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CICHLIFORMES: Cichlidae (part 3) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 6.0 - 30 April 2021 Order CICHLIFORMES (part 3 of 8) Family CICHLIDAE Cichlids (part 3 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Haplochromis through Konia) Haplochromis Hilgendorf 1888 haplo-, simple, proposed as a subgenus of Chromis with unnotched teeth (i.e., flattened and obliquely truncated teeth of H. obliquidens); Chromis, a name dating to Aristotle, possibly derived from chroemo (to neigh), referring to a drum (Sciaenidae) and its ability to make noise, later expanded to embrace cichlids, damselfishes, dottybacks and wrasses (all perch-like fishes once thought to be related), then beginning to be used in the names of African cichlid genera following Chromis (now Oreochromis) mossambicus Peters 1852 Haplochromis acidens Greenwood 1967 acies, sharp edge or point; dens, teeth, referring to its sharp, needle-like teeth Haplochromis adolphifrederici (Boulenger 1914) in honor explorer Adolf Friederich (1873-1969), Duke of Mecklenburg, leader of the Deutsche Zentral-Afrika Expedition (1907-1908), during which type was collected Haplochromis aelocephalus Greenwood 1959 aiolos, shifting, changing, variable; cephalus, head, referring to wide range of variation in head shape Haplochromis aeneocolor Greenwood 1973 aeneus, brazen, referring to “brassy appearance” or coloration of adult males, a possible double entendre (per Erwin Schraml) referring to both “dull bronze” color exhibited by some specimens and to what -
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UNIVERSITI PUTRA MALAYSIA ISOLATION, CHARACTERIZATION AND PATHOGENICITY OF EPIZOOTIC ULCERATIVE SYNDROME-RELATED Aphanomyces TOWARD AN IMPROVED DIAGNOSTIC TECHNIQUE SEYEDEH FATEMEH AFZALI FPV 2014 7 ISOLATION, CHARACTERIZATION AND PATHOGENICITY OF EPIZOOTIC ULCERATIVE SYNDROME-RELATED Aphanomyces TOWARD AN IMPROVED DIAGNOSTIC TECHNIQUE UPM By SEYEDEH FATEMEH AFZALI COPYRIGHT © Thesis Submitted to the School of Graduate Study, Universiti Putra Malaysia, in Fulfillment of the Requirement for the Degree of Doctor of Philosophy August 2014 i All material contained within the thesis, including without limitation text, logos, icons, photographs and all other artwork, is copyright material of Universiti Putra Malaysia unless otherwise stated. Use may be made of any material contained within the thesis for non-commercial purposes from the copyright holder. Commercial use of material may only be made with the express, prior, written permission of Universiti Putra Malaysia. Copyright © Universiti Putra Malaysia UPM COPYRIGHT © ii DEDICATION This dissertation is lovingly dedicated to my kind family. A special feeling of gratitude to my great parents who inspired my life through their gritty strength, enduring faith, and boundless love for family. My nice sisters and brother have never left my side and have supported me throughout the process. I also dedicate this work and give special thanks to my best friend “Hasti” for being there for me throughout the entire doctorate program. UPM COPYRIGHT © iii Abstract of thesis presented to the Senate of Universiti Putra Malaysia in fulfillment of the requirement for the degree of Doctor of Philosophy ISOLATION, CHARACTERIZATION AND PATHOGENICITY OF EPIZOOTIC ULCERATIVE SYNDROME-RELATED Aphanomyces TOWARD AN IMPROVED DIAGNOSTIC TECHNIQUE By SEYEDEH FATEMEH AFZALI August 2014 Chair: Associate Professor Hassan Hj Mohd Daud, PhD Faculty: Veterinary Medicine Epizootic ulcerative syndrome (EUS) is a seasonal and severely damaging disease in wild and farmed freshwater and estuarine fishes. -
Diversity and Risk Patterns of Freshwater Megafauna: a Global Perspective
Diversity and risk patterns of freshwater megafauna: A global perspective Inaugural-Dissertation to obtain the academic degree Doctor of Philosophy (Ph.D.) in River Science Submitted to the Department of Biology, Chemistry and Pharmacy of Freie Universität Berlin By FENGZHI HE 2019 This thesis work was conducted between October 2015 and April 2019, under the supervision of Dr. Sonja C. Jähnig (Leibniz-Institute of Freshwater Ecology and Inland Fisheries), Jun.-Prof. Dr. Christiane Zarfl (Eberhard Karls Universität Tübingen), Dr. Alex Henshaw (Queen Mary University of London) and Prof. Dr. Klement Tockner (Freie Universität Berlin and Leibniz-Institute of Freshwater Ecology and Inland Fisheries). The work was carried out at Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Germany, Freie Universität Berlin, Germany and Queen Mary University of London, UK. 1st Reviewer: Dr. Sonja C. Jähnig 2nd Reviewer: Prof. Dr. Klement Tockner Date of defense: 27.06. 2019 The SMART Joint Doctorate Programme Research for this thesis was conducted with the support of the Erasmus Mundus Programme, within the framework of the Erasmus Mundus Joint Doctorate (EMJD) SMART (Science for MAnagement of Rivers and their Tidal systems). EMJDs aim to foster cooperation between higher education institutions and academic staff in Europe and third countries with a view to creating centres of excellence and providing a highly skilled 21st century workforce enabled to lead social, cultural and economic developments. All EMJDs involve mandatory mobility between the universities in the consortia and lead to the award of recognised joint, double or multiple degrees. The SMART programme represents a collaboration among the University of Trento, Queen Mary University of London and Freie Universität Berlin. -
“Jumbo”: Representa Um Potencial Para Introdução De Espécies No Brasil?
Oecologia Australis 23(3):519-535, 2019 https://doi.org/10.4257/oeco.2019.2303.11 AQUARISMO “JUMBO”: REPRESENTA UM POTENCIAL PARA INTRODUÇÃO DE ESPÉCIES NO BRASIL? João Daniel Ferraz1,2*, Armando César Rodrigues Casimiro1,2, Alan Deivid Pereira1,2, Diego Azevedo Zoccal Garcia2, Lucas Ribeiro Jarduli2,3, André Lincoln Barroso Magalhães4 & Mário Luís Orsi2 1 Universidade Estadual de Londrina, Programa de Pós-Graduação em Ciências Biológicas, Rodovia Celso Garcia Cid, PR 445, Km 380, Campus Universitário, CP 10.011, CEP 86057-970, Londrina, PR, Brasil. 2 Universidade Estadual de Londrina, Laboratório de Ecologia de Peixes e Invasões Biológicas, Rodovia Celso Garcia Cid, PR 445, Km 380, Campus Universitário, CP 10.011, CEP 86057-970, Londrina, PR, Brasil. 3 Centro Universitário das Faculdades Integradas de Ourinhos, Rodovia BR 153, Km 338, CEP 19909-100, Bairro Água do Cateto, Ourinhos, SP, Brasil. 4 Universidade Federal de São João Del Rei, Programa de Pós-Graduação em Tecnologias para o Desenvolvimento Sustentável, Rod. MG 443, KM 7,CEP 36420-000, Fazenda do Cadete, Ouro Branco, MG, Brasil. E-mails: [email protected] (*autor correspondente); [email protected]; [email protected]; [email protected]; [email protected]; [email protected]; [email protected] RESUMO: O aquarismo é um hobby difundido mundialmente, com registros desde as civilizações antigas. No Brasil, a prática tem aumentado seu prestígio e representatividade. Dentre as modalidades do aquarismo de água doce, o “jumbo” tem se tornado popular, e sua prática tem gerado ampla divulgação via Internet. A modalidade se caracteriza pela escolha de espécies de peixes de médio a grande porte com comportamento agressivo e predatório, o que representa ameaça aos ambientes naturais principalmente como consequência do descarte inadequado das espécies. -
Optimisation of Common Snook Centropomus Undecimalis Broodstock Management
Optimisation of common snook Centropomus undecimalis broodstock management NICOLE RENEE RHODY May 2014 A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY INSTITUTE OF AQUACULTURE UNIVERSITY OF STIRLING I Nicole Rhody DECLARATION This thesis has been composed in its entirety by the candidate. Except where specifically acknowledged, the work described in this thesis has been conducted independently and has not been submitted for any other degree. CANDIDATE NAME: .............................................................. SIGNATURE: ............................................................... DATE: ................................................................ SUPERVISOR NAME: ............................................................... SIGNATURE: ................................................................ DATE: ................................................................ II Nicole Rhody ACKNOWLEDGEMENTS First and foremost I would like to thank my principle supervisor, Dr. Hervé Migaud, for his constant support, direction and encouragement throughout this venture. I am particularly grateful for the guidance, scientific prospective and constructive criticism you provided along the way. To Dr. Kevan Main, I would like to express my sincerest gratitude for her unwavering commitment to helping me on both a personal and professional level to accomplish the work presented in this dissertation. I would also like to convey my appreciation to Drs. Andrew Davie, John Taggart, Harry Grier, Nilli Zmora and Cecilia Puchulutegui -
Current Developments of Bacteriocins, Screening Methods and Their Application in Aquaculture and Aquatic Products
Biocatalysis and Agricultural Biotechnology 22 (2019) 101395 Contents lists available at ScienceDirect Biocatalysis and Agricultural Biotechnology journal homepage: http://www.elsevier.com/locate/bab Current developments of bacteriocins, screening methods and their application in aquaculture and aquatic products Jinsong Wang a,b,*,1, Shuwen Zhang b,1, Yujie Ouyang b, Rui Li b a Food College, Shanghai Ocean University, No.999, Huchenghuan Road, Nanhui New City, Shanghai, 201306, China b College of Bioengineering, Jingchu University of Technology, No.33, Xiangshan Road, Jingmen, 448000, China ARTICLE INFO ABSTRACT Keywords: The bacteriocins of lactic acid bacteria (LAB) is a kind of antibacterial peptide or protein synthesized by LAB in Bacteriocins vivo. They have been the focus of much research because LAB and their metabolic products are generally Lactic acid bacteria regarded as safe and have potential application in the aquaculture and aquatic products. At present, the dis Aquatic products covery of new bacteriocins involves complicated screening, identification, purification, and characterization Antimicrobial peptide processes which impact the application of these bacteriocins. This review summarizes the systematic classifi Bacteriocin applications cation of bacteriocins, especially the bacteriocins inhibiting Gram-negative and Gram-positive bacterium, and the species, genus, family and order of LAB. At the same time, the methods of screening of antimicrobial peptide production are expounded and bacteriocin applications of LAB in aquaculture and storage of aquatic products are described. All of these will provide the faster, easier, and more efficientnew antimicrobial explorations and basic knowledge for the development and applications of bacteriocins from LAB. 1. Introduction bacteria, including several aquatic products such as shellfish (Pinto, 2009), shrimp (Feliatra et al., 2018), fermented Fish (Wang et al., 2018). -
Clarias Macrocephalus Clarias Gariepinus
foods Article Occurrence and Development of Off-Odor Compounds in Farmed Hybrid Catfish (Clarias macrocephalus × Clarias gariepinus) Muscle during Refrigerated Storage: Chemical and Volatilomic Analysis Hatairad Phetsang 1 , Worawan Panpipat 1 , Atikorn Panya 2, Natthaporn Phonsatta 2 and Manat Chaijan 1,* 1 School of Agricultural Technology and Food Industry, Food Technology and Innovation Research Center of Excellence, Walailak University, Nakhon Si Thammarat 80160, Thailand; [email protected] (H.P.); [email protected] (W.P.) 2 Food Biotechnology Research Team, Functional Ingredients and Food Innovation Research Group, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phaholyothin Rd., Khlong Nueng, Khlong Luang, Pathumthani 12120, Thailand; [email protected] (A.P.); [email protected] (N.P.) * Correspondence: [email protected]; Tel.: +66-7567-2384; Fax: +66-7567-2302 Abstract: The goal of this study was to examine the changes in chemical parameters, major volatile compounds, and sensory aspects in farm-raised hybrid catfish (i.e., dorsal, lateral line and ven- tral muscles) during a 15-day period of refrigerated storage. Trichloroacetic acid-soluble peptides, free fatty acid, total volatile base-nitrogen (TVB-N), and non-heme iron levels in all muscles in- Citation: Phetsang, H.; Panpipat, W.; creased as storage time proceeded. The levels of trans-1,10-dimethyl-trans-9-decalol (geosmin) and Panya, A.; Phonsatta, N.; Chaijan, M. 2-methylisoborneol (2-MIB) were higher than their thresholds, which was connected to a stronger Occurrence and Development of earthy odor. The concentrations of geosmin and 2-MIB in all muscles increased, although there was Off-Odor Compounds in Farmed a consistent trend of earthy odor throughout storage; this phenomenon could be attributed to the Hybrid Catfish (Clarias macrocephalus masking effect of other off-odors. -
Territoriality and Landscape of Aggression
University of Louisville ThinkIR: The University of Louisville's Institutional Repository Electronic Theses and Dissertations 12-2013 Territoriality and landscape of aggression. Piyumika Sureshni Suriyampola University of Louisville Follow this and additional works at: https://ir.library.louisville.edu/etd Recommended Citation Suriyampola, Piyumika Sureshni, "Territoriality and landscape of aggression." (2013). Electronic Theses and Dissertations. Paper 1410. https://doi.org/10.18297/etd/1410 This Doctoral Dissertation is brought to you for free and open access by ThinkIR: The University of Louisville's Institutional Repository. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of ThinkIR: The University of Louisville's Institutional Repository. This title appears here courtesy of the author, who has retained all other copyrights. For more information, please contact [email protected]. TERRITORIALITY AND LANDSCAPE OF AGGRESSION By Piyumika Sureshni Suriyampola B.Sc. University of Peradeniya, 2006 M.S. University of Louisville, 2013 A Dissertation Submitted to the Faculty of the College of Arts and Sciences of the University of Louisville in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Department of Biology University of Louisville Louisville, Kentucky December 2013 Copyright 2013 by Piyumika Sureshni Suriyampola All rights reserved TERRITORIALITY AND LANDSCAPE OF AGGRESSION By Piyumika Sureshni Suriyampola B.Sc. University of Peradeniya, 2006 -
DNA Barcoding of Catfish: Species Authentication and Phylogenetic Assessment
DNA Barcoding of Catfish: Species Authentication and Phylogenetic Assessment Li Lian Wong1, Eric Peatman1, Jianguo Lu1, Huseyin Kucuktas1, Shunping He2, Chuanjiang Zhou2,3, Uthairat Na-nakorn4, Zhanjiang Liu1* 1 Department of Fisheries and Allied Aquacultures, Aquatic Genomics Unit, Auburn University, Auburn, Alabama, United States of America, 2 Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei Province, China, 3 School of Life Science, Southwest University, Beibei, Chongqing, China, 4 Department of Aquaculture, Faculty of Fisheries, Kasetsart University, Bangkok, Thailand Abstract As the global market for fisheries and aquaculture products expands, mislabeling of these products has become a growing concern in the food safety arena. Molecular species identification techniques hold the potential for rapid, accurate assessment of proper labeling. Here we developed and evaluated DNA barcodes for use in differentiating United States domestic and imported catfish species. First, we sequenced 651 base-pair barcodes from the cytochrome oxidase I (COI) gene from individuals of 9 species (and an Ictalurid hybrid) of domestic and imported catfish in accordance with standard DNA barcoding protocols. These included domestic Ictalurid catfish, and representative imported species from the families of Clariidae and Pangasiidae. Alignment of individual sequences from within a given species revealed highly consistent barcodes (98% similarity on average). These alignments allowed the development and analyses of consensus barcode sequences for each species and comparison with limited sequences in public databases (GenBank and Barcode of Life Data Systems). Validation tests carried out in blinded studies and with commercially purchased catfish samples (both frozen and fresh) revealed the reliability of DNA barcoding for differentiating between these catfish species. -
Probiotic Effects of a Novel Strain, Acinetobacter KU011TH, on The
microorganisms Article Probiotic Effects of a Novel Strain, Acinetobacter KU011TH, on the Growth Performance, Immune Responses, and Resistance against Aeromonas hydrophila of Bighead Catfish (Clarias macrocephalus Günther, 1864) Anurak Bunnoy 1 , Uthairat Na-Nakorn 2 and Prapansak Srisapoome 1,* 1 Laboratory of Aquatic Animal Health Management, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, Thailand; [email protected] 2 Laboratory of Aquatic Animal Genetics, Department of Aquaculture, Faculty of Fisheries, Kasetsart University, 50 Paholayothin Rd, Ladyao, Chatuchak, Bangkok 10900, Thailand; ffi[email protected] * Correspondence: ffi[email protected] Received: 19 September 2019; Accepted: 23 November 2019; Published: 25 November 2019 Abstract: In the present study, the novel probiotic strain Acinetobacter KU011TH with an evident lack of pathogenicity in catfish was experimented. Three practical administration routes, namely, feed additive (FD), water-soluble additive (SOL), and a combination route (FD+SOL), were applied in two sizes of catfish. After 120 days of FD+SOL administration, catfish fingerlings (15 g) exhibited a significant improvement in all tested growth performance parameters. For 15- and 30-day applications at the juvenile stage (150 g), phagocytic activity, phagocytic index, lysozyme activity, respiratory burst activity, alternative complement pathway, and bactericidal activity were significantly increased. Furthermore, probiotic-administered bighead catfish exhibited an upregulated expression of several immune-related genes in tested organs. Significant colonization by Acinetobacter KU011TH in rearing water and on skin and gills was observed among experimental groups. Histological analysis clearly indicated enhanced physical characteristics of skin mucosal immunity in the treated groups. No histopathological changes in the gills, skin, intestine or liver were observed among the fish groups. -
Investigating the Long-Chain Polyunsaturated Fatty Acid
INVESTIGATING THE LONG-CHAIN POLYUNSATURATED FATTY ACID BIOSYNTHESIS OF THE AFRICAN CATFISH CLARIAS GARIEPINUS (BURCHELL, 1822) THESIS SUBMITTED TO THE UNIVERSITY OF STIRLING FOR THE DEGREE OF DOCTOR OF PHILOSOPHY by ANGELA O. OBOH FEBRUARY 2018 INSTITUTE OF AQUACULTURE, SCHOOL OF NATURAL SCIENCES, UNIVERSITY OF STIRLING, STIRLING, SCOTLAND, UK DECLARATION This thesis has been composed in its entirety by the candidate. Except where specifically acknowledged, the work described in this thesis has been conducted independently and and has not been submitted for any other degree. Name: Angela O. Oboh Sign: Date: Name: Óscar Monroig Sign: Date: Name: Douglas R. Tocher Sign: Date: 1 ACKNOWLEDGEMENTS I would like to express my gratitude to my supervisors Dr Óscar Monroig and Prof. Douglas R. Tocher for their guidance, encouragement and help throughout this project. I am especially indebted to Dr. Óscar Monroig, who taught me most of the experimental methodologies used in this work. I would like to thank Dr. Monica Betancor and Dr Naoki Kabeya who also helped me understand aspects of the laboratory work and for their contributions to the success of this project. I would like to express my appreciation to Dr Juan Carlos Navarro (Instituto de Acuicultura Torre de la Sal (CSIC), Spain) for his support in analysing the fatty acids of the yeast samples reported in Chapter 4 of this thesis. I am thankful to Prof. Brett Glencross for his time and support as well. I am grateful to the staff of the molecular and nutrition laboratories and the tropical aquarium including Dr John Taggart, Mrs Jacquie Ireland, Mr Keith Ransom, Mr. -
Garry Bernacsek
Fisheries Research and Development in the Mekong Region Volume 12, No. 2 ISSN 0859-290X August 2006 INSIDE Fish migration studies using biotelemetry Scaling-up community fisheries in Cambodia Management needs for Lao-Cambodian fishery Cambodia’s National Fish Day Fish breeding in Lao PDR Catch and Culture is published three times a year by the Mekong River Commission Secretariat in Vientaine, Lao PDR and distributed to over 650 subscribers around the world. Free email subscriptions to Catch and Culture are available through the MRC website, www.mrcmekong.org For information on the cost of hard-copy subscriptions, contact the MRC's Documentation Centre by email to [email protected] Contributions to Catch and Culture may be sent to [email protected] © Mekong River Commission 2006 Editorial panel Dr Chris Barlow, Fisheries Programme Manager Dr Suchart Ingthamjitr, Fisheries Programme Officer Khamtanh Vatthanatham, Fisheries Programme Officer Virginia Addison, MRC Secretariat Communications Officer Editor: Peter Starr Design and cover illustration: Phannavanh Anoulack All stories by Peter Starr unless otherwise noted. 2 August 2006 Catch and Culture Volume 12, No. 2 Editorial Editorial For many years the migratory habits of some of the Mekong's largest fish have fascinated scientists. Now a group of researchers from the Mekong Wetlands Biodiversity Programme (of which the Mekong River Commission is a partner) and the National Geographic Society have joined forces to undertake a year- long study into these fishes and their migration paths and spawning sites. But there is something special about this study - it will be the first attempt to use underwater biotelemetry to track fish movements in the Mekong.