Microbial Symbiosis in Annelida
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Diversity of Bacteria and Archaea in the Deep-Sea Low-Temperature Hydrothermal Sulfide Chimney of the Northeastern Pacific Ocean
African Journal of Biotechnology Vol. 11(2), pp. 337-345, 5 January, 2012 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJB11.2692 ISSN 1684–5315 © 2012 Academic Journals Full Length Research Paper Diversity of bacteria and archaea in the deep-sea low-temperature hydrothermal sulfide chimney of the Northeastern Pacific Ocean Xia Ding1*, Xiao-Jue Peng1#, Xiao-Tong Peng2 and Huai-Yang Zhou3 1College of Life Sciences and Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, Nanchang University, Nanchang 330031, China. 2Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China. 3National Key Laboratory of Marine Geology, Tongji University, Shanghai 200092, China. Accepted 4 November, 2011 Our knowledge of the diversity and role of hydrothermal vents microorganisms has considerably expanded over the past decade, while little is known about the diversity of microorganisms in low-temperature hydrothermal sulfide chimney. In this study, denaturing gradient gel electrophoresis (DGGE) and 16S rDNA sequencing were used to examine the abundance and diversity of microorganisms from the exterior to the interior of the deep sea low-temperature hydrothermal sulfide chimney of the Northeastern Pacific Ocean. DGGE profiles revealed that both bacteria and archaea could be examined in all three zones of the chimney wall and the compositions of microbial communities within different zones were vastly different. Overall, for archaea, cell abundance was greatest in the outermost zone of the chimney wall. For bacteria, there was no significant difference in cell abundance among three zones. In addition, phylogenetic analysis revealed that Verrucomicrobia and Deltaproteobacteria were the predominant bacterial members in exterior zone, beta Proteobacteria were the dominant members in middle zone, and Bacillus were the abundant microorganisms in interior zone. -
Sponge–Microbe Interactions on Coral Reefs: Multiple Evolutionary Solutions to a Complex Environment
fmars-08-705053 July 14, 2021 Time: 18:29 # 1 REVIEW published: 20 July 2021 doi: 10.3389/fmars.2021.705053 Sponge–Microbe Interactions on Coral Reefs: Multiple Evolutionary Solutions to a Complex Environment Christopher J. Freeman1*, Cole G. Easson2, Cara L. Fiore3 and Robert W. Thacker4,5 1 Department of Biology, College of Charleston, Charleston, SC, United States, 2 Department of Biology, Middle Tennessee State University, Murfreesboro, TN, United States, 3 Department of Biology, Appalachian State University, Boone, NC, United States, 4 Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY, United States, 5 Smithsonian Tropical Research Institute, Panama City, Panama Marine sponges have been successful in their expansion across diverse ecological niches around the globe. Pioneering work attributed this success to both a well- developed aquiferous system that allowed for efficient filter feeding on suspended organic matter and the presence of microbial symbionts that can supplement host Edited by: heterotrophic feeding with photosynthate or dissolved organic carbon. We now know Aldo Cróquer, The Nature Conservancy, that sponge-microbe interactions are host-specific, highly nuanced, and provide diverse Dominican Republic nutritional benefits to the host sponge. Despite these advances in the field, many current Reviewed by: hypotheses pertaining to the evolution of these interactions are overly generalized; these Ryan McMinds, University of South Florida, over-simplifications limit our understanding of the evolutionary processes shaping these United States symbioses and how they contribute to the ecological success of sponges on modern Alejandra Hernandez-Agreda, coral reefs. To highlight the current state of knowledge in this field, we start with seminal California Academy of Sciences, United States papers and review how contemporary work using higher resolution techniques has Torsten Thomas, both complemented and challenged their early hypotheses. -
Classification
Science Classification Pupil Workbook Year 5 Unit 5 Name: 2 3 Existing Knowledge: Why do we put living things into different groups and what are the groups that we can separate them into? You can think about the animals in the picture and all the others that you know. 4 Session 1: How do we classify animals with a backbone? Key Knowledge Key Vocabulary Animals known as vertebrates have a spinal column. Vertebrates Some vertebrates are warm-blooded meaning that they Species maintain a consistent body temperature. Some are cold- Habitat blooded, meaning they need to move around to warm up or cool down. Spinal column Vertebrates are split into five main groups known as Warm-blooded/Cold- mammals, amphibians, reptiles, birds and fish. blooded Task: Look at the picture here and think about the different groups that each animal is part of. How is each different to the others and which other animals share similar characteristics? Write your ideas here: __________________________ __________________________ __________________________ __________________________ __________________________ __________________________ ____________________________________________________ ____________________________________________________ ____________________________________________________ ____________________________________________________ ____________________________________________________ 5 How do we classify animals with a backbone? Vertebrates are the most advanced organisms on Earth. The traits that make all of the animals in this group special are -
Annelida: Clitellata: Naididae): a New Non-Indigenous Species for Europe, and Other Non-Native Annelids in the Schelde Estuary
Aquatic Invasions (2013) Volume 8, Issue 1: 37–44 doi: http://dx.doi.org/10.3391/ai.2013.8.1.04 Open Access © 2013 The Author(s). Journal compilation © 2013 REABIC Research Article Bratislavia dadayi (Michaelsen, 1905) (Annelida: Clitellata: Naididae): a new non-indigenous species for Europe, and other non-native annelids in the Schelde estuary Jan Soors1*, Ton van Haaren2, Tarmo Timm3 and Jeroen Speybroeck1 1 Research Institute for Nature and Forest (INBO), Kliniekstraat 25, 1070 Brussel, Belgium 2 Grontmij, Sciencepark 406, 1090 HC Amsterdam, The Netherlands 3 Centre for Limnology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, 61117 Rannu, Tartumaa, Estonia E-mail: [email protected] (JS), [email protected] (TvH), [email protected] (JS), [email protected] (TT) *Corresponding author Received: 18 November 2011 / Accepted: 24 January 2013 / Published online: 21 February 2013 Handling editor: Vadim Panov Abstract For the first time, the freshwater oligochaete species Bratislavia dadayi (Michaelsen, 1905) is recorded in Europe. The species was found at three subtidal stations in the Schelde estuary in Belgium, where it was probably introduced from the Americas. We provide an overview of the species’ nomenclature, diagnostics, distribution, and ecology. Bratislavia dadayi is one of 11 non-indigenous annelids currently known to occur in the Schelde estuary. Key words: alien species; Annelida; Clitellata; Oligochaeta; Polychaeta; Belgium Introduction Annelids, and oligochaetes in particular, are a less-studied group, often overlooked when Over the last 150 years, the number of non- considering alien species. Yet the best studied native species turning up in areas far from their Annelid species, Lumbricus terrestris (L., 1758), original range has increased significantly (Bax et is now considered a widespread invasive species al. -
Phylogenetic Diversity of Bacterial Endosymbionts in the Gutless Marine Oligochete Olaviusloisae (Annelida)
MARINE ECOLOGY PROGRESS SERIES Vol. 178: 271-280.1999 Published March 17 Mar Ecol Prog Ser l Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida) Nicole ~ubilier'~*,Rudolf ~mann',Christer Erseus2, Gerard Muyzer l, SueYong park3, Olav Giere4, Colleen M. cavanaugh3 'Molecular Ecology Group, Max Planck Institute of Marine Microbiology, Celsiusstr. 1. D-28359 Bremen, Germany 'Department of Invertebrate Zoology. Swedish Museum of Natural History. S-104 05 Stockholm. Sweden 3~epartmentof Organismic and Evolutionary Biology, Harvard University, The Biological Laboratories, Cambridge, Massachusetts 02138, USA 4Zoologisches Institut und Zoologisches Museum. University of Hamburg, D-20146 Hamburg, Germany ABSTRACT: Endosymbiotic associations with more than 1 bacterial phylotype are rare anlong chemoautotrophic hosts. In gutless marine oligochetes 2 morphotypes of bacterial endosymbionts occur just below the cuticle between extensions of the epidermal cells. Using phylogenetic analysis, in situ hybridization, and denaturing gradient gel electrophoresis based on 16s ribosomal RNA genes, it is shown that in the gutless oligochete Olavius Ioisae, the 2 bacterial morphotypes correspond to 2 species of diverse phylogenetic origin. The larger symbiont belongs to the gamma subclass of the Proteobac- tend and clusters with other previously described chemoautotrophic endosymbionts. The smaller syrnbiont represents a novel phylotype within the alpha subclass of the Proteobacteria. This is distinctly cllfferent from all other chemoautotropl-uc hosts with symbiotic bacteria which belong to either the gamma or epsilon Proteobacteria. In addition, a third bacterial morphotype as well as a third unique phylotype belonging to the spirochetes was discovered in these hosts. Such a phylogenetically diverse assemblage of endosymbiotic bacteria is not known from other marine invertebrates. -
The Zinc-Mediated Sulfide-Binding Mechanism of Hydrothermal Vent Tubeworm 400-Kda Hemoglobin
Cah. Biol. Mar. (2006) 47 : 371-377 The zinc-mediated sulfide-binding mechanism of hydrothermal vent tubeworm 400-kDa hemoglobin Jason F. FLORES1* and Stéphane M. HOURDEZ2 (1) Department of Biology, The Pennsylvania State University *Corresponding author: The University of North Carolina at Charlotte, Department of Biology, 9201 University City Boulevard, Charlotte, NC 28223, USA, FAX: 704-687-3128, E-mail: [email protected] (2) Université Pierre & Marie Curie-Paris 6, CNRS-UMR 7144 AD2M, Equipe Ecophysiologie Adaptation et Evolution Moleculaires, Station Biologique de Roscoff, 29680 Roscoff, France Abstract: Hydrothermal vent and cold seep tubeworms possess two hemoglobin (Hb) types, a 3600-kDa hexagonal bilayer Hb as well as a 400-kDa spherical Hb. Both Hbs can reversibly and simultaneously bind and transport oxygen and hydrogen sulfide used by the worm’s endosymbiotic bacteria to fix carbon. The vestimentiferan 400-kDa Hb has been shown to consist of 24 polypeptide chains and 12 zinc ions that are bound to specific amino acids within the six A2 globin chains of the molecule. Flores et al. (2005) determined that the ligated zinc ions were directly involved in the sulfide binding mechanism of this Hb. This discovery contradicted previous work suggesting that free-cysteine residues were the sole sulfide binding mechanism of the 400-kDa Hb. In the present study, we investigated the effects of acidic pH pretreatment and zinc chelator concentrations on the binding of sulfide by the Hb. We show that acidic pH pretreatment, as well as NEM capping of free-cysteines, does not affect sulfide binding by the purified Hb. -
Biodiversity and Trophic Ecology of Hydrothermal Vent Fauna Associated with Tubeworm Assemblages on the Juan De Fuca Ridge
Biogeosciences, 15, 2629–2647, 2018 https://doi.org/10.5194/bg-15-2629-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Biodiversity and trophic ecology of hydrothermal vent fauna associated with tubeworm assemblages on the Juan de Fuca Ridge Yann Lelièvre1,2, Jozée Sarrazin1, Julien Marticorena1, Gauthier Schaal3, Thomas Day1, Pierre Legendre2, Stéphane Hourdez4,5, and Marjolaine Matabos1 1Ifremer, Centre de Bretagne, REM/EEP, Laboratoire Environnement Profond, 29280 Plouzané, France 2Département de sciences biologiques, Université de Montréal, C.P. 6128, succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada 3Laboratoire des Sciences de l’Environnement Marin (LEMAR), UMR 6539 9 CNRS/UBO/IRD/Ifremer, BP 70, 29280, Plouzané, France 4Sorbonne Université, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France 5CNRS, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France Correspondence: Yann Lelièvre ([email protected]) Received: 3 October 2017 – Discussion started: 12 October 2017 Revised: 29 March 2018 – Accepted: 7 April 2018 – Published: 4 May 2018 Abstract. Hydrothermal vent sites along the Juan de Fuca community structuring. Vent food webs did not appear to be Ridge in the north-east Pacific host dense populations of organised through predator–prey relationships. For example, Ridgeia piscesae tubeworms that promote habitat hetero- although trophic structure complexity increased with ecolog- geneity and local diversity. A detailed description of the ical successional stages, showing a higher number of preda- biodiversity and community structure is needed to help un- tors in the last stages, the food web structure itself did not derstand the ecological processes that underlie the distribu- change across assemblages. -
Geo-Biological Coupling of Authigenic Carbonate Formation and Autotrophic Faunal Colonization at Deep-Sea Methane Seeps II. Geo-Biological Landscapes
Chapter 3 Geo-Biological Coupling of Authigenic Carbonate Formation and Autotrophic Faunal Colonization at Deep-Sea Methane Seeps II. Geo-Biological Landscapes TakeshiTakeshi Naganuma Naganuma Additional information is available at the end of the chapter http://dx.doi.org/10.5772/intechopen.78978 Abstract Deep-sea methane seeps are typically shaped with authigenic carbonates and unique biomes depending on methane-driven and methane-derived metabolisms. Authigenic carbonates vary in δ13C values due probably to 13δC variation in the carbon sources (directly carbon dioxide and bicarbonate, and ultimately methane) which is affected by the generation and degradation (oxidation) of methane at respective methane seeps. Anaerobic oxidation of methane (AOM) by specially developed microbial consortia has significant influences on the carbonate13 δ C variation as well as the production of carbon dioxide and hydrogen sulfide for chemoautotrophic biomass production. Authigenesis of carbonates and faunal colonization are thus connected. Authigenic carbonates also vary in Mg contents that seem correlated again to faunal colonization. Among the colonizers, mussels tend to colonize low δ13C carbonates, while gutless tubeworms colonize high- Mg carbonates. The types and varieties of such geo-biological landscapes of methane seeps are overviewed in this chapter. A unique feature of a high-Mg content of the rock- tubeworm conglomerates is also discussed. Keywords: lithotrophy, chemoautotrophy, thiotrophy, methanotrophy, stable carbon isotope, δ13C, isotope fractionation, Δ13C, calcite, dolomite, anaerobic oxidation of methane (AOM), sulfate-methane transition zone (SMTZ), Lamellibrachia tubeworm, Bathymodiolus mussel, Calyptogena clam 1. Introduction Aristotle separated the world into two realms, nature and living things (originally animals), the latter having structures, processes, and functions of spontaneous formation and voluntary © 2016 The Author(s). -
Size Variation and Geographical Distribution of the Luminous Earthworm Pontodrilus Litoralis (Grube, 1855) (Clitellata, Megascolecidae) in Southeast Asia and Japan
A peer-reviewed open-access journal ZooKeys 862: 23–43 (2019) Size variation and distribution of Pontodrilus litoralis 23 doi: 10.3897/zookeys.862.35727 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Size variation and geographical distribution of the luminous earthworm Pontodrilus litoralis (Grube, 1855) (Clitellata, Megascolecidae) in Southeast Asia and Japan Teerapong Seesamut1,2,4, Parin Jirapatrasilp2, Ratmanee Chanabun3, Yuichi Oba4, Somsak Panha2 1 Biological Sciences Program, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand 2 Ani- mal Systematics Research Unit, Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand 3 Program in Animal Science, Faculty of Agriculture Technology, Sakon Nakhon Rajabhat University, Sakon Nakhon 47000, Thailand 4 Department of Environmental Biology, Chubu University, Kasugai 487-8501, Japan Corresponding authors: Somsak Panha ([email protected]), Yuichi Oba ([email protected]) Academic editor: Samuel James | Received 24 April 2019 | Accepted 13 June 2019 | Published 9 July 2019 http://zoobank.org/663444CA-70E2-4533-895A-BF0698461CDF Citation: Seesamut T, Jirapatrasilp P, Chanabun R, Oba Y, Panha S (2019) Size variation and geographical distribution of the luminous earthworm Pontodrilus litoralis (Grube, 1855) (Clitellata, Megascolecidae) in Southeast Asia and Japan. ZooKeys 862: 23–42. https://doi.org/10.3897/zookeys.862.35727 Abstract The luminous earthworm Pontodrilus litoralis (Grube, 1855) occurs in a very wide range of subtropical and tropical coastal areas. Morphometrics on size variation (number of segments, body length and diameter) and genetic analysis using the mitochondrial cytochrome c oxidase subunit 1 (COI) gene sequence were conducted on 14 populations of P. -
Annelida, Oligochaeta) from the Island of Elba (Italy)
Org. Divers. Evol. 2, 289–297 (2002) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ode Taxonomy and new bacterial symbioses of gutless marine Tubificidae (Annelida, Oligochaeta) from the Island of Elba (Italy) Olav Giere1,*, Christer Erséus2 1 Zoologisches Institut und Zoologisches Museum, Universität Hamburg, Germany 2 Department of Invertebrate Zoology, Swedish Museum of Natural History, Stockholm Received 15 April 2002 · Accepted 9 July 2002 Abstract In shallow sublittoral sediments of the north-west coast of the Island of Elba, Italy, a new gutless marine oligochaete, Olavius ilvae n. sp., was found together with a congeneric but not closely related species, O. algarvensis Giere et al., 1998. In diagnostic features of the genital organs, the new species differs from other Olavius species in having bipartite atria and very long, often folded spermathecae, but lacking penial chaetae.The Elba form of O. algarvensis has some structural differences from the original type described from the Algarve coast (Portugal).The two species from Elba share characteristics not previously reported for gutless oligochaetes: the lumen of the body cavity is unusually constrict- ed and often filled with chloragocytes, and the symbiotic bacteria are often enclosed in vacuoles of the epidermal cells. Regarding the bacterial ultrastructure, the species share three similar morphotypes as symbionts; additionally, in O. algarvensis a rare fourth type was found.The diver- gence of the symbioses in O. algarvensis, and the coincidence in structural -
Spatial Variation in the Reproductive Biology of Paralvinella Palmiformis (Polychaeta: Alvinellidae) from a Vent Field on the Juan De Fuca Ridge
MARINE ECOLOGY PROGRESS SERIES Vol. 255: 171–181, 2003 Published June 24 Mar Ecol Prog Ser Spatial variation in the reproductive biology of Paralvinella palmiformis (Polychaeta: Alvinellidae) from a vent field on the Juan de Fuca Ridge Jonathan T. P. Copley1,*, Paul A. Tyler 1, Cindy L. Van Dover 2, Steven J. Philp1 1School of Ocean and Earth Science, Southampton Oceanography Centre, University of Southampton, European Way, Southampton SO14 3ZH, United Kingdom 2Biology Department, College of William & Mary, Williamsburg, Virginia 23187, USA ABSTRACT: The microdistribution and dynamics of deep-sea hydrothermal vent communities often reflect the extreme heterogeneity of their environment. Here we present an assessment of spatial variation in the reproductive development of the alvinellid polychaete Paralvinella palmiformis at the High Rise vent field (Endeavour Segment, Juan de Fuca Ridge, NE Pacific). Samples collected from different locations across the vent field suggest patchy reproductive development for this species. Males and females from several locations contained few or no developing gametes, while gametes were abundant in samples collected at the same time from other locations. Samples lacking gametes were distinguished by body size-frequency distributions with peaks at smaller sizes and the presence or absence of other fauna consistent with early stage assemblages in a successional mosaic model previously proposed for Endeavour Segment communities. Where gametes were present, synchrony of reproductive development between females within samples and between samples was evident. Reproductive synchrony between pairs of samples initially declined over a 7 d interval between sam- ples, suggesting a rapid rate of reproductive development for P. palmiformis. Samples collected 1 mo apart, however, displayed similar frequency distributions of developing gametes. -
Six3 Demarcates the Anterior-Most Developing Brain Region In
Steinmetz et al. EvoDevo 2010, 1:14 http://www.evodevojournal.com/content/1/1/14 RESEARCH Open Access Six3 demarcates the anterior-most developing brain region in bilaterian animals Patrick RH Steinmetz1,6†, Rolf Urbach2†, Nico Posnien3,7, Joakim Eriksson4,8, Roman P Kostyuchenko5, Carlo Brena4, Keren Guy1, Michael Akam4*, Gregor Bucher3*, Detlev Arendt1* Abstract Background: The heads of annelids (earthworms, polychaetes, and others) and arthropods (insects, myriapods, spiders, and others) and the arthropod-related onychophorans (velvet worms) show similar brain architecture and for this reason have long been considered homologous. However, this view is challenged by the ‘new phylogeny’ placing arthropods and annelids into distinct superphyla, Ecdysozoa and Lophotrochozoa, together with many other phyla lacking elaborate heads or brains. To compare the organisation of annelid and arthropod heads and brains at the molecular level, we investigated head regionalisation genes in various groups. Regionalisation genes subdivide developing animals into molecular regions and can be used to align head regions between remote animal phyla. Results: We find that in the marine annelid Platynereis dumerilii, expression of the homeobox gene six3 defines the apical region of the larval body, peripherally overlapping the equatorial otx+ expression. The six3+ and otx+ regions thus define the developing head in anterior-to-posterior sequence. In another annelid, the earthworm Pristina, as well as in the onychophoran Euperipatoides, the centipede Strigamia and the insects Tribolium and Drosophila,asix3/optix+ region likewise demarcates the tip of the developing animal, followed by a more posterior otx/otd+ region. Identification of six3+ head neuroectoderm in Drosophila reveals that this region gives rise to median neurosecretory brain parts, as is also the case in annelids.