Microstoma Longipilum Sp. Nov. (Sarcoscyphaceae, Pezizales)

Total Page:16

File Type:pdf, Size:1020Kb

Microstoma Longipilum Sp. Nov. (Sarcoscyphaceae, Pezizales) Mycoscience VOL.62 (2021) 217-223 Short communication Microstoma longipilum sp. nov. (Sarcoscyphaceae, Pezizales) from Japan Yukito Tochiharaa, b, *, Tomoya Hiraoc, Muneyuki Ohmaed, Kentaro Hosakab, and Tsuyoshi Hosoyab a Department of Biological Sciences, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo, Tokyo 113-0033, Japan b Department of Botany, National Museum of Nature and Science, 4-1-1 Amakubo, Tsukuba, Ibaraki 305-0005, Japan c Mycologist Group in Okayama, 554-10 Tsubue, Kurashiki, Okayama 710-0034, Japan d Edible Mushrooms Institute, Hokken Co. Ltd., 1296-4, Oyamadashimogo, Nakagawa, Nasu, Tochigi 324-0602, Japan ABSTRACT Microstoma longipilum sp. nov. collected from two localities in Japan is described. It is characterized by long apothecial hairs and salmon pink discs. Molecular phylogenetic analyses supported the novelty of the fungus. We additionally reported the overlooked morphology of hyphal mats, conidiogenous cells produced directly from ascospores, and conidia. With the addition of M. longipilum, now six species of Microstoma are documented in Japan. Keywords: ITS-5.8S, mycobiota, new species, phylogeny Article history: Received 4 November 2020, Revised 14 March 2021, Accepted 15 March 2021, Available online 20 July 2021. The genus Microstoma Bernstein (Sarcoscyphaceae, Pezizales) is To obtain isolates, a piece of an apothecium was pasted under characterized by long stipes, white-hairy receptacles, orange to red the lid of a Petri dish so that ascospores could be freely discharged discs, gelatinized ectal excipulum and ascospores with smooth sur- onto potato dextrose agar (PDA; Nissui, Tokyo, Japan). Germinated faces (Otani, 1980). Seven species have been differentiated in the ascospores were transferred to PDA slants to establish pure isolates. genus: M. aggregatum Otani, M. apiculosporum Yei Z. Wang, M. Isolates were deposited in the NITE Biological Resource Center camerunense Douanla-Meli, M. floccosum (Sacc.) Raitv., M. macros- (NBRC), Kisarazu, Japan. To observe ascospore germination, asco- porum (Y. Otani) Y. Harada & S. Kudo, M. protractum (Fr.) spores were also discharged onto corn meal agar (CMA; Nissui), Kanouse, and M. radicatum T.Z. Liu, Wulantuya & W.Y. Zhuang stored at 20 °C, and observed after 12 h. Pieces of medium with (Liu, Wulantuya, & Zhuang, 2018; Ohmae, Yamamoto, & Orihara, ascospores were then cut out using sterilized scalpels, transferred 2020). In Japan, M. aggregatum, M. apiculosporum, M. floccosum, into new Petri dishes, immersed in tap water at 20 °C, and exam- M. macrosporum, and M. protractum have been reported (Katumo- ined after 12 h. to, 2010; Ohmae et al., 2020). The germination of ascospores and micromorphological charac- In 2014, the second author of the present study collected a spec- teristics of the apothecia were examined using cotton blue (Wako imen of Microstoma characterized by unique morphological fea- Pure Chemical Industries, Osaka, Japan) dissolved in water (CBW) tures in a primeval forest of Fagus crenata Blume in Maniwa, or tap water as a mounting fluid in the living state using a BX51 Okayama. Thereafter specimens of the same fungus were collected microscope equipped with a Nomarski interference contrast device yearly from the same locality. In 2020, a new locality of the fungus (Olympus, Tokyo, Japan). To check the ascal iodine reaction, Mel- was found in a forest dominated by broad-leaved trees (not includ- zer’s reagent (MLZ) was used. To confirm the swelling of asco- ing Fagus spp.) in Yamakita, Kanagawa. The fungus resembled M. spores and dissolution of glassy materials of hairs, 3% or 10% (w/v; aggregatum in that it had aggregated apothecia like colonial corals the same applied for all ‘%’ described below for concentrations of but differed from it by having much longer excipular hairs. In this solutions) potassium hydroxide (KOH) aqueous solution was used. study, we report the fungus as a new species to science based on Ascospore sizes were recorded both in the living state (= just after morphology and molecular phylogeny. immersed in CBW) and in the dead state (= 6 h after immersed in Some fresh specimens of the fungus were used to establish cul- MLZ) and were described in the following order: variation of tures, and others were air-dried for 1 wk at 20 °C and deposited in length and width (arithmetic mean of length and width ± standard the mycological herbarium of the National Museum of Nature and deviation), variation of Q (arithmetic mean of Q ± standard devia- Science, Tsukuba, Japan (TNS) and the Kanagawa Prefectural Mu- tion). Q is the ratio of length/width. seum of Natural History, Odawara, Japan (KPM). Molecular phylogenetic analyses were conducted including oth- er species of the genus Microstoma using the internal transcribed * Corresponding author. spacer region of nuclear ribosomal DNA containing partial ITS1- E-mail: [email protected] 5.8S-ITS2 (ITS-5.8S). For the five species of Microstoma known in This is an open-access paper distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivative 4.0 international license (CC BY-NC-ND 4.0: https://creativecommons.org/licenses/by-nc-nd/4.0/). doi: 10.47371/mycosci.2021.03.003 ― 217 ― Y. Tochihara et al. / Mycoscience VOL.62 (2021) 217-223 Japan, sequences were derived from specimens at the TNS herbari- est-NG 0.1.6 (Darriba et al., 2019) based on Akaike’s information um. DNA was extracted from mycelia cultivated on 2% (w/v) malt criterion. MP analysis was conducted using MEGA X (Kumar, extract broth (BactoTM Malt Extract; Thermo Fisher Scientific, Stecher, Li, Knyaz, & Tamura, 2018). Gaps and missing data were Waltham, MA, USA) following the modified CTAB method (Hosa- eliminated. A heuristic search was carried out under the tree bisec- ka & Castellano, 2008; Tochihara & Hosoya, 2019). When isolates tion reconnection branch swapping (TBR) algorithm with search were not available, DNA was extracted from pieces of dried apoth- level 2, in which the initial trees were obtained by the random ad- ecia using the same method. The ITS-5.8S region was then ampli- dition of sequences (10 replicates). Branch support was evaluated fied, sequenced, and aligned following procedures described by by 1,000 bootstrap replications. Phylogenetic trees were illustrated Tochihara and Hosoya (2019). Aligned sequences were deposited using FigTree 1.4.4 (Rambaut, 2018) based on the ML and MP anal- in the DNA Data Bank of Japan (DDBJ) (Table 1). Additionally, yses. The ultimate sequence matrix and ML best-scored tree were sequences > 400 bp derived from non-Japanese Microstoma sam- registered to TreeBase (http://purl.org/phylo/treebase/phylows/ ples were obtained from GenBank and added to the phylogenetic study/TB2:S26996). analyses. Sarcoscypha occidentalis (Schwein.) Sacc. and S. tataken- sis Yei Z. Wang & Cheng L. Huang were selected as the outgroup Taxonomy (Table 1). The obtained sequences (Table 1) were aligned using MAFFT 7 Microstoma longipilum Tochihara, T. Hirao & Hosoya, sp. nov. (Katoh & Standley, 2013) under the Q-INS-i option and manually Figs. 1, 2. edited. Molecular phylogenetic analyses were performed based on MycoBank no.: MB 836783. the maximum likelihood (ML) and the maximum parsimony (MP) methods. ML analysis was conducted using RAxML-NG 0.9.0 (Ko- Diagnosis: Characterized by aggregated apothecia, long acute zlov, Darriba, Flouri, Morel, & Stamatakis, 2019) with 1,000 boot- hairs, and salmon pink to pale orange discs. strap replications after suitable model estimation using Modelt- Holotype: JAPAN, Okayama, Maniwa, on rotten wood of Fagus Table 1. Taxa analyzed in molecular phylogenetic analyses. Isolates ITS GenBank Taxon Specimen no. Locality Coll. Date (NBRC) Accession no. Microstoma aggregatum TNS-F-61614 JAPAN, Fukushima, Kawauchi 2005/10/1 - LC584234 M. aggregatum TNS-F-80795 JAPAN, Fukushima, Kawauchi 2017/10/6 - LC584235 M. aggregatum TNS-F-81070 JAPAN, Hokkaido, Asahikawa, Mt. Tosshozan (Type 2017/10/6 - LC584236 Locality) M. aggregatum TNS-F-81149 JAPAN, Fukushima, Kawauchi 2017/9/9 - LC584237 M. aggregatum TNS-F-88858 JAPAN, Hokkaido, Chitose 2019/9/22 - LC584238 M. apiculosporum TNS-F-37021 JAPAN, Ehime, Ozu 2010/10/12 114763 LC584239 M. apiculosporum TNS-F-45127 JAPAN, Miyazaki, Kobayashi 2011/10/24 - LC584240 M. apiculosporum KPM-NC 28117 JAPAN, Ibaraki, Kasama 2019/11/4 114652 LC584241 M. floccosum FLAS-F-65620 USA, Minnesota, Rice, Nerstrand Big Woods State Park 2013/6/29 - MT3739221 M. floccosum 420526MF0271 CHINA, Hubei - - MH1420201 M. floccosum FH K. Griffith MEXICO - - AF3940451 M. floccosum FH K. Griffith MEXICO - - AF3940461 M. floccosum - USA, Pennsylvania - - AF0263091 M. floccosum TNS-F-56039 JAPAN, Nagano, Ueda 1991/6/21 - LC584242 M. floccosum TNS-F-56212 JAPAN, Kanagawa, Yokosuka 1992/5/29 - LC584243 M. floccosum TNS-F-56670 JAPAN, Aomori, Aomori 1994/5/7 - LC584244 M. floccosum TNS-F-41525 JAPAN, Ibaraki, Daigo 2011/7/16 - LC584245 M. floccosum TNS-F-66316 JAPAN, Fukushima, Iwaki 2014/6/22 - LC584246 M. floccosum TNS-F-88714 JAPAN, Saga, Kashima 2019/6/14 - LC584247 M. longipilum TNS-F-61424 JAPAN, Okayama, Maniwa 2014/7/19 110694 LC584248 M. longipilum TNS-F-61946 JAPAN, Okayama, Maniwa 2015/7/22 114764 LC584249 (holotype) M. longipilum TNS-F-65705 JAPAN, Okayama, Maniwa 2016/7/10 114765 LC584250 M. longipilum TNS-F-60527 JAPAN, Okayama, Maniwa 2020/7/8 - LC584251 M. longipilum TNS-F-60530/ JAPAN, Kanagawa, Yamakita 2020/7/15 - LC584252 KPM-NC 28281 M. radicatum CFSZ 10833 CHINA, Inner Mongolia 2016/5/26 - MG8452301 M. radicatum CFSZ 10833 CHINA, Inner Mongolia 2016/5/27 - MG8452311 M. radicatum CFSZ 10833 CHINA, Inner Mongolia 2016/5/27 - MG8452321 M. macrosporum TNS-F-15609 JAPAN, Fukushima, Yanaizu 2007/4/10 114761 LC584253 M. macrosporum TNS-F-13589 JAPAN, Hyogo, Shiso 2007/3/31 - LC584254 M. macrosporum TNS-F-39247 JAPAN, Hokkaido, Kamikawa 2011/5/11 - LC584255 M. macrosporum TNS-F-57413 JAPAN, Fukushima, Kitakata 2000/4/8 - LC584256 M. macrosporum TNS-F-80334 JAPAN, Niigata, Yahiko 2017/4/1 - LC584257 M.
Recommended publications
  • Museum, University of Bergen, Norway for Accepting The
    PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 6, 4, pp. 439-443 (1972) The Suboperculate ascus—a review Finn-Egil Eckblad Botanical Museum, University of Bergen, Norway The suboperculate nature of the asci of the Sarcoscyphaceae is discussed, that it does in its and further and it is concluded not exist original sense, that the Sarcoscyphaceae is not closely related to the Sclerotiniaceae. The question of the precise nature ofthe ascus in the Sarcoscyphaceae is important in connection with the of the the The treatment taxonomy of Discomycetes. family has been established the Sarcoscyphaceae as a highranking taxon, Suboperculati, by Le Gal (1946b, 1999), on the basis of its asci being suboperculate. Furthermore, the Suboperculati has beenregarded as intermediatebetween the rest of the Operculati, The Pezizales, and the Inoperculati, especially the order Helotiales, and its family Sclerotiniaceae (Le Gal, 1993). Recent views on the taxonomie position of the Sarcoscyphaceae are given by Rifai ( 1968 ), Eckblad ( ig68 ), Arpin (ig68 ), Kim- brough (1970) and Korf (igyi). The Suboperculati were regarded by Le Gal (1946a, b) as intermediates because had both the beneath they operculum of the Operculati, and in addition, it, some- ofthe of the In the the thing pore structure Inoperculati. Suboperculati pore struc- to ture is said take the form of an apical chamberwith an internal, often incomplete within Note this ring-like structure it. that in case the spores on discharge have to travers a double hindrance, the internal ring and the circular opening, and that the diameters of these obstacles are both smaller than the smallest diameterof the spores.
    [Show full text]
  • Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
    mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected.
    [Show full text]
  • Ascomyceteorg 06-05 Ascomyceteorg
    “The story so far...” An Interim Bibliography of Hans-Otto Baral for the Years 1981-2014 Martin BEMMANN Ascomycete.org, 6 (5) : 95-98. Décembre 2014 Mise en ligne le 18/12/2014 Hans-Otto Baral, aka “Zotto”, has contributed a vast amount of pa- BARAL H.-O. 1987. — Der Apikalapparat der Helotiales. Eine lichtmi- pers and digital publications which have inspired not only his aca- kroskopische Studie über Arten mit Amyloidring. Zeitschrift für demic colleagues but also the community of amateur mycologists, Mykologie, 53 (1): 119-135. whose efforts he has included in his ascomycete research for de- [http://www.dgfm-ev.de/sites/default/files/ZM531119Baral.pdf] cades, thus helping stimulate their own work. This compilation of BARAL H.-O. 1989. — Beiträge zur Taxonomie der Discomyceten I. his publications and ephemeral works to date is also intended as a Zeitschrift für Mykologie, 55 (1): 119-130. guide for all those who are unaware of its extent, and includes keys [http://www.dgfm-ev.de/sites/default/files/ZM551119Baral.pdf] and some otherwise unpublished papers shared on the DVD “In Vivo BARAL H.-O. 1989. — Beiträge zur Taxonomie der Discomyceten II. Veritas 2005”. Die Calycellina-Arten mit 4sporigen Asci. Beiträge zur Kenntnis der The form “H.-O.” Baral as opposed to “H. O.” Baral has been used Pilze Mitteleuropas, 5: 209-236. consistently throughout, though it varies in the different publica- BARAL H.-O. 1992. — Vital versus herbarium taxonomy: morphologi- tions. Only names of genera and species are set in italics even if this cal differences between living and dead cells of Ascomycetes, and deviates from the original titles.
    [Show full text]
  • Plant Life Magill’S Encyclopedia of Science
    MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D.
    [Show full text]
  • Sarcoscypha Austriaca (O
    © Miguel Ángel Ribes Ripoll [email protected] Condiciones de uso Sarcoscypha austriaca (O. Beck ex Sacc.) Boud., (1907) COROLOGíA Registro/Herbario Fecha Lugar Hábitat MAR-0704007 48 07/04/2007 Gradátila, Nava (Asturias) Sobre madera descompuesta no Leg.: Miguel Á. Ribes 241 m 30T TP9601 identificada, entre musgo Det.: Miguel Á. Ribes TAXONOMíA • Basiónimo: Peziza austriaca Beck 1884 • Posición en la clasificación: Sarcoscyphaceae, Pezizales, Pezizomycetidae, Pezizomycetes, Ascomycota, Fungi • Sinónimos: o Lachnea austriaca (Beck) Sacc., Syll. fung. (Abellini) 8: 169 (1889) o Molliardiomyces coccineus Paden [as 'coccinea'], Can. J. Bot. 62(3): 212 (1984) DESCRIPCIÓN MACRO Apotecios profundamente cupuliformes de hasta 5 cm de diámetro. Himenio liso de color rojo intenso, casi escarlata. Excípulo blanquecino en ejemplares jóvenes, luego rosado y finalmente parduzco, velloso. Margen blanco, excedente y velutino. Pie muy desarrollado, incluso de mayor longitud que el diámetro del sombrero, blanquecino, tenaz y atenuado hacia la base. Sarcoscypha austriaca 070407 48 Página 1 de 5 DESCRIPCIÓN MICRO 1. Ascas octospóricas, monoseriadas, no amiloides Sarcoscypha austriaca 070407 48 Página 2 de 5 2. Esporas elipsoidales, truncadas en los polos, con numerosas gútulas de tamaño medio y normalmente agrupadas en los extremos, a veces con pequeños apéndices gelatinosos en los polos (sólo en material vivo). En apotecios viejos las esporas germinan por medio de 1-4 conidióforos formando conidios elipsoidales multigutulados Medidas esporas (400x, material fresco) 25.4 [29.8 ; 32.5] 36.9 x 10.8 [13 ; 14.3] 16.5 Q = 1.6 [2.1 ; 2.5] 3.1 ; N = 19 ; C = 95% Me = 31.15 x 13.63 ; Qe = 2.32 3.
    [Show full text]
  • Contribution to the Study of Neotropical Discomycetes: a New Species of the Genus Geodina (Geodina Salmonicolor Sp
    Mycosphere 9(2): 169–177 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/2/1 Copyright © Guizhou Academy of Agricultural Sciences Contribution to the study of neotropical discomycetes: a new species of the genus Geodina (Geodina salmonicolor sp. nov.) from the Dominican Republic Angelini C1,2, Medardi G3, Alvarado P4 1 Jardín Botánico Nacional Dr. Rafael Ma. Moscoso, Santo Domingo, República Dominicana 2 Via Cappuccini 78/8, 33170 (Pordenone) 3 Via Giuseppe Mazzini 21, I-25086 Rezzato (Brescia) 4 ALVALAB, La Rochela 47, E-39012 Santander, Spain Angelini C, Medardi G, Alvarado P 2018 - Contribution to the study of neotropical discomycetes: a new species of the genus Geodina (Geodina salmonicolor sp. nov.) from the Dominican Republic. Mycosphere 9(2), 169–177, Doi 10.5943/mycosphere/9/2/1 Abstract Geodina salmonicolor sp. nov., a new neotropical / equatorial discomycetes of the genus Geodina, is here described and illustrated. The discovery of this new entity allowed us to propose another species of Geodina, until now a monospecific genus, and produce the first 28S rDNA genetic data, which supports this species is related to genus Wynnea in the Sarcoscyphaceae. Key-words – 1 new species – Ascomycota – Sarcoscyphaceae – Sub-tropical zone Caribbeans – Taxonomy Introduction A study started more than 10 years ago in the area of Santo Domingo (Dominican Republic) by one of the authors allowed us to identify several interesting fungal species, both Basidiomycota and Ascomycota. Angelini & Medardi (2012) published a first report of ascomycetes in which 12 lignicolous species including discomycetes and pyrenomycetes were described and illustrated in detail, also delineating the physical and botanical characteristics of the research area.
    [Show full text]
  • The Fungi of Slapton Ley National Nature Reserve and Environs
    THE FUNGI OF SLAPTON LEY NATIONAL NATURE RESERVE AND ENVIRONS APRIL 2019 Image © Visit South Devon ASCOMYCOTA Order Family Name Abrothallales Abrothallaceae Abrothallus microspermus CY (IMI 164972 p.p., 296950), DM (IMI 279667, 279668, 362458), N4 (IMI 251260), Wood (IMI 400386), on thalli of Parmelia caperata and P. perlata. Mainly as the anamorph <it Abrothallus parmeliarum C, CY (IMI 164972), DM (IMI 159809, 159865), F1 (IMI 159892), 2, G2, H, I1 (IMI 188770), J2, N4 (IMI 166730), SV, on thalli of Parmelia carporrhizans, P Abrothallus parmotrematis DM, on Parmelia perlata, 1990, D.L. Hawksworth (IMI 400397, as Vouauxiomyces sp.) Abrothallus suecicus DM (IMI 194098); on apothecia of Ramalina fustigiata with st. conid. Phoma ranalinae Nordin; rare. (L2) Abrothallus usneae (as A. parmeliarum p.p.; L2) Acarosporales Acarosporaceae Acarospora fuscata H, on siliceous slabs (L1); CH, 1996, T. Chester. Polysporina simplex CH, 1996, T. Chester. Sarcogyne regularis CH, 1996, T. Chester; N4, on concrete posts; very rare (L1). Trimmatothelopsis B (IMI 152818), on granite memorial (L1) [EXTINCT] smaragdula Acrospermales Acrospermaceae Acrospermum compressum DM (IMI 194111), I1, S (IMI 18286a), on dead Urtica stems (L2); CY, on Urtica dioica stem, 1995, JLT. Acrospermum graminum I1, on Phragmites debris, 1990, M. Marsden (K). Amphisphaeriales Amphisphaeriaceae Beltraniella pirozynskii D1 (IMI 362071a), on Quercus ilex. Ceratosporium fuscescens I1 (IMI 188771c); J1 (IMI 362085), on dead Ulex stems. (L2) Ceriophora palustris F2 (IMI 186857); on dead Carex puniculata leaves. (L2) Lepteutypa cupressi SV (IMI 184280); on dying Thuja leaves. (L2) Monographella cucumerina (IMI 362759), on Myriophyllum spicatum; DM (IMI 192452); isol. ex vole dung. (L2); (IMI 360147, 360148, 361543, 361544, 361546).
    [Show full text]
  • Preliminary Classification of Leotiomycetes
    Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades.
    [Show full text]
  • MYCOTAXON Volume 89(2), Pp
    MYCOTAXON Volume 89(2), pp. 277-281 April-June 2004 A note on some morphological features of Chorioactis geaster (Pezizales, Ascomycota) DONALD H. PFISTER dpfi[email protected] Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Ave., Cambridge, MA 02138, USA Shuichi Kur ogi Miyazaki Museum, 2-4-4 Jingu, Miyazaki City 7880-0053, Japan Abstract–A study of Chorioactis geaster (Sarcosomataceae) has shown the presence of several unreported or unconfirmed characters for this unusual and rare operculate discomycete. The ascospores are ornamented, they mature more or less simultaneously in all asci of a single ascoma, and asci have a thin hyphal base. The species is compared with species of the genera Cookeina and Microstoma (Sarcoscyphaceae) that also have this character. SEM shows open asci have a two-layered opercular region confirming TEM reports of differentiated wall layering in this region of the ascus. These features are discussed and the isolated systematic position of Chorioactis suggested by previous studies is confirmed. Key words–Ascus morphology, ascospore maturation, spore ornamentation Introduction Recently we showed that Chorioactis geaster (Peck) Kupfer ex Eckblad populations in Japan and North America represent distinct but closely related lineages. Molecular clock estimates suggest that they have probably been separate for at least 19 million years (Peterson et al. 2004). In the course of that study we examined a number of collections and determined that morphologically we could not distinguish the North American and Japanese collections. Our detailed studies, however, uncovered morphological features of the species that had not been noted previously. These observations are reported here.
    [Show full text]
  • The Phylogeny of Plant and Animal Pathogens in the Ascomycota
    Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus.
    [Show full text]
  • Shropshire Fungus Checklist 2010
    THE CHECKLIST OF SHROPSHIRE FUNGI 2011 Contents Page Introduction 2 Name changes 3 Taxonomic Arrangement (with page numbers) 19 Checklist 25 Indicator species 229 Rare and endangered fungi in /Shropshire (Excluding BAP species) 230 Important sites for fungi in Shropshire 232 A List of BAP species and their status in Shropshire 233 Acknowledgements and References 234 1 CHECKLIST OF SHROPSHIRE FUNGI Introduction The county of Shropshire (VC40) is large and landlocked and contains all major habitats, apart from coast and dune. These include the uplands of the Clees, Stiperstones and Long Mynd with their associated heath land, forested land such as the Forest of Wyre and the Mortimer Forest, the lowland bogs and meres in the north of the county, and agricultural land scattered with small woodlands and copses. This diversity makes Shropshire unique. The Shropshire Fungus Group has been in existence for 18 years. (Inaugural meeting 6th December 1992. The aim was to produce a fungus flora for the county. This aim has not yet been realised for a number of reasons, chief amongst these are manpower and cost. The group has however collected many records by trawling the archives, contributions from interested individuals/groups, and by field meetings. It is these records that are published here. The first Shropshire checklist was published in 1997. Many more records have now been added and nearly 40,000 of these have now been added to the national British Mycological Society’s database, the Fungus Record Database for Britain and Ireland (FRDBI). During this ten year period molecular biology, i.e. DNA analysis has been applied to fungal classification.
    [Show full text]
  • Characterizing the Assemblage of Wood-Decay Fungi in the Forests of Northwest Arkansas
    Journal of Fungi Article Characterizing the Assemblage of Wood-Decay Fungi in the Forests of Northwest Arkansas Nawaf Alshammari 1, Fuad Ameen 2,* , Muneera D. F. AlKahtani 3 and Steven Stephenson 4 1 Department of Biological Sciences, University of Hail, Hail 81451, Saudi Arabia; [email protected] 2 Department of Botany & Microbiology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia 3 Biology Department, College of Science, Princess Nourah Bint Abdulrahman University, Riyadh 11564, Saudi Arabia; [email protected] 4 Department of Biological Sciences, University of Arkansas, Fayetteville, AR 72701, USA; [email protected] * Correspondence: [email protected] Abstract: The study reported herein represents an effort to characterize the wood-decay fungi associated with three study areas representative of the forest ecosystems found in northwest Arkansas. In addition to specimens collected in the field, small pieces of coarse woody debris (usually dead branches) were collected from the three study areas, returned to the laboratory, and placed in plastic incubation chambers to which water was added. Fruiting bodies of fungi appearing in these chambers over a period of several months were collected and processed in the same manner as specimens associated with decaying wood in the field. The internal transcribed spacer (ITS) ribosomal DNA region was sequenced, and these sequences were blasted against the NCBI database. A total of 320 different fungal taxa were recorded, the majority of which could be identified to species. Two hundred thirteen taxa were recorded as field collections, and 68 taxa were recorded from the incubation chambers. Thirty-nine sequences could be recorded only as unidentified taxa.
    [Show full text]