate change does not impact evenly around Antarctica, in areas of warming there are predicted negative effects on fish stock and survivability, habitats and indirectly ecosystems. In turn fisheries and their management must also take into account the direct impacts on the Antarctic fish they harvest. This critical review identifies specific areas of weakness of fish species, habitats and the Antarctic marine ecosystem. Whilst also identifying current fisheries issues that need to be addressed due to the direct influences on the Antarctic fish. Table of contents Introduction ……….………………………………………………………………………………………………page 3 Climate change………….…………………………………………………………………………………….…page 3-4 Antarctic fish…………………………………………………………………………………………………...…page 4-6 Direct effects on fish…………………………….………………………………………………………..….page 6-7 Ecosystem effects……………………………………………..………..…………………………..………...page 7-8 Management and Fisheries……….…………………………………………………………………….….page 8 Discussion and Conclusion…………………………………………………………………………………..page 9-10 References…………………………………………..…………………………………………..………………...page 10-13 Page nos. 1-13 Word count. 4816 Introduction Fisheries in the Southern Ocean are the longest continuous human activity in Antarctica and have had the greatest effect on the ecosystem up to this point (Croxall & Nicol, 2004). Now we are seeing the effects climate change is having on its ecosystem and fish, identifying it now as the current and future threat to them. -
Mitochondrial DNA, Morphology, and the Phylogenetic Relationships of Antarctic Icefishes
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 28 (2003) 87–98 www.elsevier.com/locate/ympev Mitochondrial DNA, morphology, and the phylogenetic relationships of Antarctic icefishes (Notothenioidei: Channichthyidae) Thomas J. Near,a,* James J. Pesavento,b and Chi-Hing C. Chengb a Center for Population Biology, One Shields Avenue, University of California, Davis, CA 95616, USA b Department of Animal Biology, 515 Morrill Hall, University of Illinois, Urbana, IL 61801, USA Received 10 July 2002; revised 4 November 2002 Abstract The Channichthyidae is a lineage of 16 species in the Notothenioidei, a clade of fishes that dominate Antarctic near-shore marine ecosystems with respect to both diversity and biomass. Among four published studies investigating channichthyid phylogeny, no two have produced the same tree topology, and no published study has investigated the degree of phylogenetic incongruence be- tween existing molecular and morphological datasets. In this investigation we present an analysis of channichthyid phylogeny using complete gene sequences from two mitochondrial genes (ND2 and 16S) sampled from all recognized species in the clade. In addition, we have scored all 58 unique morphological characters used in three previous analyses of channichthyid phylogenetic relationships. Data partitions were analyzed separately to assess the amount of phylogenetic resolution provided by each dataset, and phylogenetic incongruence among data partitions was investigated using incongruence length difference (ILD) tests. We utilized a parsimony- based version of the Shimodaira–Hasegawa test to determine if alternative tree topologies are significantly different from trees resulting from maximum parsimony analysis of the combined partition dataset. Our results demonstrate that the greatest phylo- genetic resolution is achieved when all molecular and morphological data partitions are combined into a single maximum parsimony analysis. -
Of RV Upolarsternu in 1998 Edited by Wolf E. Arntz And
The Expedition ANTARKTIS W3(EASIZ 11) of RV uPolarsternuin 1998 Edited by Wolf E. Arntz and Julian Gutt with contributions of the participants Ber. Polarforsch. 301 (1999) ISSN 0176 - 5027 Contents 1 Page INTRODUCTION........................................................................................................... 1 Objectives of the Cruise ................................................................................................l Summary Review of Results .........................................................................................2 Itinerary .....................................................................................................................10 Meteorological Conditions .........................................................................................12 RESULTS ...................................................................................................................15 Benthic Resilience: Effect of Iceberg Scouring On Benthos and Fish .........................15 Study On Benthic Resilience of the Macro- and Megabenthos by Imaging Methods .............................................................................................17 Effects of Iceberg Scouring On the Fish Community and the Role of Trematomus spp as Predator on the Benthic Community in Early Successional Stages ...............22 Effect of Iceberg Scouring on the Infauna and other Macrobenthos ..........................26 Begin of a Long-Term Experiment of Benthic Colonisation and Succession On the High Antarctic -
Ancient Climate Change, Antifreeze, and the Evolutionary Diversification of Antarctic Fishes
Ancient climate change, antifreeze, and the evolutionary diversification of Antarctic fishes Thomas J. Neara,b,1, Alex Dornburgb, Kristen L. Kuhnb, Joseph T. Eastmanc, Jillian N. Penningtonb,d, Tomaso Patarnelloe, Lorenzo Zanef, Daniel A. Fernándezg, and Christopher D. Jonesh aPeabody Museum of Natural History and bDepartment of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520 cDepartment of Biomedical Sciences, College of Osteopathic Medicine, Ohio University, Athens, OH 45701; dEzra Stiles College, Yale University, New Haven, CT 06520 eDepartment of Public Health, Comparative Pathology and Veterinary Hygiene, Università di Padova, 35020 Legnaro, Italy; fDepartment of Biology, Università di Padova, 35131 Padua, Italy; gCentro Austral de Investigaciones Científicas, 9410 Ushuaia, Argentina; and hAntarctic Ecosystem Research Division, Southwest Fisheries Science Center, National Oceanic and Atmospheric Administration National Marine Fisheries Service, La Jolla, CA 92037 Edited by David M. Hillis, University of Texas, Austin, TX, and approved January 25, 2012 (received for review September 15, 2011) The Southern Ocean around Antarctica is among the most rapidly they are more species-rich than their non-Antarctic sister line- warming regions on Earth, but has experienced episodic climate age (approximately 100 vs. one species) (9). Molecular di- change during the past 40 million years. It remains unclear how vergence time analyses have attempted to correlate the origin of ancient periods of climate change have shaped Antarctic bio- the AFGP-bearing Antarctic notothenioids with a period of diversity. The origin of antifreeze glycoproteins (AFGPs) in Ant- global cooling and widespread glaciation of Antarctica that be- arctic notothenioid fishes has become a classic example of how the gan at the onset of the Eocene–Oligocene boundary (14, 15), evolution of a key innovation in response to climate change can approximately 35 Ma (16, 17), leading to the conclusion that the drive adaptive radiation. -
Mitochondrial Phylogeny of Trematomid Fishes (Nototheniidae, Perciformes) and the Evolution of Antarctic Fish
MOLECULAR PHYLOGENETICS AND EVOLUTION Vol. 5, No. 2, April, pp. 383±390, 1996 ARTICLE NO. 0033 Mitochondrial Phylogeny of Trematomid Fishes (Nototheniidae, Perciformes) and the Evolution of Antarctic Fish PETER A. RITCHIE,²,*,1,2 LUCA BARGELLONI,*,³ AXEL MEYER,*,§ JOHN A. TAYLOR,² JOHN A. MACDONALD,² AND DAVID M. LAMBERT²,2 ²School of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand; *Department of Ecology and Evolution and §Program in Genetics, State University of New York, Stony Brook, New York 11794-5245; and ³Dipartimento di Biologia, Universita di Padova, Via Trieste 75, 35121 Padua, Italy Received November 22, 1994; revised June 2, 1995 there is evidence that this may have occurred about The subfamily of ®shes Trematominae is endemic to 12±14 million years ago (MYA) (Eastman, 1993; the subzero waters of Antarctica and is part of the Bargelloni et al., 1994). larger notothenioid radiation. Partial mitochondrial There may have been a suite of factors which allowed sequences from the 12S and 16S ribosomal RNA (rRNA) the notothenioids, in particular, to evolve to such domi- genes and a phylogeny for 10 trematomid species are nance in the Southern Oceans. Several authors have presented. As has been previously suggested, two taxa, suggested that speciation within the group could have Trematomus scotti and T. newnesi, do not appear to be been the result of large-scale disruptions in the Antarc- part of the main trematomid radiation. The genus Pa- tic ecosystem during the Miocene (Clarke, 1983). The gothenia is nested within the genus Trematomus and isostatic pressure from the accumulation of ice during has evolved a unique cyropelagic existence, an associ- the early Miocene (25±15 MYA) left the continental ation with pack ice. -
Adaptations and Lifestyle in Polar Marine Environments: a Biological Challenge for the Study of Fish Evolution
Adaptations and lifestyle in polar marine environments: a biological challenge for the study of fi sh evolution Cinzia Verde, Ennio Cocca, Donatella de Pascale, Elio Parisi & Guido di Prisco The climatic features of Antarctic waters are more extreme and constant than in the Arctic. The Antarctic has been isolated and cold longer than the Arctic. The polar ichthyofaunas differ in age, endemism, taxonomy, zoogeographic distinctiveness and physiological tolerance to environmen- tal parameters. The Arctic is the connection between the Antarctic and the temperate–tropical systems. Paradigmatic comparisons of the path- ways of adaptive evolution of fi sh from both poles address the oxygen- transport system and the antifreezes of northern and southern species. (i) Haemoglobin evolution has included adaptations at the biochemical, physiological and molecular levels. Within the study of the molecular bases of fi sh cold adaptation, and taking advantage of the information on haemoglobin amino acid sequence, we analysed the evolutionary history of the α and β globins of Antarctic, Arctic and temperate haemoglobins as a basis for reconstructing phylogenetic relationships. In the trees, the constant physico-chemical conditions of the Antarctic waters are matched by clear grouping of globin sequences, whereas the variability typical of the Arctic ecosystem corresponds to high sequence variation, refl ected by scattered intermediate positions between the Antarctic and non-Ant- arctic clades. (ii) Antifreeze (glyco)proteins and peptides allow polar fi sh to survive at sub-zero temperatures. In Antarctic Notothenioidei the anti- freeze gene evolved from a trypsinogen-like serine protease gene. In the Arctic polar cod the genome contains genes which encode nearly identi- cal proteins, but have evolved from a different genomic locus—a case of convergent evolution. -
The Hemoglobins of Sub-Antarctic Fishes of the Suborder Notothenioidei
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Available online at www.sciencedirect.com Polar Science 4 (2010) 295e308 http://ees.elsevier.com/polar/ The hemoglobins of sub-Antarctic fishes of the suborder Notothenioidei Daniela Coppola a, Daniela Giordano a, Alessandro Vergara b, Lelio Mazzarella b, Guido di Prisco a, Cinzia Verde a, Roberta Russo a,* a Institute of Protein Biochemistry, CNR, Via Pietro Castellino 111, I-80131 Naples, Italy b Department of Chemistry, University of Naples ‘Federico II’, Complesso Universitario Monte S. Angelo, Via Cinthia, I-80126 Naples, Italy Received 16 December 2009; revised 19 April 2010; accepted 19 April 2010 Available online 12 May 2010 Abstract Fishes of the perciform suborder Notothenioidei provide an excellent opportunity for studying the evolution and functional importance of evolutionary adaptations to temperature. To understand the unique biochemical features of high-Antarctic noto- thenioids, it is important to improve our knowledge of these highly cold-adapted stenotherms with new information on their sub- Antarctic relatives. This paper focuses on the oxygen-transport system of two non-Antarctic species, Eleginops maclovinus and Bovichtus diac- anthus. Unlike most Antarctic notothenioids, the blood of E. maclovinus and B. diacanthus displays high hemoglobin (Hb) multiplicity. E. maclovinus, the sister group of Antarctic notothenioids, has one cathodal (Hb C) and two anodal components (Hb 1, Hb 2). B. diacanthus, one of the most northern notothenioids, has three major Hbs. The multiple Hbs may have been maintained as a response to temperature differences and fluctuations of temperate waters, much larger than in the Antarctic. -
The Two Giant Sister Species of the Southern Ocean, Dissostichus
Polar Biol DOI 10.1007/s00300-006-0222-6 ORIGINAL PAPER The two giant sister species of the Southern Ocean, Dissostichus eleginoides and Dissostichus mawsoni, diVer in karyotype and chromosomal pattern of ribosomal RNA genes L. Ghigliotti · F. Mazzei · C. Ozouf-Costaz · C. Bonillo · R. Williams · C.-H. C. Cheng · E. Pisano Received: 5 July 2006 / Revised: 27 September 2006 / Accepted: 28 September 2006 © Springer-Verlag 2006 Abstract The two giant notothenioid species, the ping to its additional submetacentric chromosome. The Patagonian toothWsh Dissostichus eleginoides and the additional rRNA genes in D. mawsoni may be a cold- Antarctic toothWsh D. mawsoni, are important com- adaptive compensatory mechanism for growth and ponents of the Antarctic ichthyofauna and heavily development of this large species in freezing seawater. exploited commercially. They have similar appear- ance and size, both are piscivorous and bentho- Keywords Antarctica · Chromosomes · Dissostichus · pelagic, but diVer in their geographic distribution and Ribosomal genes · ToothWsh absence/presence of the antifreeze trait. We karyo- typed these two sister species by analyzing specimens collected from multiple Antarctic and sub-Antarctic Introduction sites. Both species have a diploid number of 48, but diVer in karyotypic formula, (2m + 2sm + 44a) for D. The two species of toothWsh, the Patagonian toothWsh, eleginoides and (2m + 4sm + 42a) for D. mawsoni, Dissostichus eleginoides Smitt 1898, and the Antarctic due to an extra pair of submetacentric chromosomes toothWsh, D. mawsoni Norman 1937, are important in the latter. Chromosomal Xuorescence in situ components of the Southern Ocean ichthyofauna (Gon hybridization with rDNA probes revealed unex- and Heemstra 1990). They are similar in appearance, pected species-speciWc organization of rRNA genes; body size (»100 kg), piscivory and bentho-pelagic life D. -
2008-2009 Field Season Report Chapter 9 Antarctic Marine Living Resources Program NOAA-TM-NMFS-SWFSC-445
2008-2009 Field Season Report Chapter 9 Antarctic Marine Living Resources Program NOAA-TM-NMFS-SWFSC-445 Demersal Finfi sh Survey of the South Orkney Islands Christopher Jones, Malte Damerau, Kim Deitrich, Ryan Driscoll, Karl-Hermann Kock, Kristen Kuhn, Jon Moore, Tina Morgan, Tom Near, Jillian Pennington, and Susanne Schöling Abstract A random, depth-stratifi ed bottom trawl survey of the South Orkney Islands (CCAMLR Subarea 48.2) fi nfi sh populations was completed as part of Leg II of the 2008/09 AMLR Survey. Data collection included abundance, spatial distribution, species and size composition, demographic structure and diet composition of fi nfi sh species within the 500 m isobath of the South Orkney Islands. Additional slope stations were sampled off the shelf of the South Orkney Islands and in the northern Antarctic Peninsula region (Subarea 48.1). During the 2008/09 AMLR Survey: • Seventy-fi ve stations were completed on the South Orkney Island shelf and slope area (63-764 m); • Th ree stations were completed on the northern Antarctic Peninsula slope (623-759 m); • A total of 7,693 kg (31,844 individuals) was processed from 65 fi nfi sh species; • Spatial distribution of standardized fi nfi sh densities demonstrated substantial contrast across the South Orkney Islands shelf area; • Th e highest densities of pooled fi nfi sh biomass occurred on the northwest shelf of the South Orkney Islands, at sta- tions north of Inaccessible and Coronation Islands, and the highest mean densities occurred within the 150-250 m depth stratum; • Th e greatest species diversity of fi nfi sh occurred at deeper stations on the southern shelf region; • Additional data collection of environmental and ecological features of the South Orkney Islands was conducted in order to further investigate Antarctic fi nfi sh in an ecosystem context. -
Environmental Contamination in Antarctic Ecosystems
SCIENCE OF THE TOTAL ENVIRONMENT 400 (2008) 212– 226 available at www.sciencedirect.com www.elsevier.com/locate/scitotenv Environmental contamination in Antarctic ecosystems R. Bargagli⁎ University of Siena, Department of Environmental Sciences, Via P.A. Mattioli, 4; 53100 Siena (Italy) ARTICLE INFO ABSTRACT Article history: Although the remote continent of Antarctica is perceived as the symbol of the last great Received 9 April 2008 wilderness, the human presence in the Southern Ocean and the continent began in the early Received in revised form 1900s for hunting, fishing and exploration, and many invasive plant and animal species 27 June 2008 have been deliberately introduced in several sub-Antarctic islands. Over the last 50 years, Accepted 27 June 2008 the development of research and tourism have locally affected terrestrial and marine Available online 2 September 2008 coastal ecosystems through fuel combustion (for transportation and energy production), accidental oil spills, waste incineration and sewage. Although natural “barriers” such as Keywords: oceanic and atmospheric circulation protect Antarctica from lower latitude water and air Antarctica masses, available data on concentrations of metals, pesticides and other persistent Southern Ocean pollutants in air, snow, mosses, lichens and marine organisms show that most persistent Trace metals contaminants in the Antarctic environment are transported from other continents in the POPs Southern Hemisphere. At present, levels of most contaminants in Antarctic organisms are Pathways lower than those in related species from other remote regions, except for the natural Deposition trends accumulation of Cd and Hg in several marine organisms and especially in albatrosses and petrels. The concentrations of organic pollutants in the eggs of an opportunistic top predator such as the south polar skua are close to those that may cause adverse health effects.