Reproducibility and Replicability in Science (2019)
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Case 1:20-Cv-00323-LY Document 49-2 Filed 04/02/20 Page 1 of 34
Case 1:20-cv-00323-LY Document 49-2 Filed 04/02/20 Page 1 of 34 EXHIBIT 12 Case 1:20-cv-00323-LY Document 49-2 Filed 04/02/20 Page 2 of 34 IN THE UNITED STATES DISTRICT COURT FOR THE WESTERN DISTRICT OF TEXAS AUSTIN DIVISION PLANNED PARENTHOOD CENTER FOR CHOICE, et al., Plaintiffs, v. No. 1:20-cv-00323-LY GREG ABBOTT, in his official capacity as Governor of Texas, et al., Defendants. DECLARATION OF MARY TRAVIS BASSETT, M.D., M.P.H., IN SUPPORT OF PLAINTIFFS’ MOTION FOR PRELIMINARY INJUNCTION I, Mary Travis Bassett, M.D., M.P.H. declare as follows: 1. I am the Director of the François-Xavier Bagnoud (“FXB”) Center for Health and Human Rights at Harvard University, as well as the FXB Professor of the Practice of Health and Human Rights at the Harvard T.H. Chan School of Public Health. I am offering this declaration on my own behalf and not on that of Harvard University or other professional organizations that are noted. 2. I served as Commissioner of the New York City Department of Health and Mental Hygiene (DOHMH) from 2014–2018 and led New York’s response to the Ebola pandemic. I also led DOHMH as the City responded to a large outbreak of Legionnaires’ disease and the Zika outbreak in South America and the Caribbean. Previously, I had been the Program Director for the African Health Initiative and the Child Well-Being Program at the Doris Duke Charitable Foundation (2009–2014). Prior to that, I served as Deputy Commissioner of Health Promotion and Disease Prevention, for the New York City Department of Health and Mental Hygiene (2002– 2009). -
Professor Peter Piot Joins the Board of Biocon Biologics Limited As an Independent Director
PRESS RELEASE Professor Peter Piot Joins the Board of Biocon Biologics Limited as an Independent Director Bengaluru, India; January 21, 2021: Biocon Biologics Ltd., a fully integrated ‘pure play’ biosimilars company and a subsidiary of Biocon Ltd. (BSE code: 532523, NSE: BIOCON), announced today that it has inducted Professor Peter Piot to its Board as an Independent Director. Professor Piot, MD, PhD is the Director of the London School of Hygiene & Tropical Medicine and the Handa Professor of Global Health. Ms Kiran Mazumdar-Shaw, Executive Chairperson, Biocon, said: “I welcome Professor Peter Piot to the Biocon Biologics board. He brings years of scientific expertise, long experience in public health interventions and policy framing on major health issues. His thought leadership and invaluable experience in global healthcare will greatly guide our actions in building Biocon Biologics into an innovative global leader in biosimilars committed to delivering affordable access to life saving Biologics.” On his decision to join the Biocon Biologics board, Professor Peter Piot said: “I am delighted to join dynamic Biocon Biologics and its vital mission of bringing the products of innovation to those who can benefit from them. The world over governments are challenged to contain the spiralling healthcare costs and companies like Biocon Biologics are committed to pursue the path of innovation that enables affordable access to patients globally and in turn helps healthcare systems lower their spends. With several exciting biosimilar molecules in its pipeline, I believe Biocon Biologics has the potential to be truly disruptive in addressing a global need for high quality, affordable biosimilar therapies to treat chronic diseases like diabetes and cancer and save many lives." Professor Piot has been appointed to the board of Biocon Biologics Limited for a period of three years starting January 21, 2021. -
Contact Via Email: [email protected] Or [email protected]
Curriculum Vitae CAROL WOLF RUNYAN (contact via email: [email protected] or [email protected]) EDUCATIONAL HISTORY: B.A. 1972 Department of Biology Macalester College St. Paul, Minnesota M.P.H. 1975 Interdisciplinary Studies Program School of Public Health University of Minnesota Minneapolis, Minnesota Pre-doctoral 1980- Bush Institute for Child and Family Policy Fellowship 1982 University of North Carolina Chapel Hill, North Carolina Ph.D. 1983 Department of Health Education (Minor: Epidemiology) School of Public Health University of North Carolina Chapel Hill, North Carolina Postdoctoral 1986 Department of Epidemiology (Injury Epidemiology) Fellowship School of Hygiene and Public Health Johns Hopkins University Baltimore, Maryland Special course 1992 Program for Technology Managers UNC Kenan-Flagler Business School Chapel Hill, NC Special course 2009 Leadership Development Program Center for Creative Leadership Greensboro, NC Special Program 2010 Fellow, Academic Leadership Program University of North Carolina-Chapel Hill Fall 2012 Council of Education in Public Health (CEPH) Reviewer Training Special Program 2013-14 Leadership in Innovative Team Science (LITeS) Senior Leadership Program University of Colorado School of Medicine Page 2 Curriculum vitae Carol W. Runyan EMPLOYMENT HISTORY: Current position: 2011-present Emeritus Professor Department of Health Behavior and Health Education University of North Carolina Gillings School of Global Public Health 2018-present Co-Director, Program for Injury Prevention, Education -
Sources of False Positives and False Negatives in the STATCHECK 1 Algorithm: Reply to Nuijten Et Al
Cite as: Schmidt, T. (2017). Sources of false positives and false negatives in the STATCHECK 1 algorithm: Reply to Nuijten et al. (2016). arXiv:1610.01010v8 [q-bio.NC] Sources of false positives and false negatives in the STATCHECK algorithm: Reply to Nuijten et al. (2016) arXiv:1610.01010v8 [q-bio.NC] Thomas Schmidt University of Kaiserslautern, Germany Experimental Psychology Unit www.sowi.uni-kl.de/psychologie [email protected] Abstract STATCHECK is an R algorithm designed to scan papers automatically for inconsistencies between test statistics and their associated p values (Nuijten et al., 2016). The goal of this comment is to point out an important and well-documented flaw in this busily applied algorithm: It cannot handle corrected p values. As a result, statistical tests applying appropriate corrections to the p value (e.g., for multiple tests, post-hoc tests, violations of assumptions, etc.) are likely to be flagged as reporting inconsistent statistics, whereas papers omitting necessary corrections are certified as correct. The STATCHECK algorithm is thus valid for only a subset of scientific papers, and conclusions about the quality or integrity of statistical reports should never be based solely on this program. STATCHECK is an R algorithm designed to scan papers automatically for inconsistencies between test statistics and their reported p values (Nuijten, Hartgerink, van Assen, Epskamp, and Wicherts, 2016). The algorithm is currently part of these authors’ project to automatically scan thousands of scientific psychology papers and post the results on a website when the program detects some discrepancy, essentially flagging papers for reporting inconsistent test statistics. -
Good Chemistry James J
Columbia College Fall 2012 TODAY Good Chemistry James J. Valentini Transitions from Longtime Professor to Dean of the College your Contents columbia connection. COVER STORY FEATURES The perfect midtown location: 40 The Home • Network with Columbia alumni Front • Attend exciting events and programs Ai-jen Poo ’96 gives domes- • Dine with a client tic workers a voice. • Conduct business meetings BY NATHALIE ALONSO ’08 • Take advantage of overnight rooms and so much more. 28 Stand and Deliver Joel Klein ’67’s extraordi- nary career as an attorney, educator and reformer. BY CHRIS BURRELL 18 Good Chemistry James J. Valentini transitions from longtime professor of chemistry to Dean of the College. Meet him in this Q&A with CCT Editor Alex Sachare ’71. 34 The Open Mind of Richard Heffner ’46 APPLY FOR The venerable PBS host MEMBERSHIP TODAY! provides a forum for guests 15 WEST 43 STREET to examine, question and NEW YORK, NY 10036 disagree. TEL: 212.719.0380 BY THOMAS VIncIGUERRA ’85, in residence at The Princeton Club ’86J, ’90 GSAS of New York www.columbiaclub.org COVER: LESLIE JEAN-BART ’76, ’77J; BACK COVER: COLIN SULLIVAN ’11 WITHIN THE FAMILY DEPARTMENTS ALUMNI NEWS Déjà Vu All Over Again or 49 Message from the CCAA President The Start of Something New? Kyra Tirana Barry ’87 on the successful inaugural summer of alumni- ete Mangurian is the 10th head football coach since there, the methods to achieve that goal. The goal will happen if sponsored internships. I came to Columbia as a freshman in 1967. (Yes, we you do the other things along the way.” were “freshmen” then, not “first-years,” and we even Still, there’s no substitute for the goal, what Mangurian calls 50 Bookshelf wore beanies during Orientation — but that’s a story the “W word.” for another time.) Since then, Columbia has compiled “The bottom line is winning,” he said. -
Changes on CRAN 2014-07-01 to 2014-12-31
NEWS AND NOTES 192 Changes on CRAN 2014-07-01 to 2014-12-31 by Kurt Hornik and Achim Zeileis New packages in CRAN task views Bayesian BayesTree. Cluster fclust, funFEM, funHDDC, pgmm, tclust. Distributions FatTailsR, RTDE, STAR, predfinitepop, statmod. Econometrics LinRegInteractive, MSBVAR, nonnest2, phtt. Environmetrics siplab. Finance GCPM, MSBVAR, OptionPricing, financial, fractal, riskSimul. HighPerformanceComputing GUIProfiler, PGICA, aprof. MachineLearning BayesTree, LogicForest, hdi, mlr, randomForestSRC, stabs, vcrpart. MetaAnalysis MAVIS, ecoreg, ipdmeta, metaplus. NumericalMathematics RootsExtremaInflections, Rserve, SimplicialCubature, fastGHQuad, optR. OfficialStatistics CoImp, RecordLinkage, rworldmap, tmap, vardpoor. Optimization RCEIM, blowtorch, globalOptTests, irace, isotone, lbfgs. Phylogenetics BAMMtools, BoSSA, DiscML, HyPhy, MPSEM, OutbreakTools, PBD, PCPS, PHYLOGR, RADami, RNeXML, Reol, Rphylip, adhoc, betapart, dendextend, ex- pands, expoTree, jaatha, kdetrees, mvMORPH, outbreaker, pastis, pegas, phyloTop, phyloland, rdryad, rphast, strap, surface, taxize. Psychometrics IRTShiny, PP, WrightMap, mirtCAT, pairwise. ReproducibleResearch NMOF. Robust TEEReg, WRS2, robeth, robustDA, robustgam, robustloggamma, robustreg, ror, rorutadis. Spatial PReMiuM. SpatioTemporal BayesianAnimalTracker, TrackReconstruction, fishmove, mkde, wildlifeDI. Survival DStree, ICsurv, IDPSurvival, MIICD, MST, MicSim, PHeval, PReMiuM, aft- gee, bshazard, bujar, coxinterval, gamboostMSM, imputeYn, invGauss, lsmeans, multipleNCC, paf, penMSM, spBayesSurv, -
Sara Lopez-Pintado, Phd
Sara Lopez-Pintado, PhD Associate Professor Department of Health Sciences Bouvé College of Health Sciences Northeastern University 316 Robinson Hall, Rm 312c Boston, MA 02115 phone: 617-373-8249 (office) email: [email protected] Date of preparation of CV: October 17, 2018 Personal data: Name: Sara Lopez-Pintado Birthdate: May 2, 1975 Birthplace: Cordoba, Spain Citizenship: Spain Academic appointments and work experience: August, 2018 - present, Associate Professor, Department of Health Sciences, Bouvé Col- • lege of Health Sciences, Northeastern University, Boston, MA, USA. January, 2010 - August 2018, Assistant Professor of Biostatistics, Department of Biostatis- • tics, Mailman School of Public Health, Columbia University, New York, USA. September, 2006 - present, Associate Professor of Statistics, Department of Economics • and Quantitative Methods, University Pablo de Olavide, Seville, Spain, (currently on leave). September, 2007 - August, 2008, Visiting Professor, Department of Biostatistics, Columbia • University, New York, USA. September, 2005 - August 2006, Postdoc and Lecturer, Department of Statistics, Rutgers • University, New Jersey, USA. September, 1998 - August, 2005, Instructor, Department of Statistics and Econometrics, • University Carlos III of Madrid, Spain. 1 Education: September, 1998 - August, 2005, PhD (Statistics) July, 2005, Department of Statistics • and Econometrics, University Carlos III of Madrid, Spain. Thesis title: On the concept of depth for functional data Sponsor: Juan Romo Best thesis award in University Carlos III of Madrid, 2005 October, 1994 - July, 1998, BA Mathematics (field statistics), University of Sevilla, Spain. • Training: September, 2005 - August 2006, Postdoctoral training, Department of Statistics, Rutgers • University, New Jersey, USA. Gaps in work/training/education: I had two children during the tenure track period: Daniel (born in September 2011) and Emma (born in May 2014). -
From Inquiry to Impact Innovating Instruction
SPRING/SUMMER 2017 FROM INQUIRY TO IMPACT Nursing scholars channel curiosity into practice change INNOVATING INSTRUCTION Concept-based curriculum to launch this fall Recent DNP graduates celebrate in Cooper Hall after earning their doctoral degrees, which prepare them for careers in advanced practice and leadership in the healthcare system. Front Cover: Assistant Professors Linsey Steege, Barbara King, Lisa Bratzke, Tonya Roberts Photography Front/Inside Front Cover: Alexander André/School of Nursing ForwardNursing Volume 3, Issue 1 Spring/Summer 2017 EDITORIAL STAFF Alexander André Amy Bethel Jennifer Garrett PHOTOGRAPHY Alexander André, SoN; UWSMPH CONTENTS Media Solutions; John Maniaci, UW Health Communications. Uncredited photos are either stock or nonprofessional photography. DESIGN UWSMPH Media Solutions FEATURES SCHOOL OF NURSING INNOVATIVE ADMINISTRATION Linda D. Scott, Dean 4 INSTRUCTION Melanie Schmidt, Chief of Staff Concept-based curriculum Barbara J. Bowers, Associate Dean for Research and Sponsored Programs to launch this fall Susan Zahner, Associate Dean for Faculty Affairs Dundee McNair, Associate Dean FROM INQUIRY for Administration 7 Earlise Ward, Interim Associate Dean TO IMPACT for Academic Affairs A closer look at the nursing scholars Karen Mittelstadt, Assistant Dean for Academic Affairs channeling their curiosity into change that improves nursing practice, patient NURSES ALUMNI ORGANIZATION experience and health outcomes Madeleine Wentzel, President 701 Highland Avenue Madison, WI 53705 LEAD FROM WHERE [email protected] -
The Reproducibility of Statistical Results in Psychological Research: an Investigation Using Unpublished Raw Data
Psychological Methods © 2020 American Psychological Association 2020, Vol. 2, No. 999, 000 ISSN: 1082-989X https://doi.org/10.1037/met0000365 The Reproducibility of Statistical Results in Psychological Research: An Investigation Using Unpublished Raw Data Richard Artner, Thomas Verliefde, Sara Steegen, Sara Gomes, Frits Traets, Francis Tuerlinckx, and Wolf Vanpaemel Faculty of Psychology and Educational Sciences, KU Leuven Abstract We investigated the reproducibility of the major statistical conclusions drawn in 46 articles published in 2012 in three APA journals. After having identified 232 key statistical claims, we tried to reproduce, for each claim, the test statistic, its degrees of freedom, and the corresponding p value, starting from the raw data that were provided by the authors and closely following the Method section in the article. Out of the 232 claims, we were able to successfully reproduce 163 (70%), 18 of which only by deviating from the article’s analytical description. Thirteen (7%) of the 185 claims deemed significant by the authors are no longer so. The reproduction successes were often the result of cumbersome and time-consuming trial-and-error work, suggesting that APA style reporting in conjunction with raw data makes numerical verification at least hard, if not impossible. This article discusses the types of mistakes we could identify and the tediousness of our reproduction efforts in the light of a newly developed taxonomy for reproducibility. We then link our findings with other findings of empirical research on this topic, give practical recommendations on how to achieve reproducibility, and discuss the challenges of large-scale reproducibility checks as well as promising ideas that could considerably increase the reproducibility of psychological research. -
Yuanjia Wang 722 West 168Th Street, Room 647 New York, NY 10032 Email: [email protected] Academic Appointments
Yuanjia Wang 722 West 168th Street, Room 647 New York, NY 10032 Email: [email protected] Academic Appointments: • Professor of Biostatistics (in Psychiatry, with Tenure), 2018-present Department of Biostatistics, Mailman School of Public Health, Columbia University Department of Psychiatry, Columbia University Medical Center, Columbia University • Associate Professor of Biostatistics (in Psychiatry, with Tenure), 2013-2018 Department of Biostatistics, Mailman School of Public Health, Columbia University Department of Psychiatry, Columbia University Medical Center, Columbia University • Assistant Professor of Biostatistics (in Psychiatry), 2006-2013 Department of Biostatistics, Mailman School of Public Health, Columbia University Department of Psychiatry, Columbia University Medical Center, Columbia University, • Core Faculty Member, 2006-current Division of Biostatistics, New York State Psychiatric Institute • Affiliated Member, 2018-current, Data Science Institute, Columbia University • Affiliate member, 2019-current, Zuckerman Institute for Mind, Brain, and Behavior, Columbia University Academic Training: • Ph.D. in Statistics, Department of Statistics, Columbia University, 2005 • B.A., Information Management and Decision Theory, University of Science and Technol- ogy of China, 2001 • B.A., Computer Sciences (Double Major), University of Science and Technology of China, 2001 Traineeship: • Post-Doctoral Research Scientist, 2005–2006, Gertrude H. Sergievsky Center, Columbia University Medical Center Honors: • Elected Fellow, American Statistical Association (ASA). 2016. • Tow Faculty Leadership Scholars Award, Mailman School of Public Health, Columbia Univer- sity. 2015-2018. • Distinguished Poster Award, The International Society for Clinical Trials and Methodology 7th Annual Meeting, Baltimore, 2010. • Diversity Research Fellowship Award, Columbia University. 2009-2010 • Calderone Prize for Junior Faculty, Columbia University. 2006-2007 1 • Faculty Fellowship, Columbia University. 2001-2005 • Fellowship, Chinese Academy of Sciences. -
CURRICULUM VITAE Mary Travis Bassett Commissioner New York
CURRICULUM VITAE Mary Travis Bassett Commissioner New York City Department of Health and Mental Hygiene 42-09 28th Street Queens, NY 11101 347-396-4100 Date of preparation April 2018 Academic Training June 1985 M.P.H., University of Washington Seattle, Washington May 1979 M.D., Columbia College of Physicians and Surgeons New York, New York June 1974 A.B., Cum Laude, History and Science, Radcliffe College Cambridge, Massachusetts Traineeships 1983-1985 Robert Wood Johnson Clinical Scholar University of Washington Seattle, Washington 1982-1983 Chief Resident, Department of Medicine Harlem Hospital Center New York, New York 1979-1982 Residency Training, Internal Medicine Harlem Hospital Center New York, New York Board Certification and Licensure Board Qualification 1983 Diplomate, American Board of Internal Medicine Candidate 089171 Licensure 1981 New York (active) Committees, Professional Organizations and Societies Member Tobacco Products Scientific Advisory Committee, Food and Drug Administration (February 2018-present) Member National Academy of Medicine (2017-present) Member Advisory Board, New York University College of Global Public Health (2017-present) Member Board of Directors, Truth Initiative (2017-present) Member External Advisory Board, NYU School of Medicine, Department of Population Health (2016-present) Chair NYC Board of Health (2014-present) Chair and President Board of Directors, Fund for Public Health in New York City (2014- present) Member Board of Directors, NYC Health + Hospitals Corporation (2014- present) Member -
Replicability, Robustness, and Reproducibility in Psychological Science
1 Replicability, Robustness, and Reproducibility in Psychological Science Brian A. Nosek Center for Open Science; University of Virginia Tom E. Hardwicke University of Amsterdam Hannah Moshontz University of Wisconsin-Madison Aurélien Allard University of California, Davis Katherine S. Corker Grand Valley State University Anna Dreber Stockholm School of Economics; University of Innsbruck Fiona Fidler University of Melbourne Joe Hilgard Illinois State University Melissa Kline Struhl Center for Open Science Michèle Nuijten Meta-Research Center; Tilburg University Julia Rohrer Leipzig University Felipe Romero University of Groningen Anne Scheel Eindhoven University of Technology Laura Scherer University of Colorado Denver - Anschutz Medical Campus Felix Schönbrodt Ludwig-Maximilians-Universität München, LMU Open Science Center Simine Vazire University of Melbourne In press at the Annual Review of Psychology Final version Completed: April 6, 2021 Authors’ note: B.A.N. and M.K.S. are employees of the nonprofit Center for Open Science that has a mission to increase openness, integrity, and reproducibility of research. K.S.C. is the unpaid executive officer of the nonprofit Society for the Improvement of Psychological Science. This work was supported by grants to B.A.N. from Arnold Ventures, John Templeton Foundation, Templeton World Charity Foundation, and Templeton Religion Trust. T.E.H. received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 841188. We thank Adam Gill for assistance creating Figures 1, 2, and S2. Data, materials, and code are available at https://osf.io/7np92/. B.A.N. Drafted the outline and manuscript sections, collaborated with section leads on conceptualizing and drafting their components, coded replication study outcomes for Figure 1, coded journal policies for Figure 5.