Supplemental Figure 1
MacA MacB1 MacB2 MacB3 N2wkN N2wk 3wk 2wk 3wk
Supplemental Figure 1. The 89 genes meeting the statistical criteria for upregulation MacA-2wk compared to MacA-N. For the majority of these genes, the absolute expression levels remained significantly lower in MacA-2wk than in MacB populations. Supplemental Figure 2
M1 markers
MacA MacB1 MacB2 MacB3 N2wkN N2wk 3wk 2wk 3wk
M2 markers
MacA MacB1 MacB2 MacB3 N2wkN N2wk 3wk 2wk 3wk
Supplemental Figure 2. Expression of consensus M1/M2 markers in MacA and MacB cells. Top panel – M1 markers; Bottom panel – M2 markers. Genes in gray were not expressed above the threshold (5 FPKM) in any of the populations. Genes differentially expressed in any pairwise comparison Cluster A Cluster B1 Cluster B2 Cluster B2-3wk Cluster B3 0610040J01Rik 1190005I06Rik 1700023F06Rik 5031414D18Rik 1810011O10Rik 1700017B05Rik 1110007C09Rik 2610034B18Rik 9430020K01Rik 8430408G22Rik 2700081O15Rik 2510009E07Rik 1110051M20Rik 4930506M07Rik A530099J19Rik A430078G23Rik A930004D18Rik 5430435G22Rik 1110058L19Rik 4931406C07Rik Abca8a Abca9 Acsbg1 AA467197 1190005I06Rik A230050P20Rik Ablim1 Abi3 Adamts14 Abcc3 1300017J02Rik Abcc5 Ablim3 Acss2 Adamtsl3 Adap2 1500012F01Rik Abcd2 Ace Aox3 Adm Aif1 1600014C10Rik Abcg1 Acer2 Ap1s3 Aebp1 Ang 1700006E09Rik Abhd12 Ackr2 Arhgap15 Ak1 Anpep 1700007K13Rik Abhd17c Adam23 Arhgef10 Amotl1 Aoah 1700017B05Rik Abhd3 Adamts1 Arhgef18 Angptl2 Arg1 1700023F06Rik Abhd5 Adcy4 Arrb1 Ank Arhgap10 1700025G04Rik Acaa1b Adh1 Atp2a3 Ank3 Arhgap19 1700026L06Rik Acot1 Adrbk2 Azin2 Ano1 Asb2 1700029I15Rik Acot2 Afap1l1 BC021614 Apc2 B430306N03Rik 1700056E22Rik Acox1 Aff3 BC035044 Apcdd1 B4galt6 1810011H11Rik Adam22 Ager Bcl11a Arhgap22 Baiap2 1810011O10Rik Adam33 Akap12 Bcl6 Arhgef25 Basp1 2200002D01Rik Adamts2 Aldh1a1 Birc3 Arhgef40 Batf2 2310009B15Rik Adarb1 Aldh1a2 Bmyc Asns Bcl2l1 2510009E07Rik Adcy3 Aplnr Bpifa1 Aspn Blnk 2610034B18Rik Adipor2 Apol7c Bpifb1 B3gnt9 Bnip3 2610524H06Rik Afap1 Aqp1 Btla B9d1 Bst2 2700081O15Rik Agmo Aqp5 Cbr2 Bace1 C1qa 2810417H13Rik Agpat9 Arhgap29 Ccdc88c Bag2 C1qb 2900026A02Rik Aifm2 Arhgef15 Cd300lb Bcar1 C1qc 4930481A15Rik Ak8 Arhgef26 Cd3d Bcat1 C3ar1 4930506M07Rik Alas1 Arl4d Cd55 Bmp1 Ccl12 4931406C07Rik Aldoc Art3 Cdc42ep2 Bnc1 Ccl2 5031414D18Rik Alox5 Astl Cdh23 Btbd11 Ccl24 5330417C22Rik Aloxe3 Axin2 Ceacam1 C1qtnf6 Ccl7 5430435G22Rik Angel1 B4galt4 Chad Cald1 Ccl8 8430408G22Rik Angptl3 Bach2 Cldn3 Cbx6 Ccr1 8430419L09Rik Angptl4 BC049352 Clec2g Ccbe1 Ccr5 9430020K01Rik Anxa4 Bcam Clec2i Ccdc136 Cd38 A230050P20Rik Arl11 Bcl2 Clec3b Ccl11 Cd72 A430078G23Rik Atp10a Bcl6b Csgalnact2 Cd248 Cd81 A530032D15Rik Atp6v0d2 Bgn Csrp2 Cda Cd93 A530064D06Rik Atxn1 Bmp4 Cst3 Cdc42ep5 Cebpzos A530099J19Rik Axl Bmp6 Cyp2ab1 Cdr2l Clec4d A730061H03Rik B3gnt7 C130074G19Rik Cyp2f2 Cep170b Cmklr1 A930004D18Rik BC026585 C1qtnf2 Cytip Chpf Col14a1 AA467197 Bcar3 C7 Ddit4 Clip3 Cpne2 Aatk Bckdhb Cadm3 Dennd3 Clstn3 Cst7 AB124611 Bend6 Calcrl Dusp10 Clu Cstb Abca1 Best1 Camk2n1 Dusp2 Cnn3 Ctla2b Abca6 Blvra Car14 E130208F15Rik Col18a1 Ctsc Abca8a Bmpr1a Casc4 Ebi3 Col1a1 Ctsl Abca9 Bmx Casz1 Fam49a Col3a1 Cxcl14 Abcb1b Bzw2 Cbfa2t3 Fam71a Col5a1 Cxcl16 Abcb6 C2cd2l Cblb Fcho1 Col6a1 Cxcl2 Abcc3 C530008M17Rik Ccdc170 Flt3l Col6a2 Cxcl9 Abcc5 Car4 Ccdc92 Foxp1 Col6a3 Dnase1l3 Abcd2 Car5b Ccl17 Frat1 Col8a1 Dok2 Abcg1 Card11 Ccl22 Frat2 Cpe Dppa3 Abcg3 Ccdc80 Ccm2l Fyb Crtap Ecm1 Abhd1 Ccl6 Ccr7 G0s2 Csgalnact1 Emp1 Abhd12 Ccnd2 Cd163 Gbp9 Ctxn1 Etv5 Abhd14a Ccpg1 Cd209a Gm1966 Cul7 Fabp3 Abhd17c Cd101 Cd209c Gpr18 Cxxc5 Fads1 Abhd3 Cd164 Cd209d Haao Cyr61 Fam20c Abhd5 Cd1d1 Cd226 Hes1 Dbn1 Fam213b Abi3 Cd2 Cd300e Hpgd Dcbld2 Fam46c Ablim1 Cd200r1 Cd300ld Hsd11b1 Dcn Fcgr1 Ablim3 Cd200r4 Cd34 Il1b Ddr2 Fcna Abtb2 Cd22 Cd3e Il27 Dkk2 Fcrlb Acaa1b Cd274 Cd7 Ip6k3 Dlg5 Fcrls Ace Cd300lf Cd79a Itga4 Dlx1 Fgd6 Acer2 Cd302 Cd83 Itgal Dlx2 Fgf13 Acer3 Cd9 Cdc14a Itgb3 Dmwd Fmnl2 Ackr2 Cdc25b Cdh5 Itpr1 Dnm1 Fnip2 Ackr3 Cdc42ep3 Cdkn1c Kctd1 Dpt Folr2 Acot1 Cdca7l Cdo1 Klf2 Dpy19l3 Gabbr2 Acot2 Cdh1 Cecr6 Klf9 Dpysl3 Galnt2 Acox1 Celf4 Cep112 Krt80 Dusp18 Gas6 Acp5 Ces2c Cep85l Krtcap3 Dusp9 Gatm Acrbp Chd5 Ces1d Ldlrad3 Egfr Gdf3 Acsbg1 Chil3 Chil1 Lifr Enah Glrx Acss1 Chp1 Chn2 Limd2 Etv1 Gpr34 Acss2 Cib2 Cldn18 Lipe Etv4 Gpr84 Actn1 Cideb Cldn5 Lmo1 Eya1 Grhpr Acyp1 Cidec Clec10a Lpcat4 F3 Grn Ada Cldn1 Clec14a Lrmp Fam149a Hexb Adam19 Clec1b Clec1a Lrrk2 Fam92a Hist1h1a Adam22 Clec7a Clic3 Lst1 Farp1 Hist1h2ab Adam23 Clmn Clic5 Ly6i Fbn1 Hist1h2ae Adam33 Cmbl Col27a1 Lyz1 Fgfr1 Hist1h2ag Adam8 Colec12 Cox4i2 Map3k12 Fhl2 Hist1h2ah Adamts1 Comt Cpm Map3k6 Figf Hist1h2ak Adamts14 Coro2b Crip2 Map3k8 Fkbp10 Hist1h2bh Adamts2 Coro6 Crispld2 Mbp Fkbp11 Hist1h2bk Adamtsl3 Cox6b2 Cryab Mef2c Fkbp9 Hist1h2bm Adap2 Cped1 Ctgf Megf9 Flnb Hist1h3b Adarb1 Cpne5 Ctla2a Mettl7a1 Flnc Hist1h3c Adck3 Cpne8 Ctnnd2 Mtus1 Flrt2 Hist1h4f Adcy3 Cracr2b Cxcl12 Muc1 Fosl1 Hist2h3b Adcy4 Ctsf Cxcl15 Myo18a Foxg1 Hist3h2ba Add3 Cx3cl1 Cxx1c Nav1 Fscn1 Hmox1 Adh1 Cxcr1 Cyfip2 Nbeal2 Fstl1 Hpgds Adipor2 Cxcr2 Cyp2b10 Nedd4l Fstl3 Htr2b Adm Cyb561 Cyp2s1 Nfkbie Gas1 Htra3 Adora2a Cyb561a3 Cyp4b1 Nhsl2 Gas2 Iigp1 Adora2b D330045A20Rik Cys1 Nr4a1 Gja1 Il21r Adora3 D630039A03Rik Cytl1 Nrarp Gli3 Il7r Adrb1 Dapk1 Cyyr1 Nsmaf Gm773 Insl6 Adrb2 Dgat2 Dapl1 Nsun4 Gnb4 Irg1 Adrbk2 Dhrs3 Dcstamp Ntng2 Gpc1 Itga9 Adssl1 Dhrs7b Dennd4a Pdcd4 Gpr124 Kcnj10 Aebp1 Dip2c Dgkh Pik3ip1 Gpsm2 Kcnk13 Afap1 Dmd Dlc1 Pilrb1 Gpx8 Kcnn4 Afap1l1 Dmxl2 Dll4 Plagl1 Grem1 Kctd7 Aff3 Dnajb13 Dnah12 Plbd1 Gxylt2 Lat2 Afmid Dusp13 Dnaja4 Pmaip1 Hic1 Lgals3bp Ager Dysf Dpep1 Pou2f2 Hmga1 Lgmn Agmo Ear1 Dpp4 Ppp1r15a Hmga2 Lhfpl2 Agpat9 Ear2 Dusp16 Psd Hmgn3 Maf Ahnak2 Ear6 Edn1 Ptprj Hoxa7 Mif Ahr Ech1 Efemp1 Rap1gap2 Hoxd8 Mmp12 Aif1 Echdc1 Efnb1 Rasgrf2 Hoxd9 Mmp13 Aif1l Ehhadh Efnb2 Rasgrp4 Hspb8 Mmp14 Aifm2 Enpp1 Egfl7 Rcsd1 Hspg2 Ms4a14 Ak1 Epcam Egflam Rere Htra1 Ms4a6d Ak4 F7 Egr3 Rgs18 Igf2bp2 Ms4a7 Ak8 Fabp1 Ehf Ripk2 Igf2r Msr1 Akap12 Fabp4 Eltd1 Rnase6 Igfbp4 Ndufaf6 Akap2 Fam115a Emcn S1pr4 Igfbp6 Nme4 Akap5 Fam118b Emp2 Samsn1 Il18rap Npy Akr1b8 Fam122b Emr4 Sap25 Il1r1 Nt5dc2 Akr1e1 Fam189a2 Eno3 Satb1 Il1rl1 Nup43 Akt3 Fam213a Enpep Scgb1a1 Il33 Nxpe5 Alas1 Fam69a Epas1 Scgb3a1 Islr Oit3 Aldh1a1 Fam78b Epha4 Scgb3a2 Itpr3 Olfml3 Aldh1a2 Fam89a Ephb4 Sept6 Kcnq5 Ophn1 Aldh1b1 Fcgrt Ephx1 Siglecg Kdelr3 Orc1 Aldoc Fcor Erg Sik1 Kera Paox Alox15 Ffar2 Esam Skint3 Kirrel Pdgfa Alox5 Ffar4 Esrp2 Slc2a6 Klf5 Pdlim4 Aloxe3 Flt1 Etl4 Slc44a2 Krt18 Pdpn Amica1 Fmn1 Ets1 Slc46a3 Krt8 Pf4 Amot Fpr1 Etv3 Slc6a12 Lama5 Pgam1 Amotl1 Fpr2 F2rl2 Sntb1 Lamb1 Plau Ang Fut7 Faim3 Spic Lamc1 Pmepa1 Angel1 Fzd8 Fam174b Sstr4 Leprel2 Ppbp Angptl2 Gal Fas St8sia4 Lgi2 Prkar1b Angptl3 Galm Fcrl1 Stk10 Lpar1 Procr Angptl4 Galnt3 Fcrla Susd3 Lrig1 Rab11fip5 Ank Gca Fermt2 Tbc1d8 Lrrc15 Rab3il1 Ank3 Gdf15 Fgd5 Tex22 Lrrc17 Rai14 Ankrd13b Gm4980 Fhl1 Tmc8 Ltbp1 Rapsn Ankrd33b Gmds Flt3 Tmem88 Ltbp3 Rbpj Ankrd37 Gmpr Fmo1 Traf3ip3 Lum Rgs1 Anln Gna15 Fmo2 Trem3 Maged1 Rgs10 Ano1 Golm1 Fndc1 Upb1 Magi1 Sash1 Anpep Gpd1 Foxf1 Utrn Map1b Scamp5 Anxa4 Gpr137b Fxyd1 Vav3 Mapk8ip1 Sdc4 Aoah Gpr155 Fyn Vps37b Mast4 Serf1 Aox3 Gpr160 Galnt18 Wfdc2 Medag Slc13a3 Ap1s3 Gpr55 Gata2 Wnt11 Mfsd2a Slc29a3 Ap5s1 Grap2 Gata3 Xdh Micall2 Slc2a1 Apbb2 Grb7 Gem Zcchc11 Mmp3 Slc37a2 Apc2 Gstt3 Gfra2 Zfp296 Mpzl1 Slc46a1 Apcdd1 Gyg Gimap1 Zfyve9 Mxra8 Slc6a8 Apitd1 Hadhb Gimap4 Myc Slc7a8 Apln Hcar2 Gimap6 Nav3 Spdl1 Aplnr Hebp1 Gja4 Nckap1 Src Apobec1 Hook1 Gja5 Nedd4 Stab1 Apoc1 Hr Gjb2 Ngf Steap3 Apoc2 Hsd17b7 Glp1r Nhsl1 Syngr1 Apoe Hsd3b7 Gm10277 Nid1 Syt11 Apol7c Hspa12a Gpc3 Nkain1 Tgfbi Aprt Htr2c Gpihbp1 Nkx2-2 Tlr1 Aqp1 Hvcn1 Gpr116 Nphp1 Tlr12 Aqp5 Ifitm10 Gpr182 Nptx1 Tm4sf19 Arap1 Il12rb2 Gprc5a Nptxr Tmem119 Arap2 Il18 Gpx3 Nr2f1 Tmem171 Areg Il1rl2 Grap Nrn1 Tmem37 Arg1 Inadl Grasp Ntn1 Tnfrsf14 Arg2 Iqsec1 Grrp1 Nxn Tnfrsf9 Arhgap10 Itgax Gsta3 Oaf Tpi1 Arhgap15 Kazald1 Gucy1a3 Obsl1 Trem2 Arhgap19 Kazn Gzma Osr1 Treml2 Arhgap22 Kcne3 H2-DMb2 Osr2 Tsen15 Arhgap24 Kcnh4 H2-Oa Pard3 Tubb2a Arhgap26 Kcnip4 H2-Ob Parva Xylt2 Arhgap29 Kcnk5 H2-Q5 Pcbp4 Zdhhc14 Arhgef10 Kcnn3 H2-Q6 Pcdh7 Zmynd15 Arhgef10l Kctd12b Hc Pcgf2 Arhgef15 Klhdc4 Hecw2 Pcolce Arhgef18 Krt19 Heg1 Pear1 Arhgef25 Krt79 Hepacam2 Peg10 Arhgef26 Kynu Hey1 Plac1 Arhgef3 Laptm4b Hfe Plod2 Arhgef37 Large Hmcn1 Ppic Arhgef40 Lepr Hs3st1 Prkcdbp Arid5a Lilra5 Icam2 Prkg2 Arl11 Lima1 Igfbp2 Prl2c2 Arl4d Lipa Igfbp5 Prl2c3 Arl5c Lipf Igfbp7 Prrg4 Arntl2 Lmo4 Ikzf3 Prrx1 Arrb1 Lphn2 Il4i1 Ptges Arsg Lphn3 Ildr1 Pthlh Art3 Lpin1 Inmt Ptn Asap2 Lpl Irf4 Ptpla Asb2 Lrp4 Itga8 Ptpn14 Asf1b Lsr Jam2 Ptprn Asns Ltc4s Kdr Ptprs Aspn Ly75 Kif21b Pxdn Ass1 Lyplal1 Kit Rab4a Astl Lyrm4 Klrd1 Rbfox2 Atg9b Magee1 Klri1 Rbp4 Atp10a Mak Lamp3 Rbpms2 Atp1a3 Mamdc2 Ldb2 Rcn1 Atp2a3 Mamld1 Limch1 Rcor2 Atp2b4 Mapre3 Lims2 Rdh10 Atp6v0d2 Marco Loxl1 Rgma Atp8b2 Marveld2 Lphn1 Rgs16 Atxn1 Matn2 Lrrc32 Rgs17 Auts2 Mavs Lsmem1 Rhbdf1 AW112010 Mcam Ltb Rhox2d Axin2 Mccc2 Ltbp4 Rhox2g Axl Mcemp1 Ly6c1 Rhox2h Azin2 Mcoln3 Lysmd2 Rpl13 B3gnt3 Mertk Lyve1 Rtkn B3gnt5 Mfap3l Mal2 Rundc3a B3gnt7 Mfsd7c Map3k14 S100a8 B3gnt8 Mgat4b Mapt S100a9 B3gnt9 Mgll Mcc Samd4 B430306N03Rik Mgst2 Mdm1 Satb2 B4galt2 Mgst3 Meis2 Scara3 B4galt4 Mical3 Mfap4 Sccpdh B4galt6 Mkx Mgl2 Sdc2 B9d1 Mr1 Mgp Sema3a Bace1 Mrc1 Mid2 Sema4c Bach2 Mreg Mmp15 Sema5a Bag2 Mrps33 Mmp23 Sept5 Bahcc1 Ms4a8a Mmp25 Serpinf1 Baiap2 Mtap7d3 Mmrn2 Serpinh1 Bambi Mtfp1 Msrb3 Sertad4 Basp1 Mtmr7 Myct1 Sh3d19 Batf2 Mum1 Myh14 Shisa4 BC021614 Myo6 Mylk Six4 BC026585 Myo7a Myo1b Slc14a1 BC028528 Nabp1 Myo1d Slc16a1 BC035044 Napepld Myo1g Slc20a2 BC049352 Nceh1 Myzap Slc30a4 BC055324 Ncoa4 Nbl1 Slc38a4 Bcam Nedd9 Ncald Slc9b1 Bcar1 Net1 Nccrp1 Smo Bcar3 Neurl1b Nckap5 Smtn Bcas1 Nol4l Ndnf Smyd2 Bcat1 Nr3c2 Ndufa4l2 Snai1 Bckdhb Nrg4 Nebl Snai2 Bcl11a Nucb2 Negr1 Sox4 Bcl2 Nudt12 Nfib Sox9 Bcl2a1a Nxt2 Nfkbiz Spred3 Bcl2a1b Ocln Ngfr Spry2 Bcl2a1d Olr1 Nkd1 Spry4 Bcl2l1 Ovol2 Nkg7 Ssc5d Bcl3 P2ry13 Notch3 Stc1 Bcl6 P2ry14 Npnt Steap2 Bcl6b P2ry2 Npr1 Synpo Bcr Pald1 Nrgn Tcf7l1 Bdh1 Parp16 Ntn4 Tead1 Bend6 Pbx1 Ntrk2 Tead2 Best1 Pced1b Ogn Tenm4 Bgn Pcyox1 Osgin2 Tfap2a Bhlhe41 Pdk4 P2ry10 Thbs2 Bin1 Pecr Palmd Tnc Birc3 Penk Pcdh1 Tnfrsf10b Birc5 Per2 Pcolce2 Tnk2 Blnk Perp Pcp4l1 Tpm1 Blvra Pex11a Pde3a Tpm2 Bmp1 Pgap1 Pde5a Traf4 Bmp4 Pgpep1 Pdgfrb Trip6 Bmp5 Phgdh Pdzd2 Tubb3 Bmp6 Phospho1 Pecam1 Twist1 Bmpr1a Pik3ap1 Pglyrp1 Twist2 Bmx Pla2g15 Phlpp1 Uaca Bmyc Plcb2 Pitpnm2 Unc5b Bnc1 Pld3 Pkp3 Usp43 Bnc2 Plekhg1 Plcb4 Vasn Bnip3 Plet1 Pllp Wisp1 Bpifa1 Plscr1 Plvap Wnt7b Bpifb1 Plscr4 Podxl Zfp462 Bst1 Pnpla7 Podxl2 Zfp580 Bst2 Pnpla8 Postn Zfp827 Btbd11 Poli Pot1b Zic2 Btla Pon3 Ppap2a Bub1 Pparg Ppp1r14a Bub1b Ppm1j Ppp1r16b Bzrap1 Ppp1r12b Prelp Bzw2 Ppp1r9a Prex2 C130074G19Rik Prkar2b Prickle1 C1qa Pros1 Prrg1 C1qb Prrt1 Prx C1qc Ptger2 Ptp4a3 C1qtnf1 Ptgfrn Ptprb C1qtnf2 Ptpn3 Ptprcap C1qtnf6 Pxmp4 Ptprg C1rl Qdpr Ptprm C1s1 Qprt Pvrl1 C2cd2l Rab19 Ramp2 C330027C09Rik Rab44 Rapgef3 C3ar1 Ralgds Rasgrp3 C4b Rem1 Rasip1 C530008M17Rik Renbp Rbms3 C5ar1 Reps2 Rbpms C5ar2 Rhof Rel C7 Rims3 Retnla C77080 Rnase2b Rgag4 Cacna1d Rnf144b Rhoj Cacnb3 Rnf180 Ripply3 Cad Rora Rnf144a Cadm1 Rps4l Robo2 Cadm3 Rpusd3 Robo4 Calcrl Rras2 Rtn1 Cald1 Rufy4 Rtp3 Calhm2 Rxra S100a16 Camk1 S100a1 S1pr1 Camk2n1 Sardh S1pr5 Camk2n2 Sec14l2 Scn3b Capg Sema3e Scn7a Car13 Sema6d Scnn1a Car14 Serpinb1a Scube2 Car4 Serpinb6a Sdpr Car5b Serpine1 Sec14l3 Car6 Sgk1 Sema3c Card11 Sh2d1b1 Sema3f Card6 Sh2d4b Sema3g Casc4 Sh3bgrl2 Sema6a Casc5 Siglecf Sema7a Cass4 Slc17a9 Sept1 Casz1 Slc18a1 Sept4 Cbfa2t3 Slc1a3 Serping1 Cblb Slc22a17 Sesn3 Cbr2 Slc22a18 Setbp1 Cbx5 Slc29a1 Sftpa1 Cbx6 Slc39a12 Sftpb Ccbe1 Slc39a2 Sftpc Ccdc102a Slc52a3 Sftpd Ccdc136 Slc5a6 Sgip1 Ccdc170 Slc6a4 Sh2d3c Ccdc80 Slc7a2 Shroom3 Ccdc88c Slc9a2 Slc12a2 Ccdc92 Slc9a4 Slc15a2 Ccl11 Slc9a7 Slc16a9 Ccl12 Slco2b1 Slc24a1 Ccl17 Slpi Slc25a23 Ccl2 Snn Slc27a3 Ccl22 Snrpg Slc2a3 Ccl24 Snx7 Slc34a2 Ccl27a Socs2 Slc43a3 Ccl4 Sort1 Slc9a3r2 Ccl5 Spag11b Slco2a1 Ccl6 Spire1 Smad6 Ccl7 Spns1 Smagp Ccl8 St7 Sod3 Ccl9 Sulf2 Sox13 Ccm2l Sult2b1 Sox17 Ccna2 Syn1 Sox18 Ccnb2 Syne2 Sox7 Ccnd1 Synj2 Spata13 Ccnd2 Syp Spn Ccne1 Tbc1d2 Spns2 Ccne2 Tc2n Spock2 Ccnf Tcf7l2 St3gal5 Ccpg1 Tfec St5 Ccr1 Tle6 St6galnac2 Ccr2 Tlr5 St8sia6 Ccr5 Tma7 Stap1 Ccr7 Tmem138 Stmn2 Cd101 Tmem150a Strip2 Cd109 Tmem151a Sult1a1 Cd163 Tmem154 Tagln Cd164 Tmem216 Tbx2 Cd177 Tmem238 Tbx3 Cd1d1 Tmem41a Tcea3 Cd2 Tmem64 Tcf21 Cd200 Tnfaip2 Tcf7 Cd200r1 Tnfrsf26 Tek Cd200r4 Tnfsf13 Tgfb1i1 Cd209a Tob1 Tgm3 Cd209c Trf Thbd Cd209d Trim13 Thsd1 Cd22 Trim29 Tiam2 Cd226 Trim46 Tie1 Cd244 Tspan32 Timd4 Cd248 Ttyh2 Timp3 Cd27 Tuba1b Tinagl1 Cd274 Ucp3 Tk1 Cd276 Unc119 Tmem100 Cd300a Ung Tmem204 Cd300e Usp49 Tmem26 Cd300lb Vav2 Tmem47 Cd300ld Vkorc1l1 Tmem98 Cd300lf Vstm2a Tmtc2 Cd300lg Wfdc10 Tnfsf9 Cd300lh Wfdc21 Tnip3 Cd302 Wwtr1 Tox2 Cd320 Xlr Traf1 Cd34 Xrcc5 Treml4 Cd36 Xylb Trib2 Cd38 Zfand2a Tspan12 Cd3d Zfp125 Tspan18 Cd3e Zfp770 Tspan2 Cd3g Zfp935 Tspan33 Cd4 Zfp948 Tspan7 Cd40 Vipr2 Cd52 Vldlr Cd55 Vtn Cd63 Zbtb16 Cd7 Zbtb46 Cd72 Zc3h12c Cd74 Zeb1 Cd79a Zfp366 Cd79b Cd81 Cd82 Cd83 Cd86 Cd9 Cd93 Cd97 Cda Cdc14a Cdc20 Cdc25b Cdc42ep2 Cdc42ep3 Cdc42ep5 Cdc7 Cdca3 Cdca7 Cdca7l Cdca8 Cdh1 Cdh23 Cdh5 Cdhr4 Cdk1 Cdk18 Cdkn1c Cdkn2b Cdo1 Cdr2l Cds1 Ceacam1 Cebpzos Cecr6 Celf4 Cenpf Cenpv Cep112 Cep170b Cep55 Cep85l Cers4 Ces1d Ces2c Cfap61 Cfb Cfh Ch25h Chad Chaf1a Chd5 Chek1 Chil1 Chil3 Chn2 Chp1 Chpf Chrne Chst11 Chst15 Ciart Cib2 Cideb Cidec Ciita Cit Cited4 Ckap2 Ckap4 Ckb Cks1b Cldn1 Cldn18 Cldn3 Cldn5 Clec10a Clec12a Clec14a Clec1a Clec1b Clec2g Clec2i Clec3b Clec4a1 Clec4b1 Clec4d Clec4n Clec5a Clec7a Clec9a Clic3 Clic5 Clip3 Clmn Clmp Clspn Clstn3 Clu Cmbl Cmc1 Cmc2 Cmklr1 Cmpk2 Cmtm7 Cndp2 Cnn2 Cnn3 Cobll1 Col14a1 Col15a1 Col16a1 Col18a1 Col1a1 Col27a1 Col3a1 Col5a1 Col6a1 Col6a2 Col6a3 Col8a1 Colec12 Comt Coq7 Coro2b Coro6 Cox4i2 Cox6b2 Cpe Cped1 Cpm Cpne2 Cpne5 Cpne8 Cpq Cracr2b Creb5 Crip1 Crip2 Crispld2 Crtap Cryab Csf1 Csf1r Csf3r Csgalnact1 Csgalnact2 Csrp2 Cst3 Cst7 Cstb Ctgf Ctla2a Ctla2b Ctnnd2 Ctsc Ctsd Ctse Ctsf Ctsk Ctsl Cttnbp2nl Ctxn1 Cul7 Cx3cl1 Cx3cr1 Cxcl1 Cxcl10 Cxcl12 Cxcl13 Cxcl14 Cxcl15 Cxcl16 Cxcl17 Cxcl2 Cxcl3 Cxcl9 Cxcr1 Cxcr2 Cxx1a Cxx1c Cxxc5 Cyb561 Cyb561a3 Cyfip2 Cyp27a1 Cyp2a5 Cyp2ab1 Cyp2b10 Cyp2f2 Cyp2s1 Cyp39a1 Cyp4b1 Cyr61 Cys1 Cysltr1 Cytip Cytl1 Cyyr1 D330045A20Rik D3Ertd751e D630039A03Rik D830025C05Rik D8Ertd82e Dab2 Dagla Dapk1 Dapl1 Dbn1 Dbp Dcbld2 Dcn Dcstamp Dctd Ddit4 Ddr1 Ddr2 Dennd2a Dennd3 Dennd4a Dgat2 Dgcr6 Dgkg Dgkh Dhdh Dhrs3 Dhrs7b Diap3 Dip2c Dkk2 Dlc1 Dlg4 Dlg5 Dlgap5 Dll4 Dlx1 Dlx2 Dmd Dmkn Dmpk Dmwd Dmxl2 Dnah12 Dnah2 Dnaja4 Dnajb13 Dnase1l3 Dnm1 Dnmt3l Dnph1 Dok2 Dpep1 Dpp4 Dpp7 Dppa3 Dpt Dpy19l3 Dpysl3 Dst Dtx4 Dusp10 Dusp13 Dusp14 Dusp16 Dusp18 Dusp2 Dusp4 Dusp8 Dusp9 Dut Dyrk3 Dysf E030030I06Rik E130208F15Rik E2f7 Ear1 Ear2 Ear6 Ebi3 Ece1 Ech1 Echdc1 Ecm1 Ect2 Edn1 Efemp1 Efemp2 Efnb1 Efnb2 Egfl7 Egflam Egfr Egln3 Egr2 Egr3 Ehbp1 Ehf Ehhadh Eif4e3 Eltd1 Emb Emcn Emilin2 Eml6 Emp1 Emp2 Emr4 Enah Eno3 Enpep Enpp1 Epas1 Epb4.1l1 Epb4.1l3 Epcam Epha2 Epha4 Ephb4 Ephx1 Epm2a Epn2 Epsti1 Ereg Erg Ero1l Errfi1 Esam Esr1 Esrp2 Ethe1 Etl4 Ets1 Etv1 Etv3 Etv4 Etv5 Eya1 F11r F13a1 F2r F2rl2 F3 F5 F7 Fabp1 Fabp3 Fabp4 Fabp5 Fads1 Fah Faim3 Fam109b Fam115a Fam117a Fam118b Fam122b Fam124a Fam149a Fam174b Fam189a2 Fam189b Fam20a Fam20c Fam213a Fam213b Fam26f Fam43a Fam46c Fam49a Fam64a Fam65b Fam69a Fam71a Fam78b Fam83a Fam89a Fam92a Farp1 Fas Fastkd2 Fat1 Fau Fblim1 Fbln1 Fbn1 Fbxo5 Fcgr1 Fcgr4 Fcgrt Fcho1 Fcna Fcnb Fcor Fcrl1 Fcrla Fcrlb Fcrls Fermt2 Ffar2 Ffar4 Fgd2 Fgd3 Fgd5 Fgd6 Fgf1 Fgf13 Fgf7 Fgfr1 Fgfr4 Fgl2 Fhad1 Fhdc1 Fhl1 Fhl2 Fhl3 Fibin Figf Fignl1 Fkbp10 Fkbp11 Fkbp9 Flnb Flnc Flrt2 Flt1 Flt3 Flt3l Fmn1 Fmnl2 Fmo1 Fmo2 Fn1 Fnbp1l Fndc1 Fnip2 Folr2 Fosl1 Foxf1 Foxf2 Foxg1 Foxm1 Foxp1 Fpr1 Fpr2 Frat1 Frat2 Fscn1 Fstl1 Fstl3 Fth1 Fut7 Fxyd1 Fxyd2 Fyb Fyn Fzd4 Fzd8 G0s2 Gabbr1 Gabbr2 Gadd45a Gal Galk1 Galm Galnt18 Galnt2 Galnt3 Galnt6 Galnt9 Gapt Gas1 Gas2 Gas6 Gas7 Gata2 Gata3 Gatm Gatsl2 Gbgt1 Gbp2 Gbp3 Gbp5 Gbp8 Gbp9 Gca Gcdh Gchfr Gclm Gdf15 Gdf3 Gem Gemin4 Gfi1b Gfra2 Ggn Ghr Gimap1 Gimap4 Gimap6 Gins2 Gja1 Gja4 Gja5 Gjb2 Gjc1 Gli2 Gli3 Glis2 Glis3 Glmn Glp1r Glrp1 Glrx Gm10134 Gm10244 Gm10277 Gm10300 Gm10517 Gm10621 Gm10655 Gm10801 Gm12185 Gm14221 Gm14446 Gm1673 Gm1966 Gm20498 Gm4955 Gm4980 Gm5431 Gm7008 Gm7694 Gm773 Gm9733 Gmds Gmfg Gmpr Gna15 Gnao1 Gnb4 Gng10 Golm1 Got1 Gpc1 Gpc3 Gpcpd1 Gpd1 Gpihbp1 Gpnmb Gpr116 Gpr124 Gpr132 Gpr137b Gpr141 Gpr153 Gpr155 Gpr157 Gpr160 Gpr171 Gpr18 Gpr182 Gpr183 Gpr34 Gpr35 Gpr55 Gpr56 Gpr65 Gpr68 Gpr84 Gprc5a Gprc5c Gpsm2 Gpt2 Gpx3 Gpx8 Grap Grap2 Grasp Grb7 Grem1 Grhpr Grn Grrp1 Grwd1 Gsg1 Gsr Gsta3 Gstk1 Gstm5 Gstt3 Gucy1a3 Gxylt2 Gyg Gypc Gys1 Gzma H1fx H2-Aa H2-Ab1 H2-DMb2 H2-Eb1 H2-Ke6 H2-M2 H2-Oa H2-Ob H2-Q5 H2-Q6 H2-Q7 H2-T24 H60b Haao Hadhb Hba-a1 Hba-a2 Hbb-b1 Hbb-b2 Hbegf Hc Hcar2 Hdac7 Hdc Hebp1 Hecw2 Heg1 Hells Helz2 Hepacam2 Hes1 Hexb Hey1 Hfe Hic1 Hip1r Hist1h1a Hist1h2ab Hist1h2ae Hist1h2af Hist1h2ag Hist1h2ah Hist1h2ak Hist1h2bh Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h3b Hist1h3c Hist1h3g Hist1h4f Hist1h4n Hist2h2bb Hist2h3b Hist3h2ba Hivep2 Hivep3 Hk1 Hk3 Hlf Hmcn1 Hmga1 Hmga1-rs1 Hmga2 Hmgn1 Hmgn3 Hmox1 Hn1l Hook1 Hopx Hoxa3 Hoxa7 Hoxb4 Hoxd8 Hoxd9 Hp Hpgd Hpgds Hpse Hr Hs3st1 Hsd11b1 Hsd17b7 Hsd3b7 Hspa12a Hspa1a Hspa1b Hspb11 Hspb8 Hspg2 Htr2b Htr2c Htr7 Htra1 Htra3 Hvcn1 Hyal1 Ica1 Icam2 Ier3 Ier5l Ifi203 Ifi204 Ifi205 Ifi27l2a Ifi47 Ifit1 Ifit2 Ifit3 Ifitm1 Ifitm10 Ifitm2 Ifitm3 Ifitm5 Ifitm6 Ift122 Ift81 Igf1 Igf1r Igf2bp2 Igf2r Igfbp2 Igfbp3 Igfbp4 Igfbp5 Igfbp6 Igfbp7 Igsf9 Igtp Iigp1 Ikbke Ikzf3 Il10 Il10ra Il11ra1 Il12rb2 Il15 Il18 Il18bp Il18rap Il1a Il1b Il1r1 Il1r2 Il1rl1 Il1rl2 Il1rn Il21r Il27 Il33 Il4i1 Il6 Il7r Ildr1 Inadl Inca1 Inhba Inmt Inpp4b Insl6 Ip6k3 Ipo4 Iqgap3 Iqsec1 Irf1 Irf4 Irf5 Irf7 Irg1 Irgm1 Isg15 Isg20 Islr Itga3 Itga4 Itga6 Itga8 Itga9 Itgal Itgam Itgax Itgb3 Itgb6 Itgb7 Itpr1 Itpr3 Jade2 Jam2 Jarid2 Jup Kank2 Kazald1 Kazn Kbtbd11 Kcne3 Kcnh4 Kcnip4 Kcnj10 Kcnk13 Kcnk5 Kcnn3 Kcnn4 Kcnq5 Kctd1 Kctd12b Kctd14 Kctd7 Kdelr3 Kdm6b Kdr Kera Kif18b Kif20a Kif21b Kif2c Kifc1 Kirrel Kit Klf2 Klf5 Klf9 Klhdc4 Klra17 Klrb1b Klrb1f Klrd1 Klri1 Klrk1 Kmo Knstrn Krt18 Krt19 Krt79 Krt8 Krt80 Krtcap3 Kynu L1cam Lacc1 Lama5 Lamb1 Lamc1 Lamp3 Laptm4b Large Lat2 Layn Lbh Lbp Lbr Lcn2 Ldb2 Ldhb Ldlrad3 Lepr Leprel2 Lgals1 Lgals3bp Lgi2 Lgmn Lhfp Lhfpl2 Lifr Lig1 Lilra5 Lilra6 Lima1 Limch1 Limd2 Lims2 Lipa Lipe Lipf Lmna Lmnb2 Lmo1 Lmo4 Lonrf3 Loxl1 Loxl3 Lpar1 Lpar6 Lpcat1 Lpcat2 Lpcat4 Lphn1 Lphn2 Lphn3 Lpin1 Lpl Lppr3 Lrg1 Lrig1 Lrmp Lrp12 Lrp4 Lrp8 Lrr1 Lrrc15 Lrrc16a Lrrc17 Lrrc25 Lrrc32 Lrrk2 Lsmem1 Lsr Lst1 Ltb Ltb4r1 Ltbp1 Ltbp3 Ltbp4 Ltc4s Lum Ly6a Ly6c1 Ly6c2 Ly6i Ly75 Ly86 Lyl1 Lyplal1 Lyrm4 Lysmd2 Lyve1 Lyz1 Mad2l1 Maf Mafb Mag Maged1 Magee1 Magi1 Mak Mal2 Mamdc2 Mamld1 Man1a Manea Map1b Map2k6 Map3k12 Map3k14 Map3k6 Map3k8 Mapk8ip1 Mapre3 Mapt Marcks Marcksl1 Marco Marveld2 Mast4 Matk Matn2 Mavs Mboat1 Mbp Mcam Mcc Mccc2 Mcemp1 Mcm10 Mcm2 Mcm3 Mcm5 Mcm6 Mcm7 Mcoln2 Mcoln3 Mcts2 Mcu Mdm1 Medag Mef2c Mefv Megf9 Meig1 Meis2 Meis3 Mertk Met Mettl10 Mettl7a1 Mfap3l Mfap4 Mfsd12 Mfsd2a Mfsd6 Mfsd7c Mgat4a Mgat4b Mgl2 Mgll Mgmt Mgp Mgst1 Mgst2 Mgst3 Mical3 Micall2 Mid2 Mif Mis18bp1 Mitf Mki67 Mkx Mlkl Mmp11 Mmp12 Mmp13 Mmp14 Mmp15 Mmp19 Mmp23 Mmp25 Mmp3 Mmp8 Mmp9 Mmrn2 Mnda Mndal Mob3b Mov10 Mpzl1 Mpzl3 Mr1 Mras Mrc1 Mrc2 Mreg Mrps22 Mrps33 Mrps6 Ms4a14 Ms4a4b Ms4a4c Ms4a6b Ms4a6c Ms4a6d Ms4a7 Ms4a8a Msantd3 Msi2 Msr1 Msrb2 Msrb3 Mt1 Mt2 Mt3 Mtap7d3 Mtcl1 Mtfp1 Mthfd1l Mtmr7 Mtus1 Muc1 Mum1 Mvb12b Mx1 Mx2 Mxra7 Mxra8 Mybl2 Myc Myct1 Myh14 Myl9 Mylk Myo18a Myo1b Myo1d Myo1e Myo1g Myo5b Myo6 Myo7a Myzap Nabp1 Nagk Naglu Napepld Napsa Nat8l Nav1 Nav2 Nav3 Nbeal2 Nbl1 Ncald Ncam1 Ncapd2 Ncaph Nccrp1 Nceh1 Nckap1 Nckap5 Ncoa4 Ndc1 Ndnf Ndrg1 Ndufa4l2 Ndufaf6 Nebl Nedd4 Nedd4l Nedd9 Negr1 Nek2 Nek6 Nes Net1 Neurl1b Neurl3 Nfatc2 Nfe2 Nfib Nfkbie Nfkbiz Ngf Ngfr Ngfrap1 Nhsl1 Nhsl2 Nid1 Ninj1 Nkain1 Nkd1 Nkg7 Nkx2-2 Nlgn2 Nlrc5 Nme4 Nod2 Nol4l Nos1ap Nos2 Nostrin Notch3 Npdc1 Nphp1 Npl Npnt Npr1 Nptx1 Nptxr Npy Nr2f1 Nr3c2 Nr4a1 Nr4a3 Nrarp Nrg1 Nrg4 Nrgn Nrn1 Nrp2 Nsmaf Nsun4 Nt5dc2 Nt5e Ntn1 Ntn4 Ntng2 Ntpcr Ntrk2 Nucb2 Nudt12 Nuf2 Nup210 Nup43 Nusap1 Nxn Nxpe4 Nxpe5 Nxt2 Oaf Oas1a Oas1g Oas2 Oas3 Oasl1 Oasl2 Oaz2 Obsl1 Ocln Ocstamp Ogn Oit3 Olfml3 Olr1 Ophn1 Oplah Orc1 Oscar Oscp1 Osgin1 Osgin2 Osmr Osr1 Osr2 Ovol2 P2ry10 P2ry12 P2ry13 P2ry14 P2ry2 P4ha2 Pabpc1l Pacsin3 Padi2 Padi4 Pag1 Pald1 Palld Palm Palmd Paox Papss2 Paqr3 Pard3 Parp16 Parva Parvg Pbk Pbx1 Pcbp4 Pcdh1 Pcdh7 Pced1b Pcgf2 Pcolce Pcolce2 Pcp4l1 Pcyox1 Pdcd1lg2 Pdcd4 Pde3a Pde5a Pde7b Pdgfa Pdgfb Pdgfc Pdgfra Pdgfrb Pdk4 Pdlim1 Pdlim4 Pdpn Pdzd2 Peak1 Pear1 Pecam1 Pecr Peg10 Penk Per2 Perp Pex11a Pf4 Pgam1 Pgap1 Pgk1 Pglyrp1 Pgpep1 Phactr1 Phf11a Phf11b Phf11d Phgdh Phlda3 Phlpp1 Phospho1 Pi16 Pianp Pif1 Pigz Pik3ap1 Pik3ip1 Pilrb1 Pitpnm2 Pkdcc Pkmyt1 Pkp3 Pla2g15 Pla2g7 Plac1 Plac8 Plagl1 Plau Plbd1 Plcb1 Plcb2 Plcb4 Pld2 Pld3 Plekhb1 Plekhg1 Plekhg2 Plekhn1 Plekho1 Plet1 Plk1 Plk4 Pllp Plod1 Plod2 Plscr1 Plscr4 Plvap Plxdc2 Plxna1 Pmaip1 Pmepa1 Pnpla7 Pnpla8 Podxl Podxl2 Pole Poli Pon3 Postn Pot1b Pou2f2 Ppa1 Ppap2a Pparg Ppargc1b Ppbp Ppfia4 Ppfibp1 Ppic Ppm1j Ppp1r12b Ppp1r13l Ppp1r14a Ppp1r15a Ppp1r16b Ppp1r3b Ppp1r9a Pram1 Prc1 Prdx1 Prelid2 Prelp Prex2 Prg4 Prickle1 Prickle2 Prim1 Prim2 Prkar1b Prkar2b Prkcb Prkcdbp Prkce Prkg2 Prl2c2 Prl2c3 Prnp Procr Pros1 Prr7 Prrg1 Prrg4 Prrt1 Prrx1 Prtn3 Prune2 Prx Psat1 Psd Psd3 Psen2 Psrc1 Pstpip1 Ptafr Pter Ptger2 Ptges Ptgfrn Ptgr1 Ptgs1 Ptgs2 Pthlh Ptk7 Ptms Ptn Ptp4a3 Ptpla Ptpn14 Ptpn18 Ptpn22 Ptpn3 Ptprb Ptprcap Ptprg Ptprj Ptprm Ptprn Ptpro Ptprs Ptpru Ptrf Ptrh1 Pvr Pvrl1 Pvrl3 Pxdc1 Pxdn Pxmp4 Pydc3 Pydc4 Pyhin1 Qdpr Qpct Qprt Rab11fip5 Rab19 Rab34 Rab36 Rab3il1 Rab44 Rab4a Rac3 Rad51 Raet1d Rai14 Ralgds Ramp1 Ramp2 Ramp3 Rap1gap2 Rapgef3 Rapgef4 Rapsn Rarres2 Rasa3 Rasa4 Rasgrf2 Rasgrp1 Rasgrp2 Rasgrp3 Rasgrp4 Rasip1 Rassf2 Rassf8 Rbfox2 Rbks Rbm38 Rbms3 Rbp4 Rbpj Rbpms Rbpms2 Rcn1 Rcor2 Rcsd1 Rdh10 Rdm1 Rel Rem1 Renbp Reps2 Rere Retnla Rfc3 Rfx2 Rgag4 Rgl1 Rgma Rgs1 Rgs10 Rgs16 Rgs17 Rgs18 Rhbdf1 Rhobtb1 Rhoc Rhof Rhoj Rhou Rhov Rhox2d Rhox2g Rhox2h Rilpl1 Rims3 Ripk2 Ripply3 Rmi2 Rnase2b Rnase6 Rnd1 Rnf128 Rnf144a Rnf144b Rnf150 Rnf180 Rnf213 Robo2 Robo4 Rogdi Ropn1l Rora Rpl13 Rpl36 Rpp40 Rps12l1 Rps4l Rps6ka2 Rpusd3 Rrad Rras2 Rrm1 Rrm2 Rsad2 Rspo1 Rtkn Rtn1 Rtp3 Rtp4 Rufy4 Rundc3a Runx3 Rxra Ryk S100a1 S100a16 S100a4 S100a6 S100a8 S100a9 S1pr1 S1pr4 S1pr5 Saa3 Sac3d1 Samd4 Samsn1 Sap25 Sardh Sash1 Satb1 Satb2 Scamp5 Scara3 Sccpdh Scgb1a1 Scgb3a1 Scgb3a2 Scimp Scn3b Scn7a Scnn1a Scube2 Sdc1 Sdc2 Sdc4 Sdpr Sdr39u1 Sec14l2 Sec14l3 Sec61g Sell Selm Selp Sema3a Sema3c Sema3e Sema3f Sema3g Sema4b Sema4c Sema4d Sema5a Sema6a Sema6d Sema7a Sept1 Sept4 Sept5 Sept6 Serf1 Serpina3g Serpinb1a Serpinb2 Serpinb6a Serpinb8 Serpine1 Serpinf1 Serping1 Serpinh1 Sertad4 Sesn1 Sesn3 Sestd1 Setbp1 Sfmbt2 Sftpa1 Sftpb Sftpc Sftpd Sgip1 Sgk1 Sgms2 Sgol1 Sgsh Sgsm3 Sh2d1b1 Sh2d3c Sh2d4b Sh3bgrl2 Sh3bp4 Sh3d19 Sh3pxd2b Shisa4 Shmt1 Shmt2 Shroom3 Siglec1 Siglecf Siglecg Sik1 Six1 Six4 Skint3 Slamf6 Slamf7 Slamf8 Slamf9 Slc11a1 Slc12a2 Slc12a7 Slc13a3 Slc14a1 Slc15a2 Slc16a1 Slc16a13 Slc16a3 Slc16a6 Slc16a9 Slc17a9 Slc18a1 Slc1a3 Slc20a2 Slc22a17 Slc22a18 Slc22a23 Slc23a2 Slc24a1 Slc25a23 Slc27a1 Slc27a3 Slc29a1 Slc29a3 Slc2a1 Slc2a3 Slc2a6 Slc30a4 Slc34a2 Slc37a2 Slc38a4 Slc38a6 Slc39a12 Slc39a14 Slc39a2 Slc40a1 Slc41a2 Slc43a3 Slc44a2 Slc46a1 Slc46a3 Slc4a11 Slc52a3 Slc5a3 Slc5a6 Slc6a12 Slc6a4 Slc6a8 Slc7a11 Slc7a2 Slc7a8 Slc9a2 Slc9a3r2 Slc9a4 Slc9a7 Slc9b1 Slc9b2 Slco2a1 Slco2b1 Slco3a1 Slfn1 Slfn4 Slfn5 Slfn8 Slfn9 Slirp Slpi Smad3 Smad6 Smagp Smc2 Smim5 Smo Smox Smpdl3b Smtn Smyd2 Snai1 Snai2 Snn Snrpg Sntb1 Snx24 Snx7 Socs1 Socs2 Socs3 Sod3 Sorl1 Sort1 Sox13 Sox17 Sox18 Sox4 Sox7 Sox9 Sp100 Spag11b Spata13 Spats2 Spc24 Spc25 Spdl1 Speg Sphk1 Spic Spink2 Spint1 Spint2 Spire1 Spn Spns1 Spns2 Spock2 Spon1 Spp1 Spred1 Spred3 Spry2 Spry4 Spsb1 Src Srgap3 Srgn Srm Srxn1 Ssbp2 Ssc5d Sstr4 St18 St3gal5 St5 St6galnac2 St7 St8sia4 St8sia6 Stab1 Stac2 Stap1 Stat4 Stc1 Steap2 Steap3 Stk10 Stk39 Stmn1 Stmn2 Ston1 Ston2 Stra6l Strip2 Stx11 Stxbp6 Sulf2 Sult1a1 Sult2b1 Susd1 Susd3 Syce2 Syn1 Syne1 Syne2 Syngr1 Synj2 Synpo Synpo2 Syp Syt11 Tacc2 Tacc3 Tagap Tagln Tanc2 Tap1 Tarm1 Tbc1d2 Tbc1d4 Tbc1d8 Tbx2 Tbx3 Tc2n Tcea3 Tcf19 Tcf21 Tcf4 Tcf7 Tcf7l1 Tcf7l2 Tctex1d2 Tead1 Tead2 Tead4 Tek Tenm4 Tes Tex22 Tfap2a Tfec Tgfb1i1 Tgfb3 Tgfbi Tgfbr3 Tgm1 Tgm3 Tgtp1 Tgtp2 Thbd Thbs1 Thbs2 Thop1 Thsd1 Tiam1 Tiam2 Tie1 Tifa Timd4 Timp1 Timp3 Tinagl1 Tipin Tk1 Tle6 Tlr1 Tlr12 Tlr4 Tlr5 Tlr9 Tm4sf19 Tma7 Tmc6 Tmc8 Tmem100 Tmem107 Tmem119 Tmem138 Tmem150a Tmem151a Tmem154 Tmem171 Tmem176a Tmem176b Tmem204 Tmem216 Tmem238 Tmem243 Tmem26 Tmem37 Tmem41a Tmem47 Tmem64 Tmem71 Tmem86a Tmem88 Tmem98 Tmtc2 Tnc Tnfaip2 Tnfaip6 Tnfrsf10b Tnfrsf14 Tnfrsf18 Tnfrsf22 Tnfrsf23 Tnfrsf26 Tnfrsf9 Tnfsf13 Tnfsf14 Tnfsf9 Tnip3 Tnk2 Tns1 Tns3 Tob1 Tomm6 Top2a Tox2 Tpcn1 Tpi1 Tpk1 Tpm1 Tpm2 Tppp Tppp3 Tpx2 Traf1 Traf3ip2 Traf3ip3 Traf4 Trdmt1 Trem2 Trem3 Treml2 Treml4 Trf Trib2 Trib3 Trim13 Trim2 Trim29 Trim30b Trim30c Trim46 Trim47 Trim7 Trip6 Trp53i11 Trpm2 Tsen15 Tsku Tspan12 Tspan13 Tspan18 Tspan2 Tspan3 Tspan32 Tspan33 Tspan4 Tspan7 Ttc23 Ttc39b Ttyh2 Tuba1a Tuba1b Tubb2a Tubb3 Twist1 Twist2 Tyms Uaca Ube2c Ucp3 Ugt1a8 Uhrf1 Unc119 Unc13d Unc5a Unc5b Ung Upb1 Upk3b Upp1 Usp18 Usp43 Usp49 Ust Utrn Vangl1 Vasn Vat1 Vav2 Vav3 Vcam1 Vcan Vcl Vdr Vegfa Vegfb Vegfc Vill Vipr2 Vkorc1l1 Vldlr Vnn3 Vps37b Vstm2a Vtn Wdr34 Wdr76 Wfdc10 Wfdc17 Wfdc2 Wfdc21 Wisp1 Wnt11 Wnt5a Wnt7b Wwtr1 Xaf1 Xdh Xlr Xrcc5 Xylb Xylt2 Yap1 Zbp1 Zbtb16 Zbtb46 Zc3h12c Zcchc11 Zcchc24 Zdhhc14 Zdhhc2 Zeb1 Zfand2a Zfhx3 Zfp125 Zfp296 Zfp366 Zfp36l1 Zfp428 Zfp462 Zfp467 Zfp516 Zfp580 Zfp770 Zfp821 Zfp827 Zfp935 Zfp948 Zfyve9 Zhx2 Zic2 Zmynd15 Zranb3 Genes upregulated in MacA-2wk vs MacA-N Symbol logFC logCPM PValue FDR Lum 10.9603 3.801 0 0 Dkk2 10.812 3.6185 0 0 Hmga2 9.3344 4.4417 0 0 Twist1 9.2808 2.0976 0 0 Bcat1 9.2712 2.0926 0 0 Ptn 9.0747 1.8433 0 0 Etv4 8.4289 1.2141 0 0 Rhox2h 7.9382 0.7562 0 0.0004 Saa3 7.0605 -0.1753 0.0001 0.0137 Arg1 6.9062 3.2543 0 0 Serpinf1 6.6155 3.5105 0 0 Il1rl1 6.303 3.1955 0 0 C1qc 6.2819 4.1952 0 0 Gpx8 6.2129 1.3321 0 0.0002 Flnc 5.7935 3.4288 0 0 C1qa 5.5528 4.2871 0 0 Egln3 5.4388 3.119 0 0 Gja1 5.2862 5.2954 0 0 Peg10 5.1564 4.0888 0 0 Sox9 5.1221 2.8115 0 0.0001 Fscn1 5.0107 4.6104 0 0 AA467197 4.8455 3.3034 0 0 Prrx1 4.703 4.685 0 0 C3ar1 4.6783 4.2001 0 0 Nptx1 4.5585 4.0506 0 0 Ank 4.2669 4.7918 0 0 C1qb 4.1848 4.5883 0 0 Col3a1 4.1721 7.0599 0 0 Steap2 4.1692 3.4994 0 0 Ak1 4.0768 1.9845 0.0003 0.0234 Dnm1 3.895 2.5682 0 0 Oas3 3.8614 4.2996 0 0 Tsku 3.7976 3.41 0 0 Ier5l 3.6268 3.3468 0 0.0002 Igf2r 3.5442 4.1816 0 0 Ifi27l2a 3.5278 1.1772 0 0 Mmp14 3.5219 4.4728 0 0 Fgfr1 3.5149 4.024 0 0 Lpar1 3.4298 1.5359 0 0.0025 Sdc1 3.4041 3.2627 0 0 Slc6a8 3.3696 4.6415 0 0 Ncam1 3.3515 1.0484 0 0.0008 S100a6 3.3181 5.4606 0 0 Flrt2 3.3136 3.7034 0 0.0013 Col16a1 3.3004 1.3952 0.0005 0.0353 Htra1 3.2894 2.5939 0 0 Igfbp4 3.2701 6.4414 0 0 Msr1 3.217 5.2838 0 0 Met 3.1754 3.4567 0 0 Cxcl9 3.0665 4.0039 0 0 Serpinh1 3.0036 5.8496 0 0.0003 Adam8 2.9934 3.835 0 0 Dcn 2.979 4.9939 0 0 Slc40a1 2.939 4.5548 0 0.0017 Lamb1 2.9344 4.4204 0 0 Fam20c 2.9266 3.8891 0 0 Angptl2 2.9218 3.9139 0 0 Ppic 2.9162 2.5614 0 0.0017 Timp1 2.9146 1.0263 0.0001 0.0069 Bmp1 2.9092 2.2441 0 0.0028 Aif1 2.8862 0.3681 0 0.0003 Ddr2 2.884 4.6701 0 0 Mmp12 2.86 5.3105 0 0 Nid1 2.8548 5.5353 0 0 Hspg2 2.8509 5.4119 0 0 Dpysl3 2.8458 4.255 0 0.0003 Tead2 2.8194 2.1677 0.0001 0.0078 Vcan 2.8091 4.9717 0 0 Pla2g7 2.7578 4.067 0 0 Irf7 2.7478 4.193 0 0 Ifit1 2.7141 3.7658 0 0 Il6 2.6797 2.204 0.0002 0.021 Syngr1 2.6631 1.5191 0 0.0019 Apln 2.6533 3.355 0.0005 0.0407 Pcolce 2.6403 4.0638 0 0.0001 Pear1 2.6353 2.0763 0.0003 0.0232 Mnda 2.5989 2.9863 0 0 Mafb 2.5969 5.1555 0 0 Prkcdbp 2.5921 2.4041 0.0003 0.0244 Spry4 2.578 4.0894 0.0001 0.007 Prnp 2.5777 2.4233 0.0001 0.0137 Ptgs1 2.5761 5.377 0 0 Krt18 2.5595 2.705 0.0003 0.0274 Abcc3 2.5395 2.0842 0 0 Sdc4 2.5347 4.5725 0 0.0001 Oasl2 2.527 4.7568 0 0 Ckap4 2.5202 4.1775 0 0 Ikbke 2.5175 2.9813 0 0 Iigp1 2.5136 3.2778 0 0.0002
Genes downregulated in MacA-2wk vs MacA-N Symbol logFC logCPM PValue FDR Scgb1a1 -3.3349 8.7934 0 0.0009
Genes upregulated in MacB3-3wk vs MacB3-2wk Symbol logFC logCPM PValue FDR Rhox2h 6.1922 1.6815 0 0.0013 Sertad4 4.1735 3.3315 0 0.0021 Prg4 3.6116 7.2485 0 0 Osr2 3.4672 4.0176 0.0001 0.0339 Ptn 3.3507 4.902 0 0 Rhox2d 3.3069 1.6999 0.0001 0.0272 Fstl3 3.298 2.7251 0.0001 0.0167 Dcn 3.2632 6.6456 0 0.0001 Cdc42ep5 3.1187 2.3035 0 0.0037 Tnc 3.0894 5.3852 0 0.0056 Prrx1 3.0647 5.744 0 0.0008 Hspb8 3.0221 2.6363 0 0.0089 Etv4 2.9153 2.5319 0 0.0092 Sdc2 2.8588 4.1438 0 0.0011 Nhsl1 2.8536 3.4476 0 0.0005 Peg10 2.8131 5.2545 0 0.0024 Stc1 2.8073 4.3516 0 0.0056 Bmp1 2.7849 4.8307 0 0.0077 Kirrel 2.7647 4.795 0 0.0026 Marco 2.7374 4.8168 0.0002 0.0476 Aspn 2.705 3.4653 0 0.0153 Dkk2 2.6991 5.6633 0 0.0008 Thbs2 2.6956 4.8353 0 0.0095 Col18a1 2.6949 6.0673 0 0.0001 Krt18 2.6619 3.8718 0.0001 0.0272 Lum 2.6587 4.4799 0.0002 0.0436 Dnm1 2.6289 4.788 0 0.0007 Tcf7l1 2.6083 3.8778 0 0.0055 Lamb1 2.6001 5.9292 0 0.0004 Islr 2.5891 3.017 0 0.0123 Apcdd1 2.5743 4.6888 0 0.0084 Dpt 2.569 4.1147 0.0001 0.0311 Hspg2 2.5455 7.7673 0 0.0003 Flnc 2.5413 5.8236 0 0.0015 Cd248 2.505 4.2082 0.0001 0.0251
Genes downregulated in MacB3-3wk vs MacB3-2wk Symbol logFC logCPM PValue FDR Fmo1 -3.0335 2.9927 0 0.0055 Cxcl13 -2.9294 3.4168 0 0.0111 Cldn5 -2.6429 3.009 0 0.0123 Tmem100 -2.54 2.7681 0 0.0114 Genes upregulated in MacB2-3wk vs MacB2-N Symbol logFC logCPM PValue FDR Ptprn 11.7066 4.6885 0 0 Dusp9 11.2658 4.2527 0 0 Lrrc15 11.2091 4.1936 0 0 Ereg 10.6789 3.6702 0 0 Kera 10.6245 3.5942 0 0 Foxg1 10.6105 3.6045 0 0 Etv4 10.5823 3.5729 0 0 Slc38a4 10.5571 3.5321 0 0 Dlx2 10.5314 3.5373 0 0 Rgs16 10.1241 3.1177 0 0 Rad51 9.8672 2.8509 0 0 Ngf 9.8436 2.8173 0 0 Hoxd8 9.7322 2.7197 0 0 Rhox2d 9.7192 2.7005 0 0 Osr2 9.6486 5.023 0 0 Twist1 9.4802 4.8644 0 0 Rhox2g 9.3929 2.3761 0 0 Pthlh 9.3847 2.3738 0 0 Fam64a 9.3004 2.2959 0 0 Dlx1 9.283 2.2784 0 0.0001 Rhox2h 9.2474 2.2336 0 0 Plac1 9.2384 2.2099 0 0 Thbs2 9.2098 5.9681 0 0 Grem1 9.1194 4.4961 0 0 Car6 9.1056 2.1059 0 0 Ptn 9.0822 5.8482 0 0 Nkx2-2 8.9484 1.945 0 0 Arg1 8.8698 7.5557 0 0 Prl2c2 8.8687 1.8735 0 0.0001 Hmga2 8.7028 6.981 0 0 Dkk2 8.6541 6.761 0 0 Sertad4 8.6134 3.9791 0 0 Prl2c3 8.4508 1.4445 0 0.0001 Oscar 8.4192 1.4231 0 0 Fhl2 8.2883 3.6631 0 0 Mcoln3 8.2853 1.2892 0 0 Bnc1 8.2579 3.6282 0 0 Gchfr 8.2317 1.2397 0 0.0001 Ak4 8.2134 1.2063 0 0.0001 Insl6 8.176 1.1848 0 0 Slc9b1 7.9733 0.9562 0 0 Pif1 7.9513 0.9477 0 0 Aif1l 7.8834 0.8806 0 0 Acsbg1 7.8834 0.8987 0 0 Glrp1 7.8834 0.8749 0 0 Sox9 7.819 6.0999 0 0 Ccl8 7.7876 0.7596 0 0 Plk1 7.6328 3.8775 0 0 Tenm4 7.6031 7.0106 0 0 Zic2 7.4761 3.7137 0 0 Ccdc136 7.4549 0.4758 0 0.0001 2200002D07.3912 0.3835 0.0001 0.0014 Flnc 7.2362 6.6522 0 0 Tnc 7.1801 6.258 0 0 Igf2bp2 7.1513 5.7205 0 0 Arntl2 7.1036 0.0854 0.0006 0.0095 Gm773 7.0632 0.0386 0.0003 0.0052 Lum 7.0592 6.0421 0 0 Ccnb2 6.9674 3.2252 0 0 Peg10 6.9662 6.3776 0 0 Prrx1 6.8975 6.9796 0 0 Lrrc17 6.7888 3.5653 0 0 Mmp12 6.7668 5.7974 0 0 Scara3 6.7532 4.2258 0 0 Kif18b 6.7046 2.9584 0 0 Gli3 6.6739 4.9679 0 0 Aspn 6.6426 4.3511 0 0 Epb4.1l3 6.6324 3.4123 0 0 Clstn3 6.5953 2.8515 0 0 Cxcl3 6.5939 7.1272 0 0 AA467197 6.4986 5.5179 0 0 Twist2 6.4388 3.2238 0 0 Wnt7b 6.3945 4.3306 0 0 Rtkn 6.3674 3.5397 0 0 Il1rl1 6.3448 5.7703 0 0 Hist1h2ah 6.2564 4.1976 0 0 Lrig1 6.2246 5.4164 0 0 Fah 6.1747 2.4228 0 0 Cd109 6.1733 4.3124 0 0 Timp1 6.1294 4.0718 0 0 Tfap2a 6.0925 4.3883 0 0 Nptxr 6.0641 3.2553 0 0 Stc1 6.0451 5.1539 0 0 Dctd 5.987 2.248 0 0 Ctsk 5.9681 5.5456 0 0 Ect2 5.9594 2.2244 0 0 Fscn1 5.9313 7.1339 0 0 Matn2 5.9063 3.8531 0 0 Fkbp11 5.898 1.3078 0 0.0001 Bub1 5.8974 3.371 0 0 Lgi2 5.8792 3.816 0 0 E2f7 5.8425 3.33 0 0 Ube2c 5.8282 5.3389 0 0 Cpe 5.8146 4.627 0 0 Spp1 5.7829 8.1197 0 0 Dnph1 5.7816 2.0487 0 0 Serpinf1 5.7768 5.6292 0 0 Hist1h3g 5.7464 5.095 0 0 Gpnmb 5.7345 7.591 0 0 Gja1 5.6798 7.334 0 0 Spc24 5.5666 1.8337 0 0 Sdr39u1 5.5335 2.3452 0 0 Nav3 5.5119 3.8057 0 0 Six4 5.5009 4.2197 0 0 Col3a1 5.4624 9.8468 0 0 Nuf2 5.4614 2.6461 0 0 Nptx1 5.4606 6.3665 0 0 Phgdh 5.4375 3.5745 0 0 Uhrf1 5.4092 4.6189 0 0 Mapk8ip1 5.4008 3.5533 0 0 Apcdd1 5.3828 5.4484 0 0 Steap2 5.3695 5.1809 0 0 Cda 5.3684 2.5432 0 0 Rab34 5.346 2.5369 0 0 Nos2 5.3139 4.3403 0 0 Hist1h3c 5.3086 6.1465 0 0 Col18a1 5.2973 6.7855 0 0 Flrt2 5.2966 5.5295 0 0 Tnfrsf22 5.2692 2.0822 0 0 Mmp9 5.2618 8.287 0 0 Lrr1 5.2436 0.6516 0 0.0003 Spats2 5.2291 3.8275 0 0 Ccna2 5.2276 5.1983 0 0 Inhba 5.2219 4.9374 0 0 Rcor2 5.1934 3.3347 0 0 Prune2 5.1814 5.2962 0 0 Col8a1 5.1342 4.2438 0 0 Cdc20 5.1209 3.7323 0 0 Sgol1 5.1164 1.9243 0 0 Arhgap22 5.1063 4.6377 0 0 Pdgfc 5.0882 4.2251 0 0 Mmp14 5.0738 7.6307 0 0 Ccbe1 4.9841 5.9946 0 0 Spint1 4.9712 4.5021 0 0 Mfsd2a 4.9709 0.3988 0.0002 0.0031 Egln3 4.9551 5.8238 0 0 Bmp1 4.9364 5.4824 0 0 Col16a1 4.9243 4.5689 0 0 Nr2f1 4.9073 3.234 0 0 Ccl7 4.9026 4.1382 0 0 Dpysl3 4.8877 6.2663 0 0 Rgs17 4.8684 2.619 0 0 Prkg2 4.8559 4.155 0 0 Obsl1 4.7761 3.7246 0 0 Rundc3a 4.7655 2.5109 0 0.0002 Cxcl1 4.7431 5.5 0 0 Ptges 4.7359 5.8376 0 0 Cenpf 4.7285 4.6675 0 0 Birc5 4.7224 3.8731 0 0 Dnm1 4.6993 5.5774 0 0 Col5a1 4.689 6.8952 0 0 Fgfr1 4.6775 6.5946 0 0 Dcn 4.6741 7.8546 0 0 Hspb8 4.6733 3.8086 0 0 Serpinb2 4.6612 4.3419 0 0 Eya1 4.6422 3.881 0 0 Mt2 4.6304 4.7335 0 0 Slc30a4 4.6252 5.3191 0 0 Htra1 4.6052 5.5315 0 0 Tk1 4.5787 2.9175 0 0 Krt18 4.5613 4.9455 0 0 Fcrlb 4.5609 3.3245 0 0 Il33 4.5427 3.9994 0 0 Lamb1 4.5236 7.0224 0 0 Bcat1 4.5192 3.4631 0 0 Spry2 4.5133 5.0449 0 0 Adamtsl3 4.5073 4.0974 0 0 Hspg2 4.5007 8.7475 0 0 Gpc1 4.4951 6.2911 0 0 Zfp428 4.4921 1.3412 0.0001 0.0016 Spc25 4.4705 2.2215 0 0 Il7r 4.4676 4.0195 0 0 Tpm2 4.4659 4.2576 0 0 Arhgef40 4.4343 5.0657 0 0 Ak1 4.4251 3.3954 0.0002 0.0036 Btbd11 4.4035 3.794 0 0 Adamts14 4.3888 4.2276 0 0 Adm 4.3543 3.1015 0 0 Tnfrsf9 4.327 1.8568 0 0.0002 Actn1 4.3135 7.4011 0 0 Prrg4 4.3108 3.273 0 0 Medag 4.3098 2.4987 0 0 Top2a 4.3062 5.5318 0 0 Lhfpl2 4.2721 5.392 0 0 Asns 4.2687 4.0027 0 0 Igfbp4 4.2674 8.958 0 0 Sh3bgrl2 4.2574 4.568 0 0 Ssc5d 4.2508 4.4998 0 0 Pcolce 4.2339 6.5853 0 0 Unc5a 4.2303 3.0095 0 0 Spsb1 4.2292 4.5923 0 0 Islr 4.2159 4.019 0 0 Saa3 4.2157 3.73 0 0.0009 C77080 4.2108 5.4385 0 0 Pcbp4 4.2102 3.8356 0 0 Kcnq5 4.2005 4.1431 0 0 Smyd2 4.1817 3.4973 0 0 Usp43 4.1787 2.9401 0 0 Chpf 4.1757 5.6875 0 0 Hist1h3b 4.1684 4.6463 0 0 Map1b 4.1681 7.7376 0 0 Gpr153 4.1651 4.232 0 0 Nrn1 4.1592 2.1558 0 0.0003 Ccnf 4.1573 3.3262 0 0 Cdca3 4.1468 1.95 0 0 Ahnak2 4.1468 6.0525 0 0 Kirrel 4.1401 5.6768 0 0 Pcdh7 4.1341 4.7825 0 0 Vegfb 4.0746 3.9495 0 0 Ltc4s 4.0448 3.4939 0 0 Myc 4.0384 8.8914 0 0 Cdca8 4.0359 2.9089 0 0 Syn1 4.0344 4.0143 0 0 Cdk1 4.0313 2.223 0 0 Slc9b2 4.0308 1.2602 0.0001 0.0014 Anpep 4.0276 6.5413 0 0 Foxm1 3.9954 4.4522 0 0 Tpx2 3.9918 4.4814 0 0 2810417H13.9487 3.8625 0 0 Mki67 3.9474 6.831 0 0 Pdpn 3.9361 6.1125 0 0 Myo1e 3.9344 5.8057 0 0 Hist1h2bm3.93 4.1364 0 0 Rgma 3.928 4.6289 0 0 Aebp1 3.9232 6.164 0 0 Rai14 3.9092 5.5816 0 0 Rhov 3.9061 4.5172 0 0 Sdc1 3.9058 6.2789 0 0 BC055324 3.9053 1.7202 0 0 Anln 3.9037 4.6847 0 0 Adcy3 3.8974 4.1687 0 0 Lpar1 3.8768 3.6338 0 0 Loxl3 3.8693 4.1162 0 0 Ckap2 3.8652 3.1133 0 0 Fkbp10 3.8638 4.8907 0 0 Cdc42ep5 3.86 3.1307 0 0 Chaf1a 3.8524 3.4426 0 0 Cks1b 3.8501 3.7849 0 0 Ank3 3.8409 4.5664 0 0 Nek6 3.837 4.5436 0 0 A930004D 3.8155 1.3861 0 0.0003 Ppic 3.8152 4.7786 0 0 Csgalnact1 3.8028 3.8337 0 0 Zfp827 3.7881 4.4503 0 0 Tspan4 3.7838 3.1344 0 0 Mif 3.7807 7.7256 0 0 Fam92a 3.7802 1.9763 0 0.0002 Ptpla 3.7802 2.0116 0 0 Rbpms2 3.7765 2.9511 0 0.0008 Marco 3.7655 4.9706 0 0.0001 B3gnt9 3.7639 3.0108 0 0 Wisp1 3.7595 3.5137 0.0001 0.0012 Syngr1 3.7531 2.9617 0 0 Unc5b 3.751 5.145 0 0 Plau 3.7435 4.8218 0 0 Serpine1 3.7429 6.15 0 0 Ccl12 3.7338 1.9569 0 0.0001 Prc1 3.719 3.8132 0 0 Spdl1 3.7182 1.7609 0 0 Fstl1 3.7151 5.4118 0 0 Col6a3 3.7127 7.5836 0 0 Wfdc21 3.71 1.9438 0 0 Igf2r 3.706 6.1984 0 0 Cdc7 3.6973 1.5304 0 0 Cald1 3.6837 8.2872 0 0 Traf4 3.6728 4.2782 0 0 Slc16a1 3.6722 5.6341 0 0 Nkain1 3.6532 3.4701 0 0.0002 Stac2 3.6015 3.4195 0 0 Akr1b8 3.5927 3.388 0 0 Acp5 3.5903 6.9213 0 0 Psrc1 3.5847 1.8381 0 0.0001 Dcbld2 3.5792 4.0566 0 0 Hic1 3.5777 5.6207 0 0 Chst11 3.5619 5.8294 0 0 Gas1 3.5599 4.2436 0 0 Nid1 3.5468 7.7034 0 0 Ntn1 3.5306 6.9928 0 0 Hmgn3 3.5248 4.1513 0 0.0001 Hist1h2af 3.5242 2.795 0 0 Trp53i11 3.5048 5.4732 0 0 Egfr 3.5035 5.4842 0 0 Angptl2 3.5031 5.9293 0 0 Vasn 3.5026 4.8072 0 0 Slc6a8 3.5021 5.8095 0 0 Basp1 3.5015 7.2405 0 0 C3ar1 3.501 7.1931 0 0 Parp16 3.4994 2.6216 0 0 Hoxa7 3.4983 3.5975 0.0004 0.0062 Il18rap 3.497 4.5685 0 0 Mrps6 3.4925 3.1662 0 0 Col6a1 3.4604 6.5858 0 0 Prkcdbp 3.448 4.3628 0 0 Hist1h2bl 3.4421 2.1249 0.0003 0.0053 Shmt2 3.4392 5.8565 0 0 Nusap1 3.4285 3.5827 0 0 Farp1 3.4274 5.3185 0 0 Tgfb3 3.4226 4.8096 0 0 Clmp 3.4192 5.3027 0 0 Il1r1 3.4181 5.3039 0 0 Cul7 3.4169 5.7477 0 0 Sdc4 3.4154 6.9772 0 0 Cd63 3.4135 3.9622 0 0 Tyms 3.4104 3.3241 0 0 Nphp1 3.3991 2.0814 0 0.0001 Rbfox2 3.3975 5.5115 0 0 Bhlhe41 3.3931 4.9249 0 0 Rrm2 3.3761 4.7312 0 0 Dab2 3.3714 7.8092 0 0 Plod2 3.3648 5.0417 0 0 Krt8 3.3638 3.6529 0 0.0003 Cit 3.3607 3.8252 0 0 Cd276 3.3585 5.3069 0 0 Nme4 3.3525 1.7674 0.0001 0.0017 Nt5e 3.3484 3.8866 0 0 C330027C03.3468 2.2516 0 0 Oaf 3.343 5.2127 0 0 Leprel2 3.3344 3.0169 0 0 Mcm6 3.3206 5.495 0 0 Tsen15 3.3139 2.6525 0 0 Nek2 3.3116 2.9274 0 0 Tnfrsf23 3.3003 3.945 0 0 Gpr124 3.2982 5.1195 0 0 Gjc1 3.2853 2.7605 0.0002 0.0033 Tpm1 3.2836 6.7156 0 0 Procr 3.2819 3.6707 0 0 Kifc1 3.2602 2.5762 0 0 Sh3pxd2b 3.2564 8.2326 0 0 Tcf7l1 3.2554 4.8234 0 0 Dpt 3.2543 5.2837 0 0 Fhl3 3.2519 5.3976 0 0 Ltbp3 3.2388 5.7623 0 0 Nrp2 3.235 7.7059 0 0 2700081O13.2349 4.3324 0 0 Tubb3 3.2147 2.6933 0.0004 0.0062 Osr1 3.2062 3.4719 0.0003 0.0046 Cad 3.2058 4.9378 0 0 Lrp12 3.1881 4.4244 0 0 Serpinh1 3.1827 7.5376 0 0 Arhgap10 3.1781 4.7062 0 0 F7 3.1664 4.0147 0 0 Hist1h2ab 3.1535 6.6506 0 0 Mcm7 3.1496 4.5553 0 0 Sema3a 3.1494 4.6818 0 0.0011 S100a8 3.1422 3.4794 0 0.0003 Clip3 3.1356 4.1879 0 0.0003 Maged1 3.1352 6.3763 0 0 Mpzl1 3.1345 3.6672 0 0.0007 Sept5 3.1339 1.7088 0.0001 0.0019 Cd248 3.1244 5.3628 0 0 Col6a2 3.1122 6.1198 0 0 Fblim1 3.0967 5.1111 0 0 Epb4.1l1 3.0951 5.3625 0 0 Dagla 3.088 4.6802 0 0 Hist1h2bk 3.086 2.5834 0 0 Sdc2 3.0728 5.3479 0 0 Ccne1 3.0716 1.368 0 0.0007 Prg4 3.0715 7.7563 0 0 Trim47 3.0708 4.3201 0 0 Fbn1 3.066 7.1398 0 0 Bag2 3.0602 2.8504 0.0003 0.0047 Atp6v0d2 3.0553 5.3093 0 0 Gnb4 3.0551 4.0487 0 0 Crtap 3.0458 4.5239 0 0 Rab4a 3.0427 2.6769 0 0.0002 Slc41a2 3.0393 3.6466 0 0 Wdr34 3.0338 1.3257 0.0004 0.0069 Src 3.0292 5.1725 0 0 Serpinb6a 3.0262 4.5637 0 0 Lama5 3.0178 5.6032 0 0 Pf4 3.0079 5.1052 0 0 Serf1 2.9984 3.3537 0 0 Etv1 2.9968 3.9447 0 0.0001 Hells 2.9961 4.1345 0 0 F3 2.9946 3.4174 0.0003 0.0047 Ero1l 2.9845 5.4929 0 0 Gpx8 2.9783 3.2474 0.0005 0.0078 Itpr3 2.9722 5.769 0 0 Hmgn1 2.9695 5.1822 0 0 Lig1 2.9679 3.5572 0 0 Emp1 2.9668 7.8497 0 0 Kdelr3 2.963 2.2428 0.0027 0.0326 Pcgf2 2.9426 3.9432 0 0 Micall2 2.9421 4.7846 0 0 Il1a 2.9416 4.6123 0 0 Tcf19 2.9369 3.4924 0 0 Pard3 2.9288 4.3156 0 0 Ccl24 2.9281 3.2203 0 0.0004 Pdgfa 2.9258 4.0469 0 0 Mast4 2.9223 6.669 0 0 Tipin 2.9205 2.0163 0.0002 0.0029 Dst 2.9154 7.4012 0 0 Mad2l1 2.9114 4.1576 0 0 1810011O12.891 6.2183 0 0 Creb5 2.886 5.0225 0 0 Ankrd13b 2.874 4.122 0 0 Lmna 2.8452 7.6234 0 0 Rcn1 2.8407 4.6211 0 0.0001 Etv5 2.8407 4.6537 0 0 Sema4c 2.8363 5.3005 0 0 Fcrls 2.8362 3.75 0 0 Synpo 2.8346 5.9818 0 0 Spred3 2.8278 3.9701 0 0 Il1rn 2.8246 8.1814 0 0 Ptpn14 2.823 5.6249 0 0 Cd72 2.8221 3.1413 0 0 Vdr 2.8127 4.1432 0 0 Ramp3 2.8056 2.2622 0.0001 0.0016 Gys1 2.804 4.7885 0 0 Vcam1 2.8026 5.2467 0 0 Dut 2.7991 3.908 0 0 Nedd4 2.7955 7.6221 0 0 Col1a1 2.7728 7.224 0 0 Cenpv 2.7664 2.0555 0 0.0001 Ctsl 2.7662 7.0409 0 0 Ndc1 2.7528 3.586 0 0 Ltbp1 2.752 5.7251 0 0 Zfp462 2.7465 5.6971 0 0 Sac3d1 2.7451 2.7452 0 0 Smo 2.7432 4.4355 0 0.0001 Cxcl9 2.7371 5.2424 0 0 Rhoc 2.7368 5.9984 0 0 Cdca7 2.7357 2.4835 0 0 Cep170b 2.7326 4.9063 0 0 Tead1 2.7305 6.556 0 0 Hist1h2bh 2.726 4.1766 0 0 Ppfibp1 2.7185 5.4438 0 0 Ifitm1 2.7179 5.5832 0 0 Srgap3 2.7128 4.3305 0 0 Lamc1 2.7123 7.2088 0 0 Lrg1 2.7097 4.6606 0 0 Mmp11 2.7034 2.0653 0.0017 0.0215 Mt1 2.7015 6.9297 0 0 Tes 2.6971 6.9146 0 0 Ddr2 2.6946 6.0279 0 0 Rhbdf1 2.6913 3.6497 0 0 Ctxn1 2.6827 3.2923 0.0001 0.0015 Ttyh2 2.6821 4.2588 0 0 B3gnt3 2.6737 5.1312 0 0 Plk4 2.6721 3.324 0 0 Mcm2 2.6704 4.3195 0 0 Ppa1 2.6664 4.2598 0 0 Bnip3 2.6599 5.4776 0 0 Slc27a1 2.6588 3.7735 0 0 Srm 2.6558 5.1183 0 0 Lgals1 2.6446 7.1401 0 0 Apbb2 2.6443 5.9518 0 0 Rfc3 2.6401 2.9097 0 0 Slc39a14 2.6381 5.8836 0 0 Slc20a2 2.6355 3.9603 0 0 Slc2a1 2.6314 8.6414 0 0 Cxxc5 2.6283 3.8795 0.0001 0.0012 Hmga1 2.6212 7.9257 0 0 Dbn1 2.6056 3.1952 0.0006 0.0094 Rnf128 2.6048 3.3728 0 0 Cbx5 2.5846 5.9754 0 0 Trib3 2.5838 2.8019 0 0 Snai1 2.5776 5.6521 0 0 Efemp2 2.5661 3.7999 0 0 Six1 2.5654 2.274 0.0002 0.0037 Dennd2a 2.5642 4.4799 0 0 Gpr84 2.5637 2.9236 0 0 Rrm1 2.5605 4.7463 0 0 Bace1 2.5379 4.6695 0 0.0005 Prnp 2.536 4.1436 0.0002 0.0033 Hist1h4f 2.5304 5.6081 0 0 Dmkn 2.5284 3.0276 0 0.0009 Mcm5 2.5199 4.4145 0 0 Dlg5 2.5199 4.4022 0.0004 0.0059 Map3k12 2.5124 3.247 0 0.0002 Ccr5 2.5101 6.7221 0 0 C1qb 2.5001 7.3935 0 0
Genes downregulated in MacB2-3wk vs MacB2-N Symbol logFC logCPM PValue FDR Fgfr4 -7.4816 0.315 0.0001 0.0012 Hba-a2 -6.8118 2.2316 0.0001 0.0021 Cyp2a5 -6.0149 1.3373 0 0.0008 Clic3 -4.8134 2.6302 0 0.0006 Hbb-b1 -4.6941 5.8159 0 0.0003 Hba-a1 -4.6325 2.389 0.0006 0.0086 Cyp2f2 -4.2497 6.6145 0 0 Tmem100 -4.2128 4.883 0 0 Ctla2a -4.1046 2.2357 0.0006 0.0094 S1pr5 -3.8802 4.9019 0 0 Fmo1 -3.8725 5.1349 0 0 Hbb-b2 -3.7486 3.4454 0.0017 0.0221 Cyp4b1 -3.706 4.5348 0 0 Aldh1a1 -3.6927 3.8258 0 0 Cd300e -3.6835 4.2289 0 0 Gsta3 -3.6632 2.1536 0.0011 0.015 Palmd -3.6036 3.1418 0 0 Cldn18 -3.5576 4.972 0 0.0002 Gjb2 -3.5159 3.0034 0 0 Sec14l3 -3.4423 5.1126 0 0 Adrb1 -3.4246 3.2576 0 0 Bmp6 -3.4219 4.2144 0 0 Scgb1a1 -3.3968 10.1718 0 0.0001 Nebl -3.3959 3.3866 0 0.0002 Sstr4 -3.3767 1.5723 0 0.0002 Nckap5 -3.371 3.8381 0 0 Tspan7 -3.3613 5.8693 0 0.0001 Wnt11 -3.3221 4.3068 0 0 Epas1 -3.3204 9.2396 0 0 Scn7a -3.2784 5.6621 0 0 Cyyr1 -3.2766 5.3347 0 0 Tek -3.2197 4.1679 0 0.0001 Mapt -3.1845 3.6797 0 0.0005 Sema3g -3.1685 4.2663 0 0.0001 Myct1 -3.1514 3.7146 0 0.0005 Chad -3.1358 2.1933 0.0001 0.0024 Cd55 -3.1286 3.2865 0 0 Myzap -3.1249 2.4638 0 0.0001 Glp1r -3.1199 3.5708 0.0003 0.005 Npnt -3.1125 5.1682 0 0 Ces1d -3.0884 1.4584 0.0014 0.0188 Hpgd -3.0803 7.2134 0 0 Clic5 -3.0738 5.7352 0 0 Fmo2 -3.0641 5.4175 0 0.0001 Tspan18 -3.0561 5.7765 0 0 Clec14a -3.0512 5.1387 0 0.0003 Zbtb16 -3.0351 5.3478 0 0 Scgb3a2 -3.0072 5.176 0.0002 0.0029 Pcp4l1 -2.9902 3.1681 0 0 Inmt -2.9821 5.0637 0 0.0002 Sema3c -2.9523 5.3956 0 0.0001 Cldn5 -2.9327 4.928 0 0.0001 Il27 -2.9292 1.3098 0.002 0.0255 Cox4i2 -2.9263 2.1329 0.001 0.0144 Arl4d -2.9207 2.5749 0.0002 0.004 Gpr116 -2.9109 7.5155 0 0 Aox3 -2.892 1.6999 0.0002 0.0031 Hs3st1 -2.8624 2.7624 0.0006 0.0088 Cadm3 -2.8483 2.3794 0 0 Limch1 -2.8423 4.9258 0 0 Hmcn1 -2.8315 4.3928 0 0.0002 Ager -2.8198 4.0395 0.0006 0.009 Slc46a3 -2.801 4.5848 0 0 Itga8 -2.7967 3.9672 0 0.0001 Prrg1 -2.7904 1.9817 0.0005 0.0081 Akap5 -2.7868 4.6067 0 0 Gucy1a3 -2.77 4.2983 0.0003 0.0046 Sftpa1 -2.7569 4.7897 0 0.0009 Rem1 -2.7521 1.9231 0 0.0003 Clec4b1 -2.7349 1.1989 0 0.0004 Skint3 -2.734 4.6554 0 0 Prx -2.7337 4.5468 0 0.0004 Emr4 -2.73 6.7307 0 0 Myh14 -2.7224 3.0291 0.0001 0.0019 Ace -2.6815 9.7759 0 0 Cited4 -2.6801 3.3046 0 0.0003 Scnn1a -2.6632 5.4611 0 0 Faim3 -2.6531 2.049 0.0002 0.0035 Spn -2.648 8.2636 0 0 Cxcl15 -2.6344 4.22 0.0003 0.0045 Rnf144a -2.6338 5.441 0 0 Pglyrp1 -2.6266 5.7248 0 0 Aff3 -2.6261 3.3703 0.0002 0.0034 Cers4 -2.6125 2.8405 0.0005 0.0077 Rasgrf2 -2.6106 3.2165 0 0 Prelp -2.605 6.4873 0 0 Eltd1 -2.6022 4.5243 0.0003 0.0057 Tmem204 -2.6006 4.0515 0.0002 0.0037 Postn -2.5944 3.6 0.0003 0.0052 Ccm2l -2.5867 2.8201 0.0025 0.03 Ppp1r16b -2.5767 4.9033 0.0001 0.0014 Foxf1 -2.5701 4.3097 0.0001 0.002 Tbc1d8 -2.5672 6.5356 0 0 Gimap4 -2.5454 4.2116 0.0004 0.0066 Nrarp -2.5424 4.3359 0 0 Ptprb -2.5103 7.1286 0 0.0002 Ldlrad3 -2.5044 7.6523 0 0