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Universidad De Concepción Facultad De Ciencias Naturales Y
Universidad de Concepción Facultad de Ciencias Naturales y Oceanográficas Programa de Magister en Ciencias mención Botánica DIVERSIDAD DE MACROHONGOS EN ÁREAS DESÉRTICAS DEL NORTE GRANDE DE CHILE Tesis presentada a la Facultad de Ciencias Naturales y Oceanográficas de la Universidad de Concepción para optar al grado de Magister en Ciencias mención Botánica POR: SANDRA CAROLINA TRONCOSO ALARCÓN Profesor Guía: Dr. Götz Palfner Profesora Co-Guía: Dra. Angélica Casanova Mayo 2020 Concepción, Chile AGRADECIMIENTOS Son muchas las personas que han contribuido durante el proceso y conclusión de este trabajo. En primer lugar quiero agradecer al Dr. Götz Palfner, guía de esta tesis y mi profesor desde el año 2014 y a la Dra. Angélica Casanova, quienes con su experiencia se han esforzado en enseñarme y ayudarme a llegar a esta instancia. A mis compañeros de laboratorio, Josefa Binimelis, Catalina Marín y Cristobal Araneda, por la ayuda mutua y compañía que nos pudimos brindar en el laboratorio o durante los viajes que se realizaron para contribuir a esta tesis. A CONAF Atacama y al Proyecto RT2716 “Ecofisiología de Líquenes Antárticos y del desierto de Atacama”, cuyas gestiones o financiamientos permitieron conocer un poco más de la diversidad de hongos y de los bellos paisajes de nuestro desierto chileno. Agradezco al Dr. Pablo Guerrero y a todas las personas que enviaron muestras fúngicas desertícolas al Laboratorio de Micología para identificarlas y que fueron incluidas en esta investigación. También agradezco a mi familia, mis padres, hermanos, abuelos y tíos, que siempre me han apoyado y animado a llevar a cabo mis metas de manera incondicional. -
Gymnomyces Xerophilus Sp. Nov. (Sequestrate Russulaceae), an Ectomycorrhizal Associate of Quercus in California
MYCOLOGICAL RESEARCH I I0 (2006) 57 5-582 Gymnomyces xerophilus sp. nov. (sequestrate Russulaceae), an ectomycorrhizal associate of Quercus in California Matthew E. SMITHa1*,James M. TRAPPE~,Dauid M. RIZZOa, Steven I. MILLERC 'Department of Plant Pathology, University of California at Davis, Davis CA 95616, USA b~epartmentof Forest Science, Oregon State University, Camallis, OR 97331-5752, USA CDeparhnentof Botany, University of Wyoming, Laramie, WY 82071, USA ARTICLE INFO ABSTRACT Article history: Gymnomyces xerophilus sp. nov., a sequestrate species in the Russulaceae, is characterized Received 30 August 2005 and descn'bed morphologically as a new species from Quercus-dominated woodlands in Accepted 14 February 2006 California. ITS sequences recovered from healthy, ectomycorrhizal roots of Quercus dougla- Corresponding Editor: Michael Weiss sii and Q. wislizeni matched those of G. xerophfius basidiomata, confirming the ectomycor- -- rhizal status of this fungus. Phylogenetic analysis of the ITS region places G. xerophilus in Keywords: a clade with both agaricoid (Russula in the section Polychromae) and sequestrate (Gymno- Basidiomycota myces, Cystangium) relatives. We include a dichotomous key to the species of Gymnomyces Hypogeous fungi associated with Quercus. ITS O 2006 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Molecular phylogeny Russula Introduction mycelium, potentially reducing drought stress (Duddridge et al. 1980; Parke et al. 1983). Quercus-dominated ecosystems cover about one third of dali- Although the EM fungi associated with Quercus in California fornia's 404,000bm2(Pavlik et al. 1991). Quercus spp. are well have not been studied extensively, Thiers (1984) and Trappe adapted to the state's extensive areas of dry, Mediterranean and Claridge (2005) suggest that seasonally dry climates exert climate, with at least 7 species considered endemic (Nixon a selection pressure towards a sequestrate fruiting habit in 2002). -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
The Secotioid Syndrome
76(1) Mycologia January -February 1984 Official Publication of the Mycological Society of America THE SECOTIOID SYNDROME Department of Biological Sciences, Sun Francisco State University, Sun Francisco, California 94132 I would like to begin this lecture by complimenting the Officers and Council of The Mycological Society of America for their high degree of cooperation and support during my term of office and for their obvious dedication to the welfare of the Society. In addition. I welcome the privilege of expressing my sincere appreciation to the membership of The Mycological Society of America for al- lowing me to serve them as President and Secretary-Treasurer of the Society. It has been a long and rewarding association. Finally, it is with great pleasure and gratitude that I dedicate this lecture to Dr. Alexander H. Smith, Emeritus Professor of Botany at the University of Michigan, who, over thirty years ago in a moment of weakness, agreed to accept me as a graduate student and who has spent a good portion of the ensuing years patiently explaining to me the intricacies, inconsis- tencies and attributes of the higher fungi. Thank you, Alex, for the invaluable experience and privilege of spending so many delightful and profitable hours with you. The purpose of this lecture is to explore the possible relationships between the gill fungi and the secotioid fungi, both epigeous and hypogeous, and to present a hypothesis regarding the direction of their evolution. Earlier studies on the secotioid fungi have been made by Harkness (I), Zeller (13). Zeller and Dodge (14, 15), Singer (2), Smith (5. -
A Preliminary Checklist of Arizona Macrofungi
A PRELIMINARY CHECKLIST OF ARIZONA MACROFUNGI Scott T. Bates School of Life Sciences Arizona State University PO Box 874601 Tempe, AZ 85287-4601 ABSTRACT A checklist of 1290 species of nonlichenized ascomycetaceous, basidiomycetaceous, and zygomycetaceous macrofungi is presented for the state of Arizona. The checklist was compiled from records of Arizona fungi in scientific publications or herbarium databases. Additional records were obtained from a physical search of herbarium specimens in the University of Arizona’s Robert L. Gilbertson Mycological Herbarium and of the author’s personal herbarium. This publication represents the first comprehensive checklist of macrofungi for Arizona. In all probability, the checklist is far from complete as new species await discovery and some of the species listed are in need of taxonomic revision. The data presented here serve as a baseline for future studies related to fungal biodiversity in Arizona and can contribute to state or national inventories of biota. INTRODUCTION Arizona is a state noted for the diversity of its biotic communities (Brown 1994). Boreal forests found at high altitudes, the ‘Sky Islands’ prevalent in the southern parts of the state, and ponderosa pine (Pinus ponderosa P.& C. Lawson) forests that are widespread in Arizona, all provide rich habitats that sustain numerous species of macrofungi. Even xeric biomes, such as desertscrub and semidesert- grasslands, support a unique mycota, which include rare species such as Itajahya galericulata A. Møller (Long & Stouffer 1943b, Fig. 2c). Although checklists for some groups of fungi present in the state have been published previously (e.g., Gilbertson & Budington 1970, Gilbertson et al. 1974, Gilbertson & Bigelow 1998, Fogel & States 2002), this checklist represents the first comprehensive listing of all macrofungi in the kingdom Eumycota (Fungi) that are known from Arizona. -
The Macrofungi Checklist of Liguria (Italy): the Current Status of Surveys
Posted November 2008. Summary published in MYCOTAXON 105: 167–170. 2008. The macrofungi checklist of Liguria (Italy): the current status of surveys MIRCA ZOTTI1*, ALFREDO VIZZINI 2, MIDO TRAVERSO3, FABRIZIO BOCCARDO4, MARIO PAVARINO1 & MAURO GIORGIO MARIOTTI1 *[email protected] 1DIP.TE.RIS - Università di Genova - Polo Botanico “Hanbury”, Corso Dogali 1/M, I16136 Genova, Italy 2 MUT- Università di Torino, Dipartimento di Biologia Vegetale, Viale Mattioli 25, I10125 Torino, Italy 3Via San Marino 111/16, I16127 Genova, Italy 4Via F. Bettini 14/11, I16162 Genova, Italy Abstract— The paper is aimed at integrating and updating the first edition of the checklist of Ligurian macrofungi. Data are related to mycological researches carried out mainly in some holm-oak woods through last three years. The new taxa collected amount to 172: 15 of them belonging to Ascomycota and 157 to Basidiomycota. It should be highlighted that 12 taxa have been recorded for the first time in Italy and many species are considered rare or infrequent. Each taxa reported consists of the following items: Latin name, author, habitat, height, and the WGS-84 Global Position System (GPS) coordinates. This work, together with the original Ligurian checklist, represents a contribution to the national checklist. Key words—mycological flora, new reports Introduction Liguria represents a very interesting region from a mycological point of view: macrofungi, directly and not directly correlated to vegetation, are frequent, abundant and quite well distributed among the species. This topic is faced and discussed in Zotti & Orsino (2001). Observations prove an high level of fungal biodiversity (sometimes called “mycodiversity”) since Liguria, though covering only about 2% of the Italian territory, shows more than 36 % of all the species recorded in Italy. -
Boletus Edulis and Cistus Ladanifer: Characterization of Its Ectomycorrhizae, in Vitro Synthesis, and Realised Niche
UNIVERSIDAD DE MURCIA ESCUELA INTERNACIONAL DE DOCTORADO Boletus edulis and Cistus ladanifer: characterization of its ectomycorrhizae, in vitro synthesis, and realised niche. Boletus edulis y Cistus ladanifer: caracterización de sus ectomicorrizas, síntesis in vitro y área potencial. Dª. Beatriz Águeda Hernández 2014 UNIVERSIDAD DE MURCIA ESCUELA INTERNACIONAL DE DOCTORADO Boletus edulis AND Cistus ladanifer: CHARACTERIZATION OF ITS ECTOMYCORRHIZAE, in vitro SYNTHESIS, AND REALISED NICHE tesis doctoral BEATRIZ ÁGUEDA HERNÁNDEZ Memoria presentada para la obtención del grado de Doctor por la Universidad de Murcia: Dra. Luz Marina Fernández Toirán Directora, Universidad de Valladolid Dra. Asunción Morte Gómez Tutora, Universidad de Murcia 2014 Dª. Luz Marina Fernández Toirán, Profesora Contratada Doctora de la Universidad de Valladolid, como Directora, y Dª. Asunción Morte Gómez, Profesora Titular de la Universidad de Murcia, como Tutora, AUTORIZAN: La presentación de la Tesis Doctoral titulada: ‘Boletus edulis and Cistus ladanifer: characterization of its ectomycorrhizae, in vitro synthesis, and realised niche’, realizada por Dª Beatriz Águeda Hernández, bajo nuestra inmediata dirección y supervisión, y que presenta para la obtención del grado de Doctor por la Universidad de Murcia. En Murcia, a 31 de julio de 2014 Dra. Luz Marina Fernández Toirán Dra. Asunción Morte Gómez Área de Botánica. Departamento de Biología Vegetal Campus Universitario de Espinardo. 30100 Murcia T. 868 887 007 – www.um.es/web/biologia-vegetal Not everything that can be counted counts, and not everything that counts can be counted. Albert Einstein Le petit prince, alors, ne put contenir son admiration: -Que vous êtes belle! -N´est-ce pas, répondit doucement la fleur. Et je suis née meme temps que le soleil.. -
(Boletaceae, Basidiomycota) – a New Monotypic Sequestrate Genus and Species from Brazilian Atlantic Forest
A peer-reviewed open-access journal MycoKeys 62: 53–73 (2020) Longistriata flava a new sequestrate genus and species 53 doi: 10.3897/mycokeys.62.39699 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Longistriata flava (Boletaceae, Basidiomycota) – a new monotypic sequestrate genus and species from Brazilian Atlantic Forest Marcelo A. Sulzbacher1, Takamichi Orihara2, Tine Grebenc3, Felipe Wartchow4, Matthew E. Smith5, María P. Martín6, Admir J. Giachini7, Iuri G. Baseia8 1 Departamento de Micologia, Programa de Pós-Graduação em Biologia de Fungos, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, CEP: 50760-420, Recife, PE, Brazil 2 Kanagawa Prefectural Museum of Natural History, 499 Iryuda, Odawara-shi, Kanagawa 250-0031, Japan 3 Slovenian Forestry Institute, Večna pot 2, SI-1000 Ljubljana, Slovenia 4 Departamento de Sistemática e Ecologia/CCEN, Universidade Federal da Paraíba, CEP: 58051-970, João Pessoa, PB, Brazil 5 Department of Plant Pathology, University of Flori- da, Gainesville, Florida 32611, USA 6 Departamento de Micologia, Real Jardín Botánico, RJB-CSIC, Plaza Murillo 2, Madrid 28014, Spain 7 Universidade Federal de Santa Catarina, Departamento de Microbiologia, Imunologia e Parasitologia, Centro de Ciências Biológicas, Campus Trindade – Setor F, CEP 88040-900, Flo- rianópolis, SC, Brazil 8 Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Campus Universitário, CEP: 59072-970, Natal, RN, Brazil Corresponding author: Tine Grebenc ([email protected]) Academic editor: A.Vizzini | Received 4 September 2019 | Accepted 8 November 2019 | Published 3 February 2020 Citation: Sulzbacher MA, Orihara T, Grebenc T, Wartchow F, Smith ME, Martín MP, Giachini AJ, Baseia IG (2020) Longistriata flava (Boletaceae, Basidiomycota) – a new monotypic sequestrate genus and species from Brazilian Atlantic Forest. -
Chapter 1. Introduction
Chapter 1: Introduction Chapter 1. Introduction Research and ecological context Importance of the mutualistic symbiosis Truffle-like fungi are an important component in many terrestrial ecosystems. They provide a food resource for mycophagous (‘fungus-eating’) animals and are an essential symbiont for many plant species (Claridge 2002; Brundrett 2009). Most truffle-like fungi are considered ectomycorrhizal (EcM) in which the fungus hyphae penetrate the plant root structure and form a sheath (‘Hartig Net’) around plant root tips. This enables the exchange of water, minerals, and metabolites between fungus and plant (Nehls et al. 2010). The fungus can form extensive networks of mycelium in the soil extending the effective surface of the plant-host root system. EcM fungi can also confer resistance to parasites, predators, pathogens, and heavy-metal pollution, as well as the breakdown of inorganic substrates (Claridge 2002; Gadd 2007; Bonfante & Genre 2010). EcM fungi can reproduce through mycelia (vegetative) growth or through spores. Truffle-like EcM fungi form reproductive below-ground (hypogeous) fruit-bodies (sporocarps) in which spores are entirely or partly enclosed within fungal tissue of the sporocarp (‘sequestrate’), and often referred to as ‘truffles’. The sporocarps of these fungi (‘truffles’) generally require excavation and consumption by mycophagous mammals for spores to be liberated and dispersed to new locations (Johnson 1996; Bougher & Lebel 2001). In contrast, epigeous or ‘mushroom-like’ fungi produce stipitate above-ground sporocarps in which spores are not enclosed within fungal tissue and are actively or passively discharged into the surrounding environment. Consequently, truffle-like taxa are considered to have evolved to be reliant on mycophagous animals for their dispersal. -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
Long-Term Preservation of Arbuscular Mycorrhizal Fungi
Université catholique de Louvain Faculté d’ingénierie biologique, agronomique et environnementale Earth and Life Institute Pole of Applied Microbiology (ELIM) Laboratory of Mycology Long-term preservation of Arbuscular mycorrhizal fungi Thèse de doctorat présentée en vue de l’obtention du grade de Docteur en Sciences agronomiques et ingénierie biologique Ismahen Lalaymia Promoteurs: Prof. Stéphane Declerck (UCL, Belgique) Dr. Sylvie Cranenbrouck (UCL, Belgique) 2013 Université catholique de Louvain Faculté d’ingénierie biologique, agronomique et environnementale Earth and Life Institute Pole of Applied Microbiology (ELIM) Laboratory of Mycology Long-term preservation of Arbuscular mycorrhizal fungi Thèse de doctorat présentée en vue de l’obtention du grade de Docteur en Sciences agronomiques et ingénierie biologique Ismahen Lalaymia Promoteurs : Prof. S. Declerck (UCL, Belgique) Dr. S. Cranenbrouck (UCL, Belgique) Membres du Jury : Prof. Y. Larondelle (UCL, Belgique), Président Prof. A. Legreve (UCL, Belgique) Prof. P. de Vos (UGent, Belgique) Dr. B. Panis (KUL, Belgique) Louvain-La-Neuve, 2013 Acknowledgements First and foremost, I would like to express my deep gratitude to my promoter, Professor Stéphane Declerck, for the opportunity he gave me to accomplish this PhD. Thank you for guidance, enthusiastic supervision, your confidence in me and the useful critiques of this research work. I am grateful to Dr. Sylvie Cranenbrouck. Thank you Sylvie for your continuous encouragements and for the numerous stimulating discussions. Without your knowledge and help this study would not have been successful. I am thankful to the European Community for financing of the VALORAM project and for providing the financial means and laboratory facilities to complete this project. Thanks are also addressed to the people involved in the VALORAM project. -
MUSHROOMS of the OTTAWA NATIONAL FOREST Compiled By
MUSHROOMS OF THE OTTAWA NATIONAL FOREST Compiled by Dana L. Richter, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI for Ottawa National Forest, Ironwood, MI March, 2011 Introduction There are many thousands of fungi in the Ottawa National Forest filling every possible niche imaginable. A remarkable feature of the fungi is that they are ubiquitous! The mushroom is the large spore-producing structure made by certain fungi. Only a relatively small number of all the fungi in the Ottawa forest ecosystem make mushrooms. Some are distinctive and easily identifiable, while others are cryptic and require microscopic and chemical analyses to accurately name. This is a list of some of the most common and obvious mushrooms that can be found in the Ottawa National Forest, including a few that are uncommon or relatively rare. The mushrooms considered here are within the phyla Ascomycetes – the morel and cup fungi, and Basidiomycetes – the toadstool and shelf-like fungi. There are perhaps 2000 to 3000 mushrooms in the Ottawa, and this is simply a guess, since many species have yet to be discovered or named. This number is based on lists of fungi compiled in areas such as the Huron Mountains of northern Michigan (Richter 2008) and in the state of Wisconsin (Parker 2006). The list contains 227 species from several authoritative sources and from the author’s experience teaching, studying and collecting mushrooms in the northern Great Lakes States for the past thirty years. Although comments on edibility of certain species are given, the author neither endorses nor encourages the eating of wild mushrooms except with extreme caution and with the awareness that some mushrooms may cause life-threatening illness or even death.