TIBCO® Enterprise Runtime for Open-Source Compatibility Software Release 3.1 February 2015

Two-Second Advantage® 2

Important Information

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TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 3

Contents

TIBCO Enterprise Runtime for R Documentation and Support Services ...... 5 Summary of Package Tests ...... 6 R Packages Successfully Run in TIBCO Enterprise Runtime for R ...... 8 A / Compatible with TERR ...... 8 B / Compatible with TERR ...... 11 C / Compatible with TERR ...... 15 D / Compatible with TERR ...... 22 E / Compatible with TERR ...... 26 F / Compatible with TERR ...... 29 G / Compatible with TERR ...... 33 H / Compatible with TERR ...... 38 I - J / Compatible with TERR ...... 40 K - L / Compatible with TERR ...... 43 M / Compatible with TERR ...... 48 N - O / Compatible with TERR ...... 55 P - Q / Compatible with TERR ...... 59 R / Compatible with TERR ...... 61 S / Compatible with TERR ...... 66 T - U / Compatible with TERR ...... 76 V - Z / Compatible with TERR ...... 80 TIBCO Enterprise Runtime for R Package Compatibility ...... 83 A / Package Compatibility Details ...... 83 B / Package Compatibility Details ...... 84 C / Package Compatibility Details ...... 97 D / Package Compatibility Details ...... 115 E / Package Compatibility Details ...... 127 F / Package Compatibility Details ...... 137 G / Package Compatibility Details ...... 148 H / Package Compatibility Details ...... 162 I / Package Compatibility Details ...... 169 J / Package Compatibility Details ...... 177 K / Package Compatibility Details ...... 178 L / Package Compatibility Details ...... 181 M / Package Compatibility Details ...... 191 N / Package Compatibility Details ...... 212 O / Package Compatibility Details ...... 219 P / Package Compatibility Details ...... 224 Q / Package Compatibility Details ...... 243

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 4

R / Package Compatibility Details ...... 246 S / Package Compatibility Details ...... 274 T / Package Compatibility Details ...... 303 U / Package Compatibility Details ...... 314 V / Package Compatibility Details ...... 315 W / Package Compatibility Details ...... 318 X / Package Compatibility Details ...... 322 Y / Package Compatibility Details ...... 323 Z / Package Compatibility Details ...... 323

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 5

TIBCO Enterprise Runtime for R Documentation and Support Services

All TIBCO documentation is available on the TIBCO Documentation site, which can be found here: https://docs.tibco.com

TIBCO Enterprise Runtime for R Documentation

The following documents for this product can be found in the TIBCO Documentation Library:

● TIBCO® Enterprise Runtime for R Release Notes ● TIBCO® Enterprise Runtime for R Technical Guide ● TIBCO® Enterprise Runtime for R Java with terrJava ● TIBCO® Enterprise Runtime for R Language Reference ● Differences Between TIBCO® Enterprise Runtime for R and Open-Source R ● TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility ● TIBCO® Enterprise Runtime for R Available Functions by Category and Subcategory ● TIBCO® Enterprise Runtime for R Unavailable Function Lists ● Distributing TIBCO® Enterprise Runtime for R using Apache Hadoop™ ● TIBCO® Enterprise Runtime for R for RStudio (Readme text) ● Using TIBCO® Enterprise Runtime for R with KNIME (Readme text) ● TIBCO® Enterprise Runtime for R License Agreement

Product System Requirements

For a list of system requirements for this product and other TIBCO Spotfire® products, visit this site: http://support.spotfire.com/sr.asp

How to Contact TIBCO Support

For comments or problems with this manual or the software it addresses, contact TIBCO Support as follows:

● For an overview of TIBCO Support, and information about getting started with TIBCO Support, visit this site: http://www.tibco.com/services/support

● If you already have a valid maintenance or support contract, visit this site: https://support.tibco.com Entry to this site requires a user name and password. If you do not have a user name, you can request one.

How to Join TIBCOmmunity

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TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 6

Summary of Package Tests

This summary provides an overview of the numbers of packages from the Comprehensive R Archive Network (CRAN) from January 30, 2015 that were run in version 3.1 of the TIBCO Enterprise Runtime for R (TERR) engine and the results of those tests.

Checking Package Compatibility Programmatically You can use TERR itself to check for package compatibility. Use the following example code to download the CSV of the list of CRAN packages tested with this release, and then call the match function on the particular package of interest. From the TERR console, run the following: # tests compatibility with TERR 3.1 packageCompat <- read.csv("https://goo.gl/NIiE1l", stringsAsFactors=FALSE) packageCompat[match("survival", packageCompat$Package),] ## Package TERR_result Matches_R package_version ## 5506 survival success NO 2.37-7

Replace the package name "survival" with the name of the package you are interested in. This release of the package tests reports successes and failures, as well as whether the results from testing against TERR match those of testing in open-source R. In this report, we do not indicate the number of successfully-run tests; if any example tests fail in TERR, then the package compatibility is listed as a failure.

Matches R:

Results of N/A or Package Tests Maybe No Yes Total Results Definition

success 127 579 1146 1852 The package successfully installed and loaded. All test and example function code ran to completion without errors. In 588 cases, the results did not match the results produced by running the example code in open-source R. In 1041 cases, the example code code ran successfully and matched the results in open-source R.

failure 1684 1684 The package successfully installed and loaded; however, there were failures in the test and/or example function code.

noExamples 196 196 The packages successfully installed and loaded, however the package contained no test or example code.

cantLoad 1401 1401 The package did not load successfully.

fatalError 10 10 An error occurred while running the test and/or the example function code.

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 7

Matches R:

Results of N/A or Package Tests Maybe No Yes Total Results Definition noData 704 704 The packages successfully installed and loaded; however, the package contained no test or example code. timedOut 296 296 The package successfully installed and loaded; however, the test and/or the example function code run timed out.

Grand Total 4418 579 1146 6143

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 8

R Packages Successfully Run in TIBCO Enterprise Runtime for R

The following CRAN packages (available January 30, 2015) loaded successfully in TERR version 3.1. All example code in the packages' reference topics and vignettes ran without error in the TERR 3.1 engine.

A B C D E F

G H I - J K - L M N - O

P - Q R S T - U V - Z

A / Compatible with TERR The following CRAN packages starting with the letter A ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

ABCoptim YES 0.13.11

ABCp2 YES 1.1

abctools YES 1

abundant YES 1

acnr NO 0.2.4

acopula YES 0.9.2

activity NO 1

ada YES 2.0-3

adagio YES 0.5.9

adaptDA MAYBE 1

AdaptiveSparsity NO 1.4

additivityTests YES 1.1-4

ADDT YES 1

adlift NO 1.3-2

ADM3 YES 1.3

adwave YES 1

AGD MAYBE 0.32

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 9

Package Name Matches R Version

Agreement NO 0.8-1 agrmt YES 1.39 ahaz NO 1.14

AID YES 1.4 aidar YES 1.0.0 akmeans YES 1.1 alabama YES 2014.12-1 ald YES 1

ALDqr YES 0.5

ALKr NO 0.5.3.1 allan NO 1.01

AlleleRetain YES 1.3.1 allelic YES 0.1

AllPossibleSpellings YES 1.1 alr4 NO 1.0.5

ALS YES 0.0.5

ALSCPC YES 1

AMAP.Seq YES 1 amen NO 0.999

AmericanCallOpt YES 0.95 aml NO 0.1-1

AMORE YES 0.2-15

AnDE MAYBE 1 anfis NO 0.99.1

AnglerCreelSurveySimulation YES 0.2.1 anominate NO 0.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 10

Package Name Matches R Version apcluster MAYBE 1.4.1 apple YES 0.3 aprean3 YES 1 apsrtable NO 0.8-8

AR1seg YES 1 archdata NO 0.1

ArDec NO 2 arf3DS4 YES 2.5-10 argosfilter YES 0.63 argparser YES 0.1 arnie YES 0.1.2

ArrayBin YES 0.2 ascii YES 2.1 ash NO 1.0-14

ASPBay NO 1.2 aspect NO 1.0-3

AssetPricing NO 1.0-0

AssotesteR YES 0.1-10 astroFns NO 4.1-0 asympTest YES 0.1.3 asypow YES 2013.9-1 atmcmc YES 1

AUC YES 0.3.0

AUCRF YES 1.1 audiolyzR YES 0.4-9 autoencoder NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 11

Package Name Matches R Version

autopls NO 1.2-7

AutoSEARCH YES 1.4

awsMethods YES 1.0-3

B / Compatible with TERR The following CRAN packages starting with the letter B ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

b6e6rl YES 1.1

babel YES 0.2-6

bagRboostR YES 0.0.2

BalancedSampling YES 1.4

bams YES 1.6

barcode YES 1.1

basicspace NO 0.15

batade YES 0.1

batch YES 1.1-4

BayClone2 YES 1.1

bayesclust YES 3.1

BayesDA NO 2012.04-1

bayesMCClust MAYBE 1

bayespref YES 1

bayesSurv YES 2.3-1

BayesValidate YES 0

BayesVarSel NO 1.5.1

BayHap YES 1.0.1

BaySIC YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 12

Package Name Matches R Version bbefkr YES 4.2 bbemkr YES 2

BBMM YES 3 bbo YES 0.2

BCBCSF YES 1.0-0 bcpmeta NO 1 bdoc YES 1.2 bdpv NO 1.1

BEANSP YES 1 benchden YES 1.0.5

Benchmarking MAYBE 0.24

BenfordTests YES 1.1.1 betafam YES 1 betaper YES 1.1-0 betategarch YES 3.2 bethel NO 0.2 bglm NO 1

BGLR NO 1.0.3 bgmm NO 1.7

BGPhazard YES 1.1

Bhat YES 0.9-10

BHMSMAfMRI YES 1

BiDimRegression NO 1.0.6 biglm NO 0.9-1 bild NO 1.1-3 bimetallic YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 13

Package Name Matches R Version binda YES 1.0.1 binequality MAYBE 0.6.1 binGroup NO 1.1-0 binMto YES 0.0-6

BinNor YES 2 binomialcftp YES 1 binomlogit MAYBE 1.2 binomSamSize NO 0.1-3 bio.infer NO 1.3-3

Biodem YES 0.3 biom NO 0.3.12

BioMark NO 0.4.2 bionetdata YES 1.0.1 biopara YES 1.5

BioPhysConnectoR NO 1.6-10

BioStatR MAYBE 2.0.0 biplotbootGUI NO 1

BIPOD YES 0.2.1 birk YES 1.2 bivarRIpower YES 1.2 bizdays YES 0.1.5

BlakerCI YES 1.0-4 blender NO 0.1.2 blighty NO 3.1-4 blockmatrix YES 1

BlockMessage YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 14

Package Name Matches R Version blockmodeling NO 0.1.8 blockrand YES 1.3 blocksdesign YES 1.4

BMhyd YES 1.2-2 bmk YES 1

BMN YES 1.02 bmp YES 0.2 bmrm YES 3

BMS NO 0.3.3 bnormnlr YES 1 bnpmr MAYBE 1.1

BNSP YES 1.0.2

BOIN YES 1

Boom NO 0.2 boostSeq NO 1 bootRes NO 1.2.3 bootruin YES 1.2-1 bootspecdens YES 3 bootSVD NO 0.1

Boruta YES 4.0.0

BoSSA YES 1.2 boussinesq YES 1.0.3 bPeaks YES 1.2 bqtl NO 1.0-30 breakage YES 1.1-1 breakaway NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 15

Package Name Matches R Version

brew NO 1.0-6

bride MAYBE 1.3

Brobdingnag MAYBE 1.2-4

bshazard YES 1

BsMD NO 2013.0718

BSquare YES 1.1

bst YES 0.3-4

BurStFin NO 1.02

BurStMisc YES 1

bursts YES 1.0-1

bvenn YES 0.1

C / Compatible with TERR The following CRAN packages starting with the letter C ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

C50 NO 0.1.0-21

ca NO 0.58

cacIRT YES 1.3

CaDENCE NO 1.2.1

calibrate NO 1.7.2

CAMAN NO 0.72

capushe NO 1

CARBayesST YES 1.1

care NO 1.1.7

CARE1 YES 1.1.0

caribou YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 16

Package Name Matches R Version caseMatch NO 1.0.1

CateSelection YES 1 catIrt YES 0.5-0 causalsens NO 0.1 ccChooser NO 0.2.6 cchs YES 0.1.0 cclust YES 0.6-19

CCM YES 1.1

CCP YES 1.1

CCpop NO 1

CDFt YES 1.0.1

CDLasso YES 1.1

CDNmoney NO 2012.4-1 cec2005benchmark YES 1.0.3 cec2013 YES 0.1-5

CEGO MAYBE 1.0.1108

CellularAutomaton YES 1.1-1 cfa NO 0.9-3

CfEstimateQuantiles YES 1 cgam NO 1.2 cgAUC YES 1.2.1 cgdsr YES 1.1.33 cghseg NO 1.0.2

CGP YES 2.0-2

ChargeTransport NO 1.0.2 cheb YES 0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 17

Package Name Matches R Version chebpol MAYBE 1.3-1367

CheckDigit YES 0.1-1 chemCal NO 0.1-34

ChemometricsWithRData YES 0.1.3 childsds NO 0.5 choiceDes YES 0.9-1

ChoiceModelR YES 1.2 choplump NO 1.0-0.4 choroplethrMaps YES 1

CIFsmry YES 1.0.1 cin YES 0.1

CircE NO 1.1

CircStats YES 0.2-4

Ckmeans.1d.dp YES 3.02 cladoRcpp MAYBE 0.14.4 clere NO 1.1

ClimClass NO 1 clime YES 0.4.1 clinUtiDNA YES 1 clogitL1 YES 1.4 clpAPI MAYBE 1.2.6

CLSOCP YES 1 clue NO 0.3-48 cluster.datasets YES 1.0-1 clusterCrit YES 1.2.4 clustergas YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 18

Package Name Matches R Version clusterGeneration YES 1.3.1 clusterPower YES 0.5 clusterRepro YES 0.5-1.1 clusthaplo YES 1.2

ClustOfVar NO 0.8

ClustVarLV NO 1.3.1 cmaes YES 1.0-11

CMC YES 1

CMF YES 1

CMPControl YES 1 cmprskQR YES 0.9.0 cmvnorm YES 1

COBRA YES 0.99.4 cocron NO 1.0-0 coda YES 0.16-1 codadiags YES 1 codep NO 0.4-1 coefficientalpha YES 0.3.3 coefplot NO 1.2.0 coexist YES 1

CoinMinD YES 1.1 colorfulVennPlot YES 2.4 colorRamps NO 2.3 colourlovers MAYBE 0.1.4 combinat YES 0.0-8

CombinePValue YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 19

Package Name Matches R Version

CombinS NO 1

CommonJavaJars YES 1.0-5

CommunityCorrelogram YES 1

Comp2ROC YES 1 compactr YES 0.1 compareC NO 1.3.1 comparison MAYBE 1.0-4 compHclust NO 1.0-2 compLasso MAYBE 0.0-1

CompLognormal YES 3 compoisson YES 0.3 compute.es YES 0.2-4 concor YES 1.0-0.1 concreg NO 0.5 cond NO 1.2-3 coneproj NO 1.5 conf.design YES 2.0.0 conics NO 0.3 contfrac YES 1.1-9 contrast NO 0.19

ConvCalendar YES 1.2 cooccur MAYBE 1.2 corcounts YES 1.4

CORE YES 3 coreTDT YES 1

CORM YES 1.0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 20

Package Name Matches R Version corpora NO 0.4-3

Correlplot NO 1.0-2 corrgram NO 1.6 corrsieve NO 1.6-8 corTools YES 1

COSINE YES 2.1 cosmosR YES 1 cosso MAYBE 2.1-1 costat YES 2.3 cotrend YES 1 countrycode YES 0.18 covLCA YES 1 covreg YES 1 covRobust YES 1.1-0

CovSel MAYBE 1.1 covTest MAYBE 1.02

CoxBoost MAYBE 1.4 coxphf YES 1.11

CoxRidge NO 0.9.1 cpa YES 1 cpca NO 0.1.2

CPHshape YES 1.0.1 cpk YES 1.3-1

CPMCGLM YES 1.1 cquad YES 1

CR YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 21

Package Name Matches R Version crackR YES 0.3-9 cramer YES 0.9-1 crank YES 1.0-7

CreditMetrics YES 0.0-2 crimCV YES 0.9.3 crn YES 1.1 crossdes YES 1.1-1 crossReg YES 1 crossval YES 1.0.2 crp.CSFP NO 2 crqa NO 1.0.5 crrSC YES 1.1

CRTSize YES 0.3 csampling YES 1.2-2 cSFM NO 1.1 cshapes MAYBE 0.4-2 cslogistic MAYBE 0.1-3 csn YES 1.1.1

CSS NO 1.0.2

CTT NO 2.1 ctv NO 0.8-1 cudia YES 0.1 cumplyr YES 0.1-1 currentSurvival YES 1 cutoffR MAYBE 1

CVcalibration YES 1.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 22

Package Name Matches R Version

cvplogistic YES 3.1-0

CVThresh NO 1.1.1

CVTuningCov YES 1

cxxfunplus YES 1

cycloids YES 1

cyphid YES 1.1

cytoDiv MAYBE 0.5-3

D / Compatible with TERR The following CRAN packages starting with the letter D ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

d3Network YES 0.5.1

DAAGxtras NO 0.8-4

dagbag NO 1.1

DAGGER YES 1.4

dagR NO 1.1.3

darts NO 1

dashboard YES 0.1.0

dataframes2xls NO 0.4.6

datamerge YES 1.0-1

dataQualityR NO 1

datautils YES 0.1.4

Davies NO 1.1-8

dawai YES 1.1

db.r NO 0.1.3

dbEmpLikeGOF YES 1.2.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 23

Package Name Matches R Version dbEmpLikeNorm YES 1.0.0

DBFTest YES 1

DBGSA YES 1.2 dblcens YES 1.1.7 dcv YES 0.1.1

DDD YES 2.6 ddst YES 1.03 deamer NO 1

DECIDE YES 1.2 deepnet YES 0.2 degenes YES 1.1 deltaPlotR YES 1.5

DEMEtics YES 0.8-7 demi YES 1.1.1 deming NO 1.0-1 demoKde NO 0.9-3 denpro NO 0.9.1 densityClust NO 0.1-1

DEoptimR YES 1.0-2 depthTools NO 0.4 descomponer NO 1.1 descr YES 1.0.4

DESnowball YES 1 detrendeR YES 1.0.4 df2json YES 0.0.2 dfcomb YES 2.0-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 24

Package Name Matches R Version dfexplore NO 0.2.1 dfmta YES 1.1-2 dfoptim YES 2011.8-1 dglars NO 1.0.5 diagram NO 1.6.3 dice YES 1.2 dicionariosIBGE NO 1.6 diffdepprop YES 0.1-9 diffIRT YES 1.4 diffractometry YES 0.1-8 digitalPCR YES 1

Disake YES 1 disclap YES 1.5

DiscreteInverseWeibull NO 1.0.1

DiscreteLaplace YES 1 discreteMTP NO 0.1-2 discreteRV NO 1.1.3 discretization NO 1.0-1 displayHTS NO 1 dissUtils YES 1 distfree.cr YES 1 distillery YES 1.0-1 distory YES 1.4.2

DiversitySampler YES 2.1

DivMelt NO 1.0.3 divo YES 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 25

Package Name Matches R Version dkDNA YES 0.1.0 dmt NO 0.8.20

DNAprofiles YES 0.2

DNAtools YES 0.1-21

DnE NO 2.1.0 docopt YES 0.4.2

Dodge NO 0.8 dotenv YES 1 dpglasso YES 1 dpmixsim NO 0.0-8 drgee YES 1.0.1 drmdel YES 1.3.1 dropR YES 0.1 dsample YES 0.91.1 dst YES 0.3

DTComPair YES 1.0.3

DTMCPack YES 0.1-2

DTR YES 1.5 dtt YES 0.1-2 dummies YES 1.5.6 dummy YES 0.1.0 dunn.test YES 1.2.2 dynamicTreeCut YES 1.62 dynsurv YES 0.2-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 26

E / Compatible with TERR The following CRAN packages starting with the letter E ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

EasyABC YES 1.4

easynls NO 4

ebal YES 0.1-6

EbayesThresh YES 1.3.2

EBEN NO 1.1.1

EBglmnet YES 3.6

EBMAforecast NO 0.42

ebSNP YES 1

ecodist NO 1.2.9

ecoretriever NO 0.1

ecosim NO 1.2

ecoval YES 1

EcoVirtual YES 0.1

ecp MAYBE 1.6.2

edcc YES 1.0-0

EDR NO 0.6-5.1

EffectsRelBaseline YES 0.5

EffectTreat YES 0.1-1

effsize YES 0.5.2

ega NO 1.0.0

eigeninv NO 2011.8-1

eigenmodel NO 1.01

eigenprcomp YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 27

Package Name Matches R Version eive YES 2.1

EL YES 1 elasticnet YES 1.1 elec NO 0.1.2 elec.strat NO 0.1.1 elmNN YES 1

EloRating NO 0.43 elrm YES 1.2.2

EMCluster NO 0.2-4

EMJumpDiffusion YES 1.4.1

EMMAgeo YES 0.9.1

EMMIXcontrasts YES 1.0.0

EMMIXuskew YES 0.11-6

EMMREML YES 2

EMP MAYBE 2.0.1

EMVC YES 0.1 endorse NO 1.4.1 english YES 1.0-1

ENmisc YES 1.2-7 enpls YES 1 enrichvs NO 0.0.5 ensembleBMA NO 5.0.8 ensembleMOS NO 0.7 entropy YES 1.2.1

EntropyEstimation YES 1.2 enviPat NO 1.9

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 28

Package Name Matches R Version

EnvNicheR YES 1 epi2loc YES 1.0-1 epinet MAYBE 2.0.9 episplineDensity YES 0.0-1

Eplot YES 1 epr NO 2 erboost YES 1.2

ES YES 1

ESG NO 0.1 esotericR YES 1

EstSimPDMP YES 1.2

ETLUtils NO 1.2

Evapotranspiration NO 1.5 evdbayes YES 1.1-1 eVenn YES 2.1.6 eventInterval NO 1.2 events NO 0.5 eventstudies NO 1.1 evmix YES 2.4 evolvability YES 1

EvoRAG NO 2

Exact YES 1.4

ExactCIdiff YES 1.3 exactmeta NO 1.0-2

ExactPath NO 1

ExceedanceTools YES 1.2.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 29

Package Name Matches R Version

exCon YES 0.1-3

expoRkit NO 0.9

ExPosition NO 2.8.19

expoTree MAYBE 1.0.1

expsmooth YES 2.02

exptest YES 1.2

extfunnel YES 1.3

extlasso YES 0.2

extraBinomial NO 2.1

ExtremeBounds MAYBE 0.1.4.2

extWeibQuant YES 1.1

eyetracking YES 1.1

ezglm NO 1

F / Compatible with TERR The following CRAN packages starting with the letter F ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

FacPad YES 3

FactMixtAnalysis YES 1

factorplot YES 1.1-1

FAdist YES 2

Fahrmeir NO 2012.04-0

fail YES 1.2

falcon YES 0.1

fame YES 2.18

FAmle NO 1.3.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 30

Package Name Matches R Version faraway NO 1.0.6 farsi YES 1 fast NO 0.63 fastGHQuad YES 0.2 fastICA YES 1.2-0

FastImputation MAYBE 1.2 fastM NO 0.0-2

FastRWeb YES 1.1-0 fastSOM YES 0.9 fat2Lpoly YES 1.1.1

FAwR NO 1.0.1 fbati NO 1.0-1

FBFsearch YES 1

FBN YES 1.5.1 fBonds NO 3010.77 fcd MAYBE 0.1 fCertificates YES 0.5-3 fclust NO 1.0.1 fdakma YES 1.1.1 fdatest YES 2

FDGcopulas NO 1

FDRreg MAYBE 0.1 fdth MAYBE 1.1-8 fechner YES 1.0-2

FFD NO 1.0-2

FField YES 0.1.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 31

Package Name Matches R Version ffmanova NO 0.2-2 fftwtools NO 0.9-6

FGalgorithm MAYBE 1 fgof YES 0.2-1

FGSG YES 1

FHtest NO 1.1

FI YES 1 fICA MAYBE 1.0-2 financial YES 0.2

FinCal YES 0.6

FindAllRoots YES 1

FindMinIC NO 1.6 fingerprint NO 3.5.2 finiteruinprob YES 0.4

FitARMA YES 1.6 fitDRC MAYBE 1.1

FITSio NO 2.0-0 flam MAYBE 1 flashClust YES 1.01-2 flexCWM NO 1.3

FLIM MAYBE 1.2

FLLat MAYBE 1.1

FLR NO 1

FLSSS YES 3.1

FluOMatic NO 1

Flury YES 0.1-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 32

Package Name Matches R Version fmri YES 1.5-1

FNN YES 1.1 foba YES 0.1 forams NO 2.0-4 forensic YES 0.2

FormalSeries YES 1 formula.tools YES 1.3.4 forward NO 1.0.3 fpca NO 0.2-1

FPDclustering YES 1 fpp NO 0.5

FRACTION YES 1 frailtyHL YES 1.1

FRAPO NO 0.3-8

FRCC YES 1 freeknotsplines YES 1 freestats YES 0.0.3

FREQ YES 1 freqparcoord NO 1.0.0

FrF2.catlg128 MAYBE 1.2-1 frt YES 0.1 fsia YES 1 fts YES 0.9.9 fueleconomy YES 0.1

FunChisq YES 1

Funclustering YES 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 33

Package Name Matches R Version

funHDDC NO 1

funreg NO 1.1

funtimes YES 1

futile.any YES 1.3.0

futile.logger NO 1.3.7

futile.matrix NO 1.2.2

futile.options YES 1.0.0

futile.paradigm YES 2.0.4

fuzzyFDR YES 1

fuzzyRankTests NO 0.3-5

FuzzyToolkitUoN YES 1

FWDselect NO 1.1

fwi.fbp NO 1.5

G / Compatible with TERR The following CRAN packages starting with the letter G ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

GA NO 2.2

GA4Stratification YES 1

GABi YES 0.1

gains YES 1.1

GAIPE YES 1

gamair YES 0.0-8

gambin YES 1.1

gamclass MAYBE 0.55

games NO 1.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 34

Package Name Matches R Version gamlr NO 1.12-1 gamlss.add MAYBE 4.3-0 gamlss.data MAYBE 4.2-7 gamlss.demo MAYBE 4.2-7 gamlss.mx MAYBE 4.2-7 gammSlice NO 1.3

GANPAdata YES 1 gaoptim YES 1.1 gaussDiff YES 1.1 gaussquad NO 1.0-2 gb YES 1.1.8-8 gCat YES 0.1 gcdnet NO 1.0.4 gconcord YES 0.41

GCPM YES 1.1.1 gdalUtils YES 0.3.1 geeM NO 0.7.2

GenABEL.data YES 1.0.0 genalg YES 0.1.1.1

GenBinomApps YES 1.0-2 gendata NO 1

GeneF YES 1 geneListPie YES 1 genetics NO 1.3.8.1

GeneticSubsetter NO 0.5

GenKern YES 1.2-60

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 35

Package Name Matches R Version genMOSS NO 1.2

GenOrd NO 1.2.0 gensemble YES 1 genSurv YES 1.0.2

GenWin YES 0.1 geoscale NO 1.1 geosphere MAYBE 1.3-11 geotools YES 0.1 geozoo NO 0.4.3 getopt YES 1.20.0 gets MAYBE 0.2

GEVcdn YES 1.1.3 ggHorizon YES 0.1

GGIR NO 1.1-4 gglasso MAYBE 1.3 ggparallel YES 0.1.1

GhcnDaily YES 1.5 gibbs.met YES 1.1-3

GibbsACOV YES 1.1

GillespieSSA YES 0.5-4 gIPFrm YES 2

Giza NO 1 glasso YES 1.8

GLDEX YES 2.0.0.2 glinternet YES 0.9.0 glmlep YES 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 36

Package Name Matches R Version glmmBUGS NO 2.3 glmpath NO 0.97 glmpathcr NO 1.0.3 globalboosttest NO 1.1-0 globalGSA YES 1 globalOptTests YES 1.1 glrt YES 2

GLSME YES 1.0.2

GMDH YES 1 gmodels NO 2.15.4.1 gmt YES 1.2-0 gnmf YES 0.7 goalprog NO 1.0-2 goft YES 1 goftest YES 1.0-2 gogarch NO 0.7-2 gooJSON YES 1.0.01 goric MAYBE 0.0-8 gPCA NO 1 gPdtest YES 0.4

GPfit YES 0.2-1 gpk NO 1 gpr YES 1.1

GPseq YES 0.5

GPvam YES 3.0-2 grade NO 0.2-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 37

Package Name Matches R Version

GrassmannOptim NO 2 grnn YES 0.1.0 grouped NO 0.6-0 growthmodels YES 1.2.0 growthrate YES 1.3 grppenalty YES 2.1-0 grpreg NO 2.8-0

GRTo YES 1.2

GSA YES 1.03 gsalib YES 2.1 gset YES 1.1.0 gsmoothr YES 0.1.7 gsw YES 1.0-3 gtcorr YES 0.2-1 gte YES 1.2-1 gtx NO 0.0.8

GuardianR YES 0.5 gumbel MAYBE 1.05

GUniFrac YES 1 gwerAM YES 1

GWG YES 1

GWsignif YES 1

GxM YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 38

H / Compatible with TERR The following CRAN packages starting with the letter H ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

haarfisz YES 4.5

Hankel YES 0.0-1

HAP.ROR NO 1

hapassoc NO 1.2-7

hawkes YES 0.0-4

hazus YES 0.1

hcci NO 1.0.0

hcp YES 0.1

hdeco NO 0.4.1

HDPenReg YES 0.9

HDtweedie MAYBE 1.1

HEAT NO 1.2

heatex YES 1

heatmap.plus YES 1.3

hermite YES 1.0.1

het.test YES 0.1

hexView YES 0.3-3

hflights YES 0.1

HGNChelper YES 0.3.1

HI YES 0.4

HiClimR MAYBE 1.1.5

HiCseg NO 1.1

hierNet YES 1.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 39

Package Name Matches R Version highlight YES 0.4.4 highTtest YES 1 hillmakeR YES 0.2

HiLMM YES 1 hint YES 0.1-1 historydata YES 0.1

HIV.LifeTables YES 0.1

HK80 YES 0.0.1

HMM YES 1 hmm.discnp YES 0.2-3

HMMCont NO 1

HMMpa YES 1 hnp NO 1 holdem NO 1.1 homeR YES 0.1 homtest NO 1.0-5

HotDeckImputation YES 1.0.0

Hotelling NO 1.0-2 hotspots YES 1.0.2 howmany NO 0.3-1

HPbayes YES 0.1 hpcwld YES 0.4 hqmisc YES 0.1-1 hrr YES 1.1.1 hsicCCA YES 1

HSSVD YES 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 40

Package Name Matches R Version

humanFormat YES 1

HW.pval YES 1

hwde NO 0.64

HWEintrinsic NO 1.2.1

HWxtest YES 1.0.5

hybridHclust NO 1.0-4

HybridMC YES 0.2

hydroApps YES 0.1-1

hydroPSO YES 0.3-4

hypergea YES 1.2.3

hypred NO 0.5

I - J / Compatible with TERR The following CRAN packages starting with the letters I and J ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

IBDhaploRtools YES 1.7

ibelief YES 1

Iboot YES 0.1-1

ibr YES 1.4.5

iBUGS MAYBE 0.1.4

iC10 NO 1.1.2

iC10TrainingData NO 1.0.1

IC2 YES 1.0-1

ica YES 1.0-0

icamix NO 1.0.1

icapca NO 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 41

Package Name Matches R Version

ICE YES 0.69

ICEinfer NO 1.0-1 icensmis NO 1.2.1

ICGE YES 0.3

ICSNP YES 1.0-9

ICsurv YES 1 idbg YES 1 identity YES 0.2-1 idr NO 1.2

IFP YES 0.1.1

IM MAYBE 1

IMIS YES 0.1 imputeMDR YES 1.1.2 in2extRemes YES 1.0-1 incReg NO 1 ineq YES 0.2-13

InfDim NO 1

InferenceSMR NO 1 inflection YES 1.1 infoDecompuTE YES 0.5.1 infotheo NO 1.2.0

InPosition NO 0.12.7 insuranceData YES 1 intcox NO 0.9.3

Interact YES 1.1 interferenceCI YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 42

Package Name Matches R Version

Interpol YES 1.3.1

InterVA4 NO 1.5 interventionalDBN NO 1.2.2

IntLik YES 1 intpoint YES 1 inTrees YES 1.1 intRegGOF YES 0.85-1 introgress YES 1.2.3

InventorymodelPackage YES 1.0.2 ipdmeta NO 2.4 ipfp YES 1 irace YES 1.06 iRegression YES 1.2 irlba YES 1.0.3 irr YES 0.84 irtrees NO 0.1.0

ISBF YES 0.2.1 isingLenzMC NO 0.2.1

IsingSampler YES 0.1.1

ISLR NO 1

ISOcodes YES 2014.03.24 isopam NO 0.9-13 isopat YES 1

ISOpureR NO 1.0.8 isotone YES 1.0-2 isotonic.pen YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 43

Package Name Matches R Version

isva YES 1.8

ivbma YES 1.05

ivfixed YES 1

ivpack NO 1.2

ivprobit NO 1

jackstraw YES 1

JASPAR MAYBE 0.0.1

JBTools NO 0.7.2.6

jiebaRD YES 0.1

JMdesign NO 1.1

Jmisc YES 0.3.1

Johnson YES 1.4

joineR MAYBE 1.0-3

jointDiag YES 0.2

jointPm YES 2.3.1

jomo YES 0.1-2

JoSAE NO 0.2.2

jtrans YES 0.1

Julia YES 1.1

K - L / Compatible with TERR The following CRAN packages starting with the letters K and L ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

kappaSize YES 1.1

kcirt YES 0.6.0

kelvin MAYBE 1.2-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 44

Package Name Matches R Version kernlab MAYBE 0.9-19

KernSmooth YES 2.23-13 kin.cohort YES 0.6 klausuR NO 0.12-5 klin YES 39118 km.ci YES 0.5-2 kmconfband YES 0.1 kmi NO 0.5.1

KMsurv YES 0.1-5 knnGarden NO 1.0.1 knnIndep NO 2 kofnGA YES 1 kolmim YES 0.2 kpodclustr NO 1

KRLS YES 0.3-7 ktsolve MAYBE 1.1 ktspair NO 1 kza YES 3.0.0 kzft YES 0.17 kzs MAYBE 1.4 label.switching YES 1.3 labeledLoop YES 0.1 labeling YES 0.3 labstatR NO 1.0.7 laercio NO 1.0-1 lambda.tools YES 1.0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 45

Package Name Matches R Version landpred YES 1

LARF YES 1.2 latdiag YES 0.2-1 lazyData NO 1.0.3

LCA MAYBE 0.1 lcda NO 0.3

LCFdata NO 2

LDcorSV YES 1.3.1

LDPD NO 1.0.2

LDRTools NO 0.1

LDtests YES 1 leaderCluster YES 1.2

LeafAngle YES 1.2-1 leafletR MAYBE 0.3-1

LEAPFrOG NO 1.0.7 leaps NO 2.9 learningr YES 0.29 lefse YES 0.1

LeLogicielR NO 1.2 lestat YES 1.8 lgarch YES 0.5

LGS MAYBE 0.91 lgtdl YES 1.1.3 libamtrack MAYBE 0.5.5

LiblineaR NO 1.80-10 limitplot YES 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 46

Package Name Matches R Version

LinCal YES 1

LindenmayeR YES 0.1-0 linkim YES 0.1 linkR YES 1.0.0 linLIR YES 1.1 linprog NO 0.9-2 liso YES 0.2

LIStest YES 2.1 lm.beta NO 1.5-1 lmec YES 1 lmenssp NO 1 lmeSplines NO 1.1-10 lmm YES 0.9 lmmfit NO 1 lmmot YES 0.1.2 lmodel2 YES 1.7-2

Lmoments YES 1.1-6 localdepth YES 0.5-7 logconcens YES 0.16-4 logcondiscr YES 1.0.5 logconPH YES 1.5

LOGICOIL NO 0.99.0 logitchoice YES 0.9.4

LogitNet YES 0.1-1

LogrankA YES 1 logspline YES 2.1.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 47

Package Name Matches R Version lomb NO 1 longCatEDA NO 0.17 longitudinal YES 1.1.10 loop NO 1.1

LoopAnalyst YES 1.2-3 lorec YES 0.6.1

LowRankQP YES 1.0.2 lpc YES 1.0.2

LPmerge YES 1.6 lpSolve YES 5.6.10

LPStimeSeries NO 1.0-4 lrmest YES 1

LS2W YES 1.3-3 lsdv YES 1.1 lshorth YES 0.1-6

LSMonteCarlo YES 1 ltbayes YES 0.3

LTPDvar NO 1.1

LTR YES 1.0.0 luca YES 1.0-5 lucid NO 1 lunar MAYBE 0.1-04

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 48

M / Compatible with TERR The following CRAN packages starting with the letter M ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

m4fe NO 0.1

MADAM NO 1.2.2

mads YES 0.1.1

madsim NO 1.1

MAMSE YES 0.1-3

ManyTests YES 1.1

Map2NCBI NO 1

maptree NO 1.4-7

mAr NO 1.1-2

42064 MAYBE 1

marelac NO 2.1.4

markdown NO 0.7.4

marqLevAlg NO 1.1

MasterBayes NO 2.52

MAT NO 2.2

mathgraph YES 0.9-11

matrixcalc YES 1.0-3

MATTOOLS YES 1.1

MaXact YES 0.2.1

MaxPro YES 3.1-2

MBA YES 0.0-8

MBCluster.Seq YES 1

MBI YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 49

Package Name Matches R Version mcc YES 1 mcclust NO 1

MChtest NO 1.0-2 mcmcse YES 1.0-1

Mcomp YES 2.05

MConjoint NO 0.1

MCPerm YES 1.1.4 mcprofile NO 0.2-1 mded YES 0.1-1

MDPtoolbox NO 4.0.2

MDR NO 1.2 mdsdt YES 1 mederrRank YES 0.0.7 mefa MAYBE 3.2-5 megaptera NO 1.0-0 meifly NO 0.3 mem YES 1.4 memoise NO 0.2.1 merror NO 2.0.1

MetABEL YES 0.2-0 metacor YES 1.0-2 metaLik YES 0.41.0 metap YES 0.6 metatest YES 1.0-4 meteoForecast NO 0.43 meteogRam YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 50

Package Name Matches R Version

MetFns NO 1

Methplot MAYBE 1

MetStaT NO 1 mewAvg NO 0.3.0

MExPosition NO 2.0.3

MF YES 4.3.2 mfblock YES 1 mFilter YES 0.1-3 mfp NO 1.5.0

MfUSampler YES 0.9.1 mgpd YES 1.99

MGSDA YES 1.1 mGSZ YES 1

MHadaptive NO 1.1-8 micEcon NO 0.6-12 migration.indices YES 0.3.0 migui MAYBE 0.00-09

MILC YES 1

MImix YES 1

MindOnStats YES 0.11 minerva YES 1.4.1 minimax YES 1 minque YES 1.1 minxent YES 0.01 mipfp YES 1 miRada YES 1.13.8-8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 51

Package Name Matches R Version missForest YES 1.4 missMDA NO 1.7.3

MissMech NO 1.0.1 mix YES 1.0-8 mixcat NO 1.0-3

MixedTS NO 1.0.1 mixPHM YES 0.7-1 mixRasch NO 1.1 mixreg YES 0.0-5 mixsep MAYBE 0.2.1-2 mixsmsn YES 1.0-9 mixture NO 1.2

MixtureInf YES 1.0-1 mkssd YES 1.1

MLCM NO 0.4.1

MLDS NO 0.4.3 mlegp YES 3.1.4 mlica2 YES 2.1 mlPhaser NO 0.01 mmcm YES 1.2-5 mmds YES 1.1 mmeln YES 1.1 mmeta NO 2.2 mmm NO 1.4

MMMS NO 0.1 mnormpow YES 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 52

Package Name Matches R Version mnormt YES 1.5-1

Mobilize YES 2.16-4

MOCCA YES 1.2 modehunt MAYBE 1.0.6 modeltools MAYBE 0.2-21 modiscloud YES 0.14 modTempEff NO 1.5.2 moduleColor YES 1.08-3

MOJOV NO 1.0.1 moments YES 0.14

MonoPoly NO 0.2-8 mopsocd YES 0.5.1

MOrder YES 0.1 morse NO 1.0.2

MorseGen YES 1.2 mosaicData NO 0.9.1 moult MAYBE 1.4 mountainplot NO 1 mousetrack YES 1.0.0 mp YES 0.2.0 mpa NO 0.7.3

MPCI YES 1.0.6 mpcv YES 1.1 mph YES 0.9

MplusAutomation YES 0.6-3 mpm NO 1.0-22

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 53

Package Name Matches R Version mpmcorrelogram MAYBE 0.1-3 mpmi NO 0.41

Mposterior YES 0.1.2 mreg YES 1.1

MRH YES 2

MRsurv YES 0.2 msda NO 1.0.1 mseapca YES 1 msgpackR YES 1.1 msgps YES 1.3 msr MAYBE 0.4.1

MST YES 1

MTS NO 0.32 mtsdi NO 0.3.3

MTurkR MAYBE 0.6

MultEq YES 2.3 multiband NO 0.1.0

Multiclasstesting NO 1.3.9

MultiCNVDetect YES 0.1-1 multicool YES 0.1-2 multinbmod YES 1

MultinomialCI YES 1 multiPIM YES 1.4-1 multipleNCC YES 1 multisensi NO 1.0-7 multispatialCCM NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 54

Package Name Matches R Version

MultiSV YES 0.0-67

MultNonParam NO 1 muma MAYBE 1.4 munsell MAYBE 0.4.2 muscle YES 3.8.31-4 musicNMR MAYBE 0.0.2 muStat NO 1.7.0

MVar.pt NO 1

MVB YES 1.1 mvcwt YES 1.3 mvglmmRank YES 1.0-2 mvmeta YES 0.4.5 mvna NO 1.2-3 mvnfast YES 0.1.3 mvnormtest YES 0.1-9 mvnpermute YES 1.0.0 mvProbit NO 0.1-0 mvprpb YES 1.0.4 mvrtn YES 1 mvsf YES 1 mvShapiroTest YES 1 mxkssd YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 55

N - O / Compatible with TERR The following CRAN packages starting with the letters N and O ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

NAPPA YES 2

NB MAYBE 0.9

NBDdirichlet NO 1.01

ncbit YES 2013.03.29

nCDunnett YES 1.0.0

ncf YES 1.1-5

ncg YES 0.1.1

ncvreg NO 3.2-0

ndl NO 0.2.16

neariso YES 1

needy YES 0.2

negenes YES 1.0-1

nephro YES 1

NetData YES 0.3

NetIndices YES 1.4.4

NetSim YES 0.9

neural YES 1.4.2.2

neuroim NO 0.0.3

Newdistns YES 1

nFactors NO 2.3.3

ngram NO 1.1

NHANES YES 1

nicheROVER NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 56

Package Name Matches R Version

NISTnls NO 0.9-13

NISTunits YES 1.0.0

NLRoot YES 1 nlsem NO 0.1 nlsMicrobio NO 0.0-1 nlt YES 2.1-3 nmcdr YES 0.3.0 nodeHarvest YES 0.6 noia YES 0.97.1

NominalLogisticBiplot NO 0.2

NormalGamma MAYBE 1.1 normalp NO 0.7.0

NormPsy NO 1.0.2

NORMT3 YES 1.0-3 normtest YES 1.1 nortest YES 1.0-2 noweb YES 1.0-4

NPCD NO 1.0-7

NPMPM YES 1

NPMVCP YES 1.1 nppbib YES 1.0-0

NPS YES 1.1 npst YES 2 nsga2R YES 1 nsgp YES 1.0.5 numOSL NO 1.7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 57

Package Name Matches R Version nutshell NO 2 nutshell.audioscrobbler NO 1 nutshell.bbdb NO 1

OAIHarvester NO 0.1-7 oaxaca MAYBE 0.1 objectSignals NO 0.10.2 obliclus YES 0.9 obliqueRF MAYBE 0.3 obs.agree YES 1 obsSens YES 1.3 ocedata YES 0.1.2 oem MAYBE 1.02.1

Ohmage YES 2.11-4

OIsurv YES 0.2

OjaNP YES 0.9-8

OLScurve YES 0.2.0 onemap NO 2.0-4

ONETr NO 1.0.2

OOmisc YES 1.2

OPDOE YES 1.0-9

OPE NO 0.7

OpenMPController YES 0.1-2 operator.tools YES 1.3.0 ops YES 1 optAUC YES 1 optextras NO 2013-10.28

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 58

Package Name Matches R Version

OptHedging YES 1

OptimalCutpoints YES 1.1-3 optimbase YES 1.0-9 optimsimplex YES 1.0-5 optimx NO 2013.8.7 optiscale YES 1.1 optR NO 1.1.1

ORCI YES 1.1 orclus NO 0.2-5 orcutt NO 1.1 orderedLasso YES 1.7

OrdinalLogisticBiplot YES 0.4

OrdMonReg MAYBE 1.0.3

OrdNor YES 1

OrgMassSpecR NO 0.4-4

ORIClust YES 1.0-1

ORMDR YES 1.3-2 oro.pet YES 0.2.3 orQA YES 0.2.1 orthopolynom YES 1.0-5 osDesign NO 1.7 ouch NO 2.8-4

OutlierDC YES 0.3-0

OutlierDM MAYBE 1.1.1 outliers YES 0.14 overlap YES 0.2.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 59

Package Name Matches R Version

oz YES 1.0-20

P - Q / Compatible with TERR The following CRAN packages starting with the letters P and Q ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

p2distance YES 1.0.1

pacbpred YES 0.92.2

pack YES 0.1-1

packClassic YES 0.5.2

packS4 NO 0.9.1

pairedCI YES 0.5-4

palinsol NO 0.92

pamr NO 1.55

pan NO 0.9

pander NO 0.5.1

panelAR NO 0.1

Paneldata NO 1

ParallelForest NO 1.1.0

parallelMCMCcombine YES 1

ParentOffspring YES 1

PCAmixdata NO 2.2

PCDSpline NO 1

PCGSE YES 0.2

PCS YES 1.2

PearsonICA YES 1.2-4

PEIP NO 1.7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 60

Package Name Matches R Version

PEMM YES 1

PepPrep NO 1.1.0

Peptides NO 1.0.3

PerfMeas YES 1.2.1

PermAlgo MAYBE 1

PerMallows YES 1.7 pGLS NO 0.0-1

PGM2 YES 1

PHeval YES 0.5.2

PhViD YES 1.0.6

PhyActBedRest NO 1

PhysicalActivity YES 0.1-1

PIGShift NO 1.0.0

PIPS YES 1.0.1

PKPDmodels NO 0.3.2

PLIS YES 1.1

PLordprob YES 1

PlotRegionHighlighter YES 1

PoiClaClu YES 1.0.2

PoisNor YES 1

PoissonSeq NO 1.1.2

PolyPatEx NO 0.9

PortRisk YES 1

PottsUtils YES 0.3-2

Power2Stage NO 0.2-2

PPtree YES 2.3.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 61

Package Name Matches R Version

PracTools NO 0.0-2

PredictiveRegression YES 0.1-4

PrivateLR YES 1.2-21

probFDA YES 1

ProgGUIinR YES 0.0-4

PropCIs YES 0.2-5

protoclust YES 1.4

PROTOLIDAR YES 0.1

PRROC YES 1

pRSR YES 3.0.2

PsumtSim NO 0.4

PVR NO 0.2.1

PwrGSD NO 2

QCGWAS NO 1.0-8

QSARdata YES 1.3

Quandl YES 2.4.0

quantification YES 0.1.0

QUIC YES 1.1

R / Compatible with TERR The following CRAN packages starting with the letter R ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

R.methodsS3 MAYBE 1.6.1

R4CDISC NO 0.3

RadTran YES 1

RAdwords YES 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 62

Package Name Matches R Version

Rambo YES 1.1

Rankcluster YES 0.92.9

RankResponse YES 3.1.1

RapidPolygonLookup NO 0.1

RaschSampler YES 0.8-7

RAtmosphere YES 1.1

RCEIM YES 0.2

RConics YES 1

RcppZiggurat MAYBE 0.1.2

RCryptsy NO 0.2

Rcsdp NO 0.1.53

RDIDQ NO 1

Rdistance NO 1.1

Rdsdp MAYBE 1.0.2

ReacTran NO 1.4.2

RealVAMS NO 0.3-1 rebus YES 0.0-4

Records YES 1

RefFreeEWAS NO 1.3

Reliability NO 0.0-2 remMap NO 0.2-0

RepeatedHighDim YES 2.0.0

ResistorArray NO 1.0-28

RGCCA NO 2

RGenetics NO 0.1

Rglpk YES 0.6-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 63

Package Name Matches R Version

RHT YES 1

RidgeFusion YES 1.0-3

RIFS YES 0.1-5

RISmed NO 2.1.2

Ritc YES 1.0.1

Rivivc NO 0.9 rje NO 1.9 rjson NO 0.2.15 rkt YES 1.3 rlecuyer YES 0.3-3 rLTP YES 0.1

RM2 YES 0 rmaf YES 2

RMallow YES 1

RmixmodCombi YES 1

RMKdiscrete YES 0.1 rmp YES 1 rms.gof YES 1

RnavGraphImageData YES 0.0.3 rnbn YES 1.0.3 rneos YES 0.2-8 rngWELL YES 0.10-3 rnrfa MAYBE 0.1.5

RobRSVD YES 1 robustDA YES 1.1 robustgam NO 0.1.7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 64

Package Name Matches R Version

RobustRankAggreg YES 1.1 robustreg YES 0.1-7 rocc NO 1.2 rococo YES 1.1.2

ROCwoGS YES 1 rodd MAYBE 0.1-1

Rook MAYBE 1.1-1

RootsExtremaInflections YES 1 ropensecretsapi YES 1.0.1 rorutadis YES 0.1.3

ROSE NO 0.0-3 roughrf MAYBE 1

RoughSetKnowledgeReduction NO 0.1 rowr MAYBE 1.1.1 rpart.utils YES 0.5 rpartitions NO 0.1 rpartScore YES 1.0-1

RPCLR YES 1

Rphylip MAYBE 0.1-23 rplotengine YES 1.0-5

RPMM YES 1.2 rportfolios YES 1

RPostgreSQL YES 0.4

RPushbullet YES 0.1.1 rqPen YES 1

Rramas YES 0.1-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 65

Package Name Matches R Version rrBLUP YES 4.3 rrBlupMethod6 YES 1.3

Rrdrand YES 0.1-10

RRreg YES 0.2.0 rrules YES 0.1-0

RSADBE YES 1 rsdepth YES 0.1-5 rsgcc MAYBE 1.0.6

RSGHB YES 1.0.2

RSKC NO 2.4.1

Rsolnp YES 1.15

Rsomoclu YES 1.4.1 rsprng NO 1

RStorm NO 0.902 rstudioapi YES 0.2

Rsundials YES 1.6

RSurveillance NO 0.1.0

Rsymphony YES 0.1-18 rtape YES 2.2

RTConnect NO 0.1.4

RTextureMetrics YES 1.1 rtkpp MAYBE 0.8.4

RTriangle YES 1.6-0.6

Rtsne YES 0.9

Rttf2pt1 YES 1.3.3

RUnit NO 0.4.28

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 66

Package Name Matches R Version

Runiversal YES 1.0.2

ruv YES 0.9.4

Rvcg NO 0.10.1

RVideoPoker YES 0.3

RVtests YES 1.2

RWebLogo YES 1.0.3

RWiener YES 1.2-0

Rwinsteps MAYBE 1.0-1

rworldxtra YES 1.01

rwt YES 1.0.0

RXKCD YES 1.7-5

RXshrink YES 1.0-8

RYoudaoTranslate YES 1

ryouready NO 0.3

S / Compatible with TERR The following CRAN packages starting with the letter S ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

s4vd NO 1

sac NO 1.0.1

saccades NO 0.1

sae NO 1.0-2

sae2 NO 0.1-1

saery YES 1

SAFD YES 0.4

safeBinaryRegression YES 0.1-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 67

Package Name Matches R Version

SAM MAYBE 1.0.5

Sample.Size YES 1 samplesize4surveys NO 2.1.0

SampleSizeMeans NO 1.1

SampleSizeProportions YES 1 samplingEstimates NO 0.1-3 samplingVarEst YES 0.9-9 sanitizers YES 0.1.0 sanon NO 1.4

SAPP NO 1.0.4 sas7bdat YES 0.5

SASPECT YES 0.1-1 sBF YES 1.1.1 sbgcop NO 0.975 sbioPN YES 1.1.0

SBSA YES 0.2.3 scalreg YES 1 scape YES 2.2-0

SCBmeanfd NO 1.1 schoolmath YES 0.4 schoRsch NO 1.1 scio YES 0.6.1 sciplot NO 1.1-0

SCMA YES 1.1.1

ScoreGGUM YES 1

SCORER2 YES 0.99.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 68

Package Name Matches R Version

ScrabbleScore YES 1

SCRT YES 1.1.1 scrypt YES 0.1.0 scuba NO 1.7-0

SCVA YES 1.1.1 sddpack YES 0.9 sde NO 2.0.13 sdef NO 1.5

SDMTools NO 1.1-221 sdnet MAYBE 2.03.3 sdtoolkit NO 2.33-1 sdwd NO 1.0.1

SE.IGE YES 1 seacarb NO 3.0.5 sealasso YES 0.1-2

SearchTrees NO 0.5.2

SEAsic YES 0.1

SECP NO 0.1-4 seem YES 1

SEER2R YES 1

SEERaBomb YES 2014.4.1

Segmentor3IsBack NO 1.8 selectiongain YES 2.0.40

SelvarMix YES 1 semGOF YES 0.2-0

SemiCompRisks YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 69

Package Name Matches R Version

SemiMarkov NO 1.4 semisupKernelPCA MAYBE 0.1.5

SEMModComp YES 1 sendmailR YES 1.2-1

SensitivityCaseControl YES 2.1 sensitivitymv YES 1.2 sensitivitymw YES 1.1

SenSrivastava NO 2012-04-0 seqDesign NO 1.0.2 seqmon YES 0.2 seqRFLP YES 1.0.1

Sequential YES 1.1 session NO 1.0.3 severity YES 2 sExtinct YES 1.1 sgeostat NO 1.0-25

SGL YES 1.1 sglasso YES 1.1-0 shape NO 1.4.2

SHIP YES 1.0.2

ShrinkCovMat YES 1.1.0 shuffle MAYBE 1 sigclust YES 1.1.0

SightabilityModel NO 1.3 sigloc NO 0.0.4 simboot YES 0.2-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 70

Package Name Matches R Version simexaft NO 1.0.7 simpleboot NO 1.1-3

SimultAnR NO 1.1

SIN YES 0.6 sirad YES 2.0-7 sisVIVE YES 1 sitools YES 1.4 sjdbc MAYBE 1.5.0-71 skewt YES 0.1

Skillings.Mack MAYBE 1.0-2 sla NO 0.1

SLC YES 0.3 slfm YES 0.1

SLHD YES 1.2-1 slp YES 1.0-3 smac NO 1 smam YES 0.2-2 smco YES 0.1

SMCP YES 1.1.3

SMCRM YES 0.0-3 smcure NO 2 smdata YES 1.1 smirnov YES 1.0-1

SmithWilsonYieldCurve YES 1.0.1

SmoothHazard MAYBE 1.2.3 smoothHR YES 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 71

Package Name Matches R Version smoothie YES 1.0-1 smoothSurv NO 1.3-2

SMR YES 2.0.1 smss NO 1.0-1

SMVar NO 1.3.3 snht MAYBE 1.0.1 snpar YES 1

SNPMClust NO 1 snpRF YES 0.4 sns YES 0.9.1 soc.ca NO 0.7.1

SocialPosition YES 1

SODC YES 1

SoftClustering NO 0.14.02 softImpute NO 1 soilDB YES 1.3-2 soilwater YES 1.0.1 soma YES 1.1.1 somebm YES 0.1 someKfwer YES 1.2 somplot YES 1.6.4 soobench YES 1.0-73

SOR MAYBE 0.22

SortableHTMLTables YES 0.1-3 sp23design YES 0.9 spa YES 2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 72

Package Name Matches R Version

SPA3G YES 1 spaa YES 0.2.1

SPACECAP NO 1.1.0

SPAr NO 0.1 sparc YES 0.9.0 spareserver YES 1.0.0 sparktex NO 0.1 sparseBC NO 1

SparseGrid NO 0.8.2 sparseLDA MAYBE 0.1-6 sparseMVN YES 0.1.0 sparseSEM YES 2.5 spartan YES 2.1 spatcounts YES 1.1 spate NO 1.4 spatgraphs MAYBE 2.62 spatial YES 7.3-8 spatialkernel YES 0.4-19 spatialnbda YES 1

SpatialNP YES 1.1-1 spcadjust NO 0.1-3 spcov YES 1.01 spcr YES 1.2.1 spd YES 2.0-0 spe YES 1.1.2 speccalt NO 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 73

Package Name Matches R Version

SPECIES YES 1 specificity YES 0.1.1

SpecsVerification YES 0.3-0 speedglm NO 0.2-1.0 speff2trial YES 1.0.4 spgrass6 YES 0.8-6

SphericalK YES 1 spi NO 1.1

SPIAssay NO 1.0.0 spikeslab YES 1.1.5

SPIn YES 1.1 spls NO 2.2-1

SPmlficmcm YES 1.3

SPMS YES 2

SPODT NO 0.9-1 sporm YES 1.1 sprinter NO 1.1.0 sprsmdl YES 0.1-0

SPSL YES 0.1-8 spt YES 1.13-8-8 spuRs NO 2.0.0

SQDA YES 1 sqldf NO 0.4-10

SQN YES 1.0.5 srd YES 1 ssfit YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 74

Package Name Matches R Version sspline YES 0.1-6

SSsimple YES 0.6.4 ssvd YES 1 stab YES 0.1.9

StableEstim NO 2 stacomirtools NO 0.3

Stat2Data YES 1.6 statcheck YES 1.0.0

StatDataML YES 1.0-25 statfi NO 0.9.8

Statomica NO 1 stepPlr YES 0.92 stepwise NO 0.3 stinepack YES 1.3 stockPortfolio YES 1.2

Storm YES 1.2

STPGA YES 1 strap NO 1.4 stratification NO 2.2-5 stratigraph NO 0.66 straweib NO 1 stremo NO 0.2

StressStrength YES 1.0.1

SubLasso YES 1 sudoku YES 2.6 sudokuAlt YES 0.1-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 75

Package Name Matches R Version

SUE NO 1

Sunder YES 0.0.4

SunterSampling YES 1.0.1 superbiclust MAYBE 1.1

SuperLearner NO 2.0-15 superMDS YES 1.0.2 superpc MAYBE 1.09

SuppDists NO 1.1-9.1 support.BWS YES 0.1-2 survAccuracyMeasures YES 1.2 survAUC YES 1.0-5 survC1 YES 1.0-2

Survgini YES 1 survival NO 2.37-7 survIDINRI YES 1.1-1 survivalMPL YES 0.1.1 survivalROC YES 1.0.3 survrec YES 1.2-2

SurvRegCensCov YES 1.3 survsim MAYBE 1.1.2 svcm YES 0.1.2 svDialogs YES 0.9-57 svdvisual YES 1.1 svGUI YES 0.9-55 svgViewR NO 1.0.0 svmpath YES 0.953

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 76

Package Name Matches R Version

svSocket NO 0.9-57

svUnit NO 0.7-12

SWATmodel YES 0.5.9

sybilccFBA YES 1.0.0

sybilDynFBA YES 0.0.2

synchrony NO 0.2.3

Synth NO 1.1-5

T - U / Compatible with TERR The following CRAN packages starting with the letters T and U ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

tab NO 2.1.3

TableMonster YES 1.1

TableToLongForm NO 1.3.1

tabuSearch YES 1.1

TaoTeProgramming YES 1

TapeR NO 0.3.2

tawny.types YES 1.1.3

Taxonstand YES 1.7

tbdiag YES 0.1

TBEST NO 5

tclust NO 1.2-3

TDboost YES 1

TDD YES 0.4

TeachNet YES 0.7

TEEReg NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 77

Package Name Matches R Version tensor YES 1.5

TEQR YES 5.0-0

TERAplusB NO 1 tester NO 0.1.7

TestSurvRec NO 1.2.1 testthatsomemore MAYBE 0.1 texmex NO 2.1

TExPosition NO 2.6.10 textometry YES 0.1.4 tfer YES 1.1

TFMPvalue MAYBE 0.0.5 tframe NO 2012.8-1

TFX YES 0.1.0 tgram YES 0.2-2 thermocouple YES 1.0.0 thgenetics YES 0.3-4 threeboost NO 1.1

ThreeWay NO 1.1.2

TiddlyWikiR MAYBE 1.0.1

Tides NO 1 tightClust NO 1

TilePlot YES 1.3.1 timeseriesdb YES 0.1 timma YES 1.2.0 timsac NO 1.3.3

Tinflex MAYBE 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 78

Package Name Matches R Version

TInPosition NO 0.13.6 tipom YES 1.0.2-1 tkrgl YES 0.7 tlemix YES 0.1.3 tlnise YES 2 topmodel MAYBE 0.7.2-2 topsis YES 1 tosls YES 1 tourr NO 0.5.3 tractor.base NO 2.5.0 translateR YES 1 transport YES 0.6-3

TRD YES 1 treecm YES 1.2.1 triangle YES 0.8 trifield NO 1.1 trimcluster NO 0.1-2 trimTrees YES 1.2 tripack MAYBE 1.3-6 tripEstimation YES 0.0-41 trotter NO 0.6 trueskill MAYBE 0.1 truncreg NO 0.2-1 tsc YES 1.0-3

TSEN YES 1

TSHRC YES 0.1-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 79

Package Name Matches R Version

TSjson YES 2014.4-1 tslars YES 1 tsModel YES 0.6

Tsphere YES 1

TSsql NO 2014.4-1 ttutils YES 1.0-1 tumblR YES 1 tuple NO 0.4-02 turfR MAYBE 0.8-7 turner YES 0.1.7

TurtleGraphics YES 1.0-5

TUWmodel YES 0.1-4 tvd YES 0.1.0 tweedie YES 2.2.1 twitteR YES 1.1.7

TwoCop YES 1 twostageTE YES 1.2

TwoStepCLogit YES 1.2.3 ump NO 0.5-4 unbalanced NO 1.1

Unicode NO 0.1-5 uniCox YES 1 uniftest YES 1 uniReg YES 1

UPMASK NO 1

UScancer YES 0.1-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 80

Package Name Matches R Version

UScensus2010 YES 0.11

uuid YES 0.1-1

UWHAM YES 1

V - Z / Compatible with TERR The following CRAN packages starting with the letters V through Z ran successfully in the TIBCO Enterprise Runtime for R engine.

Package Name Matches R Version

vardiag NO 0.2-0

varSelRF NO 0.7-5

VarSwapPrice YES 1

vbdm YES 0.0.4

vbsr YES 0.0.5

Vdgraph NO 2.2-2

VdgRsm NO 1.3

vec2dtransf NO 1.1

vecsets YES 1.1

VecStatGraphs2D YES 1.7

vegclust NO 1.6.3

VIF YES 1

violinmplot NO 0.2.1

vioplot YES 0.2

visreg NO 2.1-0

visualize YES 4.2

vitality YES 1.1

VNM YES 2

VPdtw NO 2.1-10

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 81

Package Name Matches R Version

VSURF YES 0.8.2 vudc NO 1

W2CWM2C YES 1 waffect NO 1.2 waterfall MAYBE 0.9.9.20121030 waveband YES 4.6

WaveCD YES 1 wavelets NO 0.3-0 wavemulcor YES 1.2

WCE YES 1

WCQ NO 0.2

WDI NO 2.4 weatherData YES 0.4.1 webutils YES 0.2

WeightedPortTest YES 1 wesanderson MAYBE 0.3 whisker YES 0.3-2 wikibooks YES 0.2 wikipediatrend YES 0.2.0

WilcoxCV YES 1.0-2 windex YES 1

WMDB YES 1

WordPools NO 1.0-2 write.snns YES 0.0-4.2 wSVM NO 0.1-7

WWGbook YES 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 82

Package Name Matches R Version

XBRL YES 0.99.14 xhmmScripts YES 1.1 xtable NO 1.7-4 yacca NO 1.1 yhat NO 2.0-0

YieldCurve YES 4.1 ykmeans YES 1 zipcode YES 1 zoeppritz NO 1.0-4 zoom YES 2.0.4 zyp YES 0.10-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 83

TIBCO Enterprise Runtime for R Package Compatibility

We ran the packages available on January 30, 2015 on the Comprehensive R Archive Network (CRAN) website in a TIBCO Enterprise Runtime for R (TERR) engine (version 3.1—compatible with open-source R 3.1.2) running on a 64-bit 2008 Windows Server and collected the results. We ran any and all example code available in the package reference and vignettes. Our results indicate every status from total success to failure to load (or no examples). Statistics indicate the number of examples that passed and the number of examples that failed, comprising the total number. For a description of each possible result, see Summary of Package Tests. If you have R code that uses a package on this list, and if the package indicates a failure, note that the failure might not affect the functions in the package that you need. We recommend that you test your code for success. This section contains the details of the CRAN package test, one table for each letter of the alphabet for the package names.

Some results had to be manually adjusted, because the original test run failed to include code from package tests and vignettes. As a result, test statistics for some packages can be misleading. Please file a Service Request with Support to inform us of any differences you observe when running a package in TERR vs open-source R or to inform us of functionality that is missing from a package in TERR which you would like to see supported.

A B C D E F

G H I J K L

M N O P Q R

S T U V W X

Y Z

A / Package Compatibility Details CRAN packages with names beginning with A tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Name TERR Result Source R? Package Version

attribrisk failure NA 0.1

AUC success YES 0.3.0

AUCRF success YES 1.1

audio timedOut NA 0.1-5

audiolyzR success YES 0.4-9

audit failure NA 0.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 84

Matches Open- Package Name TERR Result Source R? Package Version

autoencoder success NO 1

automap cantLoad NA 1.0-14

autopls success NO 1.2-7

AutoSEARCH success YES 1.4

aws cantLoad NA 1.9-4

awsMethods success YES 1.0-3

aylmer failure NA 1.0-11

B / Package Compatibility Details CRAN packages with names beginning with B tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

B2Z failure NA 1.4

b6e6rl success YES 1.1

babel success YES 0.2-6

BaBooN failure NA 0.1-6

babynames noData NA 0.1

BACA cantLoad NA 0.99.0

BACCO failure NA 2.0-9

backtest failure NA 0.3-2

BACprior failure NA 2

BAEssd failure NA 1.0.1

bagRboostR success YES 0.0.2

BalancedSampling success YES 1.4

BaM cantLoad NA 0.99

bamboo cantLoad NA 0.9.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 85

Matches Open- Package Package Name TERR Result Source R? Version bamdit noExamples NA 1.1-1

BAMMtools failure NA 2.0.2 bams success YES 1.6 bandit failure NA 0.5.0

BANFF cantLoad NA 0.2

BANOVA cantLoad NA 0.2 barcode success YES 1.1 bartMachine cantLoad NA 1.1.1

BAS cantLoad NA 1 base64 noExamples NA 1.1 base64enc cantLoad NA NA baseline cantLoad NA 1.1-4 basicspace success NO 0.15

BASIX cantLoad NA NA

BaSTA cantLoad NA 1.9.3

BAT cantLoad NA 1.1 batade success YES 0.1 batch success YES 1.1-4

BatchExperiments cantLoad NA 1.4

BatchJobs cantLoad NA 1.5 batchmeans noExamples NA 1.0-2

BayClone2 success YES 1.1

BayesBridge failure NA 0.5 bayesclust success YES 3.1

BayesComm cantLoad NA 0.1-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 86

Matches Open- Package Package Name TERR Result Source R? Version bayescount failure NA 0.9.9-2

BayesCR noExamples NA 1

BayesDA success NO 2012.04-1 bayesDccGarch failure NA 1 bayesDem cantLoad NA 2.4-1

BayesFactor failure NA 0.9.9 bayesGARCH failure NA 2.0.1 bayesGDS failure NA 0.6.0

BayesGESM noExamples NA 1.2

BayesianAnimalTracker failure NA 1.2

Bayesianbetareg cantLoad NA 1.2

BayesLCA failure NA 1.6 bayesLife failure NA 2.1-3

BayesLogit failure NA 0.5.1 bayesm failure NA 2.2-5 bayesMCClust success MAYBE 1

BayesMed cantLoad NA 1 bayesmix cantLoad NA 0.7-3

BayesMixSurv failure NA 0.9

BayesNI failure NA 0.1 bayesPop failure NA 5.2-1 bayespref success YES 1 bayesQR timedOut NA 2.2 bayess timedOut NA 1.4

BayesSAE failure NA 1.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 87

Matches Open- Package Package Name TERR Result Source R? Version

BayesSingleSub failure NA 0.6.2 bayesSurv success YES 2.3-1 bayesTFR failure NA 4.0-11

Bayesthresh failure NA 2.0.1

BayesTree failure NA 0.3-1.2

BayesValidate success YES 0

BayesVarSel success NO 1.5.1

BayesX cantLoad NA 0.2-9

BayesXsrc timedOut NA 2.1-2

BayHap success YES 1.0.1

BayHaz failure NA 0.1-3

BaylorEdPsych failure NA 0.5 bayou cantLoad NA 1.0.1

BaySIC success YES 1

BAYSTAR failure NA 0.2-9

BB timedOut NA 2014.10-1 bbefkr success YES 4.2 bbemkr success YES 2

BBEST cantLoad NA 0.1-1

BBmisc cantLoad NA NA bbmle failure NA 1.0.17

BBMM success YES 3 bbo success YES 0.2

BBRecapture failure NA 0.1 bc3net failure NA 1.0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 88

Matches Open- Package Package Name TERR Result Source R? Version

BCA cantLoad NA 0.9-3

BCBCSF success YES 1.0-0

BCDating failure NA 0.9.7

BcDiag failure NA 1.0.7

BCE cantLoad NA 2.1

BCEA failure NA 2.1-0

BCEs0 failure NA 1.1

Bchron failure NA 4.1.1

Bclim noExamples NA 2.3.1 bclust cantLoad NA 1.4 bcp failure NA 3.0.1 bcpa failure NA 1.1 bcpmeta success NO 1 bcrm cantLoad NA 0.4.4 bcv failure NA 1 bda failure NA 3.2.0-3 bde cantLoad NA 1

BDgraph timedOut NA 2.14 bdoc success YES 1.2 bdpv success NO 1.1 bdscale cantLoad NA 1.2 bdsmatrix cantLoad NA NA bdvis cantLoad NA 0.1.0 bdynsys cantLoad NA 1.3 beadarrayFilter failure NA 1.1.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 89

Matches Open- Package Package Name TERR Result Source R? Version beadarrayMSV cantLoad NA 1.1.0 beanplot failure NA 1.2

BEANSP success YES 1 bear cantLoad NA 2.6.4

BEDASSLE cantLoad NA 1.5 beepr timedOut NA 1.1 beeswarm failure NA 0.1.6 benchden success YES 1.0.5 benchmark cantLoad NA 0.3-6

Benchmarking success MAYBE 0.24 benford.analysis cantLoad NA 0.1.1

BenfordTests success YES 1.1.1 bentcableAR failure NA 0.2.3

BEQI2 failure NA 2.0-0 ber failure NA 4

Bergm cantLoad NA 3.0.1

BerlinData failure NA 1.0.1 berryFunctions failure NA 1.7.1

Bessel failure NA 0.5-5

BEST cantLoad NA 0.2.2 bestglm failure NA 0.34 betafam success YES 1 betapart cantLoad NA 1.3 betaper success YES 1.1-0 betareg cantLoad NA 3.0-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 90

Matches Open- Package Package Name TERR Result Source R? Version betas cantLoad NA 0.1.0 betategarch success YES 3.2 bethel success NO 0.2 bezier failure NA 1.1 bfa cantLoad NA 0.3.1 bfast failure NA 1.5.7 bfp cantLoad NA 0.0-27 bgeva failure NA 0.3 bglm success NO 1

BGLR success NO 1.0.3 bgmm success NO 1.7

BGPhazard success YES 1.1

BGSIMD failure NA 1

BH noExamples NA 1.55.0-3

Bhat success YES 0.9-10

BHH2 failure NA 2012.04-0

BHMSMAfMRI success YES 1 biasbetareg failure NA 1

BiasedUrn failure NA 1.06.1 bibtex cantLoad NA NA biclust failure NA 1.0.2

BiDimRegression success NO 1.0.6 bifactorial timedOut NA 1.4.7

BIFIEsurvey cantLoad NA 1.1 bigdata failure NA 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 91

Matches Open- Package Package Name TERR Result Source R? Version biglars failure NA 1.0.2 biglm success NO 0.9-1 bigmemory.sri noData NA 0.1.3 bigrquery failure NA 0.1.0 bigRR cantLoad NA 1.3-10 bigsplines cantLoad NA NA

BigTSP failure NA 1 bild success NO 1.1-3 bimetallic success YES 1 binda success YES 1.0.1 bindata cantLoad NA 0.9-19 binequality success MAYBE 0.6.1 bingat cantLoad NA 1.1 binGroup success NO 1.1-0 binhf failure NA 1.0-1 binMto success YES 0.0-6

BinNonNor failure NA 1

BinNor success YES 2 binom failure NA 1.1-1 binomialcftp success YES 1 binomlogit success MAYBE 1.2 binomSamSize success NO 0.1-3 binomTools failure NA 1.0-1 binr noExamples NA 1 binseqtest cantLoad NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 92

Matches Open- Package Package Name TERR Result Source R? Version bio.infer success NO 1.3-3 bio3d timedOut NA 2.1-3

Biodem success YES 0.3

BiodiversityR cantLoad NA 2.5-1

BioGeoBEARS cantLoad NA 0.2.1 biogram cantLoad NA 1

Biograph cantLoad NA 2.0.4 biom success NO 0.3.12

BIOM.utils failure NA 0.9

BioMark success NO 0.4.2 biomod2 cantLoad NA 3.1-64 bionetdata success YES 1.0.1 biopara success YES 1.5

BioPhysConnectoR success NO 1.6-10 bioPN cantLoad NA 1.2.0 bios2mds cantLoad NA 1.2.2

BioStatR success MAYBE 2.0.0 biotools timedOut NA 1.2 bipartite cantLoad NA 2.05 biplotbootGUI success NO 1

BIPOD success YES 0.2.1 birdring cantLoad NA 1.2 birk success YES 1.2 bisectr noData NA 0.1.0

BiSEp cantLoad NA 2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 93

Matches Open- Package Package Name TERR Result Source R? Version bisoreg noExamples NA 1.1 bit cantLoad NA NA bit64 cantLoad NA 0.9-4 bitops cantLoad NA NA bivarRIpower success YES 1.2 biwavelet failure NA 0.17.5 biwt cantLoad NA 1 bizdays success YES 0.1.5

BlakerCI success YES 1.0-4

BlandAltmanLeh failure NA 0.1.0

Blaunet failure NA 1.0.1 blender success NO 0.1.2 blighty success NO 3.1-4 blkergm cantLoad NA 1.1 blm failure NA 2013.2.4.4 blme failure NA 1.0-2 blockcluster failure NA 3.0.2 blockmatrix success YES 1

BlockMessage success YES 1 blockmodeling success NO 0.1.8 blockrand success YES 1.3 blocksdesign success YES 1.4 blockTools cantLoad NA 0.6-2 blowtorch cantLoad NA 1.0.2 blsAPI cantLoad NA 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 94

Matches Open- Package Package Name TERR Result Source R? Version

BMA cantLoad NA NA bmd timedOut NA 0.5 bmem noExamples NA 1.5

BMhyd success YES 1.2-2

Bmix cantLoad NA 0.4 bmk success YES 1 bmmix cantLoad NA 0.1-2

BMN success YES 1.02 bmp success YES 0.2 bmrm success YES 3

BMS success NO 0.3.3

BNDataGenerator failure NA 1 bnlearn cantLoad NA 3.7.1 bnormnlr success YES 1

BNPdensity failure NA 2013.8 bnpmr success MAYBE 1.1

BNSP success YES 1.0.2 boa noData NA 1.1.7-2 boilerpipeR cantLoad NA 1.2.2

BOIN success YES 1 bold noExamples NA 0.2.0

Bolstad failure NA 0.2-25

Bolstad2 failure NA 1.0-28 boolean3 failure NA 3.1.6

BoolNet timedOut NA 2.0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 95

Matches Open- Package Package Name TERR Result Source R? Version

Boom success NO 0.2

BoomSpikeSlab failure NA 0.5.2 boostr failure NA 1.0.0 boostSeq success NO 1 boot failure NA 1.3-13 bootES noData NA 1.01 bootLR failure NA 0.9

BootPR failure NA 0.6 bootRes success NO 1.2.3 bootruin success YES 1.2-1 bootspecdens success YES 3 bootStepAIC failure NA 1.2-0 bootstrap failure NA 2014.4 bootSVD success NO 0.1 boral cantLoad NA 0.6

Boruta success YES 4.0.0 boss failure NA 2.1

BoSSA success YES 1.2 boussinesq success YES 1.0.3 boxplotdbl failure NA 1.2.2 bpca cantLoad NA 1.2-2 bpcp failure NA 1.2.4 bPeaks success YES 1.2 bpkde cantLoad NA 1.0-7 bqtl success NO 1.0-30

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 96

Matches Open- Package Package Name TERR Result Source R? Version

BradleyTerry2 cantLoad NA 1.0-5

BrailleR failure NA 0.11 brainR cantLoad NA 1.2 brainwaver failure NA 1.6 branchLars failure NA 1 breakage success YES 1.1-1 breakaway success NO 1 breakpoint cantLoad NA 1.1 bReeze noExamples NA 0.4-0 brew success NO 1.0-6 brewdata failure NA 0.4 brglm cantLoad NA NA bride success MAYBE 1.3

Brobdingnag success MAYBE 1.2-4 broman failure NA 0.48-2 broom failure NA 0.3.5

Brq failure NA 1

BRugs cantLoad NA 0.8-3

BSagri failure NA 0.1-8

BSDA failure NA 1.01

BSGW failure NA 0.9 bshazard success YES 1

BsMD success NO 2013.0718 bspec failure NA 1.4 bspmma noExamples NA 0.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 97

Matches Open- Package Package Name TERR Result Source R? Version

BSquare success YES 1.1

BSSasymp failure NA 1.1-0

bst success YES 0.3-4

bsts cantLoad NA 0.6.1

btf noExamples NA 1.1

BTSPAS cantLoad NA 2014.0901

BTYD cantLoad NA 2.4

bujar failure NA 0.1-4

BurStFin success NO 1.02

BurStMisc success YES 1

bursts success YES 1.0-1

bvarsv noExamples NA 1

bvenn success YES 0.1

bvls cantLoad NA NA

bvpSolve cantLoad NA 1.2.4

BVS cantLoad NA 4.12.1

C / Package Compatibility Details CRAN packages with names beginning with C tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

c060 cantLoad NA 0.2-4

c3net cantLoad NA 1.1.1

C50 success NO 0.1.0-21

ca success NO 0.58

cabootcrs failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 98

Matches Open- Package Package Name TERR Result Source R? Version cacIRT success YES 1.3

CaDENCE success NO 1.2.1

CADFtest failure NA 0.3-2 cAIC4 failure NA 0.2

Cairo cantLoad NA NA cairoDevice failure NA 2.21

CALIBERrfimpute failure NA 0.1-6 calibrate success NO 1.7.2 calibrator cantLoad NA 1.2-6

CALINE3 noData NA 1.0-2 calmate cantLoad NA 0.11.0

CAMAN success NO 0.72 camel cantLoad NA 0.2.0 cancerTiming failure NA 2.0.0 candisc failure NA 0.6-5 cape cantLoad NA 1.3 caper timedOut NA 0.5.2 capm cantLoad NA 0.5 capushe success NO 1 capwire failure NA 1.1.4 car noData NA 2.0-22

CARBayes failure NA 4

CARBayesST success YES 1.1 carcass failure NA 1.3 cardidates failure NA 0.4.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 99

Matches Open- Package Package Name TERR Result Source R? Version care success NO 1.1.7

CARE1 success YES 1.1.0 caret cantLoad NA 1.0.0 caretEnsemble cantLoad NA 1.0.0 caribou success YES 1.1

CarletonStats failure NA 1.1 caroline failure NA 0.7.6 caschrono cantLoad NA 1.4 caseMatch success NO 1.0.1 cat failure NA 0.0-6.5 catdata failure NA 1.2.1

CatDyn noData NA 1.0-5 catenary failure NA 1.1

CateSelection success YES 1 cati cantLoad NA 0.8 catIrt success YES 0.5-0 catnet timedOut NA 1.14.5 caTools cantLoad NA NA catR noExamples NA 3.4 catspec failure NA 0.97 causaleffect cantLoad NA 1

CausalGAM noExamples NA 0.1-3 causalsens success NO 0.1

CAvariants cantLoad NA 2.1 cba cantLoad NA 0.2-14

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 100

Matches Open- Package Package Name TERR Result Source R? Version

CBPS noExamples NA 0.9

CCA failure NA 1.2

CCAGFA failure NA 1.0.4 ccaPP cantLoad NA 0.3.0 cccd failure NA 1.04 ccChooser success NO 0.2.6 cccrm cantLoad NA 1.1 ccda failure NA 1.1 ccgarch failure NA 0.2.3 cchs success YES 0.1.0 cclust success YES 0.6-19

CCM success YES 1.1

CCP success YES 1.1

CCpop success NO 1

CCTpack cantLoad NA 1.4 cda cantLoad NA 1.5.1 cdb cantLoad NA 0.0.1 cdcsis cantLoad NA 1

CDFt success YES 1.0.1

CDLasso success YES 1.1

CDM cantLoad NA NA

CDNmoney success NO 2012.4-1

CDVine timedOut NA 1.2

CEC failure NA 0.9.2 cec2005benchmark success YES 1.0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 101

Matches Open- Package Package Name TERR Result Source R? Version cec2013 success YES 0.1-5

CEGO success MAYBE 1.0.1108 celestial failure NA 1.2

CellularAutomaton success YES 1.1-1 cellVolumeDist failure NA 1.3 cem timedOut NA 1.1.10 censNID cantLoad NA 0-0-1 censReg cantLoad NA 0.5-20

CensRegMod noExamples NA 0 cents failure NA 0.1-41

CePa timedOut NA 0.5 cepp failure NA 1

CerioliOutlierDetection cantLoad NA 1.0.8 cfa success NO 0.9-3

CfEstimateQuantiles success YES 1 cg cantLoad NA 1.0-2 cgam success NO 1.2 cgAUC success YES 1.2.1 cgdsr success YES 1.1.33 cggd failure NA 0.8 cgh cantLoad NA 1.0-7.1 cghFLasso failure NA 0.2-1 cghseg success NO 1.0.2

CGP success YES 2.0-2

ChainLadder cantLoad NA 0.1.9

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 102

Matches Open- Package Package Name TERR Result Source R? Version changepoint cantLoad NA NA

ChargeTransport success NO 1.0.2

CHAT cantLoad NA 1.1

CHCN failure NA 1.5 cheb success YES 0.3 chebpol success MAYBE 1.3-1367

CheckDigit success YES 0.1-1 checkmate cantLoad NA NA checkpoint failure NA 0.3.3 cheddar failure NA 0.1-626 chemCal success NO 0.1-34 chemometrics cantLoad NA 1.3.9

ChemometricsWithR failure NA 0.1.8

ChemometricsWithRData success YES 0.1.3 chemosensors cantLoad NA 0.7.8

ChemoSpec cantLoad NA 2.0-2 cherry cantLoad NA 0.5-10 childsds success NO 0.5 chillR failure NA 0.54 chipPCR cantLoad NA 0.0.8-3 chngpt failure NA 2014.12-2

CHNOSZ failure NA 1.0.3.1 choiceDes success YES 0.9-1

ChoiceModelR success YES 1.2 choplump success NO 1.0-0.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 103

Matches Open- Package Package Name TERR Result Source R? Version chords failure NA 0.9 choroplethr cantLoad NA 2.1.1 choroplethrAdmin1 cantLoad NA 1.0.0 choroplethrMaps success YES 1 chromer cantLoad NA 0.1 chromoR cantLoad NA 1 chron cantLoad NA NA

CHsharp failure NA 0.3

CIDnetworks cantLoad NA 0.6.0

CIFsmry success YES 1.0.1 cin success YES 0.1

CINID failure NA 1.2

CINOEDV timedOut NA 2

CircE success NO 1.1 circlize noData NA 0.2.0

CircNNTSR failure NA 2.1

CircStats success YES 0.2-4 circular failure NA 0.4-7

CITAN timedOut NA 2014.12-1 citbcmst failure NA 1.0.4 citccmst failure NA 1.0.2

CityPlot noExamples NA 2 cjoint failure NA 1.0.3

Ckmeans.1d.dp success YES 3.02 cladoRcpp success MAYBE 0.14.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 104

Matches Open- Package Package Name TERR Result Source R? Version

CLAG failure NA 2.18.1 class cantLoad NA NA classGraph cantLoad NA 0.7-4 classifly failure NA 0.4 classify cantLoad NA 1.3 classInt failure NA 0.1-22 classyfire cantLoad NA 0.1-2 clere success NO 1.1 clhs cantLoad NA 0.5-4

ClickClust failure NA 1.1.3 clickstream timedOut NA 1.1.3

ClimClass success NO 1 climdex.pcic cantLoad NA 1.1-4 clime success YES 0.4.1 clinfun cantLoad NA 1.0.6 clinsig failure NA 1.0-4 clinUtiDNA success YES 1

CLME cantLoad NA 2.0-1 clogitL1 success YES 1.4 cloudUtil failure NA 0.1.10 clpAPI success MAYBE 1.2.6

CLSOCP success YES 1 clue success NO 0.3-48 clues failure NA 0.5-4 cluster failure NA 1.15.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 105

Matches Open- Package Package Name TERR Result Source R? Version cluster.datasets success YES 1.0-1 clusterCrit success YES 1.2.4 clusterfly cantLoad NA 0.4 clustergas success YES 1 clusterGeneration success YES 1.3.1 clusterGenomics failure NA 1 clusterPower success YES 0.5 clusterRepro success YES 0.5-1.1 clusterSim cantLoad NA 0.44-1 clusteval failure NA 0.1 clusthaplo success YES 1.2 clustMD cantLoad NA 1

ClustOfVar success NO 0.8 clustrd cantLoad NA 0.1.2 clustsig noExamples NA 1.1

ClustVarLV success NO 1.3.1 clustvarsel cantLoad NA 2.1 clv failure NA 0.3-2.1 clValid failure NA 0.6-6 cmaes success YES 1.0-11

CMC success YES 1

CMF success YES 1 cmm failure NA 0.8

CMPControl success YES 1 cmprsk failure NA 2.2-7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 106

Matches Open- Package Package Name TERR Result Source R? Version cmprskQR success YES 0.9.0 cmrutils failure NA 1.2-2 cmvnorm success YES 1 cna failure NA 1.0-2 cncaGUI cantLoad NA 0.0-2

CNOGpro failure NA 1.1

CNprep failure NA 2

CNVassoc failure NA 2.0.1

CNVassocData noData NA 1 coalescentMCMC timedOut NA 0.4 coarseDataTools timedOut NA 0.6-2

COBRA success YES 0.99.4 cobs failure NA 1.3-0 cobs99 failure NA 0.9-12

CoClust cantLoad NA 0.3-0 cocor failure NA 1.1-0 cocorresp failure NA 0.2-3 cocron success NO 1.0-0 coda success YES 0.16-1 codadiags success YES 1 codep success NO 0.4-1 codetools failure NA 0.2-9 coefficientalpha success YES 0.3.3 coefplot success NO 1.2.0 coenocliner failure NA 0.1-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 107

Matches Open- Package Package Name TERR Result Source R? Version coexist success YES 1

CoImp cantLoad NA 0.2-3 coin failure NA 1.0-24

CoinMinD success YES 1.1 cold failure NA 1.0-3

CollocInfer timedOut NA 1.0.1 coloc cantLoad NA 2.3-1 colorfulVennPlot success YES 2.4 colorRamps success NO 2.3 colorspace cantLoad NA NA colortools failure NA 0.1.5 colourlovers success MAYBE 0.1.4 comato cantLoad NA 1 combinat success YES 0.0-8

CombinePValue success YES 1

CombinS success NO 1

CombMSC failure NA 1.4.2 comclim failure NA 0.9.4 commandr failure NA 1.0.1 commentr failure NA 0.1

CommonJavaJars success YES 1.0-5

CommonTrend failure NA 0.7-1

CommunityCorrelogram success YES 1

Comp2ROC success YES 1 compactr success YES 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 108

Matches Open- Package Package Name TERR Result Source R? Version compare failure NA 0.2-5 compareC success NO 1.3.1 compareGroups failure NA 3 compareODM noExamples NA 1.2

CompareTests failure NA 1 comparison success MAYBE 1.0-4 compeir failure NA 1

CompGLM failure NA 1 compHclust success NO 1.0-2

Compind cantLoad NA 1 compLasso success MAYBE 0.0-1 complmrob cantLoad NA 0.5.8

CompLognormal success YES 3 compoisson success YES 0.3

COMPoissonReg failure NA 0.3.4 compositions cantLoad NA 1.40-1 compound.Cox failure NA 1.4

Compounding cantLoad NA 1.0.2

CompQuadForm cantLoad NA 1.4.1

CompRandFld cantLoad NA 1.0.3-3 compute.es success YES 0.2-4

ConConPiWiFun failure NA 0.4.4 concor success YES 1.0-0.1 concreg success NO 0.5 cond success NO 1.2-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 109

Matches Open- Package Package Name TERR Result Source R? Version condGEE failure NA 0.1-4 condmixt failure NA 1

CondReg failure NA 0.2 coneproj success NO 1.5 conf.design success YES 2.0.0 confidence failure NA 1.1-0 conformal cantLoad NA 0.1 confreq timedOut NA 1.3 conics success NO 0.3 conjoint cantLoad NA 1.39

ConjointChecks failure NA 0.0.9

ConnMatTools timedOut NA 0.1.5 constrainedKriging cantLoad NA 0.2.3 contfrac success YES 1.1-9 conting failure NA 1.4 contrast success NO 0.19

ConvCalendar success YES 1.2

ConvergenceConcepts cantLoad NA 1.1 cooccur success MAYBE 1.2 cooptrees cantLoad NA 1

COP failure NA 1.0-2

COPASutils noExamples NA 0.1.6 copBasic failure NA 1.7.0 copCAR cantLoad NA 1 cope failure NA 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 110

Matches Open- Package Package Name TERR Result Source R? Version copula cantLoad NA 0.999-12 copulaedas cantLoad NA 1.4.1

CopulaRegression timedOut NA 0.1-5

CopyDetect cantLoad NA 1.1 corclass failure NA 0.1 corcounts success YES 1.4

CORE success YES 3

CORElearn cantLoad NA NA coreTDT success YES 1 corHMM cantLoad NA 1.15

CORM success YES 1.0.2 corpcor failure NA 1.6.7 corpora success NO 0.4-3

CorrBin cantLoad NA 1.5

CorReg cantLoad NA 1 correlate failure NA 1

Correlplot success NO 1.0-2 corrgram success NO 1.6 corrplot failure NA 0.73 corrsieve success NO 1.6-8 corTools success YES 1

COSINE success YES 2.1 cosinor cantLoad NA 1.1 cosmoFns failure NA 1.0-1

CosmoPhotoz cantLoad NA 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 111

Matches Open- Package Package Name TERR Result Source R? Version cosmosR success YES 1 cosso success MAYBE 2.1-1 costat success YES 2.3 cotrend success YES 1 couchDB noExamples NA 1.3.0

COUNT failure NA 1.3.2 countrycode success YES 0.18

CountsEPPM failure NA 2 covLCA success YES 1 covreg success YES 1 covRobust success YES 1.1-0

CovSel success MAYBE 1.1 covTest success MAYBE 1.02

CoxBoost success MAYBE 1.4 coxinterval cantLoad NA 1 coxme cantLoad NA NA coxphf success YES 1.11 coxphw failure NA 3.0.0

CoxRidge success NO 0.9.1 coxrobust failure NA 1

CP failure NA 1.5 cpa success YES 1 cpca success NO 0.1.2

CPE failure NA 1.4.4

CpGassoc failure NA 2.11

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 112

Matches Open- Package Package Name TERR Result Source R? Version

CpGFilter failure NA 1

CPHshape success YES 1.0.1 cpk success YES 1.3-1 cplm failure NA 0.7-2

CPMCGLM success YES 1.1

Cprob cantLoad NA 1.2.4 cquad success YES 1

CR success YES 1

CRAC failure NA 1 crackR success YES 0.3-9 cramer success YES 0.9-1 crank success YES 1.0-7 crantastic noExamples NA 0.1 crawl failure NA 1.4-1 crayon failure NA 1.1.0 crblocks failure NA 0.9-1 crch failure NA 0.1-0

CreditMetrics success YES 0.0-2

CRF failure NA 0.3-8 crimCV success YES 0.9.3

CRM cantLoad NA 1.1.1 crmn failure NA 0.0.20 crn success YES 1.1 crossdes success YES 1.1-1 crossmatch failure NA 1.3-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 113

Matches Open- Package Package Name TERR Result Source R? Version

Crossover cantLoad NA 0.1-13 crossReg success YES 1 crossval success YES 1.0.2 crp.CSFP success NO 2 crqa success NO 1.0.5 crrSC success YES 1.1 crrstep failure NA 2014-07.16 crs cantLoad NA 0.15-24

CRTSize success YES 0.3

CrypticIBDcheck failure NA 0.3-1 csampling success YES 1.2-2 cSFM success NO 1.1 cshapes success MAYBE 0.4-2 cslogistic success MAYBE 0.1-3 csn success YES 1.1.1

CSS success NO 1.0.2 csSAM failure NA 1.2.4 cstar failure NA 1 csvread noExamples NA 1.1 cts failure NA 1.0-19

CTT success NO 2.1 ctv success NO 0.8-1 cubature cantLoad NA NA cubfits failure NA 0.1-0

Cubist failure NA 0.0.18

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 114

Matches Open- Package Package Name TERR Result Source R? Version cudaBayesregData noData NA 0.3-11 cudia success YES 0.1

CUMP noExamples NA 1 cumplyr success YES 0.1-1 cumSeg noExamples NA 1.1 curl cantLoad NA NA currentSurvival success YES 1 curvetest failure NA 2.2 curvHDR failure NA 1.0-3 cutoffR success MAYBE 1 cuttlefish.model failure NA 1 cvAUC cantLoad NA 1.1.0

CVcalibration success YES 1.0-1 cvplogistic success YES 3.1-0 cvq2 cantLoad NA 1.2.0

CVST failure NA 0.2-1

CVThresh success NO 1.1.1 cvTools cantLoad NA 0.3.2

CVTuningCov success YES 1 cvxclustr cantLoad NA 1.1.1 cwhmisc failure NA 5 cwm failure NA 0.0.3 cxxfunplus success YES 1 cycloids success YES 1 cyphid success YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 115

Matches Open- Package Package Name TERR Result Source R? Version

cytoDiv success MAYBE 0.5-3

D / Package Compatibility Details CRAN packages with names beginning with D tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

D2C timedOut NA 1.1

d3Network success YES 0.5.1

DAAG timedOut NA 1.2

DAAGbio failure NA 0.62

DAAGxtras success NO 0.8-4

dae failure NA 2.4-0

daewr cantLoad NA 1.1-4

dafs failure NA 1.0-37

dagbag success NO 1.1

DAGGER success YES 1.4

dagR success NO 1.1.3

Daim cantLoad NA 1.1.0

DAKS failure NA 2.1-2

DALY noExamples NA 1.4.0

DAMisc cantLoad NA 1.3

DAMOCLES cantLoad NA 1

dams failure NA 0.1

DandEFA failure NA 1.5

darch noExamples NA 0.9.1

darts success NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 116

Matches Open- Package Package Name TERR Result Source R? Version dashboard success YES 0.1.0 data.table cantLoad NA NA

DatABEL cantLoad NA 0.9-5 datacheck cantLoad NA 1.0.4

DataCombine cantLoad NA 0.2.7.1 dataframes2xls success NO 0.4.6 datalist failure NA 0.2 datamap cantLoad NA 0.1-1 datamart failure NA 0.5.2 datamerge success YES 1.0-1 dataQualityR success NO 1 dataRetrieval failure NA 2.1.0 datautils success YES 0.1.4 dataview failure NA 2.0-9 date cantLoad NA NA

DATforDCEMRI failure NA 0.55 dave failure NA 1.5

Davies success NO 1.1-8 dawai success YES 1.1 db.r success NO 0.1.3 dbarts cantLoad NA 0.8-5 dbEmpLikeGOF success YES 1.2.4 dbEmpLikeNorm success YES 1.0.0

DBFTest success YES 1

DBGSA success YES 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 117

Matches Open- Package Package Name TERR Result Source R? Version

DBI failure NA 0.3.1

DBKGrad cantLoad NA 1.6 dblcens success YES 1.1.7 dbmss cantLoad NA 2.1.2 dbstats failure NA 1.0.4 dcemriS4 failure NA 0.51

DCGL timedOut NA 2.1.2 dcGOR cantLoad NA 1.0.4

DCL failure NA 0.1.0 dclone failure NA 2.0-0

DCluster cantLoad NA 0.2-6 dcmle cantLoad NA 0.2-4 dcmr failure NA 1 dcv success YES 0.1.1 ddalpha cantLoad NA 1.1.0

DDD success YES 2.6

DDHFm failure NA 1.1.1

DDIwR cantLoad NA 0.2-0 ddst success YES 1.03 deal timedOut NA 1.2-37 deamer success NO 1 debug cantLoad NA 1.3.1 decctools cantLoad NA 0.2.0

DECIDE success YES 1.2 decompr noData NA 1.3.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 118

Matches Open- Package Package Name TERR Result Source R? Version decon failure NA 1.2-4

Deducer cantLoad NA 0.7-7

DeducerExtras noData NA 1.7

DeducerPlugInExample noData NA 0.2-0

DeducerPlugInScaling noData NA 0.1-0

DeducerSpatial cantLoad NA 0.7

DeducerSurvival noData NA 0.1-0

DeducerText cantLoad NA 0.1-2 deducorrect cantLoad NA 1.3-5 deepnet success YES 0.2

DEEPR failure NA 0.1 degenes success YES 1.1 degreenet cantLoad NA 1.2

Delaporte failure NA 2.2-2 deldir cantLoad NA NA deltaPlotR success YES 1.5

Demerelate cantLoad NA 0.8-1

DEMEtics success YES 0.8-7 demi success YES 1.1.1 deming success NO 1.0-1 demography cantLoad NA 1.18 demoKde success NO 0.9-3 dendextend timedOut NA 0.17.5 dendextendRcpp failure NA 0.5.1 dendroextras failure NA 0.2.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 119

Matches Open- Package Package Name TERR Result Source R? Version

DendSer failure NA 1.0.1 dendsort failure NA 0.3.2 denpro success NO 0.9.1

Density.T.HoldOut noExamples NA 2 densityClust success NO 0.1-1 denstrip failure NA 1.5.3

DEoptim cantLoad NA 1.0-2

DEoptimR success YES 1.0-2 depend.truncation failure NA 2.1 depmixS4 failure NA 1.3-2 depth cantLoad NA 2.0-0

DepthProc cantLoad NA 1.0.3 depthTools success NO 0.4

Deriv noExamples NA 1 descomponer success NO 1.1 descr success YES 1.0.4

DescribeDisplay failure NA 0.2.4

DescTools noData NA 0.99.8.1 deseasonalize failure NA 1.35 designGG failure NA 1.1 desirability failure NA 1.6 desire cantLoad NA 1.0.7

DESnowball success YES 1 deSolve cantLoad NA NA detect failure NA 0.3-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 120

Matches Open- Package Package Name TERR Result Source R? Version deTestSet cantLoad NA 1.1.2

DetMCD cantLoad NA 0.0.1 detrendeR success YES 1.0.4

DetSel failure NA 1.0.2 devEMF cantLoad NA 2

Devore7 failure NA 0.7.6 devtools cantLoad NA NA df2json success YES 0.0.2 dfcomb success YES 2.0-2 dfcrm failure NA 0.2-2 dfexplore success NO 0.2.1

DFIT failure NA 1.0-1 dfmta success YES 1.1-2 dfoptim success YES 2011.8-1 dglars success NO 1.0.5 dglm failure NA 1.8.1 dgmb failure NA 1.1 dgof failure NA 1.2 dhglm failure NA 1.2 diagram success NO 1.6.3

DiagrammeR noExamples NA 0.1

DiagTest3Grp failure NA 1.6 diaplt failure NA 1.2.1 dice success YES 1.2

DiceDesign failure NA 1.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 121

Matches Open- Package Package Name TERR Result Source R? Version

DiceEval failure NA 1.3

DiceKriging cantLoad NA NA

DiceOptim cantLoad NA 1.4

DiceView cantLoad NA 1.3-1 dichromat failure NA 2.0-0 dicionariosIBGE success NO 1.6 dielectric failure NA 0.2.3 diffdepprop success YES 0.1-9 diffEq cantLoad NA 1.0-1 diffeR failure NA 0.0-1 diffIRT success YES 1.4 diffractometry success YES 0.1-8 diffusionMap cantLoad NA 1.1-0

DIFlasso noExamples NA 1.0-1 difR cantLoad NA 4.5 digest cantLoad NA NA

Digiroo2 cantLoad NA 0.6 digitalPCR success YES 1 dils failure NA 0.8.1

DIME failure NA 1.2 dinamic failure NA 1 diptest failure NA 0.75-6

DIRECT noExamples NA 1 directlabels timedOut NA 2013.6.15 directPA failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 122

Matches Open- Package Package Name TERR Result Source R? Version

DirichletReg cantLoad NA 0.6-1 dirmult failure NA 0.1.3-4

Disake success YES 1 disclap success YES 1.5 disclapmix failure NA 1.6

DiscML failure NA 1.0.1

DiscreteInverseWeibull success NO 1.0.1

DiscreteLaplace success YES 1 discreteMTP success NO 0.1-2 discreteRV success NO 1.1.3

DiscreteWeibull failure NA 1 discretization success NO 1.0-1 discrimARTs failure NA 0.2

DiscriMiner noExamples NA 0.1-29 diseasemapping timedOut NA 1.1.5 diskmemoiser cantLoad NA 1.0-1 dismo cantLoad NA NA disp2D cantLoad NA 1 displayHTS success NO 1 dispmod timedOut NA 1.1 disposables failure NA 1.0.0 dissUtils success YES 1

Distance failure NA 0.9.2

DistatisR failure NA 1 distfree.cr success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 123

Matches Open- Package Package Name TERR Result Source R? Version distillery success YES 1.0-1 distory success YES 1.4.2 distr cantLoad NA NA distrDoc timedOut NA 2.5 distrEllipse failure NA 2.5 distrEx timedOut NA 2.5

DistributionUtils cantLoad NA NA distrMod timedOut NA 2.5.3 distrom failure NA 0.3-1 distrRmetrics failure NA 2.5 distrSim failure NA 2.5.2 distrTeach failure NA 2.5 distrTEst failure NA 2.5 divagis noExamples NA 1.0.0

DivE cantLoad NA 1 diveMove cantLoad NA 1.3.9 diversitree cantLoad NA 0.9-7 diveRsity cantLoad NA 1.9.73

DiversitySampler success YES 2.1

DivMelt success NO 1.0.3 divo success YES 0.1.1 dixon cantLoad NA 0.0-5 dkDNA success YES 0.1.0 dlm failure NA 1.1-4 dlmap failure NA 1.13

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 124

Matches Open- Package Package Name TERR Result Source R? Version dlmodeler timedOut NA 1.4-2

DLMtool failure NA 1.34 dlnm failure NA 2.1.3 dma failure NA 1.2-2

DMR failure NA 2 dmt success NO 0.8.20

DMwR failure NA 0.4.1 dna failure NA 1.1-1

DNAprofiles success YES 0.2

DNAtools success YES 0.1-21

DnE success NO 2.1.0 dnet noData NA 1.0.6

DOBAD failure NA 1.0.4 doBy failure NA 4.5-13 docopt success YES 0.4.2 documair cantLoad NA 0.6-0

Dodge success NO 0.8

DoE.base failure NA 0.26-3

DoE.wrapper timedOut NA 0.8-10

Dominance timedOut NA 1.0.0 domino noExamples NA 0.2-1 doParallel failure NA 1.0.8 doRedis cantLoad NA 1.1.1 doRNG cantLoad NA 1.6

DoseFinding timedOut NA 0.9-12

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 125

Matches Open- Package Package Name TERR Result Source R? Version doSNOW failure NA 1.0.12 dosresmeta failure NA 1.3.0 dostats failure NA 1.3.1 dotenv success YES 1

DoubleCone failure NA 1

DoubleExpSeq failure NA 1

DOvalidation failure NA 0.1.0 downloader cantLoad NA 0.3 dpa cantLoad NA 1.0-3 dpcR cantLoad NA 0.1.3.2 dpglasso success YES 1 dplR cantLoad NA 1.6.2 dplyr timedOut NA NA dpmixsim success NO 0.0-8

DPpackage cantLoad NA 1.1-6

DPw cantLoad NA 1.1.3 dr failure NA 3.0.9 drawExpression failure NA 1 drc timedOut NA 2.3-96 drfit fatalError NA 0.6.3 drgee success YES 1.0.1 drm failure NA 0.5-8 drmdel success YES 1.3.1 dropR success YES 0.1 drsmooth cantLoad NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 126

Matches Open- Package Package Name TERR Result Source R? Version ds failure NA 3 dsample success YES 0.91.1

DSBayes failure NA 1.1 dse timedOut NA 2014.11-1

DSL cantLoad NA NA dslice cantLoad NA 1.1.4 dsm cantLoad NA 2.2.5

DSpat cantLoad NA 0.1.6

DSsim cantLoad NA 1.0.2 dst success YES 0.3

DStree cantLoad NA 1

DTComPair success YES 1.0.3

DTDA failure NA 2.1-1 dti cantLoad NA 1.2-0.1

DTK failure NA 3.5

DTMCPack success YES 0.1-2

DTR success YES 1.5 dtt success YES 0.1-2 dtw failure NA 1.17-1 dualScale failure NA 0.9.1 dummies success YES 1.5.6 dummy success YES 0.1.0 dunn.test success YES 1.2.2

DunnettTests failure NA 2 dupiR failure NA 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 127

Matches Open- Package Package Name TERR Result Source R? Version

dvfBm timedOut NA 1

DVHmetrics cantLoad NA 0.1

dvn noExamples NA 0.3.3

dygraphs failure NA 0.3.3

dyn failure NA 0.2-9

DynamicDistribution failure NA 1.1

dynamicGraph failure NA 0.2.2.6

dynamicTreeCut success YES 1.62

dynatopmodel cantLoad NA 1

dynaTree failure NA 1.2-7

dynBiplotGUI cantLoad NA 1.1.2

DynClust noExamples NA 3.13

dynCorr failure NA 0.1-2

dynia failure NA 0.2

dynlm failure NA 0.3-3

DynNom cantLoad NA 1

dynsim failure NA 1

dynsurv success YES 0.2-2

E / Package Compatibility Details CRAN packages with names beginning with E tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

e1071 cantLoad NA NA

eaf failure NA 1.07

earlywarnings cantLoad NA 1.0.59

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 128

Matches Open- Package Package Name TERR Result Source R? Version earth failure NA 4.2.0

EasyABC success YES 1.4 easyanova failure NA 4

EasyHTMLReport noExamples NA 0.1.1

EasyMARK cantLoad NA 1 easynls success NO 4

EasyStrata cantLoad NA 8.6 eba timedOut NA 1.7-1 ebal success YES 0.1-6

EbayesThresh success YES 1.3.2 ebdbNet cantLoad NA 1.2.3

EBEN success NO 1.1.1

EBglmnet success YES 3.6

EBMAforecast success NO 0.42

EBS failure NA 3 ebSNP success YES 1

Ecdat cantLoad NA 0.2-7 ecespa cantLoad NA 1.1-7

Ecfun cantLoad NA 0.1-3 ecipex failure NA 1 ecodist success NO 1.2.9 ecoengine timedOut NA 1.6

EcoHydRology failure NA 0.4.12 ecolMod failure NA 1.2.6 ecoreg failure NA 0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 129

Matches Open- Package Package Name TERR Result Source R? Version ecoretriever success NO 0.1 ecosim success NO 1.2 ecospat cantLoad NA 1

EcoTroph timedOut NA 1.6 ecoval success YES 1

EcoVirtual success YES 0.1 ecp success MAYBE 1.6.2 edcc success YES 1.0-0 edeR noExamples NA 1.0.0 edgeRun cantLoad NA 1.0.9

EDISON failure NA 1.1 editrules cantLoad NA 2.7.2

EDR success NO 0.6-5.1 edrGraphicalTools cantLoad NA 2.1 eegAnalysis cantLoad NA 0 eegkit cantLoad NA 1.0-1 eegkitdata noExamples NA 1 eeptools cantLoad NA 0.3.1

EFDR cantLoad NA 0.1.0 effects failure NA 3.0-3

EffectsRelBaseline success YES 0.5

EffectStars failure NA 1.5

EffectTreat success YES 0.1-1 effsize success YES 0.5.2 ega success NO 1.0.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 130

Matches Open- Package Package Name TERR Result Source R? Version egcm timedOut NA 1.0.2 eggCounts cantLoad NA 0.3 egonet cantLoad NA 1.2

EGRET fatalError NA 2.1.0 eha cantLoad NA 2.4-2 eHOF failure NA 1.5.7

EIAdata failure NA 0.0.2 eigeninv success NO 2011.8-1 eigenmodel success NO 1.01 eigenprcomp success YES 1

EILA failure NA 0.1-2 eiPack timedOut NA 0.1-7 eive success YES 2.1 eiwild noExamples NA 0.6.7

EL success YES 1 elastic noExamples NA 0.3.0 elasticnet success YES 1.1 elec success NO 0.1.2 elec.strat success NO 0.1.1

ElemStatLearn failure NA 2012.04-0 elliplot failure NA 1.1.1 ellipse failure NA 0.3-8 elliptic failure NA 1.3-5 elmNN success YES 1

EloRating success NO 0.43

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 131

Matches Open- Package Package Name TERR Result Source R? Version elrm success YES 1.2.2

ElstonStewart failure NA 1.1

ELT cantLoad NA 1.3

EMA cantLoad NA 1.4.4 embryogrowth cantLoad NA 5.1

EMC noExamples NA 1.3

EMCC noExamples NA 1.2

EMCluster success NO 0.2-4

EMD failure NA 1.5.7 emdatr failure NA 0.2 emdbook cantLoad NA 1.3.7 emdist timedOut NA 0.3-1

EMDomics cantLoad NA 0.99.0 emil failure NA 1.1-6

EMJumpDiffusion success YES 1.4.1 emma failure NA 0.1-0

EMMAgeo success YES 0.9.1 emme2 noExamples NA 0.9

EMMIXcontrasts success YES 1.0.0

EMMIXskew failure NA 1.0.1

EMMIXuskew success YES 0.11-6

EMMREML success YES 2 emoa cantLoad NA 0.5-0

EMP success MAYBE 2.0.1 empiricalFDR.DESeq2 cantLoad NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 132

Matches Open- Package Package Name TERR Result Source R? Version emplik cantLoad NA 1.1

EMT failure NA 1.1 emulator failure NA 1.2-15

EMVC success YES 0.1 enaR cantLoad NA 2.8.1 endogMNP noData NA 0.2-1 endorse success NO 1.4.1 energy cantLoad NA NA english success YES 1.0-1

EngrExpt failure NA 0.1-8 enigma noExamples NA 0.1.1

ENiRG failure NA 0.1

ENMeval failure NA 0.1.1

ENmisc success YES 1.2-7 enpls success YES 1

EnQuireR failure NA 0.1 enRich failure NA 2 enrichvs success NO 0.0.5

EnsembleBase cantLoad NA 0.7.1 ensembleBMA success NO 5.0.8

EnsembleCV cantLoad NA 0.7.1 ensembleMOS success NO 0.7

EnsemblePCReg cantLoad NA 0.6

EnsemblePenReg cantLoad NA 0.6 ensurer failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 133

Matches Open- Package Package Name TERR Result Source R? Version entropart failure NA 1.2.1 entropy success YES 1.2.1

EntropyEstimation success YES 1.2 enviPat success NO 1.9 enviPick cantLoad NA 1.3

EnviroStat failure NA 0.4-0

EnvNicheR success YES 1 epade failure NA 0.3.8

Epi failure NA 1.1.67 epi2loc success YES 1.0-1 epibasix failure NA 1.3 epicalc failure NA 2.15.1.0

EpiContactTrace failure NA 0.8.8

EpiDynamics failure NA 0.2

EpiEstim failure NA 1.1-2

EpiModel cantLoad NA 1.1.3 epinet success MAYBE 2.0.9 epiR failure NA 0.9-62 episplineDensity success YES 0.0-1 epitools failure NA 0.5-7

Eplot success YES 1 epoc cantLoad NA 0.2.5-1 epr success NO 2

EQL failure NA 1.0-0 eqs2lavaan cantLoad NA 3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 134

Matches Open- Package Package Name TERR Result Source R? Version eqtl cantLoad NA 1.1-7 equate failure NA 2.0-3 equateIRT failure NA 1.2 equivalence cantLoad NA 0.6.0 erboost success YES 1.2 erer failure NA 2.3 ergm cantLoad NA 3.2.4 ergm.count cantLoad NA 3.1.1 ergm.graphlets cantLoad NA 1.0.2 ergm.userterms cantLoad NA 3.1.1 ergmharris noData NA 1 eRm failure NA 0.15-5

ERP failure NA 1.0.1 erpR timedOut NA 0.2.0

ES success YES 1

ESEA cantLoad NA 1

ESG success NO 0.1

ESGtoolkit cantLoad NA 0.1 esotericR success YES 1

EstCRM cantLoad NA 1.3 estout noExamples NA 1.2

EstSimPDMP success YES 1.2 etable failure NA 1.2.0

ETAS failure NA 0.0-1 etasFLP cantLoad NA 1.2.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 135

Matches Open- Package Package Name TERR Result Source R? Version

ETC failure NA 1.3

ETLUtils success NO 1.2 etm cantLoad NA NA eulerian failure NA 1

EvalEst failure NA 2012.4-1 evaluate failure NA 0.5.5

Evapotranspiration success NO 1.5

EvCombR failure NA 0.1-2 evd cantLoad NA 1.1-1 evdbayes success YES 1.1-1 eVenn success YES 2.1.6 eventInterval success NO 1.2 events success NO 0.5 eventstudies success NO 1.1 evir failure NA 1.7-3 evmix success YES 2.4 evobiR failure NA 1 evolvability success YES 1 evora failure NA 1

EvoRAG success NO 2 evt0 failure NA 1.1-3 evtree failure NA 1.0-0

EWGoF failure NA 2

Exact success YES 1.4 exact2x2 failure NA 1.4.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 136

Matches Open- Package Package Name TERR Result Source R? Version exactci failure NA 1.3-0

ExactCIdiff success YES 1.3 exactLoglinTest cantLoad NA 1.4.2 exactmeta success NO 1.0-2

ExactPath success NO 1 exactRankTests cantLoad NA 0.8-27 exams fatalError NA 2.0-2

ExceedanceTools success YES 1.2.2 exCon success YES 0.1-3 excursions noData NA 1.1-20140610

ExomeDepth cantLoad NA 1.1.4 expands cantLoad NA 1.5

ExpDes failure NA 1.1.2

ExpDes.pt failure NA 1.1.2 expectreg failure NA 0.39 experiment noData NA 1.1-1 expert failure NA 1.0-0 expm cantLoad NA NA expoRkit success NO 0.9

ExPosition success NO 2.8.19 expoTree success MAYBE 1.0.1 expp cantLoad NA 1.1 expsmooth success YES 2.02 exptest success YES 1.2 exsic failure NA 1.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 137

Matches Open- Package Package Name TERR Result Source R? Version

ExtDist cantLoad NA 0.3.7

extfunnel success YES 1.3

extlasso success YES 0.2

extraBinomial success NO 2.1

extracat cantLoad NA 1.7-1

extrafont cantLoad NA 0.17

extrafontdb noData NA 1

extraTrees cantLoad NA 1.0.5

ExtremeBounds success MAYBE 0.1.4.2

extRemes cantLoad NA NA

extremevalues cantLoad NA 2.3.0

extWeibQuant success YES 1.1

eyetracking success YES 1.1

ez cantLoad NA 4.2-2

ezglm success NO 1

ezsim cantLoad NA 0.5.5

F / Package Compatibility Details CRAN packages with names beginning with F tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

FacPad success YES 3

FactMixtAnalysis success YES 1

FactoClass failure NA 1.1.1

FactoMineR timedOut NA 1.28

factorplot success YES 1.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 138

Matches Open- Package Package Name TERR Result Source R? Version factorQR noData NA 0.1-4

FACTscorer failure NA 0.1.0 factualR noExamples NA 0.5

FADA cantLoad NA 1.2

FAdist success YES 2

Fahrmeir success NO 2012.04-0 fail success YES 1.2

FAiR cantLoad NA 0.4-15 falcon success YES 0.1 falsy failure NA 1 fame success YES 2.18

Familias failure NA 2.1

FAMILY failure NA 0.1.18

FAmle success NO 1.3.2

FAMT failure NA 2.5 fanc timedOut NA 1.13 fANCOVA failure NA 0.5-1 fanovaGraph cantLoad NA 1.4.7 fanplot failure NA 3.3

FAOSTAT cantLoad NA 1.9 faoutlier noExamples NA 0.4 far timedOut NA 0.6-4 faraway success NO 1.0.6 fArma timedOut NA 3010.79 farsi success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 139

Matches Open- Package Package Name TERR Result Source R? Version fAsianOptions failure NA 3010.79 fAssets cantLoad NA 3011.83 fast success NO 0.63 fastclime cantLoad NA 1.2.4 fastcluster cantLoad NA NA fastcox timedOut NA 1.1.1 fastGHQuad success YES 0.2

FastHCS cantLoad NA 0.0.4 fastHICA cantLoad NA 1 fastICA success YES 1.2-0

FastImputation success MAYBE 1.2 fastM success NO 0.0-2 fastmatch cantLoad NA 1.0-4

FastPCS cantLoad NA 0.1.2 fastR cantLoad NA 0.8-1

FastRCS cantLoad NA 0.0.6

FastRWeb success YES 1.1-0 fastSOM success YES 0.9 fat2Lpoly success YES 1.1.1

FatTailsR failure NA 1.0-3

FAwR success NO 1.0.1 fBasics failure NA 3011.87 fbati success NO 1.0-1

FBFsearch success YES 1

FBN success YES 1.5.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 140

Matches Open- Package Package Name TERR Result Source R? Version fBonds success NO 3010.77 fbRanks cantLoad NA 2 fcd success MAYBE 0.1 fCertificates success YES 0.5-3 fclust success NO 1.0.1 fCopulae failure NA 3011.81 fcros failure NA 1.3

FD cantLoad NA 1.0-12 fda timedOut NA 2.4.3 fda.usc failure NA 1.2.1 fdakma success YES 1.1.1 fdaMixed failure NA 0.4 fdasrvf failure NA 1.4.2 fdatest success YES 2

FDboost failure NA 0.0-5

FDGcopulas success NO 1 fdrci failure NA 2

FDRreg success MAYBE 0.1 fdrtool cantLoad NA NA fds cantLoad NA 1.7 fdth success MAYBE 1.1-8

FeaLect cantLoad NA 1.7 feature cantLoad NA 1.2.11

FeatureHashing failure NA 0.8 features failure NA 2011.8-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 141

Matches Open- Package Package Name TERR Result Source R? Version fechner success YES 1.0-2 federalregister cantLoad NA 0.1.2

FeedbackTS cantLoad NA 1.3.1 fExoticOptions failure NA 2152.78 fExpressCertificates failure NA 1.2 fExtremes failure NA 3010.81 ff cantLoad NA NA ffbase cantLoad NA 0.11.3

FFD success NO 1.0-2

FField success YES 0.1.0 ffmanova success NO 0.2-2 fftw failure NA 1.0-3 fftwtools success NO 0.9-6 fgac noExamples NA 0.6-1

FGalgorithm success MAYBE 1 fGarch failure NA 3010.82

FGN failure NA 2.0-12 fgof success YES 0.2-1

FGSG success YES 1 fgui noExamples NA 1.0-5

FHtest success NO 1.1

FI success YES 1 fICA success MAYBE 1.0-2 fields cantLoad NA NA

FieldSim cantLoad NA 3.1.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 142

Matches Open- Package Package Name TERR Result Source R? Version fifer failure NA 1 filehash cantLoad NA 2.2-2 filehashSQLite cantLoad NA 0.2-4 filenamer failure NA 0.2 fImport noData NA 3000.82 financial success YES 0.2

FinancialInstrument failure NA 1.2.0

FinAsym failure NA 1

FinCal success YES 0.6

FindAllRoots success YES 1

FindIt cantLoad NA 0.3

FindMinIC success NO 1.6 findpython failure NA 1.0.1 fingerprint success NO 3.5.2 finiteruinprob success YES 0.4

FinTS failure NA 0.4-5

FisherEM failure NA 1.4 fisheyeR failure NA 0.9

FisHiCal timedOut NA 1.1 fishmethods failure NA 1.7-0 fishMod failure NA 0.25 fishmove cantLoad NA 0.2-1 fit.models failure NA 0.5-10 fit4NM cantLoad NA 3.3.3

FitAR failure NA 1.94

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 143

Matches Open- Package Package Name TERR Result Source R? Version

FitARMA success YES 1.6 fitdistrplus timedOut NA 1.0-3 fitDRC success MAYBE 1.1

FITSio success NO 2.0-0 fitTetra failure NA 1

FKF cantLoad NA NA flam success MAYBE 1 flare cantLoad NA 1.5.0 flashClust success YES 1.01-2 flexclust failure NA 1.3-4 flexCWM success NO 1.3 flexmix timedOut NA 2.3-12

FlexParamCurve failure NA 1.4-3 flexsurv failure NA 0.5

FLIM success MAYBE 1.2 flip cantLoad NA 2.4.3

FLLat success MAYBE 1.1 flora cantLoad NA 0.2.3 flower failure NA 1 flowfield failure NA 1

FLR success NO 1 flsa failure NA 1.05

FLSSS success YES 3.1

FluOMatic success NO 1

Flury success YES 0.1-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 144

Matches Open- Package Package Name TERR Result Source R? Version flux failure NA 0.3-0 fma failure NA 2.01

FME failure NA 1.3.2 fmri success YES 1.5-1 fmsb failure NA 0.5.1

FMStable failure NA 0.1-2 fmt noData NA 1 fMultivar failure NA 3011.78

FNN success YES 1.1 fNonlinear failure NA 3010.78 foba success YES 0.1 fontcm noData NA 1.1 foodweb cantLoad NA 36526 fOptions failure NA 3010.83 forams success NO 2.0-4 foreach failure NA 1.4.2

ForeCA timedOut NA 0.1 forecast failure NA 5.8 foreign cantLoad NA NA forensic success YES 0.2 forensim cantLoad NA 4.3 forestplot failure NA 1

ForImp cantLoad NA 1.0.3

ForIT failure NA 1

FormalSeries success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 145

Matches Open- Package Package Name TERR Result Source R? Version formatR failure NA 1

Formula failure NA 1.2-0 formula.tools success YES 1.3.4 fortunes failure NA 1.5-2 forward success NO 1.0.3

ForwardSearch cantLoad NA 1 fossil cantLoad NA 0.3.7

FourScores noData NA 1 fpc cantLoad NA 2.1-9 fpca success NO 0.2-1

FPDclustering success YES 1 fPortfolio cantLoad NA 3011.81 fpow noData NA 0.0-2 fpp success NO 0.5 fptdApprox timedOut NA 2 fracdiff cantLoad NA NA fractal timedOut NA 2.0-0 fractaldim failure NA 0.8-4 fractalrock timedOut NA 1.1.0

FRACTION success YES 1 frailtyHL success YES 1.1 frailtypack timedOut NA 2.7.2 frair cantLoad NA 0.4

Frames2 failure NA 0.1.0

FRAPO success NO 0.3-8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 146

Matches Open- Package Package Name TERR Result Source R? Version

FRB cantLoad NA 1.8 frbs timedOut NA 2.2-0

FRCC success YES 1 freeknotsplines success YES 1

FreeSortR cantLoad NA 1.1 freestats success YES 0.0.3 fRegression failure NA 3011.81

FREQ success YES 1 freqMAP failure NA 0.2 freqparcoord success NO 1.0.0 freqweights cantLoad NA 1.0.1

FRESA.CAD cantLoad NA 1

FrF2 timedOut NA 1.7-1

FrF2.catlg128 success MAYBE 1.2-1 frm noExamples NA 1.2 frmhet noExamples NA 1 frmqa timedOut NA 0.1-5 frontier cantLoad NA 1.1-0 frontiles cantLoad NA 1.2 frt success YES 0.1 fscaret cantLoad NA 0.9

FSelector cantLoad NA 0.2 fsia success YES 1 fslr cantLoad NA 1.3 fso cantLoad NA 2.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 147

Matches Open- Package Package Name TERR Result Source R? Version fSRM cantLoad NA 0.6.1

FTICRMS noData NA 0.8 ftnonpar failure NA 0.1-88 fTrading failure NA 3010.78 fts success YES 0.9.9 ftsa cantLoad NA 4.1 fueleconomy success YES 0.1 fugeR noExamples NA 0.1.2 fun timedOut NA 0.1-0

FunChisq success YES 1

FunCluster cantLoad NA 1.09

Funclustering success YES 1.0.1

FuncMap cantLoad NA 1.0-3 functional failure NA 0.6

FunctionalNetworks cantLoad NA 1.0.0 funFEM failure NA 1 funHDDC success NO 1 fUnitRoots failure NA 3010.78 funreg success NO 1.1 funtimes success YES 1

FusedPCA timedOut NA 0.2 futile.any success YES 1.3.0 futile.logger success NO 1.3.7 futile.matrix success NO 1.2.2 futile.options success YES 1.0.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 148

Matches Open- Package Package Name TERR Result Source R? Version

futile.paradigm success YES 2.0.4

fuzzyFDR success YES 1

fuzzyMM timedOut NA 1.0.1

FuzzyNumbers failure NA 0.3-5

fuzzyRankTests success NO 0.3-5

FuzzyStatProb failure NA 1

FuzzyToolkitUoN success YES 1

fwdmsa failure NA 0.2

FWDselect success NO 1.1

fwi.fbp success NO 1.5

fwsim cantLoad NA 0.3.2

fxregime failure NA 1.0-3

G / Package Compatibility Details CRAN packages with names beginning with G tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

g.data timedOut NA 2.4

G1DBN timedOut NA 3.1.1

G2Sd cantLoad NA 2.1.2

GA success NO 2.2

GA4Stratification success YES 1

GABi success YES 0.1

GAD cantLoad NA 1.1.1

gains success YES 1.1

GAIPE success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 149

Matches Open- Package Package Name TERR Result Source R? Version galts failure NA 1.3 gam cantLoad NA NA gamair success YES 0.0-8 gambin success YES 1.1

GAMBoost failure NA 1.2-3 gamboostLSS failure NA 1.1-3 gamboostMSM noExamples NA 1.1.87 gamclass success MAYBE 0.55 games success NO 1.1-1 gamlr success NO 1.12-1 gamlss failure NA 4.3-1 gamlss.add success MAYBE 4.3-0 gamlss.cens failure NA 4.2.7 gamlss.data success MAYBE 4.2-7 gamlss.demo success MAYBE 4.2-7 gamlss.dist failure NA 4.3-1 gamlss.mx success MAYBE 4.2-7 gamlss.nl failure NA 4.1-0 gamlss.spatial cantLoad NA 0.1 gamlss.tr failure NA 4.2-7 gamlss.util failure NA 4.2-7 gamm4 failure NA 0.2-3

Gammareg failure NA 1 gammSlice success NO 1.3

GANPA noExamples NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 150

Matches Open- Package Package Name TERR Result Source R? Version

GANPAdata success YES 1 gaoptim success YES 1.1 gap failure NA 1.1-12 gapmap cantLoad NA 0.0.2 gaussDiff success YES 1.1 gaussquad success NO 1.0-2 gb success YES 1.1.8-8

GB2 failure NA 1.2 gbm timedOut NA 2.1 gbRd failure NA 0.4-11 gbs failure NA 1

GCAI.bias failure NA 1 gCat success YES 0.1

GCD cantLoad NA 3.0.4 gcdnet success NO 1.0.4 gclus failure NA 1.3.1 gcmr failure NA 0.6.1 gconcord success YES 0.41 gcookbook noData NA 1

GCPM success YES 1.1.1 gdalUtils success YES 0.3.1 gdata timedOut NA 2.13.3

GDAtools cantLoad NA 1.3

GDELTtools failure NA 1.2 gdimap cantLoad NA 0.1-9

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 151

Matches Open- Package Package Name TERR Result Source R? Version gdistance cantLoad NA 1.1-6 gee failure NA 4.13-18 geeM success NO 0.7.2 geepack timedOut NA 1.2-0 geesmv failure NA 1 geigen failure NA 1.4 geiger cantLoad NA 2.0.3 gems cantLoad NA 0.9.5 gemtc cantLoad NA 0.6-1 gemtc.jar noData NA 0.14.3

GenABEL cantLoad NA 1.0.0

GenABEL.data success YES 1.0.0 genalg success YES 0.1.1.1 genasis failure NA 1

GenBinomApps success YES 1.0-2 gendata success NO 1 gender cantLoad NA 0.4.3

GENEAread failure NA 1.1.1

GeneCycle failure NA 1.1.2

GeneF success YES 1

GeneFeST noExamples NA 1.0.1

Geneland cantLoad NA 4.0.5 geneListPie success YES 1

GeneNet timedOut NA 1.2.11 genepi cantLoad NA 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 152

Matches Open- Package Package Name TERR Result Source R? Version

GeneralizedHyperbolic failure NA 0.8-1

GeneReg noData NA 1.1.2 geneSignatureFinder cantLoad NA 2014.02.17 genetics success NO 1.3.8.1

GeneticSubsetter success NO 0.5

GeneticTools cantLoad NA 0.3

GenKern success YES 1.2-60 genlasso cantLoad NA 1.3

GENLIB timedOut NA 1.0.2 genMOSS success NO 1.2 genMOSSplus noData NA 1 genoPlotR failure NA 0.8.2

GenOrd success NO 1.2.0 genpathmox failure NA 0.2 genridge failure NA 0.6-5

GenSA failure NA 1.1.4 gensemble success YES 1 genSurv success YES 1.0.2

GenWin success YES 0.1 geoBayes failure NA 0.1.3 geocodeHERE failure NA 0.1.1 geoCount noData NA 1.131209

GeoDE failure NA 1

GeoGenetix cantLoad NA 0.0.2

GeoLight failure NA 1.03

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 153

Matches Open- Package Package Name TERR Result Source R? Version

GEOmap failure NA 2.2-2 geomapdata noExamples NA 1.0-4 geometry cantLoad NA 0.3-5 geomorph cantLoad NA 2.1.2 geonames noExamples NA 0.998 geophys failure NA 1.3-6 geoR cantLoad NA 1.7-4.1 geoRglm cantLoad NA 0.9-4 georob cantLoad NA 0.1-5 geoscale success NO 1.1 geospacom cantLoad NA 0.5-7 geosphere success MAYBE 1.3-11 geospt cantLoad NA 1.0-0 geostatsp cantLoad NA 1.1.9 geotools success YES 0.1 geotopbricks failure NA 1.3.5.4

GeoXp cantLoad NA 1.6.2 geozoo success NO 0.4.3

GESTr failure NA 0.1 getopt success YES 1.20.0

GetoptLong timedOut NA 0.0.8

GetR failure NA 0.1 gets success MAYBE 0.2 gettingtothebottom failure NA 3.2

GEVcdn success YES 1.1.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 154

Matches Open- Package Package Name TERR Result Source R? Version

GEVStableGarch cantLoad NA 1

GExMap noData NA 1.1.3 gfcanalysis cantLoad NA 1.2

GGally cantLoad NA 0.5.0 ggdendro failure NA 0.1-15

GGEBiplotGUI cantLoad NA 1.0-8 ggHorizon success YES 0.1

GGIR success NO 1.1-4 gglasso success MAYBE 1.3 ggm cantLoad NA 2.3 ggmap failure NA 2.3 ggmcmc timedOut NA 0.6

GGMselect cantLoad NA 0.1-9 ggparallel success YES 0.1.1 cantLoad NA 1.0.0 ggRandomForests failure NA 1.1.3 ggROC failure NA 1 ggsubplot cantLoad NA 0.3.2 ggswissmaps cantLoad NA 0.0.2 ggtern cantLoad NA 1.0.3.2 ggthemes cantLoad NA 2.1.0 ggvis cantLoad NA 0.4

GhcnDaily success YES 1.5

GHQp failure NA 1 ghyp failure NA 1.5.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 155

Matches Open- Package Package Name TERR Result Source R? Version gibbs.met success YES 1.1-3

GibbsACOV success YES 1.1

GIGrvg failure NA 0.3

GillespieSSA success YES 0.5-4 gimme cantLoad NA 0.1-1 gIPFrm success YES 2 giRaph failure NA 0.1.2

GISTools cantLoad NA 0.7-4 gistr noExamples NA 0.1.0 gitter cantLoad NA 1.0.4

Giza success NO 1 glarma fatalError NA 1.3-0 glasso success YES 1.8 glassomix failure NA 1.2 glcm failure NA 1.2 gld cantLoad NA 2.2.1

GLDEX success YES 2.0.0.2 gldist failure NA 2160.2

GLDreg cantLoad NA 1.0.1 glinternet success YES 0.9.0 gllm failure NA 0.35 glm2 failure NA 1.1.2 glmc failure NA 0.2-4 glmdm noExamples NA 2.6 glmlep success YES 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 156

Matches Open- Package Package Name TERR Result Source R? Version glmmBUGS success NO 2.3 glmmGS failure NA 0.5-1 glmmLasso failure NA 1.3.3 glmmML cantLoad NA 1 glmnet cantLoad NA 1.0.2 glmnetcr failure NA 1.0.2 glmpath success NO 0.97 glmpathcr success NO 1.0.3 glmulti cantLoad NA 1.0.7 glmvsd cantLoad NA 1.1 glmx failure NA 0.1-0 globalboosttest success NO 1.1-0

GlobalDeviance noExamples NA 0.4 globalGSA success YES 1

GlobalOptions timedOut NA 0.0.5 globalOptTests success YES 1.1 glogis failure NA 1.0-0 glpkAPI cantLoad NA 1.3.0 glrt success YES 2

GLSME success YES 1.0.2 gmailr cantLoad NA 0.6.0

GMCM failure NA 1.1.1 gMCP cantLoad NA 0.8-8

GMD failure NA 0.3.3

GMDH success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 157

Matches Open- Package Package Name TERR Result Source R? Version

Gmisc cantLoad NA 1 gmm failure NA 1.5-0

GMMBoost timedOut NA 1.1.2 gmodels success NO 2.15.4.1 gmp cantLoad NA NA gmt success YES 1.2-0 gMWT cantLoad NA 0.9

GNE failure NA 0.99-0 gnm failure NA 1.0-7 gnmf success YES 0.7 gnumeric noExamples NA 0.7-2 goalprog success NO 1.0-2 gof failure NA 0.9.1

GoFKernel failure NA 2.0-5 goft success YES 1 goftest success YES 1.0-2

GOGANPA failure NA 1 gogarch success NO 0.7-2 googleVis failure NA 0.5.8 gooJSON success YES 1.0.01 goric success MAYBE 0.0-8 govStatJPN noExamples NA 0.1 gpairs failure NA 1.2

GPareto cantLoad NA 1.0.0

GPArotation failure NA 2014.11-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 158

Matches Open- Package Package Name TERR Result Source R? Version

GPC cantLoad NA 0.1 gPCA success NO 1

GPCSIV failure NA 0.1.0 gPdtest success YES 0.4

GPFDA failure NA 2.2

GPfit success YES 0.2-1 gpk success NO 1 gplm failure NA 0.7-2 gplots cantLoad NA 2.16.0

GPLTR timedOut NA 1.1 gpmap failure NA 0.1.1 gpr success YES 1.1 gProfileR failure NA 0.5

GPseq success YES 0.5 gptk cantLoad NA 1.08

GPvam success YES 3.0-2 grade success NO 0.2-1

GRaF failure NA 0.1-12 gRain cantLoad NA 1.2-3 gramEvol failure NA 1.2-1

GrammR cantLoad NA 1.0.1 granova failure NA 2.1 granovaGG cantLoad NA 1.3 gRapfa cantLoad NA 1 gRapHD failure NA 0.2.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 159

Matches Open- Package Package Name TERR Result Source R? Version

GrapheR noExamples NA 1.9-84 graphicsQC failure NA 1.0-6

GraphPCA failure NA 1

GrassmannOptim success NO 2 gRbase cantLoad NA 1.7-0.1 gRc failure NA 0.4-1 greport cantLoad NA 0.5-2

Grid2Polygons failure NA 0.1-4 gridBase failure NA 0.4-7 gridDebug failure NA 0.4-0 gridExtra failure NA 0.9.1 gridGraphics failure NA 0.1-2 gridGraphviz failure NA 0.1 gridSVG failure NA 1.4-3

GriegSmith failure NA 1 gRim cantLoad NA 0.1-17 grImport failure NA 0.9-0 grnn success YES 0.1.0 groc cantLoad NA 1.0.4 grofit failure NA 1.1.1-1 grouped success NO 0.6-0

GroupSeq noExamples NA 1.3.2 growcurves cantLoad NA 0.2.3.9 growfunctions cantLoad NA 0.11 growthmodels success YES 1.2.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 160

Matches Open- Package Package Name TERR Result Source R? Version growthrate success YES 1.3 grplasso timedOut NA 0.4-5 grppenalty success YES 2.1-0 grpreg success NO 2.8-0 grt cantLoad NA 0.2

GRTo success YES 1.2

GSA success YES 1.03

GSAgm failure NA 1 gsalib success YES 2.1 gsarima failure NA 0.1-4 gsbDesign failure NA 0.96-2 gsDesign cantLoad NA 2.9-3

GSE cantLoad NA NA gSeg failure NA 0.1 gset success YES 1.1.0 gsg failure NA 2

GSIF cantLoad NA 0.4-3 gskat cantLoad NA 1 gsl cantLoad NA NA

GSM failure NA 1.3.1 gsmoothr success YES 0.1.7 gss failure NA 2.1-4 gsscopu failure NA 0.9-2 gstat cantLoad NA NA gstudio cantLoad NA 1.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 161

Matches Open- Package Package Name TERR Result Source R? Version gsubfn failure NA 0.6-6 gsw success YES 1.0-3 gtable failure NA 0.1.2 gtcorr success YES 0.2-1 gte success YES 1.2-1 gtools cantLoad NA NA gtx success NO 0.0.8

GuardianR success YES 0.5

Guerry failure NA 1.6-1

GUIDE noExamples NA 1.0.9

GUILDS failure NA 1.2

GUIProfiler failure NA 0.1.2 gumbel success MAYBE 1.05

GUniFrac success YES 1

GUTS failure NA 0.3.5 gvcm.cat failure NA 1.7 gvlma timedOut NA 1.0.0.2

GWAF noExamples NA 2.1

GWASExactHW failure NA 1.01 gwerAM success YES 1

GWG success YES 1 gWidgets failure NA 0.0-54 gWidgets2 cantLoad NA 1.0-5 gWidgets2RGtk2 cantLoad NA 1.0-2 gWidgets2tcltk cantLoad NA 1.0-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 162

Matches Open- Package Package Name TERR Result Source R? Version

gWidgetsRGtk2 cantLoad NA 0.0-83

gWidgetstcltk cantLoad NA 0.0-55

GWmodel cantLoad NA 1.2-3

GWRM failure NA 1.1

gwrr cantLoad NA 0.2-1

GWsignif success YES 1

GxM success YES 1.1

H / Package Compatibility Details CRAN packages with names beginning with H tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

h2o cantLoad NA 2.8.1.1

haarfisz success YES 4.5

HAC cantLoad NA 1.0-1

HadoopStreaming failure NA 0.2

hamlet failure NA 0.7

HandTill2001 failure NA 0.2-9

Hankel success YES 0.0-1

HAP.ROR success NO 1

hapassoc success NO 1.2-7

HapEstXXR failure NA 0.1-7

HAPim failure NA 1.3

Haplin noExamples NA 5.3

haplo.ccs timedOut NA 1.3.1

haplo.stats timedOut NA 1.6.11

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 163

Matches Open- Package Package Name TERR Result Source R? Version

HaploSim failure NA 1.8.4 hapsim failure NA 0.3

HardyWeinberg failure NA 1.5.4 harvestr cantLoad NA 0.6.0 hash timedOut NA 2.2.6 hashFunction noData NA 1 hasseDiagram cantLoad NA 0.1.1 hawkes success YES 0.0-4 hazus success YES 0.1 hbim failure NA 1.0.3 hbmem failure NA 0.3 hbsae failure NA 1

HBSTM noExamples NA 1.0.1 hcc failure NA 0.54 hcci success NO 1.0.0 hcp success YES 0.1 hda cantLoad NA 0.2-12

HDclassif timedOut NA 1.2.2 hddplot failure NA 0.56 hddtools cantLoad NA 0.2.4 hdeco success NO 0.4.1 hdi cantLoad NA 0.1-2 hdlm cantLoad NA 1.2

HDMD failure NA 1.2

HDPenReg success YES 0.9

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 164

Matches Open- Package Package Name TERR Result Source R? Version hdrcde cantLoad NA NA

HDtweedie success MAYBE 1.1

HEAT success NO 1.2 heatex success YES 1 heatmap.plus success YES 1.3 heatmap3 failure NA 1.0.7 heatmapFit noExamples NA 2.0.2 heavy cantLoad NA 0.2-35 helloJavaWorld cantLoad NA 0.0-9 helsinki cantLoad NA 0.9.24 heplots failure NA 1.0-12 hergm cantLoad NA 2.1-1 heritability failure NA 1 hermite success YES 1.0.1 het.test success YES 0.1 hett failure NA 0.3-1 hexbin cantLoad NA NA hexView success YES 0.3-3 hflights success YES 0.1 hgam failure NA 0.1-2 hglasso cantLoad NA 1.2 hglm failure NA 2.0-11 hglm.data noData NA 1.0-0

HGNChelper success YES 0.3.1

HH cantLoad NA 3.1-14

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 165

Matches Open- Package Package Name TERR Result Source R? Version

HHG cantLoad NA 1.4 hht failure NA 2.1.2

HI success YES 0.4

HiClimR success MAYBE 1.1.5

HiCseg success NO 1.1 hiddenf failure NA 1.1

HiddenMarkov failure NA 1.8-1

HiDimDA failure NA 0.2-2

HiDimMaxStable cantLoad NA 0.1.1 hier.part cantLoad NA 1.0-4 hierarchicalDS cantLoad NA 2.9 hierfstat cantLoad NA 0.04-14 hierNet success YES 1.6

HierO cantLoad NA 0.2

HIest failure NA 2 highD2pop cantLoad NA 1 highfrequency timedOut NA 0.4 highlight success YES 0.4.4 highr failure NA 0.4 highTtest success YES 1 hillmakeR success YES 0.2

HiLMM success YES 1 hint success YES 0.1-1 hiPOD cantLoad NA 1 hisemi failure NA 1.0-319

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 166

Matches Open- Package Package Name TERR Result Source R? Version

HistData failure NA 0.7-5 histogram failure NA 0.0-23

HistogramTools cantLoad NA 0.3.1 historydata success YES 0.1 hitandrun failure NA 0.5

HIV.LifeTables success YES 0.1 hive cantLoad NA 0.1-16

HiveR noData NA 0.2-27

HK80 success YES 0.0.1

HLMdiag cantLoad NA 0.2.5 hlr failure NA 0.0-4

HLSM failure NA 0.4 hmeasure failure NA 1

Hmisc cantLoad NA 3.14-6

HMM success YES 1 hmm.discnp success YES 0.2-3

HMMCont success NO 1 hmmm failure NA 1.0-3

HMMpa success YES 1

HMP failure NA 1.3.1

HMPTrees failure NA 1.2

HMR noExamples NA 0.3.2 hnp success NO 1 hoardeR noExamples NA 0.0-2 holdem success NO 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 167

Matches Open- Package Package Name TERR Result Source R? Version

Holidays timedOut NA 1.0-0 homals cantLoad NA 1.0-5 homeR success YES 0.1

HomoPolymer cantLoad NA 1 homtest success NO 1.0-5 hot.deck failure NA 1

HotDeckImputation success YES 1.0.0

Hotelling success NO 1.0-2 hotspots success YES 1.0.2 howmany success NO 0.3-1

HPbayes success YES 0.1 hpcwld success YES 0.4 hpoPlot cantLoad NA 2 hqmisc success YES 0.1-1 hrr success YES 1.1.1

HSAUR timedOut NA 1.3-6

HSAUR2 timedOut NA 1.1-13

HSAUR3 timedOut NA 1.0-3 hSDM noExamples NA 1.4 hsicCCA success YES 1 hsmm failure NA 0.4 hsphase timedOut NA 2.0.1

HSROC failure NA 2.1.7

HSSVD success YES 1.2 htmltab failure NA 0.5.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 168

Matches Open- Package Package Name TERR Result Source R? Version htmlTable failure NA 1 htmltools cantLoad NA 0.2.6

HTMLUtils noData NA 0.1.6 htmlwidgets cantLoad NA 0.3.2 hts failure NA 4.4

HTSCluster failure NA 2.0.4 httpRequest failure NA 0.0.10 httpuv cantLoad NA NA httr failure NA 0.5 huge cantLoad NA 1.2.6

HUM cantLoad NA 1 humanFormat success YES 1

HW.pval success YES 1 hwde success NO 0.64

HWEBayes failure NA 1.4

HWEintrinsic success NO 1.2.1 hwriter failure NA 1.3.2 hwriterPlus timedOut NA 1.0-3 hwwntest failure NA 1.3

HWxtest success YES 1.0.5 hybridEnsemble cantLoad NA 0.1.1 hybridHclust success NO 1.0-4

HybridMC success YES 0.2 hydroApps success YES 0.1-1 hydrogeo failure NA 0.2-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 169

Matches Open- Package Package Name TERR Result Source R? Version

hydroGOF cantLoad NA 0.3-8

HydroMe timedOut NA 2

hydroPSO success YES 0.3-4

hydrostats failure NA 0.2.3

hydroTSM cantLoad NA 0.4-2-1

HyperbolicDist failure NA 0.6-2

hyperdirichlet cantLoad NA 1.4-9

hypergea success YES 1.2.3

hypergeo failure NA 1.2-9

hyperSpec failure NA 0.98-20140523

hypervolume cantLoad NA 1.1.2

HyPhy failure NA 1

hypothesestest failure NA 1

hypred success NO 0.5

hysteresis cantLoad NA 2.5

hzar failure NA 0.2-5

I / Package Compatibility Details CRAN packages with names beginning with I tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

IASD failure NA 1.0.7

IAT cantLoad NA 0.2

iBATCGH cantLoad NA 1.1

ibd failure NA 1.2

IBDhaploRtools success YES 1.7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 170

Matches Open- Package Package Name TERR Result Source R? Version ibdreg failure NA 0.2.5

IBDsim failure NA 0.9-4 ibeemd cantLoad NA 1.0.1 ibelief success YES 1

IBHM cantLoad NA 1.1-11 ibmdbR failure NA 1.34.3

Iboot success YES 0.1-1 ibr success YES 1.4.5

IBrokers cantLoad NA 0.9-12 iBUGS success MAYBE 0.1.4 ic.infer failure NA 1.1-5 iC10 success NO 1.1.2 iC10TrainingData success NO 1.0.1

IC2 success YES 1.0-1 ic50 failure NA 1.4.2 ica success YES 1.0-0 icamix success NO 1.0.1 icaOcularCorrection failure NA 3.0.0 icapca success NO 1.1

ICC failure NA 2.2.1 iccbeta noExamples NA 1 icd9 failure NA 0.5

ICE success YES 0.69

ICEbox noExamples NA 1

ICEinfer success NO 1.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 171

Matches Open- Package Package Name TERR Result Source R? Version icensmis success NO 1.2.1

ICGE success YES 0.3 iCluster failure NA 2.1.0

ICS failure NA 1.2-4

ICSNP success YES 1.0-9

ICsurv success YES 1 idbg success YES 1 identity success YES 0.2-1

IDPmisc failure NA 1.1.17

IDPSurvival cantLoad NA 1 idr success NO 1.2 iDynoR noExamples NA 1 iFad cantLoad NA 3

IFP success YES 0.1.1 ifs cantLoad NA 0.1.4 ifultools cantLoad NA NA iGasso cantLoad NA 1.2

IgorR failure NA 0.7.1 igraph cantLoad NA NA igraphdata noData NA 0.2 igraphtosonia cantLoad NA 1 iki.dataclim cantLoad NA 1 ilc cantLoad NA 1

IM success MAYBE 1

Imap noExamples NA 1.32

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 172

Matches Open- Package Package Name TERR Result Source R? Version imguR cantLoad NA 1.0.0

IMIS success YES 0.1

ImpactIV failure NA 1 imprProbEst failure NA 1.0.1 imputeLCMD failure NA 2 imputeMDR success YES 1.1.2 imputeR timedOut NA 1.0.0 imputeYn failure NA 1.2 in2extRemes success YES 1.0-1 inarmix failure NA 0.4 incReg success NO 1

IndependenceTests failure NA 0.2 indicoio failure NA 0.3 indicspecies cantLoad NA 1.7.4 ineq success YES 0.2-13

InfDim success NO 1 inference timedOut NA 0.1.0

InferenceSMR success NO 1 inflection success YES 1.1 influence.ME failure NA 0.9-5 influence.SEM cantLoad NA 1.4 infoDecompuTE success YES 0.5.1 informR failure NA 1.0.04 infotheo success NO 1.2.0 infutil cantLoad NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 173

Matches Open- Package Package Name TERR Result Source R? Version

INLABMA noData NA 0.1-5 inline failure NA 0.3.13 inlinedocs failure NA 2013.9.3

InPosition success NO 0.12.7 insideRODE failure NA 2 insol failure NA 1.1.1 insuranceData success YES 1 intamap cantLoad NA 1.3-37 intamapInteractive cantLoad NA 1.1-10 intcox success NO 0.9.3 integrOmics noData NA 2.55

Interact success YES 1.1

InteractiveIGraph timedOut NA 1.0.6.1 interAdapt cantLoad NA 0.1 interferenceCI success YES 1.1 intergraph failure NA 2.0-1

Interpol success YES 1.3.1

Interpol.T failure NA 2.1.1 interpretR failure NA 0.2.0

InterVA4 success NO 1.5 interval failure NA 1.1-0.1 intervals cantLoad NA NA interventionalDBN success NO 1.2.2

IntLik success YES 1 intpoint success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 174

Matches Open- Package Package Name TERR Result Source R? Version inTrees success YES 1.1 intReg failure NA 0.2-8 intRegGOF success YES 0.85-1 introgress success YES 1.2.3 intsvy cantLoad NA 1.6

InvariantCausalPrediction cantLoad NA 0.1-4

InventorymodelPackage success YES 1.0.2 investr failure NA 1.2.1 invGauss cantLoad NA 1.1 io failure NA 0.2.2 ionflows cantLoad NA 1.1 iosmooth failure NA 0.91 ipdmeta success NO 2.4 ipdw cantLoad NA 0.2-1 ipfp success YES 1 iplots cantLoad NA 1.1-7

IPMpack failure NA 2.1 ipred cantLoad NA 0.9-3 ips failure NA 0.0-7

IPSUR timedOut NA 1.5

IQCC failure NA 0.6 iqLearn failure NA 1.2 irace success YES 1.06 iRefR failure NA 1.13 iRegression success YES 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 175

Matches Open- Package Package Name TERR Result Source R? Version iRepro failure NA 1 irlba success YES 1.0.3 irr success YES 0.84 irtoys cantLoad NA 0.1.7 irtProb failure NA 1.2 irtrees success NO 0.1.0

IRTShiny cantLoad NA 1 isa2 failure NA 0.3.3

ISBF success YES 0.2.1

ISDA.R failure NA 1 isdals failure NA 2.0-4

IsingFit cantLoad NA 0.3.0 isingLenzMC success NO 0.2.1

IsingSampler success YES 0.1.1

ISLR success NO 1 ismev failure NA 1.4

Iso cantLoad NA NA

IsoCI failure NA 1.1 isocir failure NA 1.1-3

ISOcodes success YES 2014.03.24

IsoGene cantLoad NA 1.0-23 isopam success NO 0.9-13 isopat success YES 1

ISOpureR success NO 1.0.8 isotone success YES 1.0-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 176

Matches Open- Package Package Name TERR Result Source R? Version isotonic.pen success YES 1

IsotopeR noExamples NA 0.4.7

ISOweek failure NA 0.6-2 isva success YES 1.8

ISwR timedOut NA 2.0-6 iteRates failure NA 3.1 iterators failure NA 1.0.7 iterLap failure NA 1.1-2 iterpc failure NA 0.2.6 itertools failure NA 0.1-3 itertools2 timedOut NA 0.1.1 itree timedOut NA 0.1 its failure NA 1.1.8 itsmr failure NA 1.5

IUPS failure NA 1 ivbma success YES 1.05 ivfixed success YES 1 ivivc cantLoad NA 0.2.2 ivlewbel failure NA 1.1 ivpack success NO 1.2 ivprobit success NO 1 iWeigReg timedOut NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 177

J / Package Compatibility Details CRAN packages with names beginning with J tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

jaatha failure NA 2.7.0

jackknifeKME cantLoad NA 1.1

jackstraw success YES 1

JADE failure NA 1.9-92

jagsUI cantLoad NA 1.3.1

JAGUAR cantLoad NA 1.1

JASPAR success MAYBE 0.0.1

JavaGD cantLoad NA 0.6-1

JBTools success NO 0.7.2.6

JGL timedOut NA 2.3

JGR cantLoad NA 1.7-16

jiebaR failure NA 0.4

jiebaRD success YES 0.1

JM failure NA 1.3-0

JMbayes failure NA 0.6-1

JMdesign success NO 1.1

Jmisc success YES 0.3.1

Johnson success YES 1.4

JohnsonDistribution failure NA 0.24

joineR success MAYBE 1.0-3

jointDiag success YES 0.2

jointPm success YES 2.3.1

JointRegBC failure NA 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 178

Matches Open- Package Package Name TERR Result Source R? Version

jomo success YES 0.1-2

JOP failure NA 3.6

JoSAE success NO 0.2.2

jpeg cantLoad NA NA

JPSurv failure NA 1.0.1

jSonarR cantLoad NA 1.1.1

jsonlite cantLoad NA NA

jtrans success YES 0.1

JudgeIt failure NA 1.5.1

Julia success YES 1.1

jvmr cantLoad NA 2.11.2.1

jwutil failure NA 1.0.2

K / Package Compatibility Details CRAN packages with names beginning with K tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

KANT cantLoad NA 2

KappaGUI noExamples NA 1.1

kappalab failure NA 0.4-6

kappaSize success YES 1.1

KappaV cantLoad NA 0.3

kaps failure NA 1.0.2

KATforDCEMRI cantLoad NA 0.74

kcirt success YES 0.6.0

kdetrees cantLoad NA 0.1.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 179

Matches Open- Package Package Name TERR Result Source R? Version kedd failure NA 1.0.1 kelvin success MAYBE 1.2-2

Kendall timedOut NA 2.2 kequate cantLoad NA 1.4.0 kerdiest failure NA 1.2 kernelFactory failure NA 0.2.0

Kernelheaping cantLoad NA 0.2 kernlab success MAYBE 0.9-19

KernSmooth success YES 2.23-13

KernSmoothIRT cantLoad NA 6.1

KFAS failure NA 1.0.4-1

KFKSDS failure NA 1.5 kimisc failure NA 0.2-1 kin.cohort success YES 0.6 kinfit failure NA 1.1.13 kinship2 timedOut NA 1.6.0 kintone cantLoad NA 0.1.1 kitagawa failure NA 2.1-0 kknn cantLoad NA 1.2-5 klaR timedOut NA 0.6-12 klausuR success NO 0.12-5 klin success YES 39118 km.ci success YES 0.5-2 kmc failure NA 0.1-2 kmconfband success YES 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 180

Matches Open- Package Package Name TERR Result Source R? Version kmi success NO 0.5.1

Kmisc cantLoad NA 0.5.0 kml cantLoad NA 2.2 kml3d cantLoad NA 2.2 kmlcov failure NA 1.0.1

KMsurv success YES 0.1-5 knitcitations cantLoad NA 1.0.5 failure NA 1.9 knitrBootstrap failure NA 0.9.0 knncat noExamples NA 1.2.1 knnGarden success NO 1.0.1 knnIndep success NO 2 knockoff failure NA 0.1.1 kobe cantLoad NA 1.3.2

KODAMA failure NA 0.0.1 kofnGA success YES 1 kohonen cantLoad NA 2.0.15 kolmim success YES 0.2

KoNLP cantLoad NA 0.76.9 koRpus failure NA 0.05-5

Kpart noExamples NA 1.1 kpodclustr success NO 1 kriging failure NA 1.1

KrigInv cantLoad NA 1.3.1

KRLS success YES 0.3-7

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 181

Matches Open- Package Package Name TERR Result Source R? Version

krm failure NA 2014.12-1

ks cantLoad NA NA

kSamples cantLoad NA 1

kselection failure NA 0.1.1

kst cantLoad NA 0.2-1

ktsolve success MAYBE 1.1

ktspair success NO 1

kulife failure NA 0.1-14

kyotil failure NA 2014.10-5

kza success YES 3.0.0

kzft success YES 0.17

kzs success MAYBE 1.4

L / Package Compatibility Details CRAN packages with names beginning with L tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

l2boost failure NA 1

labdsv failure NA 1.6-1

label.switching success YES 1.3

labeledLoop success YES 0.1

labeling success YES 0.3

labeltodendro failure NA 1.3

labstatR success NO 1.0.7

laeken timedOut NA 0.4.6

laercio success NO 1.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 182

Matches Open- Package Package Name TERR Result Source R? Version

LaF timedOut NA 0.6.1 laGP cantLoad NA 1.1-3

Lahman failure NA 3.0-1

LakeMetabolizer failure NA 1.1 lakemorpho cantLoad NA 1 lambda.r failure NA 1.1.6 lambda.tools success YES 1.0.3

Lambda4 failure NA 3

LambertW failure NA 0.5 landpred success YES 1 landsat failure NA 1.0.8 languageR failure NA 1.4.1 lar cantLoad NA 0.1-2

LARF success YES 1.2 lars cantLoad NA NA laser failure NA 2.4-1 lasso2 cantLoad NA NA lassoscore cantLoad NA 0.6 lassoshooting noExamples NA 0.1.5-1 latdiag success YES 0.2-1 latentnet cantLoad NA 2.6.0

Laterality failure NA 0.9.2 lattice timedOut NA 0.20-29 latticeDensity failure NA 1.0.7 latticeExtra failure NA 0.6-26

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 183

Matches Open- Package Package Name TERR Result Source R? Version

LatticeKrig cantLoad NA 3.4 lava timedOut NA 1.3 lava.tobit failure NA 0.4-7 lavaan failure NA 0.5-17 lavaan.survey failure NA 1.1 lawstat failure NA 2.4.1 lazy timedOut NA 1.2-15 lazyData success NO 1.0.3 lazyeval timedOut NA 0.1.10 lazyWeave cantLoad NA 2.2.5 lbfgs failure NA 1.2.1 lbiassurv cantLoad NA 1.1

LCA success MAYBE 0.1

LCAextend cantLoad NA 1.2 lcd timedOut NA 0.7-3 lcda success NO 0.3

LCFdata success NO 2 lcmm failure NA 1.6.6 lctools cantLoad NA 0.1-3 lda failure NA 1.3.2

LDAvis noExamples NA 0.2 ldbounds failure NA 1.1-1

LDcorSV success YES 1.3.1

LDheatmap fatalError NA 0.99-1 ldlasso cantLoad NA 3.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 184

Matches Open- Package Package Name TERR Result Source R? Version

LDOD cantLoad NA 1

LDPD success NO 1.0.2 ldr failure NA 1.3.3

LDRTools success NO 0.1

LDtests success YES 1 leaderCluster success YES 1.2

LeafAngle success YES 1.2-1 leafletR success MAYBE 0.3-1

LEAPFrOG success NO 1.0.7 leapp cantLoad NA 1.2 leaps success NO 2.9

LearnBayes timedOut NA 2.15 learningr success YES 0.29 lefse success YES 0.1 leiv failure NA 2.0-7

LeLogicielR success NO 1.2 lessR failure NA 3.1.1 lestat success YES 1.8 letsR cantLoad NA 1 lfe timedOut NA 1.8-1441 lfl failure NA 1 lfstat cantLoad NA 0.6.1 lga failure NA 1.1-1 lgarch success YES 0.5 lgcp cantLoad NA 1.3-6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 185

Matches Open- Package Package Name TERR Result Source R? Version

LGS success MAYBE 0.91 lgtdl success YES 1.1.3 lhs cantLoad NA NA libamtrack success MAYBE 0.5.5

LiblineaR success NO 1.80-10

LICORS cantLoad NA 0.2.0

LICurvature failure NA 0.1.1 lifecontingencies timedOut NA 1.1.5

LifeTables cantLoad NA 0.2

LIHNPSD failure NA 0.2.1 likelihood timedOut NA 1.6 likeLTD timedOut NA 5.4.0 likert failure NA 1.2

LIM failure NA 1.4.6 limitplot success YES 1.2 limSolve failure NA 1.5.5.1

LinCal success YES 1

LindenmayeR success YES 0.1-0

LinearizedSVR cantLoad NA 1.3 lineup cantLoad NA 0.34-1 linkcomm timedOut NA 1.0-11 linkim success YES 0.1 linkR success YES 1.0.0 linLIR success YES 1.1 linprog success NO 0.9-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 186

Matches Open- Package Package Name TERR Result Source R? Version

LinRegInteractive timedOut NA 0.3-0

LINselect failure NA 0.0-1 lint failure NA 0.3 lintr failure NA 0.2.0 liso success YES 0.2 lisp failure NA 0.1 lisrelToR failure NA 0.1.4 list cantLoad NA 7.1

LIStest success YES 2.1 llama cantLoad NA 0.7.2 lle failure NA 1.1 lllcrc cantLoad NA 1.2 lm.beta success NO 1.5-1 lm.br cantLoad NA 2.6 lme4 cantLoad NA NA lmec success YES 1 lmeNB cantLoad NA 1.2 lmeNBBayes cantLoad NA 1.2 lmenssp success NO 1

LMERConvenienceFunctions cantLoad NA 2.5 lmerTest cantLoad NA 2.0-20 lmeSplines success NO 1.1-10

LMest failure NA 2 lmeVarComp failure NA 1 lmf failure NA 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 187

Matches Open- Package Package Name TERR Result Source R? Version lmm success YES 0.9 lmmfit success NO 1 lmmlasso failure NA 0.1-2 lmmot success YES 0.1.2 lmms noExamples NA 1.2 lmodel2 success YES 1.7-2 lmom cantLoad NA 2.4 lmomco failure NA 2.1.1

Lmoments success YES 1.1-6 lmomRFA cantLoad NA 3 lmSupport cantLoad NA 2.9.1 lmtest cantLoad NA NA loa failure NA 0.2.21 localdepth success YES 0.5-7 localgauss cantLoad NA 0.34 localsolver failure NA 2.3 locfit cantLoad NA NA locits timedOut NA 1.4

Lock5Data noData NA 2.6 locpol cantLoad NA 0.6-0 loe timedOut NA 1 log4r failure NA 0.2 logbin failure NA 1

LogConcDEAD failure NA 1.5-9 logconcens success YES 0.16-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 188

Matches Open- Package Package Name TERR Result Source R? Version logcondens cantLoad NA 2.1.2 logcondens.mode timedOut NA 1.0.1 logcondiscr success YES 1.0.5 logconPH success YES 1.5 logging timedOut NA 0.7-103

LogicForest timedOut NA 2.1.0

LOGICOIL success NO 0.99.0

LogicReg timedOut NA 1.5.5 logistf cantLoad NA 1.21

LogisticDx cantLoad NA 0.1 logitchoice success YES 0.9.4

LogitNet success YES 0.1-1 logitnorm failure NA 0.8.29 loglognorm cantLoad NA 1.0.1 logmult failure NA 0.6.1

LogrankA success YES 1 logspline success YES 2.1.5 lokern cantLoad NA 1.1-6 lomb success NO 1 longCatEDA success NO 0.17 longitudinal success YES 1.1.10 longitudinalData cantLoad NA 2.2 longmemo failure NA 1.0-0 longpower failure NA 1.0-10 loop success NO 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 189

Matches Open- Package Package Name TERR Result Source R? Version

LoopAnalyst success YES 1.2-3 lordif cantLoad NA 0.2-2 lorec success YES 0.6.1

LOST cantLoad NA 1.1

LowRankQP success YES 1.0.2 lpc success YES 1.0.2

LPCM failure NA 0.44-8 lpint failure NA 2 lpme failure NA 1.0.1

LPmerge success YES 1.6 lpmodeler failure NA 0.2-1 lpridge cantLoad NA 1.0-7

LPS failure NA 1.0.4 lpSolve success YES 5.6.10 lpSolveAPI cantLoad NA NA

LPStimeSeries success NO 1.0-4 lqa failure NA 1.0-3 lqmm cantLoad NA NA lrmest success YES 1

LS2W success YES 1.3-3

LS2Wstat cantLoad NA 2.0-3 lsa failure NA 0.73

LSAfun cantLoad NA 0.3.2

LSC cantLoad NA 0.1.5

LSD failure NA 3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 190

Matches Open- Package Package Name TERR Result Source R? Version lsdv success YES 1.1 lsgl failure NA 1.0.123.1 lshorth success YES 0.1-6 lsmeans failure NA 2.14

LSMonteCarlo success YES 1 lspls noExamples NA 0.2-1 lsr failure NA 0.3.2 lss cantLoad NA 0.52 ltbayes success YES 0.3 ltm cantLoad NA 1.0-0 ltmle failure NA 0.9.3-1

LTPDvar success NO 1.1

LTR success YES 1.0.0 ltsa failure NA 1.4.4 ltsbase cantLoad NA 1.0.1 ltsk failure NA 1.0.1 lubridate cantLoad NA NA luca success YES 1.0-5 lucid success NO 1 lunar success MAYBE 0.1-04 lvm4net cantLoad NA 0.1

LVMMCOR failure NA 0.01.1

LVQTools noData NA 1.2 lxb noExamples NA 1.3 lymphclon failure NA 1.3.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 191

M / Package Compatibility Details CRAN packages with names beginning with M tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

m4fe success NO 0.1

maboost failure NA 1.0-0

MAc failure NA 1.1

MAclinical cantLoad NA 1.0-5

MAd failure NA 0.8-2

mada failure NA 0.5.6

MADAM success NO 1.2.2

mads success YES 0.1.1

madsim success NO 1.1

Maeswrap noExamples NA 1.4.11

magic failure NA 1.5-6

magicaxis failure NA 1.9.3

magrittr failure NA 1.5

mail noExamples NA 1

mailR cantLoad NA 0.4.1

MAINT.Data failure NA 0.3

makeProject noData NA 1

MALDIquant failure NA 1.11

MALDIquantForeign failure NA 0.9

mallet cantLoad NA 1

MAMA cantLoad NA 2.2.1

MAMS timedOut NA 0.3

MAMSE success YES 0.1-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 192

Matches Open- Package Package Name TERR Result Source R? Version managelocalrepo noExamples NA 0.1.4 manipulate noExamples NA 1.0.1

ManyTests success YES 1.1

Map2NCBI success NO 1

MAPA cantLoad NA 1.9 mapdata failure NA 2.2-3

MapGAM cantLoad NA 0.7-4

MAPLES failure NA 1 mapmisc failure NA 1.1.1 mapplots failure NA 1.5 mapproj failure NA 1.2-2 maps failure NA 2.3-9 mapStats cantLoad NA 1.17 maptools cantLoad NA 0.8-30 maptpx failure NA 1.9-1 maptree success NO 1.4-7 mAr success NO 1.1-2

42064 success MAYBE 1 mar1s failure NA 2.1 marelac success NO 2.1.4

MareyMap cantLoad NA 1.2 marg failure NA 1.2-2 markdown success NO 0.7.4 marked cantLoad NA 1.1.6 maRketSim failure NA 0.9.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 193

Matches Open- Package Package Name TERR Result Source R? Version markovchain timedOut NA 0.1.0

MarkowitzR failure NA 0.1402 marmap failure NA 0.9.1 marqLevAlg success NO 1.1

MARSS failure NA 3.9 maSAE failure NA 0.1-2

MASS timedOut NA 7.3-35

MASSTIMATE failure NA 1.2

MasterBayes success NO 2.52

MAT success NO 2.2

Matching timedOut NA 4.8-3.4

MatchingFrontier timedOut NA 0.3.17 matchingMarkets timedOut NA 0.1-2

MatchIt timedOut NA 2.4-21 mathgraph success YES 0.9-11 matie timedOut NA 1.2 matlab failure NA 1.0.2 matpow noExamples NA 0.1.1 matR failure NA 0.9

Matrix cantLoad NA NA matrixcalc success YES 1.0-3

MatrixEQTL failure NA 2.1.1

MatrixModels failure NA 0.4-0 matrixpls cantLoad NA 0.5.0 matrixStats cantLoad NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 194

Matches Open- Package Package Name TERR Result Source R? Version

MATTOOLS success YES 1.1

MAVIS cantLoad NA 1

MAVTgsa failure NA 1.3

MaXact success YES 0.2.1 maxent cantLoad NA 1.3.3.1 maxLik failure NA 1.2-0 maxlike failure NA 0.1-5

MaxPro success YES 3.1-2 maxstat noData NA 0.7-20

MBA success YES 0.0-8 mbbefd failure NA 0.1

MBCluster.Seq success YES 1

MBESS failure NA 3.3.3 mbest cantLoad NA 0.1

MBI success YES 1 mblm failure NA 0.12

MBmca cantLoad NA 0.0.3-5 mbmdr failure NA 2.6 mboost cantLoad NA NA mc2d failure NA 0.1-15

MC2toPath cantLoad NA 0.0.16

MCAPS cantLoad NA 0.3-2

MCAvariants failure NA 1 mcbiopi noData NA 1.1.2 mcc success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 195

Matches Open- Package Package Name TERR Result Source R? Version mcclust success NO 1

MCDA cantLoad NA 0.0.8 mcga noExamples NA 2.0.9 mcgibbsit failure NA 1.1.0 mcGlobaloptim cantLoad NA 0.1 mcheatmaps failure NA 1.0.0

MChtest success NO 1.0-2 mcIRT failure NA 0.41 mcll cantLoad NA 1.2 mclogit cantLoad NA 0.3-1 mclust cantLoad NA NA mcmc timedOut NA 0.9-3

MCMC.OTU failure NA 1.0.8

MCMC.qpcr failure NA 1.1.3

MCMCglmm failure NA 2.21

MCMCpack cantLoad NA NA mcmcplots failure NA 0.4.1 mcmcse success YES 1.0-1 mco failure NA 1.0-15.1

Mcomp success YES 2.05

MConjoint success NO 0.1

MCPAN failure NA 1.1-15

McParre cantLoad NA 1.0.1

MCPerm success YES 1.1.4

MCPMod failure NA 1.0-8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 196

Matches Open- Package Package Name TERR Result Source R? Version mcprofile success NO 0.2-1 mcr failure NA 1.2.1

MCS noExamples NA 0.1.0 mcsm timedOut NA 1

McSpatial failure NA 2 mda cantLoad NA 0.5.3 mdatools noData NA 0.5.3 mded success YES 0.1-1

MDM failure NA 1.3

MDPtoolbox success NO 4.0.2

MDR success NO 1.2 mdscore failure NA 0.1-2 mdsdt success YES 1 measuRing failure NA 0.1 meboot cantLoad NA 1.4-5 mederrRank success YES 0.0.7 mediation cantLoad NA 4.4.3 medicalrisk failure NA 1.1

MedOr failure NA 0.1 medSTC timedOut NA 1.0.0

MEET cantLoad NA 5.1.1 mefa success MAYBE 3.2-5 mefa4 failure NA 0.3-1 megaptera success NO 1.0-0 meifly success NO 0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 197

Matches Open- Package Package Name TERR Result Source R? Version mem success YES 1.4 memgene timedOut NA 1 memisc cantLoad NA 0.96-10 memoise success NO 0.2.1

MEMSS failure NA 0.9-2 memuse timedOut NA 1.1

MenuCollection cantLoad NA 1.2

MergeGUI cantLoad NA 0.2-1 merror success NO 2.0.1

MESS failure NA 0.3-2 meta failure NA 4.0-3

MetABEL success YES 0.2-0

MetabolAnalyze cantLoad NA 1.3 metabolomics failure NA 0.1.4 metacom cantLoad NA 1.4.2 metacor success YES 1.0-2

MetaDE failure NA 1.0.5 metafolio failure NA 0.1.0 metafor timedOut NA 1.9-5 metagen cantLoad NA 1

MetaLandSim cantLoad NA 0.2 metaLik success YES 0.41.0 metaMA failure NA 2.1 metamisc cantLoad NA 0.1.1 metaMix cantLoad NA 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 198

Matches Open- Package Package Name TERR Result Source R? Version metap success YES 0.6

MetaPCA noExamples NA 0.1.4 metaplus cantLoad NA 0.7-1

MetaQC noExamples NA 0.1.13 metaRNASeq timedOut NA 0.4 metasens failure NA 0.2-0

MetaSKAT failure NA 0.4 metatest success YES 1.0-4

Metatron cantLoad NA 0.1-1 meteoForecast success NO 0.43 meteogRam success YES 1

MetFns success NO 1

Meth27QC noData NA 1.1

MethComp failure NA 1.22

Methplot success MAYBE 1

Metrics failure NA 0.1.1 metRology failure NA 0.9-17 mets cantLoad NA 1

MetSizeR cantLoad NA 1.1

MetStaT success NO 1 mewAvg success NO 0.3.0

MExPosition success NO 2.0.3

MF success YES 4.3.2 mfblock success YES 1

MFDA failure NA 1.1-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 199

Matches Open- Package Package Name TERR Result Source R? Version

MFHD cantLoad NA 0.0.1 mFilter success YES 0.1-3 mfp success NO 1.5.0

MfUSampler success YES 0.9.1 mfx cantLoad NA 1.1 mgcv timedOut NA 1.8-3

MGL noExamples NA 1.1

MGLM failure NA 0.0.6 mgpd success YES 1.99 mgraph noExamples NA 1.03

MGRASTer cantLoad NA 0.9

MGSDA success YES 1.1 mGSZ success YES 1

MHadaptive success NO 1.1-8 mhsmm failure NA 0.4.14 mht noExamples NA 3.0.11 mhurdle cantLoad NA 1.0-1 mi cantLoad NA 0.09-19 mice failure NA 2.22 miceadds cantLoad NA 1 micEcon success NO 0.6-12 micEconAids cantLoad NA 0.6-16 micEconCES cantLoad NA 0.9-8 micEconSNQP cantLoad NA 0.6-6 microbenchmark cantLoad NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 200

Matches Open- Package Package Name TERR Result Source R? Version

MicroDatosEs cantLoad NA 0.6.3.1 micromap cantLoad NA 1.9 micromapST noData NA 1.0.3 micropan timedOut NA 1

MicroStrategyR noExamples NA 1.0-1

MicSim failure NA 1.0.6 midasr cantLoad NA 0.3

MigClim failure NA 1.6 migest failure NA 1.6 migration.indices success YES 0.3.0 migui success MAYBE 0.00-09

MIICD cantLoad NA 1.1

MILC success YES 1 mime cantLoad NA NA

MImix success YES 1

MindOnStats success YES 0.11 minerva success YES 1.4.1

Miney noExamples NA 0.1 miniCRAN timedOut NA 0.1-1 miniGUI timedOut NA 0.8.0 minimax success YES 1 minpack.lm cantLoad NA NA minPtest failure NA 1.7 minqa cantLoad NA NA minque success YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 201

Matches Open- Package Package Name TERR Result Source R? Version minxent success YES 0.01 miP cantLoad NA 1.1 mipfp success YES 1

MIPHENO noExamples NA 1.2 miRada success YES 1.13.8-8 mirt noData NA 0.3 mirtCAT noData NA 0.3 miRtest cantLoad NA 1.8 misc3d failure NA 0.8-4 miscF cantLoad NA 1.2-6 miscFuncs noData NA 1.2-6 miscset cantLoad NA 0.4 miscTools failure NA 0.6-16 missForest success YES 1.4

MissingDataGUI cantLoad NA 0.2-2 missMDA success NO 1.7.3

MissMech success NO 1.0.1

MiST cantLoad NA 1 mistat failure NA 1.0-2 mistral cantLoad NA 1.1-1

MitISEM failure NA 1 mitools fatalError NA 2.3 mix success YES 1.0-8 mixAK cantLoad NA 3.8 mixcat success NO 1.0-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 202

Matches Open- Package Package Name TERR Result Source R? Version mixdist failure NA 0.5-4

MixedTS success NO 1.0.1 mixer failure NA 1.8 mixexp timedOut NA 1.1.9

MixGHD failure NA 1.3 mixlm noData NA 1.0.7 mixlow failure NA 1.0.1

MixMAP cantLoad NA 1.3.1 mixOmics timedOut NA 5.0-3 mixor cantLoad NA 1.0.2 mixPHM success YES 0.7-1 mixRasch success NO 1.1 mixreg success YES 0.0-5 mixsep success MAYBE 0.2.1-2

MixSim failure NA 1.0-9 mixsmsn success YES 1.0-9 mixtools failure NA 1.0.2 mixture success NO 1.2

MixtureInf success YES 1.0-1 mizer timedOut NA 0.2 mkde failure NA 0.1 mkin cantLoad NA 0.9-34

MKLE failure NA 0.05

MKmisc cantLoad NA 0.96 mkssd success YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 203

Matches Open- Package Package Name TERR Result Source R? Version mlbench cantLoad NA NA

MLCM success NO 0.4.1 mlDNA timedOut NA 1.1

MLDS success NO 0.4.3 mlearning cantLoad NA 1.0-0

MLEcens failure NA 0.1-4 mlegp success YES 3.1.4 mleur cantLoad NA 1.0-6 mlgt noExamples NA 0.16 mlica2 success YES 2.1 mlmmm noExamples NA 0.3-1.2 mlmRev failure NA 1.0-6 mlogit cantLoad NA 0.2-4 mlogitBMA failure NA 0.1-6 mlPhaser success NO 0.01 mlr cantLoad NA 2.2

MLRMPA failure NA 1 mlxR noExamples NA 2.1.0

MM failure NA 1.6-2 mmand failure NA 1.1.0 mmap cantLoad NA 0.6-12 mmcm success YES 1.2-5 mmds success YES 1.1 mme failure NA 0.1-5 mmeln success YES 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 204

Matches Open- Package Package Name TERR Result Source R? Version mmeta success NO 2.2

MMIX failure NA 1.2 mmm success NO 1.4 mmm2 timedOut NA 1.2

MMMS success NO 0.1 mmod timedOut NA 1.2.1

MMS noExamples NA 3 mnlogit cantLoad NA 1.2.0

MNM failure NA 1.0-1 mnormpow success YES 0.1.1 mnormt success YES 1.5-1

MNP cantLoad NA 2.6-4 mobForest cantLoad NA 1.2

Mobilize success YES 2.16-4

MOCCA success YES 1.2

Modalclust failure NA 0.6 modeest failure NA 2.1 modehunt success MAYBE 1.0.6 modelfree failure NA 1.1-1

ModelGood failure NA 1.0.9

ModelMap failure NA 3.0.15 modeltools success MAYBE 0.2-21 modiscloud success YES 0.14

MODISTools noData NA 0.94.4 modTempEff success NO 1.5.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 205

Matches Open- Package Package Name TERR Result Source R? Version moduleColor success YES 1.08-3

MOJOV success NO 1.0.1 mokken cantLoad NA 2.7.7 mombf cantLoad NA 1.5.9 moments success YES 0.14

Momocs cantLoad NA 0.2-6 mondate failure NA 0.10.01.02

MonetDB.R noExamples NA 0.9.5 monitoR failure NA 1.0.2 monmlp failure NA 1.1.2 monomvn failure NA 1.9-5

MonoPoly success NO 0.2-8 monreg noData NA 0.1.2 moonBook failure NA 0.1.1 moonsun failure NA 0.1.3 mopsocd success YES 0.5.1

MOrder success YES 0.1 morgenstemning failure NA 1

Morpho cantLoad NA 2.2 morse success NO 1.0.2

MorseGen success YES 1.2 mosaic timedOut NA 0.9.2-2 mosaicData success NO 0.9.1 moult success MAYBE 1.4 mountainplot success NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 206

Matches Open- Package Package Name TERR Result Source R? Version mousetrack success YES 1.0.0 move failure NA 1.2.475 movMF failure NA 0.2-0 mp success YES 0.2.0 mpa success NO 0.7.3

MPAgenomics failure NA 1.1.2 mpath failure NA 0.1-17

MPCI success YES 1.0.6 mpcv success YES 1.1

MPDiR timedOut NA 0.1-16 mph success YES 0.9

MPINet failure NA 1

MplusAutomation success YES 0.6-3 mpm success NO 1.0-22 mpMap cantLoad NA 1.14 mpmcorrelogram success MAYBE 0.1-3 mpmi success NO 0.41 mpoly failure NA 0.0.5

Mposterior success YES 0.1.2 mppa failure NA 1

MPSEM failure NA 0.2-6 mpt failure NA 0.5-0

MPTinR failure NA 1.6.3

MPV failure NA 1.35 mQTL cantLoad NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 207

Matches Open- Package Package Name TERR Result Source R? Version mra failure NA 2.13 mratios failure NA 1.3.17

MRCE failure NA 2

MRCV cantLoad NA 0.3-3 mrds cantLoad NA 2.1.10 mreg success YES 1.1

MRH success YES 2 mritc failure NA 0.5-0 mRm failure NA 1.1.5

MRMR cantLoad NA 0.1.3 mRMRe timedOut NA 2.0.5

MRSP failure NA 0.4.3

MRsurv success YES 0.2

MRwarping failure NA 1 msap failure NA 1.1.8 msarc cantLoad NA 1.4.3

MsatAllele failure NA 1.05 msBP cantLoad NA 1.0-2.1

MSBVAR cantLoad NA 0.9-1 msda success NO 1.0.1 mseapca success YES 1

MSeasy cantLoad NA 5.3.3

MSeasyTkGUI cantLoad NA 5.3.3

MSG timedOut NA 0.2.2 msgl failure NA 2.0.125.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 208

Matches Open- Package Package Name TERR Result Source R? Version msgpackR success YES 1.1 msgps success YES 1.3 msir cantLoad NA 1.3

MSIseq cantLoad NA 0.99.1 msm cantLoad NA NA msme timedOut NA 0.5.1 msos cantLoad NA 1.0.1

MSQC cantLoad NA 1.0.1 msr success MAYBE 0.4.1 msSurv failure NA 1.1-2

MST success YES 1 mstate timedOut NA 0.2.7

MSwM failure NA 1.2 mtk cantLoad NA 1

MTS success NO 0.32 mtsdi success NO 0.3.3

MTurkR success MAYBE 0.6

MUCflights failure NA 0.0-3

MuFiCokriging failure NA 1.2 muhaz cantLoad NA NA multcomp failure NA 1.3-8 multcompView failure NA 0.1-5

MultEq success YES 2.3 multgee failure NA 1.5.0 multiband success NO 0.1.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 209

Matches Open- Package Package Name TERR Result Source R? Version multibiplotGUI cantLoad NA 0.0-1

Multiclasstesting success NO 1.3.9

MultiCNVDetect success YES 0.1-1 multicon failure NA 1.5 multicool success YES 0.1-2 multiDimBio cantLoad NA 0.3.3 multigroup failure NA 0.4.3

MultiLCIRT failure NA 2.7 multilevel failure NA 2.5 multilevelPSA cantLoad NA 1.2.2

MultiMeta cantLoad NA 0.1 multinbmod success YES 1

MultinomialCI success YES 1 multinomRob failure NA 1.8-6.1

MultiOrd noExamples NA 2.1

MultiPhen cantLoad NA 2.0.0 multiPIM success YES 1.4-1 multipleNCC success YES 1 multiplex failure NA 1.2 multipol failure NA 1.0-6 multisensi success NO 1.0-7 multispatialCCM success NO 1

MultiSV success YES 0.0-67 multitable failure NA 1.6 multitaper failure NA 1.0-9

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 210

Matches Open- Package Package Name TERR Result Source R? Version multivator failure NA 1.1-4 multiwayvcov failure NA 1.2.1

MultNonParam success NO 1 multxpert failure NA 0.1 muma success MAYBE 1.4

MuMIn failure NA 1.12.1 munfold cantLoad NA 0.3-1 munsell success MAYBE 0.4.2 muscle success YES 3.8.31-4 musicNMR success MAYBE 0.0.2 muStat success NO 1.7.0 mutoss cantLoad NA 0.1-8 mutossGUI cantLoad NA 0.1-9

MVA failure NA 1.0-5 mvabund failure NA 3.9.3

MVar.pt success NO 1

MVB success YES 1.1 mvbutils cantLoad NA 2.7.4.1 mvc failure NA 1.3 mvctm cantLoad NA 1 mvcwt success YES 1.3 mvglmmRank success YES 1.0-2 mvinfluence failure NA 0.6 mvmeta success YES 0.4.5 mvMORPH cantLoad NA 1.0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 211

Matches Open- Package Package Name TERR Result Source R? Version

MVN cantLoad NA 3.7 mvna success NO 1.2-3 mvnfast success YES 0.1.3 mvngGrAd failure NA 0.1.4 mvnmle failure NA 0.1-11 mvnormtest success YES 0.1-9 mvnpermute success YES 1.0.0 mvoutlier noData NA 2.0.5 mvProbit success NO 0.1-0 mvprpb success YES 1.0.4

MVR failure NA 1.20.0 mvrtn success YES 1 mvsf success YES 1 mvShapiroTest success YES 1 mvSLOUCH noData NA 1.1.4 mvtmeta failure NA 1 mvtnorm failure NA 1.0-2 mvtsplot noData NA 1.0-1 mwa cantLoad NA 0.4 mwaved cantLoad NA 1.1.1 mxkssd success YES 1.1

MXM timedOut NA 0.2.1 mycobacrvR noExamples NA 1 mycor timedOut NA 0.1 myepisodes failure NA 1.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 212

Matches Open- Package Package Name TERR Result Source R? Version

Myrrix cantLoad NA 1.1

Myrrixjars noData NA 1.0-1

myTAI failure NA 0.0.2

mztwinreg cantLoad NA 1.0-1

N / Package Compatibility Details CRAN packages with names beginning with N tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

nabor failure NA 0.4.4

NADA failure NA 1.5-6

nadiv failure NA 2.13.2

NAM failure NA 1.0.2.1

namespace cantLoad NA 0.9.1

nanop failure NA 2.0-4

NanoStringNorm cantLoad NA 1.1.17

NAPPA success YES 2

nasaweather noData NA 0.1

nat cantLoad NA 1.5.12

nat.nblast cantLoad NA 1.5

nat.templatebrains cantLoad NA 0.4.1

nat.utils failure NA 0.4.2

naturalsort failure NA 0.1.2

NB success MAYBE 0.9

NbClust failure NA 2.0.3

NBDdirichlet success NO 1.01

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 213

Matches Open- Package Package Name TERR Result Source R? Version nbpMatching cantLoad NA 1.4.4

NBPSeq cantLoad NA 0.3.0 nCal cantLoad NA 14.11-8

NCBI2R timedOut NA 1.4.6 ncbit success YES 2013.03.29 ncdf cantLoad NA NA ncdf.tools cantLoad NA 0.7.1.291 nCDunnett success YES 1.0.0 ncf success YES 1.1-5 ncg success YES 0.1.1

NCmisc failure NA 1.1.3 ncvreg success NO 3.2-0 ndl success NO 0.2.16 ndtv cantLoad NA 0.5.1 neariso success YES 1

NeatMap cantLoad NA 0.3.6.2 needy success YES 0.2

NEff cantLoad NA 1 negenes success YES 1.0-1 neldermead failure NA 1.0-10 nephro success YES 1

NestedCohort failure NA 1.1-3 netClass cantLoad NA 1.2.1

NetCluster cantLoad NA 0.2

NetComp cantLoad NA 1.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 214

Matches Open- Package Package Name TERR Result Source R? Version

NetData success YES 0.3 netgsa cantLoad NA 1

NetIndices success YES 1.4.4 netmeta failure NA 0.6-0 nets failure NA 0.1

NetSim success YES 0.9 nettools cantLoad NA 1.0.1 netweavers cantLoad NA 1.1 network failure NA 1.11.3 networkD3 cantLoad NA 0.1.1 networkDynamic cantLoad NA 0.7.1 networkDynamicData failure NA 0.1.0 networkreporting cantLoad NA 0.0.1 networksis cantLoad NA 2.1-2 networkTomography cantLoad NA 0.3 neural success YES 1.4.2.2 neuralnet failure NA 1.32

NeuralNetTools noData NA 1.0.0 neuroblastoma noData NA 1 neuroim success NO 0.0.3 neuRosim cantLoad NA 0.2-12

Newdistns success YES 1 nFactors success NO 2.3.3 ngram success NO 1.1 ngramr cantLoad NA 1.4.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 215

Matches Open- Package Package Name TERR Result Source R? Version ngspatial cantLoad NA 1.0-5

NHANES success YES 1

NHEMOtree cantLoad NA 1 nhlscrapr cantLoad NA 1.8

NHMM cantLoad NA 3.5

NHPoisson failure NA 3 nicheROVER success NO 1

NightDay failure NA 1.0.1

Nippon timedOut NA 0.5.3

NISTnls success NO 0.9-13

NISTunits success YES 1.0.0 nlADG cantLoad NA 0.1-0 nleqslv cantLoad NA NA nlme timedOut NA 3.1-118 nlmeODE cantLoad NA 1.1 nlmeU failure NA 0.70-3 nlmrt failure NA 2013-9.25 nloptr cantLoad NA NA

NLP failure NA 0.1-6

NLPutils cantLoad NA 0.0-1 nlreg cantLoad NA 1.2-2

NLRoot success YES 1 nls2 failure NA 0.2 nlsem success NO 0.1 nlsMicrobio success NO 0.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 216

Matches Open- Package Package Name TERR Result Source R? Version nlsmsn noExamples NA 0.0-4 nlstools failure NA 1.0-0

NlsyLinks failure NA 1.302 nlt success YES 2.1-3 nlts failure NA 0.2-0 nLTT cantLoad NA 1 nlWaldTest failure NA 1.0.1 nmcdr success YES 0.3.0

NMF cantLoad NA 0.20.5

NMFN failure NA 2

NMOF failure NA 0.34-0 nnet cantLoad NA NA nnls cantLoad NA NA nodeHarvest success YES 0.6 nodiv timedOut NA 1.0.1 noia success YES 0.97.1

NominalLogisticBiplo success NO 0.2 t noncensus noData NA 0.1 nonlinearTseries cantLoad NA 0.2.1 nonnest2 cantLoad NA 0.2 nonparaeff failure NA 0.5-8

NonpModelCheck failure NA 1 nonrandom cantLoad NA 1.42 nontarget cantLoad NA 1.7 nontargetData noData NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 217

Matches Open- Package Package Name TERR Result Source R? Version nopp cantLoad NA 1.0.4 nor1mix failure NA 1.2-0 norm cantLoad NA NA

NormalGamma success MAYBE 1.1

NormalLaplace failure NA 0.2-0 normalp success NO 0.7.0

NormPsy success NO 1.0.2

NORMT3 success YES 1.0-3 normtest success YES 1.1 normwhn.test noData NA 1 nortest success YES 1.0-2 nose noExamples NA 1 notifyR cantLoad NA 1.02 noweb success YES 1.0-4

Nozzle.R1 noData NA 1.1-1 np cantLoad NA 0.60-2 nparcomp timedOut NA 2.5 nparLD failure NA 2.1

NPBayesImpute failure NA 0.4 npbr cantLoad NA 1

NPCD success NO 1.0-7

NPCirc cantLoad NA 2.0.1 npcp cantLoad NA 0.1-1 npde timedOut NA 2

NPHMC failure NA 2.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 218

Matches Open- Package Package Name TERR Result Source R? Version npIntFactRep failure NA 1 nplplot failure NA 4.5 nplr failure NA 0.1-1

NPMLEcmprsk noExamples NA 2 npmlreg failure NA 0.46-1

NPMPM success YES 1 npmv failure NA 2.1

NPMVCP success YES 1.1 nppbib success YES 1.0-0 npRmpi cantLoad NA 0.60-2

NPS success YES 1.1

NPsimex failure NA 0.2-1 npsm cantLoad NA 0.5 npsp failure NA 0.3-6 npst success YES 2

NRAIA failure NA 0.9-8

NSA noExamples NA 0.0.32 nscancor failure NA 0.6

NScluster failure NA 1.0.2 nsga2R success YES 1 nsgp success YES 1.0.5

NSM3 cantLoad NA 1.1 nsprcomp failure NA 0.5 nsRFA failure NA 0.7-12 nullabor cantLoad NA 0.3.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 219

Matches Open- Package Package Name TERR Result Source R? Version

numbers timedOut NA 0.4-5

numDeriv failure NA 2012.9-1

numOSL success NO 1.7

nutshell success NO 2

nutshell.audioscrobbl success NO 1 er

nutshell.bbdb success NO 1

nws failure NA 1.7.0.1

nycflights13 fatalError NA 0.1

O / Package Compatibility Details CRAN packages with names beginning with O tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

OAIHarvester success NO 0.1-7

Oarray failure NA 1.4-5

oaxaca success MAYBE 0.1

objectProperties failure NA 0.6.5

objectSignals success NO 0.10.2

obliclus success YES 0.9

oblique.tree failure NA 1.1.1

obliqueRF success MAYBE 0.3

obs.agree success YES 1

obsSens success YES 1.3

oc failure NA 0.95

occ failure NA 1

oce failure NA 0.9-14

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 220

Matches Open- Package Package Name TERR Result Source R? Version ocean failure NA 0.1-0

OceanView cantLoad NA 1.0.2 ocedata success YES 0.1.2

ODB timedOut NA 1.1.1 odfWeave failure NA 0.8.4 odfWeave.survey noData NA 1

ODMconverter cantLoad NA 2 oem success MAYBE 1.02.1

Ohmage success YES 2.11-4

OIdata failure NA 1

OIsurv success YES 0.2

OjaNP success YES 0.9-8 okmesonet noExamples NA 0.1.5

OligoSpecificitySystem noExamples NA 1.3

OLScurve success YES 0.2.0 omd noData NA 1

OmicKriging failure NA 1.3 oncomodel failure NA 1

Oncotree failure NA 0.3.3 onemap success NO 2.0-4

ONETr success NO 1.0.2

OneTwoSamples failure NA 1.0-3 onion failure NA 1.2-4 onlinePCA failure NA 1.0-1 onls failure NA 0.1-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 221

Matches Open- Package Package Name TERR Result Source R? Version

OOmisc success YES 1.2

OpasnetUtils cantLoad NA 1.1.0

OPDOE success YES 1.0-9

OPE success NO 0.7 opefimor failure NA 1.1 openair timedOut NA 1.1-0 opencpu cantLoad NA 1.4.5 openintro failure NA 1.4

OpenMPController success YES 0.1-2 openNLP cantLoad NA 0.2-3 openNLPdata noData NA 1.5.3-1

OpenRepGrid cantLoad NA 0.1.9 openssl cantLoad NA NA

OpenStreetMap cantLoad NA 0.3.1 opentraj failure NA 1 openxlsx failure NA 2.2.1 operator.tools success YES 1.3.0 operators failure NA 0.1-7

OPI timedOut NA 2.1 opm timedOut NA 1.1.0 opmdata failure NA 0.7.0 ops success YES 1 optAUC success YES 1 optBiomarker cantLoad NA 1.0-27 optextras success NO 2013-10.28

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 222

Matches Open- Package Package Name TERR Result Source R? Version

OptHedging success YES 1

OptimalCutpoints success YES 1.1-3 optimbase success YES 1.0-9 optimsimplex success YES 1.0-5 optimx success NO 2013.8.7

OptInterim cantLoad NA 3.0.1

OptionPricing failure NA 0.1 optiRum cantLoad NA 0.35 optiscale success YES 1.1 optmatch cantLoad NA 0.9-3 optparse failure NA 1.3.0 optpart failure NA 2.1-1 optR success NO 1.1.1 optrees timedOut NA 1 orca failure NA 1

ORCI success YES 1.1 orclus success NO 0.2-5

ORCME timedOut NA 2.0.1 orcutt success NO 1.1 ordBTL cantLoad NA 0.8 orddom failure NA 3.1

ORDER2PARENT failure NA 1 orderbook failure NA 1.03 orderedLasso success YES 1.7

OrdFacReg cantLoad NA 1.0.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 223

Matches Open- Package Package Name TERR Result Source R? Version ordinal failure NA 2014.12-22 ordinalgmifs timedOut NA 1.0.2

OrdinalLogisticBiplot success YES 0.4

OrdLogReg timedOut NA 1.1

OrdMonReg success MAYBE 1.0.3

OrdNor success YES 1 ordPens failure NA 0.2-1 ore cantLoad NA 1.0.6

OrgMassSpecR success NO 0.4-4 orgR cantLoad NA 0.9.0

ORIClust success YES 1.0-1 orientlib failure NA 0.10.3 orloca failure NA 4.2 orloca.es failure NA 4.1

ORMDR success YES 1.3-2 oro.dicom failure NA 0.4.1 oro.nifti failure NA 0.4.0 oro.pet success YES 0.2.3 orQA success YES 0.2.1 orsk failure NA 1.0-1 orthopolynom success YES 1.0-5 osDesign success NO 1.7 osmar timedOut NA 1.1-7 ouch success NO 2.8-4 outbreaker timedOut NA 1.1-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 224

Matches Open- Package Package Name TERR Result Source R? Version

OutbreakTools cantLoad NA 0.1-11

OutlierDC success YES 0.3-0

OutlierDM success MAYBE 1.1.1

outliers success YES 0.14

OutrankingTools cantLoad NA 1

OUwie cantLoad NA 1.43

overlap success YES 0.2.4

oz success YES 1.0-20

P / Package Compatibility Details CRAN packages with names beginning with P tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

p2distance success YES 1.0.1

p3state.msm failure NA 1.3

pa failure NA 1.2-1

pacbpred success YES 0.92.2

pack success YES 0.1-1

packClassic success YES 0.5.2

packdep timedOut NA 0.3.1

packHV failure NA 1.8

packrat noExamples NA 0.4.2-1

packS4 success NO 0.9.1

paf failure NA 1

PAGI cantLoad NA 1

pairedCI success YES 0.5-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 225

Matches Open- Package Package Name TERR Result Source R? Version

PairedData cantLoad NA 1.0.1 pairheatmap failure NA 1.0.1

PairViz timedOut NA 1.2.1 pairwise failure NA 0.2.5 pairwiseCI failure NA 0.1-22 palaeoSig cantLoad NA 1.1-2 paleobioDB noExamples NA 0.3 paleofire cantLoad NA 1.1.5 paleoMAS failure NA 2.0-1 paleotree timedOut NA 2.2 paleoTS failure NA 0.4-4 palinsol success NO 0.92 pamm cantLoad NA 0.7 pamr success NO 1.55 pan success NO 0.9

PANDA cantLoad NA 0.9.9 pander success NO 0.5.1 panelaggregation cantLoad NA 0.1 panelAR success NO 0.1

Paneldata success NO 1

PANICr noData NA 0.0.0.2 papeR failure NA 0.5-0

ParallelForest success NO 1.1.0 parallelize.dynamic noData NA 0.9-1 parallelMap cantLoad NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 226

Matches Open- Package Package Name TERR Result Source R? Version parallelMCMCcombine success YES 1

ParamHelpers failure NA 1.4 paramlink noData NA 0.9-6 paran noData NA 1.5.1 parboost noData NA 0.1.3 parcor noData NA 0.2-6

ParDNAcopy cantLoad NA 2

ParentOffspring success YES 1

ParetoPosStable cantLoad NA 1.0.3 parfm noData NA 2.5.6 parfossil noData NA 0.2.0 parma noData NA 1.5-1 parmigene noData NA 1.0.2 parsedate noData NA 1.1.1 partialAR cantLoad NA 1.0.5 partialOR noData NA 0.9 partitionMap noData NA 0.5 partitionMetric noData NA 1.1 partitions noData NA 1.9-15 partsm noData NA 1.1-2 party noData NA 1.0-18 partykit noData NA 0.8-4 parviol noData NA 1.1

PAS failure NA 1.2 pass noData NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 227

Matches Open- Package Package Name TERR Result Source R? Version pastecs noData NA 1.3-18 pastis noData NA 0.1-2

PASWR cantLoad NA 1.1

PASWR2 cantLoad NA 1 patchDVI noData NA 1.9.1601 patchPlot noData NA 0.1.5 patchSynctex noData NA 0.1-0 pathClass noData NA 0.9.4 pathdiagram noData NA 0.1.9 pathmox noData NA 0.2.0 pathological failure NA 0.0-3

PatternClass failure NA 1.5 pauwels2014 noData NA 1 pavo noData NA 0.5-1 pawacc noData NA 1.2.1

PAWL timedOut NA 0.5 pbapply noData NA 1.1-1 pbatR noData NA 2.2-9

PBC cantLoad NA 1.2

PBD cantLoad NA 1 pbdMPI noData NA 0.2-5 pbdNCDF4 noData NA 0.1-4 pbdPROF noData NA 0.2-3 pbdSLAP noData NA 0.2-0

PBImisc failure NA 0.999

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 228

Matches Open- Package Package Name TERR Result Source R? Version pbivnorm noData NA NA pbkrtest noData NA 0.4-2 pbo noData NA 1.3.4 pBrackets failure NA 1 pbs noData NA 1.1

PBSadmb noExamples NA 0.68.104

PBSddesolve failure NA 1.11.29

PBSmapping failure NA 2.68.68

PBSmodelling failure NA 2.66.264 pca3d noData NA 0.3 pcaL1 noData NA 1.2.1 pcalg noData NA 2.0-3

PCAmixdata success NO 2.2 pcaPP noData NA NA

PCDSpline success NO 1 pcg noData NA 1.1

PCGSE success YES 0.2

PCICt cantLoad NA NA pcIRT noData NA 0.1

PCIT timedOut NA 1.04-5 pcnetmeta noData NA 1.2

PCovR failure NA 2.5

PCPS cantLoad NA 1.0.2 pcrcoal noData NA 1.1

PCS success YES 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 229

Matches Open- Package Package Name TERR Result Source R? Version pcse noData NA 1.9 pdc noData NA 1.0.2 pdfCluster noData NA 1.0-2 pdfetch noData NA 0.1.6 pdist noData NA NA pdmod noData NA 1 pdR noData NA 1.2

PDSCE timedOut NA 1.2 peacots noData NA 1.1

Peaks failure NA 0.2 pear noData NA 1.2 pearson7 noData NA 1

PearsonDS failure NA 0.97

PearsonICA success YES 1.2-4 pec noData NA NA pedantics noData NA 1.5

PedCNV failure NA 0.1 pedgene noData NA 2.1 pedigree noData NA 1.4 pedigreemm noData NA 0.3-3 pedometrics noData NA 0.4-1 pegas noData NA 0.6

PEIP success NO 1.7

PEMM success YES 1 penalized noData NA 0.9-45

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 230

Matches Open- Package Package Name TERR Result Source R? Version penalizedLDA noData NA 1 penalizedSVM noData NA 1.1 pencopula noData NA 0.3.5 pendensity noData NA 0.2.7 penDvine noData NA 0.2.2 penMSM noData NA 0.99 pensim noData NA 1.2.9 peperr noData NA 1.1-7 peplib noData NA 1.5.1

PepPrep success NO 1.1.0 peptider noData NA 0.1.6

Peptides success NO 1.0.3 pequod noData NA 0.0-3 perARMA noData NA 1.5

PerFit cantLoad NA 1.2

PerfMeas success YES 1.2.1

PerformanceAnalytics cantLoad NA NA performanceEstimation noData NA 1.0.0 perm noData NA 1.0-0.0

PermAlgo success MAYBE 1

PerMallows success YES 1.7 permtest noData NA 1.2 permute noData NA 0.8-3

PERregress failure NA 1.0-8 perry noData NA 0.2.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 231

Matches Open- Package Package Name TERR Result Source R? Version persiandictionary noData NA 1 perturb noData NA 2.05 pesticides noData NA 0.1

PET failure NA 0.4.9 pez noData NA 0.9-0

PF failure NA 9.5 pgam noData NA 0.4.12

PGICA failure NA 1 pgirmess noData NA 1.5.9 pglm noData NA 0.1-2 pGLS success NO 0.0-1

PGM2 success YES 1 pgmm noData NA 1.1 pgs noData NA 0.4-0 phalen noData NA 1 phangorn noData NA 1.99-11

PharmPow failure NA 1 phaseR noData NA 1.3

PhaseType timedOut NA 0.1.3 phcfM noData NA 1.2 pheatmap noData NA 0.7.7 phenability noData NA 1 phenex noData NA 1.0-7

PHENIX noData NA 1 phenmod noData NA 1.2-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 232

Matches Open- Package Package Name TERR Result Source R? Version pheno noData NA 1.6 pheno2geno noData NA 1.2.1 phenology noData NA 4

PHeval success YES 0.5.2 phia noData NA 0.1-5 phmm noData NA 0.7-5 phom noData NA 1.0.3 phonR noData NA 0.4-2 phonTools noData NA 0.2-2.0 phreeqc noData NA 1.0-9102 phtt noData NA 3.1.2

PhViD success YES 1.0.6

PhyActBedRest success NO 1 phyclust noData NA 0.1-15 phylin noData NA 1 phylobase noData NA 0.6.8 phyloclim noData NA 0.9-4

PHYLOGR failure NA 1.0.8 phyloland noData NA 1.3 phylolm noData NA 2.2 phylosim noData NA 2.1.1 phylotools noData NA 0.1.2 phyloTop noData NA 1.1.1 phyreg noData NA 0.7

PhysicalActivity success YES 0.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 233

Matches Open- Package Package Name TERR Result Source R? Version physiology noData NA 0.2.2 phytools noData NA 0.4-31 pi0 noData NA 1.3-250 picante noData NA NA picasso noData NA 0.3.0

PIGE failure NA 0.9

PIGShift success NO 1.0.0 pingr noData NA 1.1.0 pipeR noData NA 0.5

PIPS success YES 1.0.1 pitchRx noData NA 1.6

PivotalR failure NA 0.1.17.45 pixmap noData NA 0.4-11

PK failure NA 1.3-2

PKfit cantLoad NA 1.2.4 pkgKitten noData NA 0.1.2 pkgmaker noData NA 0.22

PKgraph cantLoad NA 1.7 pkgutils noData NA 0.6.0

PKI timedOut NA 0.1-1

PKPDmodels success NO 0.3.2

PKreport cantLoad NA 1.5 pks noData NA 0.3-0 plan noData NA 0.4-2 planar noData NA 1.5.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 234

Matches Open- Package Package Name TERR Result Source R? Version planor noData NA 0.2-0

PlayerRatings timedOut NA 1.0-0 playwith noData NA 0.9-54 plfm noData NA 1.1.2 plgp noData NA 1.1-7

PLIS success YES 1.1 plm noData NA 1.4-0 plmDE noData NA 1 plmm noData NA 0.1-1 pln noData NA 0.2-1

PLordprob success YES 1 plot2groups noData NA 0.1 plot3D noData NA 1.0-2 plot3Drgl noData NA 1 plotGoogleMaps noData NA 2.1 plotKML noData NA 0.4-8 plotMCMC noData NA 2.0-0 plotmo noData NA 2.2.1 plotpc noData NA 1.0.3

PlotRegionHighlighter success YES 1 plotrix noData NA 3.5-10 plotROC noData NA 1.2 plotSEMM noData NA 2 plRasch noData NA 1

PLRModels failure NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 235

Matches Open- Package Package Name TERR Result Source R? Version pls noData NA 2.4-3

PLSbiplot1 failure NA 0.1 plsdepot noData NA 0.1.17 plsdof noData NA 0.2-7 plsgenomics noData NA 1.2-6 plspm noData NA 0.4.1 plsRbeta noData NA 0.2.0 plsRcox noData NA 1.7.2 plsRglm noData NA 1.1.1 plugdensity noData NA 0.8-3 plumbr noData NA 0.6.9 plus noData NA 1 plusser noData NA 0.4-0 plyr noData NA 1.8.1

PMA cantLoad NA NA pmcgd noData NA 1.1

PMCMR failure NA 1 pmg noData NA 0.9-43 pmlr noData NA 1 pmml noData NA 1.4.2 pmmlTransformations noData NA 1.2.2 pmr noData NA 1.2.4 png noData NA NA pnmtrem noData NA 1.3 pnn noData NA 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 236

Matches Open- Package Package Name TERR Result Source R? Version pocrm noData NA 0.8 poibin noData NA 1.2

PoiClaClu success YES 1.0.2 poilog noData NA 0.4 pointdensityP noData NA 0.1

PoisNor success YES 1 poisson.glm.mix noData NA 1.2

PoissonSeq success NO 1.1.2 poistweedie noData NA 1 poLCA noData NA NA polidata noData NA 0.1.0 pollstR noData NA 1.1.1 polspline noData NA 1.1.9 polyaAeppli noData NA 2 polyapost noData NA 1.1-6 polyclip noData NA NA polycor noData NA 0.7-8 polyCub noData NA 0.5-1 polynom noData NA 1.3-8

PolynomF failure NA 0.94

PolyPatEx success NO 0.9 polysat noData NA 1.3-3 polySegratio noData NA 0.2-4 polySegratioMM noData NA 0.6-3 polytomous noData NA 0.1.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 237

Matches Open- Package Package Name TERR Result Source R? Version polywog noData NA 0.4-0 pom noData NA 1.1

Pomic failure NA 1.0.2 pomp noData NA 0.53-5 pooh noData NA 0.3 popbio noData NA 2.4 popdemo noData NA 0.1-4

PopED failure NA 0.1.2 popgen noData NA 1.0-3

PopGenKit noData NA 1

PopGenome noExamples NA 2.1.0

PopGenReport timedOut NA 2.1 popgraph noData NA 1.4 popKorn noData NA 0.3-0 poplite noData NA 0.99.5 poppr noData NA 1.1.2 popRange noData NA 1.1.3 popReconstruct noData NA 1.0-4 popsom noData NA 2.3 portes noData NA 2.1-3 portfolio noData NA 0.4-6 portfolioSim noData NA 0.2-7

PortRisk success YES 1 potts noData NA 0.5-2

PottsUtils success YES 0.3-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 238

Matches Open- Package Package Name TERR Result Source R? Version powell noData NA 1.0-0

PoweR cantLoad NA 1.0.4

Power2Stage success NO 0.2-2 powerAnalysis noData NA 0.2 powerGWASinteraction noData NA 1.1.1 poweRlaw noData NA 0.20.5 powerMediation noData NA 0.1.7 powerpkg noData NA 1.5 powerr noData NA 0.1-3 powerSurvEpi noData NA 0.0.6

PowerTOST failure NA 1.2-03

PP failure NA 0.5.3 ppcor noData NA 1 ppiPre cantLoad NA 1.6 ppls noData NA 1.6-1 pps noData NA 0.94

PPtree success YES 2.3.0 pqantimalarials noData NA 0.2 prabclus noData NA 2.2-6 pracma noData NA 1.7.9

PracTools success NO 0.0-2 pragma noData NA 0.1.3 praktikum noData NA 0.1 prc noData NA 2014.11-4 predfinitepop noData NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 239

Matches Open- Package Package Name TERR Result Source R? Version

PredictABEL cantLoad NA 1.2-2

PredictiveRegression success YES 0.1-4 predictmeans noData NA 0.99 predmixcor noData NA 1.1-1 prefmod noData NA 0.8-32

PReMiuM cantLoad NA 3.0.32

PresenceAbsence failure NA 1.1.9 preseqR noData NA 1.0.1

PResiduals cantLoad NA 0.2-0 prettyGraphs noData NA 2.1.5 prettyR noData NA 2.0-8 prettyunits noData NA 1.0.0 prevalence noData NA 0.3.0

PrevMap cantLoad NA 1.1.4 prevR noData NA 2.9 prim noData NA 1.0.15 primer noData NA 1 primerTree noData NA 1.0.1 princurve noData NA 1.1-12 prinsimp noData NA 0.8-8

PRISMA cantLoad NA 0.2-2

PrivateLR success YES 1.2-21 prLogistic noData NA 1.2 prob noData NA 0.9-5 probFDA success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 240

Matches Open- Package Package Name TERR Result Source R? Version

ProbForecastGOP cantLoad NA 1.3.2 probsvm noData NA 1 pROC failure NA 1.7.3

ProDenICA failure NA 1 prodlim noData NA NA

PROFANCY cantLoad NA 1 profdpm noData NA 3.3

ProfessR failure NA 2.3

ProfileLikelihood failure NA 1.1 profileModel noData NA 0.5-9 profileR noData NA 0.2-1 profr noData NA 0.3.1 proftools noData NA 0.1-0

ProgGUIinR success YES 0.0-4 prognosticROC noData NA 0.7 proj4 noData NA 1.0-8

ProjectTemplate failure NA 0.6 propagate noData NA 1.0-4

PropCIs success YES 0.2-5

PropClust timedOut NA 1.4-2 propOverlap noData NA 1

PropScrRand failure NA 1.1 prospectr noData NA 0.1.3 proteomicdesign noData NA 2 proteomics noData NA 0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 241

Matches Open- Package Package Name TERR Result Source R? Version protiq noData NA 1.2 proto noData NA 0.3-10 protoclass noData NA 1 protoclust success YES 1.4

PROTOLIDAR success YES 0.1 protr noData NA 0.5-1 protViz noData NA 0.2.9 proxy noData NA 0.4-13

PRROC success YES 1 pRSR success YES 3.0.2 pryr noData NA 0.1

PSAboot cantLoad NA 1.1

PSAgraphics failure NA 2.1.1 psbcGroup noData NA 1

PSCBS cantLoad NA 0.43.0 pscl noData NA 1.4.6 psd noData NA 0.4-1 psData noData NA 0.1.2 pse noData NA 0.4.0 pseudo noData NA 1.1 psgp noData NA 0.3-6 pSI failure NA 1.1 psidR noData NA 1.2

PSM cantLoad NA 0.8-10 pso noData NA 1.0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 242

Matches Open- Package Package Name TERR Result Source R? Version pspearman noData NA 0.3-0 pspline noData NA NA

PST failure NA 0.84.1

PsumtSim success NO 0.4 psy noData NA 1.1 psych noData NA 1.4.8.11 psychometric noData NA 2.2 psychomix noData NA 1.1-1 psychotools noData NA 0.3-0 psychotree noData NA 0.14-0 psyphy noData NA 0.1-9 psytabs noData NA 0.5 pt noData NA 1

PTAk failure NA 1.2-9

PTE failure NA 1 ptinpoly noData NA 2.4

PtProcess failure NA 3.3-7 ptw noData NA 1.0-7

PubBias failure NA 1 pubmed.mineR noData NA 1.0.3

PubMedWordcloud noExamples NA 0.3.2 pumilioR noData NA 1.3

PurBayes cantLoad NA 1.3 pushoverr noData NA 0.1.4

PVAClone cantLoad NA 0.1-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 243

Matches Open- Package Package Name TERR Result Source R? Version

pvar noData NA 2.2

pvclass noData NA 1.2

pvclust noData NA 1.3-2

PVR success NO 0.2.1

pvsR noData NA 0.3

pwr noData NA 1.1.1

PwrGSD success NO 2

pwt noData NA 7.1-1

pwt8 noData NA 8.0-0

pxR noData NA 0.40.0

pxweb noData NA 0.5.3

pycno noData NA 1.2

pyramid noData NA 1.4

Q / Package Compatibility Details CRAN packages with names beginning with Q tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

qat noData NA 0.73

QCA failure NA 1.1-3

QCA3 failure NA 0.0-7

QCAGUI cantLoad NA 1.9-6

QCAtools failure NA 0.1

qcc noData NA 2.6

QCGWAS success NO 1.0-8

qcr noData NA 0.1-18

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 244

Matches Open- Package Package Name TERR Result Source R? Version qdap noData NA 2.2.0 qdapDictionaries noData NA 1.0.2 qdapRegex noData NA 0.2.0 qdapTools noData NA 1.1.0 qdm noData NA 0.1-0 qgraph noData NA 1.3 qgtools noData NA 1 qiimer noData NA 0.9.2 qlcMatrix noData NA 0.9.2 qLearn noData NA 1 qlspack noData NA 2.2 qmap noData NA 1.0-3 qmethod noData NA 1.2.4 qmrparser noData NA 0.1.5

QoLR failure NA 1 qp noData NA 0.3-2 qpcR noData NA 1.4-0 qPCR.CT noData NA 1.1 qqman noData NA 0.1.2 qqtest noData NA 1 qrfactor noData NA 1.4 qrLMM noData NA 1.0-9

QRM failure NA 0.4-10 qrnn noData NA 1.1.2

QSARdata success YES 1.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 245

Matches Open- Package Package Name TERR Result Source R? Version qtl noData NA NA qtlbim noData NA 2.0.7 qtlbook noData NA 0.18-1 qtlDesign noData NA 0.941 qtlhot noData NA 0.9.0 qtlmt noData NA 0.1-3 qtlnet noData NA 1.3.6

QTLRel failure NA 0.2-14

QuACN failure NA 1.8.0 quad noData NA 1 quadprog noData NA 1.5-5 quadrupen noData NA 0.2-4 qualCI noData NA 0.1

QualInt failure NA 1.0.0 qualityTools noData NA 1.54 qualV noData NA NA

Quandl success YES 2.4.0 quantchem noData NA 0.13 quantification success YES 0.1.0

QuantifQuantile cantLoad NA 1 quantmod noData NA 0.4-3

QuantPsyc failure NA 1.5 quantreg noData NA NA quantregForest noData NA 0.2-3 quantregGrowth noData NA 0.3-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 246

Matches Open- Package Package Name TERR Result Source R? Version

quantspec noData NA 1.0-2

questionr noData NA 0.4.2

queueing noData NA 0.2.3

QUIC success YES 1.1

quint noData NA 1

quipu noData NA 1.9.0

qVarSel noData NA 1

qvcalc noData NA 0.8-8

QZ failure NA 0.1-4

R / Package Compatibility Details CRAN packages with names beginning with R tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

R.cache failure NA 0.10.0

R.devices cantLoad NA 2.12.0

R.filesets timedOut NA 2.6.0

R.huge timedOut NA 0.8.0

R.matlab timedOut NA 3.1.1

R.methodsS3 success MAYBE 1.6.1

R.oo failure NA 1.18.0

R.rsp timedOut NA 0.19.0

R.utils timedOut NA 1.34.0

R0 failure NA 1.2-5

R1magic failure NA 0.2

R2admb failure NA 0.7.10

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 247

Matches Open- Package Package Name TERR Result Source R? Version

R2BayesX failure NA 0.3-1

R2Cuba failure NA 1.0-11 r2d2 noData NA 1.0-0 r2dRue noData NA 1.0.4

R2G2 failure NA 1.0-2

R2GUESS cantLoad NA 1.6

R2HTML failure NA 2.3.1

R2jags cantLoad NA 0.05-01 r2lh noData NA 0.7

R2OpenBUGS failure NA 3.2-2.2

R2STATS cantLoad NA 0.68-38 r2stl noData NA 1.0.0

R2SWF cantLoad NA 0.8-2

R2WinBUGS failure NA 2.1-19

R330 failure NA 1

R4CDISC success NO 0.3

R4CouchDB noExamples NA 0.6 r4ss noData NA 1.22.1

R6 failure NA 2.0.1 race noData NA 0.1.59

RAD failure NA 0.3

RADami cantLoad NA 1.0-3 radar noData NA 1.0.0

RadioSonde failure NA 1.4 radir noData NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 248

Matches Open- Package Package Name TERR Result Source R? Version

RadOnc cantLoad NA 1.0.9

RadTran success YES 1

RAdwords success YES 0.1.1 rags2ridges noData NA 1.4 rainbow noData NA 3.2 raincpc noData NA 0.4 rainfreq noData NA 0.3 rAltmetric noData NA 0.6

RAM cantLoad NA 1.2.0

Rambo success YES 1.1

Ramd failure NA 0.2

RAMP failure NA 1

RAMpath cantLoad NA 0.3.8 ramps noData NA 0.6-12 randaes noData NA 0.3 random noData NA 0.2.3 random.polychor.pa noData NA 1.1.4-1

RandomFields cantLoad NA 3.0.62 randomForest noData NA 4.6-10 randomForestSRC noData NA 1.6.0 randomGLM noData NA 1.02-1 randomizationInference noData NA 1.0.3 randomizeBE noData NA 0.3-1 randomLCA noData NA 1.0-2 randomNames noData NA 0.0-6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 249

Matches Open- Package Package Name TERR Result Source R? Version randomUniformForest noData NA 1.1.2 randtests noData NA 1 randtoolbox noData NA NA

RandVar timedOut NA 0.9.2 rangeMapper noData NA 0.2-8

RankAggreg failure NA 0.5

Rankcluster success YES 0.92.9 rankhazard noData NA 1

RankResponse success YES 3.1.1

RANN failure NA 2.4.1

RAP failure NA 1.1

RapidPolygonLookup success NO 0.1

RAPIDR cantLoad NA 0.1.1

RApiSerialize cantLoad NA NA rappdirs noData NA 0.3 rapport noData NA 0.51 rapportools noData NA 1

RArcInfo failure NA 0.4-12 rareGE noData NA 0.1 rareNMtests noData NA 1.1

Rarity failure NA 1.2-1 rARPACK noData NA 0.7-0

RaschSampler success YES 0.8-7 rasclass noData NA 0.2.1 raster noData NA 2.3-12

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 250

Matches Open- Package Package Name TERR Result Source R? Version rasterVis noData NA 0.32 rateratio.test noData NA 1.0-2 raters noData NA 2.0.1 rationalfun noData NA 0.1-0

RAtmosphere success YES 1.1 rattle noData NA 3.4.1 rAverage noData NA 0.4-10 rAvis noData NA 0.1.2 rawFasta noData NA 1.0.0 rbamtools noData NA 2.10.0 rbefdata noData NA 0.3.5 rbenchmark noData NA 1.0.0 rBeta2009 noData NA 1 rbhl noData NA 0.1.0

RbioRXN cantLoad NA 1.5 rbiouml noData NA 1.5 rbison noData NA 0.4.5

Rbitcoin cantLoad NA 0.9.2 rbitcoinchartsapi noData NA 1.0.4 rbmn noData NA 0.9-2 rbounds noData NA 2.1

RBPcurve cantLoad NA 1.0-20 rbugs noData NA 0.5-9 rbundler noData NA 0.3.7

RCA cantLoad NA 1.4.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 251

Matches Open- Package Package Name TERR Result Source R? Version

RCALI failure NA 0.2-15

Rcapture failure NA 1.4-2 rCarto noData NA 0.8

RCassandra noExamples NA 0.1-3 rcbalance noData NA 1.2 rcdd noData NA 1.1-8 rcdk noData NA 3.3.2 rcdklibs noData NA 1.5.8.4

RCEIM success YES 0.2

Rcell cantLoad NA 1.2-6

Rcgmin timedOut NA 2013-2.21 rChoiceDialogs noData NA 1.0.6 rcicr noData NA 0.2.6

RCircos timedOut NA 1.1.2

RClimMAWGEN cantLoad NA 1.1 rClinicalCodes noData NA 1.0.1 rclinicaltrials noData NA 1.4

Rclusterpp failure NA 0.2.3 rCMA noData NA 1.0.0

Rcmdr cantLoad NA 2.1-5

RcmdrMisc cantLoad NA 1.0-2

RcmdrPlugin.BCA cantLoad NA 0.9-8

RcmdrPlugin.coin cantLoad NA 1.0-22

RcmdrPlugin.depthTools noData NA 1.3

RcmdrPlugin.DoE timedOut NA 0.12-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 252

Matches Open- Package Package Name TERR Result Source R? Version

RcmdrPlugin.doex noData NA 0.2.0

RcmdrPlugin.EACSPIR cantLoad NA 0.2-1

RcmdrPlugin.EBM cantLoad NA 1.0-8

RcmdrPlugin.EcoVirtual cantLoad NA 0.1

RcmdrPlugin.epack noData NA 1.2.5

RcmdrPlugin.EZR cantLoad NA 1.27

RcmdrPlugin.FactoMineR cantLoad NA 1.5-0

RcmdrPlugin.HH cantLoad NA 1.1-42

RcmdrPlugin.IPSUR cantLoad NA 0.2-1

RcmdrPlugin.KMggplot2 cantLoad NA 0.2-0

RcmdrPlugin.lfstat noData NA 0.7

RcmdrPlugin.MA cantLoad NA 0.0-2

RcmdrPlugin.mosaic noData NA 1.0-7

RcmdrPlugin.MPAStats cantLoad NA 1.1.5

RcmdrPlugin.NMBU cantLoad NA 1.8.0

RcmdrPlugin.orloca noData NA 4.1

RcmdrPlugin.plotByGroup noData NA 0.1-0

RcmdrPlugin.pointG cantLoad NA 0.6.6

RcmdrPlugin.qual noData NA 2.2.6

RcmdrPlugin.RMTCJags noData NA 1

RcmdrPlugin.ROC cantLoad NA 1.0-17

RcmdrPlugin.sampling noData NA 1.1

RcmdrPlugin.SCDA noData NA 1

RcmdrPlugin.seeg failure NA 1

RcmdrPlugin.SLC noData NA 0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 253

Matches Open- Package Package Name TERR Result Source R? Version

RcmdrPlugin.SM noData NA 0.3.1

RcmdrPlugin.sos cantLoad NA 0.3-0

RcmdrPlugin.StatisticalURV noData NA 1.0-1

RcmdrPlugin.steepness cantLoad NA 0.3-2

RcmdrPlugin.survival cantLoad NA 1.0-4

RcmdrPlugin.TeachingDemos noData NA 1.0-7

RcmdrPlugin.temis cantLoad NA 0.7.3

RcmdrPlugin.UCA noData NA 1.0-2

RCMIP5 cantLoad NA 1.1

Rcolombos noExamples NA 1.5.0

RColorBrewer failure NA 1.0-5

RConics success YES 1

RCPmod failure NA 1.4

Rcpp failure NA 0.11.3

RcppAnnoy failure NA 0.0.5

RcppArmadillo failure NA 0.4.600.4.0

RcppBDT cantLoad NA 0.2.3 rcppbugs noData NA 0.1.4.1

RcppClassic cantLoad NA 0.9.6

RcppClassicExamples cantLoad NA 0.1.1

RcppCNPy failure NA 0.2.4

RcppDE failure NA 0.1.2

RcppDL failure NA 0.0.5

RcppEigen failure NA 0.3.2.3.0

RcppExamples cantLoad NA 0.1.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 254

Matches Open- Package Package Name TERR Result Source R? Version

RcppGSL failure NA 0.2.4

RcppMLPACK noExamples NA 1.0.10

RcppParallel noExamples NA 4.3.3

RcppProgress noData NA 0.2.1

RcppRedis cantLoad NA 0.1.3

RcppRoll noExamples NA 0.1.0

RcppSMC cantLoad NA 0.1.4

RcppXts failure NA 0.0.4

RcppZiggurat success MAYBE 0.1.2 rcrossref noData NA 0.2.1

RCryptsy success NO 0.2

Rcsdp success NO 0.1.53 rCUR noData NA 1.3

RCurl failure NA 1.95-4.5

Rd2roxygen failure NA 1.5 rda noData NA 1.0.2-2

RDataCanvas failure NA 0.1 rdatamarket noData NA 0.6.5 rdd noData NA 0.56 rDEA noData NA 1.0-2 rdetools noData NA 1

RDIDQ success NO 1

Rdistance success NO 1.1

RDML cantLoad NA 0.4-2 rDNA noData NA 1.30.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 255

Matches Open- Package Package Name TERR Result Source R? Version

Rdpack failure NA 0.4-14 rdrobust noData NA 0.7 rdryad noData NA 0.1.1

RDS cantLoad NA 0.7

Rdsdp success MAYBE 1.0.2

Rdsm noData NA 1.1.0

RDSTK noExamples NA 1.1 rDVR noData NA 0.1.1

ReacTran success NO 1.4.2 readbitmap noData NA 0.1-4 readBrukerFlexData noData NA 1.8.2 reader noData NA 1.0.4 readGenalex noData NA 0.4.1 readMLData noData NA 0.9-7 readMzXmlData noData NA 2.8 readODS noData NA 1.4

RealVAMS success NO 0.3-1 reams noData NA 0.1 rebird noData NA 0.1.1 rebmix noData NA 2.6.2 rebus success YES 0.0-4

RECA timedOut NA 1.1 recalls noData NA 0.1.0 reccsim noData NA 0.9-1

ReCiPa noExamples NA 3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 256

Matches Open- Package Package Name TERR Result Source R? Version recluster noData NA 2.7 recommenderlab noData NA 0.1-5 recommenderlabBX noData NA 0.1-0 recommenderlabJester noData NA 0.1-0 reconstructr noData NA 0.5

RecordLinkage cantLoad NA 0.4-7

Records success YES 1 recosystem noData NA 0.2.4

REdaS failure NA 0.9.2 redcapAPI noData NA 1.1

REDCapR failure NA 0.7-1

REEMtree timedOut NA 0.90.3 ref noData NA 0.99 referenceIntervals noData NA 1.1.1

RefFreeEWAS success NO 1.3 refGenome noData NA 1.3.0

RefManageR failure NA 0.8.45 refset noData NA 0.1.0 refund noData NA 0.1-11 refund.wave noData NA 0.1

RegClust noExamples NA 1 regexr noData NA 1.0.2 registry noData NA 0.2 reglogit noData NA 1.2-2 regpro noData NA 0.1.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 257

Matches Open- Package Package Name TERR Result Source R? Version regress noData NA 1.3-14

RegressionFactory failure NA 0.7.1 regRSM noData NA 0.4 regsubseq noData NA 0.12 regtest noData NA 0.05 rehh noData NA 1.11 rela noData NA 4.1 relaimpo noData NA 2.2-2 relations noData NA 0.6-3 relax noData NA 1.3.15 relaxnet noData NA 0.3-2 relaxo noData NA 0.1-2 reldist noData NA 1.6-3 relevent noData NA 1.0-3

Reliability success NO 0.0-2

ReliabilityTheory timedOut NA 0.1.4 reliaR noData NA 0.01 relimp noData NA 1.0-3 relSim noData NA 0.1-47 relsurv noData NA 2.0-4

RelValAnalysis failure NA 1 remix noData NA 2.1 rEMM noData NA 1.0-8 remMap success NO 0.2-0 remote noData NA 0.3.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 258

Matches Open- Package Package Name TERR Result Source R? Version

Renext failure NA 2.1-0

RenextGUI noExamples NA 1.0-2 rentrez noData NA 0.3.1

Reol failure NA 1.55

ReorderCluster failure NA 1

RepeatedHighDim success YES 2.0.0 repfdr noData NA 1.1 replicationInterval noData NA 0.2 repmis noData NA 0.3.3 repolr noData NA 2

ReporteRs cantLoad NA 0.7.2

ReporteRsjars noData NA 0.0.2 reportr noData NA 1.1.2 reportRx noData NA 1 reports noData NA 0.1.4 reporttools noData NA 1.1.1

REPPlab cantLoad NA 0.9 repra noData NA 0.4.2 represent noData NA 1 reproducer failure NA 0.1.2

REQS noExamples NA 0.8-12 resample noData NA 0.2 resemble noData NA 1.1.1 reshape noData NA 0.8.5 reshape2 noData NA 1.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 259

Matches Open- Package Package Name TERR Result Source R? Version reshapeGUI noData NA 0.1.0

ResistorArray success NO 1.0-28

ResourceSelection failure NA 0.2-4 restlos noData NA 0.1-3 restorepoint noData NA 0.1.5 retimes noData NA 0.1-2 retistruct noData NA 0.5.9 reutils noData NA 0.1.2 revealedPrefs noData NA 0.2 reweight noData NA 1.2.1 rex noData NA 0.2.0 rexpokit noData NA 0.24.1

Rfacebook noExamples NA 0.5 rFDSN noData NA 0.0.0 rFerns noData NA 1.1.0

RFGLS cantLoad NA 1.1 rfigshare noData NA 0.3.6

RFinanceYJ noExamples NA 0.3.1 rfishbase noData NA 0.2-2 rfisheries noData NA 0.1

Rfit failure NA 0.21

RFLPtools failure NA 1.6

RFmarkerDetector cantLoad NA 1 rfoaas noData NA 0.1.1

RFOC timedOut NA 3.3-3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 260

Matches Open- Package Package Name TERR Result Source R? Version

RForcecom noExamples NA 0.7 rfordummies noData NA 0.0-2 rforensicbatwing noData NA 1.3 rfPermute noData NA 1.6.1

RFreak cantLoad NA 0.3-0

RGA cantLoad NA 0.1.4 rgabriel noData NA 0.7 rgam noData NA 0.6.3 rGammaGamma noData NA 1.0.12 rgauges noData NA 0.2.0 rgbif noData NA 0.7.7

RGCCA success NO 2 rgcvpack noData NA 0.1-4 rgdal noData NA 0.9-1

RGENERATE cantLoad NA 1.3

RGENERATEPREC cantLoad NA 1

RGenetics success NO 0.1 rgenoud noData NA NA rgeos noData NA NA rggobi noData NA 2.1.20

RGIFT failure NA 0.1-5 rgl noData NA NA rglobi failure NA 0.2.4

Rglpk success YES 0.6-0

RGoogleAnalytics cantLoad NA 0.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 261

Matches Open- Package Package Name TERR Result Source R? Version

RgoogleMaps failure NA 1.2.0.7 rgp noData NA 0.4-1 rgpui noData NA 0.1-2 rgr noData NA 1.1.10

RGraphics cantLoad NA 2.0-12 rgrs noData NA 0.3

RGtk2 cantLoad NA 2.20.31

RGtk2Extras failure NA 0.6.1

RH2 noExamples NA 0.2.3 rHealthDataGov noData NA 1.0.1

Rhh noData NA 1.0.2 rhosp noData NA 1.06

RhpcBLASctl noExamples NA 0.14-256 rHpcc noData NA 1

RHRV cantLoad NA 4

RHT success YES 1 ri noData NA 0.9

RI2by2 failure NA 1.2 rich noData NA 0.3 ridge noData NA 2.1-3

RidgeFusion success YES 1.0-3

Ridit failure NA 1.1

RIFS success YES 0.1-5

RIGHT cantLoad NA 0.1.2

RImageJROI cantLoad NA 0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 262

Matches Open- Package Package Name TERR Result Source R? Version

RImpala cantLoad NA 0.1.5 rinat noData NA 0.1.4 rindex noData NA 0.12 ringbuffer noData NA 1.1 ringscale noData NA 0.1.2

RInside noData NA 0.2.11

RInSp failure NA 1 rio noData NA 0.1.2 rioja noData NA 0.8-7 ripa noData NA 2.0-2 riskRegression noData NA 1.1.1 risksetROC noData NA 1.0.4 riskSimul noData NA 0.1

RISmed success NO 2.1.2

Ritc success YES 1.0.1 rite noData NA 0.3.4

RItools failure NA 0.1-12 riv noData NA 2.0-4 rivernet noData NA 1 riverplot noData NA 0.3 rivervis noData NA 0.39.4

Rivivc success NO 0.9

RJaCGH failure NA 2.0.3 rjags noData NA NA rJava noData NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 263

Matches Open- Package Package Name TERR Result Source R? Version

RJDBC noExamples NA 0.2-4 rje success NO 1.9 rJPSGCS noData NA 0.2-7

Rjpstatdb failure NA 0.1

RJSDMX cantLoad NA 1.2 rjson success NO 0.2.15

RJSONIO failure NA 1.3-0 rjstat failure NA 0.2 rJython noData NA 0.0-4

RKEA cantLoad NA 0.0-4 rkt success YES 1.3 rkvo noExamples NA 0.1

Rlab failure NA 2.15.1

Rlabkey cantLoad NA 2.1.126 rLakeAnalyzer noData NA 1.4 rlecuyer success YES 0.3-3 rLindo noData NA 8.0.1 rlist failure NA 0.3-2 rlme cantLoad NA 0.4

RLRsim failure NA 3 rLTP success YES 0.1

RM2 success YES 0 rmaf success YES 2

RMallow success YES 1

Rmalschains failure NA 0.2-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 264

Matches Open- Package Package Name TERR Result Source R? Version

RMark cantLoad NA 2.1.9 rmarkdown cantLoad NA 0.4.2 rmatio failure NA 0.11.0

RMAWGEN cantLoad NA 1.3.0

RMC failure NA 0.2

RMediation cantLoad NA 1.1.3 rmeta failure NA 2.16 rmetasim cantLoad NA 2.0.4 rmgarch cantLoad NA 1.2-8 rminer timedOut NA 1.4

Rmisc failure NA 1.5

Rmixmod timedOut NA 2.0.2

RmixmodCombi success YES 1

RMKdiscrete success YES 0.1 rmngb cantLoad NA 0.6-1

RMOA cantLoad NA 1

RMOAjars cantLoad NA 1

RMongo cantLoad NA 0.0.25 rmongodb timedOut NA 1.8.0 rmp success YES 1

Rmpfr cantLoad NA 0.5-7

Rmpi cantLoad NA 0.6-5

RMRAINGEN cantLoad NA 1 rms cantLoad NA 4.2-1 rms.gof success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 265

Matches Open- Package Package Name TERR Result Source R? Version

RMTstat failure NA 0.3

RMySQL cantLoad NA 0.10.1 rnaseqWrapper failure NA 1.0-1

RnavGraph cantLoad NA 0.1.8

RnavGraphImageData success YES 0.0.3 rnbn success YES 1.0.3

RNCBIEUtilsLibs noData NA 0.9

RNCEP cantLoad NA 1.0.7 rncl failure NA 0.2.0

RND failure NA 1.1 rneos success YES 0.2-8

RNetCDF cantLoad NA 1.6.3-1

RNetLogo cantLoad NA 1.0-1

RNeXML cantLoad NA 2.0.1 rngSetSeed failure NA 0.3-2 rngtools timedOut NA 1.2.4 rngWELL success YES 0.10-3 rngwell19937 failure NA 0.6-0

RNiftyReg cantLoad NA 1.1.2 rnoaa cantLoad NA 0.3.3 rNOMADS noData NA 2.0.4 rnrfa success MAYBE 0.1.5

ROAuth cantLoad NA 0.9.5

RobAStBase cantLoad NA 0.9 robCompositions cantLoad NA 1.9.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 266

Matches Open- Package Package Name TERR Result Source R? Version robcor failure NA 0.1-6 robeth failure NA 2.7 robfilter cantLoad NA 4.1

RobLox cantLoad NA 0.9

RobLoxBioC cantLoad NA 0.9

RobPer cantLoad NA 1.2

RobRex failure NA 0.9

RobRSVD success YES 1

RObsDat cantLoad NA 14.12 robumeta failure NA 1.5 robust cantLoad NA 0.4-16

RobustAFT cantLoad NA 1.3 robustbase cantLoad NA 0.92-2 robustDA success YES 1.1 robustfa cantLoad NA 1.0-5 robustgam success NO 0.1.7 robustHD cantLoad NA 0.5.0 robustlmm cantLoad NA 1.6 robustloggamma failure NA 0.4-28

RobustRankAggreg success YES 1.1 robustreg success YES 0.1-7 robustvarComp cantLoad NA 0.1-2 robustX failure NA 1.1-4

ROC632 failure NA 0.6 rocc success NO 1.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 267

Matches Open- Package Package Name TERR Result Source R? Version rockchalk timedOut NA 1.8.86

RockFab cantLoad NA 1.2 rococo success YES 1.1.2

ROCR cantLoad NA 1.0-5

ROCt failure NA 0.8

ROCwoGS success YES 1

RODBC fatalError NA 0.2.3

RODBCext cantLoad NA 0.2.3 rodd success MAYBE 0.1-1

RODM cantLoad NA 1.1

ROI noData NA 0.1-0

ROI.plugin.glpk noData NA 0.0-2

ROI.plugin.quadprog noData NA 0.0-2

ROI.plugin.symphony noData NA 0.0-2

Rook success MAYBE 1.1-1

RootsExtremaInflections success YES 1 rootSolve cantLoad NA NA ropensecretsapi success YES 1.0.1

ROptEst cantLoad NA 0.9

ROptEstOld cantLoad NA 0.9.2

ROptRegTS cantLoad NA 0.9.1 ror timedOut NA 1.2 rorutadis success YES 0.1.3

ROSE success NO 0.0-3 rotations cantLoad NA 1.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 268

Matches Open- Package Package Name TERR Result Source R? Version

Rothermel cantLoad NA 1.2 roughrf success MAYBE 1

RoughSetKnowledgeReduction success NO 0.1

RoughSets failure NA 1.1-0 rowr success MAYBE 1.1.1 roxygen2 failure NA 4.1.0 royston failure NA 1

RPANDA cantLoad NA 1 rpanel timedOut NA 1.1-3 rpart failure NA 4.1-8 rpart.plot failure NA 1.5.1 rpart.utils success YES 0.5 rpartitions success NO 0.1 rpartScore success YES 1.0-1

RPCLR success YES 1

Rpdb cantLoad NA 2.2 rpf cantLoad NA 0.44 rpg cantLoad NA 1.2 rphast failure NA 1.6

Rphylip success MAYBE 0.1-23 rPlant noData NA 2.7 rplexos cantLoad NA 0.11 rplos noExamples NA 0.4.6 rplotengine success YES 1.0-5

RPMG failure NA 2.1-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 269

Matches Open- Package Package Name TERR Result Source R? Version

RPMM success YES 1.2 rportfolios success YES 1

RPostgreSQL success YES 0.4 rPref noData NA 0.4 rprintf failure NA 0.1-2

RProtoBuf cantLoad NA 0.4.2 rpsychi timedOut NA 0.8 rpubchem noExamples NA 1.5.0.2

RPublica cantLoad NA 0.1.2

RPushbullet success YES 0.1.1

RQDA cantLoad NA 0.2-7 rqPen success YES 1

Rquake cantLoad NA 2.2

RQuantLib failure NA 0.4.0

Rramas success YES 0.1-4 rrBLUP success YES 4.3 rrBlupMethod6 success YES 1.3 rrcov cantLoad NA 1.3-8 rrcovHD cantLoad NA 0.2-3 rrcovNA cantLoad NA 0.4-7

Rrdrand success YES 0.1-10 rredis cantLoad NA NA

RRF cantLoad NA NA rriskDistributions failure NA 2 rrlda failure NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 270

Matches Open- Package Package Name TERR Result Source R? Version

RRreg success YES 0.2.0 rrules success YES 0.1-0

RSA cantLoad NA 0.9.6

RSADBE success YES 1 rsae cantLoad NA 0.1-5

RSAGA failure NA 0.93-6 rSCA noData NA 2.1

RSclient noExamples NA 0.7-2 rscproxy noData NA 2.0-5

RSDA cantLoad NA 1.2 rsdepth success YES 0.1-5 rsdmx cantLoad NA 0.4-4

RSeed failure NA 0.1.31 rseedcalc failure NA 1.2

RSEIS cantLoad NA NA

RSelenium cantLoad NA 1.3.5 rsem cantLoad NA 0.4.5

Rserve noExamples NA 1.7-3 rSFA noData NA 1.04 rsgcc success MAYBE 1.0.6

RSGHB success YES 1.0.2

RSiena timedOut NA 1.1-232 rsig cantLoad NA 1

RsimMosaic failure NA 1.0.2

RSiteCatalyst cantLoad NA 1.4.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 271

Matches Open- Package Package Name TERR Result Source R? Version

RSKC success NO 2.4.1 rsm timedOut NA 2.07 rsml cantLoad NA 1.2

RSNNS cantLoad NA NA rsnps cantLoad NA 0.1.0

RSNPset cantLoad NA 0.3

RSofia cantLoad NA 1.1

Rsolnp success YES 1.15

Rsomoclu success YES 1.4.1 rspa cantLoad NA 0.1-6 rSPACE noData NA 1.0.4 rspear failure NA 0.1-2 rsprng success NO 1

RSQLite failure NA 1.0.0

RSQLServer cantLoad NA 0.1.1

Rssa timedOut NA 0.11 rstackdeque timedOut NA 1.1

RStars cantLoad NA 1 rstiefel failure NA 0.1

RStorm success NO 0.902 rstream failure NA 1.3.2 rstudioapi success YES 0.2 rsubgroup cantLoad NA 0.6

Rsundials success YES 1.6 rsunlight cantLoad NA 0.3.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 272

Matches Open- Package Package Name TERR Result Source R? Version

RSurveillance success NO 0.1.0

RSurvey cantLoad NA 0.8-2

Rsymphony success YES 0.1-18 rSymPy noData NA 0.2-1.1 rtape success YES 2.2

RTConnect success NO 0.1.4

RTDE failure NA 0.1-0 rtdists cantLoad NA 0.2-6 rtematres cantLoad NA 0.2 rTensor noData NA 1.2

RTextTools cantLoad NA 1.4.2

RTextureMetrics success YES 1.1 rtf failure NA 0.4-11 rtfbs timedOut NA 0.3.3 rtiff failure NA 1.4.4 rtkpp success MAYBE 0.8.4

RTOMO failure NA 1.1-2 rtop cantLoad NA 0.3-45

RTriangle success YES 1.6-0.6 rts failure NA 1.0-3

Rtsne success YES 0.9

Rttf2pt1 success YES 1.3.3 rtype failure NA 0.1-1

Ruchardet failure NA 0.0-3 rucm failure NA 0.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 273

Matches Open- Package Package Name TERR Result Source R? Version rugarch cantLoad NA 1.3-4 rUnemploymentData noData NA 1.0.0

RUnit success NO 0.4.28

Runiversal success YES 1.0.2 runjags failure NA 1.2.1-0

Runuran cantLoad NA 0.21.0

RunuranGUI failure NA 0.1 ruv success YES 0.9.4 rv failure NA 2.3.1

RVAideMemoire timedOut NA 0.9-41 rvalues failure NA 0.2

Rvcg success NO 0.10.1 rvertnet cantLoad NA 0.2.2 rvest failure NA 0.2.0 rvgtest cantLoad NA NA rvHPDT cantLoad NA 3

RVideoPoker success YES 0.3

Rvmmin timedOut NA 2013-11.12

RVsharing failure NA 1.1.0 rvTDT cantLoad NA 1

RVtests success YES 1.2

Rwave cantLoad NA NA rWBclimate noData NA 0.1.3

RWBP timedOut NA 1

RWeather noExamples NA 0.4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 274

Matches Open- Package Package Name TERR Result Source R? Version

RWebLogo success YES 1.0.3

RWeka cantLoad NA 0.4-24

RWekajars noData NA 3.7.12-1

RWiener success YES 1.2-0

Rwinsteps success MAYBE 1.0-1

rworldmap cantLoad NA 1.3-1

rworldxtra success YES 1.01

rwt success YES 1.0.0

RxCEcolInf cantLoad NA 0.1-3

RXKCD success YES 1.7-5

RXMCDA timedOut NA 1.5.3

RXshrink success YES 1.0-8

Ryacas failure NA 0.2-12.1

RYoudaoTranslate success YES 1

ryouready success NO 0.3

rYoutheria noData NA 1.0.0

rysgran failure NA 2.1.0

Rz cantLoad NA 0.9-1

S / Package Compatibility Details CRAN packages with names beginning with S tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

s20x failure NA 3.1-11

s2dverification failure NA 2.1.1

s4vd success NO 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 275

Matches Open- Package Package Name TERR Result Source R? Version sac success NO 1.0.1 saccades success NO 0.1 sads cantLoad NA 0.1.10 sae success NO 1.0-2 sae2 success NO 0.1-1 saemix failure NA 1.2 saery success YES 1 saeSim cantLoad NA 0.6.0

SAFD success YES 0.4 safeBinaryRegression success YES 0.1-3 safi failure NA 1

SAM success MAYBE 1.0.5

Sample.Size success YES 1

SamplerCompare cantLoad NA 1.2.5 sampleSelection failure NA 1.0-2 samplesize4surveys success NO 2.1.0

SampleSizeMeans success NO 1.1

SampleSizeProportions success YES 1 sampling cantLoad NA NA samplingbook failure NA 1.2.0 samplingEstimates success NO 0.1-3

SamplingStrata timedOut NA 1.0-3 samplingVarEst success YES 0.9-9 sampSurf cantLoad NA 0.7-2 samr timedOut NA 2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 276

Matches Open- Package Package Name TERR Result Source R? Version

SAMURAI failure NA 1.2.1 sand cantLoad NA 1.0.2 sandwich failure NA 2.3-2 sanitizers success YES 0.1.0 sanon success NO 1.4 sapa failure NA 2.0-0

SAPP success NO 1.0.4 saps cantLoad NA 1.0.0 sas7bdat success YES 0.5

SAScii failure NA 1

SASmixed timedOut NA 1.0-4

SASPECT success YES 0.1-1

SASxport timedOut NA 1.5.0

SAVE noExamples NA 0.9.3.9.2 saves noExamples NA 0.5 saws timedOut NA 0.9-6.1 sBF success YES 1.1.1 sbgcop success NO 0.975 sbioPN success YES 1.1.0

SBRect cantLoad NA 0.26

SBSA success YES 0.2.3 sca timedOut NA 0.8-9 scagnostics cantLoad NA 0.2-4 scales failure NA 0.2.4 scalreg success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 277

Matches Open- Package Package Name TERR Result Source R? Version scam failure NA 1.1-8 scape success YES 2.2-0 scar failure NA 0.2-1 scaRabee cantLoad NA 1.1-3 scatterplot3d failure NA 0.3-35

SCBmeanfd success NO 1.1

SCEPtER failure NA 0.2-1

SCEPtERbinary failure NA 0.1-1

SCGLR cantLoad NA 2.0.1 scholar failure NA 0.1.2 schoolmath success YES 0.4 schoRsch success NO 1.1 schwartz97 failure NA 0.0.6

SCI failure NA 1.0-1 scidb cantLoad NA 1.1-2

SciencesPo cantLoad NA 0.11.21 scio success YES 0.6.1 sciplot success NO 1.1-0

SciViews failure NA 0.9-5

SCMA success YES 1.1.1

ScoreGGUM success YES 1

SCORER2 success YES 0.99.0 scoring failure NA 0.5-1

ScottKnott failure NA 1.2-5 scout timedOut NA 1.0.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 278

Matches Open- Package Package Name TERR Result Source R? Version

SCperf failure NA 1

ScrabbleScore success YES 1 scrapeR failure NA 0.1.6

ScreenClean timedOut NA 1.0.1 scrime noExamples NA 1.3.3 scriptests failure NA 1.0-9 scrm failure NA 1.3-3

SCRT success YES 1.1.1 scrypt success YES 0.1.0 scuba success NO 1.7-0

SCVA success YES 1.1.1 sda cantLoad NA 1.3.5

SDaA failure NA 0.1-3 sdcMicro cantLoad NA 4.4.0 sdcMicroGUI cantLoad NA 1.1.1 sdcTable cantLoad NA 0.17.1 sdcTarget failure NA 0.9-11

SDD cantLoad NA 1.1 sddpack success YES 0.9 sde success NO 2.0.13 sdef success NO 1.5

SDMTools success NO 1.1-221 sdmvspecies cantLoad NA 0.3.1 sdnet success MAYBE 2.03.3 sdprisk cantLoad NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 279

Matches Open- Package Package Name TERR Result Source R? Version sdtoolkit success NO 2.33-1 sdwd success NO 1.0.1

SE.IGE success YES 1 seacarb success NO 3.0.5 sealasso success YES 0.1-2

SearchTrees success NO 0.5.2 seas cantLoad NA 0.4-3

SEAsic success YES 0.1 season cantLoad NA 0.3-5 seasonal failure NA 0.70.1 seawaveQ failure NA 1.0.0

SEchart failure NA 0.1

SECP success NO 0.1-4 secr cantLoad NA 2.9.3 secrdesign cantLoad NA 2.2.2 secrlinear cantLoad NA 1.0.5 seedy failure NA 1 seeg failure NA 1 seem success YES 1

SEER2R success YES 1

SEERaBomb success YES 2014.4.1 seewave failure NA 1.7.6 seg cantLoad NA 0.5-1 segmag failure NA 1.2.2 segmented failure NA 0.5-1.0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 280

Matches Open- Package Package Name TERR Result Source R? Version

Segmentor3IsBack success NO 1.8

Sejong noData NA 0.01

SEL failure NA 1.0-2 selectiongain success YES 2.0.40 selectMeta noExamples NA 1.0.7 selectr failure NA 0.2-3 selectspm cantLoad NA 0.1

SeleMix failure NA 0.9.1 selfingTree failure NA 0.2

SelvarMix success YES 1 sem cantLoad NA NA semdiag noExamples NA 0.1.2 semGOF success YES 0.2-0 semiArtificial cantLoad NA 1.2.0

SemiCompRisks success YES 1

SEMID failure NA 0.1

SemiMarkov success NO 1.4

SemiPar failure NA 1.0-4.1

SemiParBIVProbit cantLoad NA 3.2-13.2

SemiParSampleSel cantLoad NA 1.2 semisupKernelPCA success MAYBE 0.1.5

SEMModComp success YES 1 semPlot cantLoad NA 1.0.1 semPLS failure NA 1.0-10 semTools failure NA 0.4-6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 281

Matches Open- Package Package Name TERR Result Source R? Version sendmailR success YES 1.2-1 sendplot failure NA 4.0.0 sensitivity cantLoad NA NA

SensitivityCaseControl success YES 2.1 sensitivitymv success YES 1.2 sensitivitymw success YES 1.1 sensitivityPStrat failure NA 1.0-6

SensoMineR failure NA 1.2 sensory cantLoad NA 1 sensR timedOut NA 1.4-5

SenSrivastava success NO 2012-04-0 separationplot failure NA 1 seqCBS failure NA 1.2 seqDesign success NO 1.0.2

SeqFeatR cantLoad NA 0.1.5

SeqGrapheR cantLoad NA 0.4.8.3 seqinr cantLoad NA NA seqMeta cantLoad NA 1.5 seqminer timedOut NA 3.4 seqmon success YES 0.2 seqPERM noExamples NA 1 seqRFLP success YES 1.0.1 sequences failure NA 0.5.9

Sequential success YES 1.1 sequenza cantLoad NA 2.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 282

Matches Open- Package Package Name TERR Result Source R? Version seriation cantLoad NA NA servr cantLoad NA 0.1 sesem cantLoad NA 1.0.1 session success NO 1.0.3

SetMethods failure NA 1 setRNG failure NA 2013.9-1 sets failure NA 1.0-13 settings failure NA 0.1.1 severity success YES 2 sExtinct success YES 1.1 sfa failure NA 1.0-1 sfsmisc failure NA 1.0-27 sft failure NA 2.0-7

SGCS cantLoad NA 2 sgeostat success NO 1.0-25

SGL success YES 1.1 sglasso success YES 1.1-0 sglOptim failure NA 1.0.122.1 sglr cantLoad NA 0.7 sgof timedOut NA 2.1.1

SGP cantLoad NA 1.2-0.0 sGPCA failure NA 1

SGPdata noData NA 8.0-0.0 sgr failure NA 1.3 shape success NO 1.4.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 283

Matches Open- Package Package Name TERR Result Source R? Version shapefiles noExamples NA 0.7 shapes cantLoad NA 1.1-10

SharpeR timedOut NA 0.1501 sharpshootR cantLoad NA 0.6-3 sharx cantLoad NA 1.0-4 shiny cantLoad NA 0.11 shinyAce cantLoad NA 0.1.0 shinybootstrap2 cantLoad NA 0.2 shinyBS cantLoad NA 0.2 shinyFiles cantLoad NA 0.4.0 shinyRGL cantLoad NA 0.1.0 shinythemes cantLoad NA 1

SHIP success YES 1.0.2 shopifyr cantLoad NA 0.28 shotGroups cantLoad NA 0.6 showtext cantLoad NA 0.2 shp2graph cantLoad NA 0-2 shrink failure NA 1.2.0

ShrinkCovMat success YES 1.1.0 shuffle success MAYBE 1 siar noExamples NA 4.2 sideChannelAttack cantLoad NA 1.0-6 sidier cantLoad NA 3 sievetest failure NA 1.2.2 sig timedOut NA 0.0-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 284

Matches Open- Package Package Name TERR Result Source R? Version sigclust success YES 1.1.0

SightabilityModel success NO 1.3 sigloc success NO 0.0.4 signal failure NA 0.7-4 signal.hsmm cantLoad NA 1.1

SII failure NA 1.0.3

Sim.DiffProc cantLoad NA 2.9 simba failure NA 0.3-5 simboot success YES 0.2-5

SimComp failure NA 2.2

SimCorMultRes cantLoad NA 1.3.0 simctest failure NA 2.4 simecol cantLoad NA 0.8-4 simex failure NA 1.5 simexaft success NO 1.0.7 simFrame failure NA 0.5.3

Simile failure NA 1.3

SIMMS failure NA 0.0.1 simMSM timedOut NA 1.1.2 simone failure NA 1.0-2 simPH cantLoad NA 1.2.4 simpleboot success NO 1.1-3

SimpleTable cantLoad NA 0.1-2 simplexreg failure NA 1

SimplicialCubature failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 285

Matches Open- Package Package Name TERR Result Source R? Version simPop cantLoad NA 0.2.9

Simpsons noExamples NA 0.1.0

SimRAD cantLoad NA 0.95 simrel cantLoad NA 1.0-1 simsalapar failure NA 1.0-5 simsem cantLoad NA 0.5-8

SimSeq cantLoad NA 1.2.0 simSummary cantLoad NA 0.1.0 simTool failure NA 1.0.3

SimuChemPC cantLoad NA 1.3

SimultAnR success NO 1.1

SIN success YES 0.6

SINGLE cantLoad NA 1.3 siplab cantLoad NA 1.1 sirad success YES 2.0-7 siRSM noExamples NA 1.1 sirt cantLoad NA 1.3

SIS cantLoad NA 0.7-4 sisus cantLoad NA 3.9-13 sisVIVE success YES 1 sitar failure NA 1.0.1 sitools success YES 1.4

SixSigma cantLoad NA 0.8-1

SiZer failure NA 0.1-4 sjdbc success MAYBE 1.5.0-71

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 286

Matches Open- Package Package Name TERR Result Source R? Version sjPlot failure NA 1.6.5

SKAT cantLoad NA 1.0.1 skatMeta failure NA 1.4.3 skda failure NA 0.1

SkewHyperbolic failure NA 0.3-2 skewt success YES 0.1

Skillings.Mack success MAYBE 1.0-2 skmeans failure NA 0.2-6 sla success NO 0.1 slackr cantLoad NA 1.2 slam cantLoad NA NA

SLC success YES 0.3 sld cantLoad NA 0.3

Sleuth2 failure NA 1.0-7

Sleuth3 failure NA 0.1-6 slfm success YES 0.1

SLHD success YES 1.2-1 slp success YES 1.0-3 sm timedOut NA 2.2-5.4 smaa failure NA 0.2-3 smac success NO 1 smacof cantLoad NA 1.5-0 smacpod cantLoad NA 1.1.1 smam success YES 0.2-2 smart cantLoad NA 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 287

Matches Open- Package Package Name TERR Result Source R? Version

SmarterPoland noData NA 1.2 smatr failure NA 3.4-3

SMC timedOut NA 1.1 smco success YES 0.1

SMCP success YES 1.1.3

SMCRM success YES 0.0-3 smcure success NO 2 smcUtils failure NA 0.2.2 smdata success YES 1.1 smdc failure NA 0.0.2 sme failure NA 0.8

SMFI5 failure NA 1 smfsb timedOut NA 1.1

SMIR failure NA 0.02 smirnov success YES 1.0-1

SmithWilsonYieldCurve success YES 1.0.1

SML failure NA 0.1

SMNCensReg noData NA 2.4 smnet cantLoad NA 1 smoother failure NA 1.0.0.0

SmoothHazard success MAYBE 1.2.3 smoothHR success YES 1.0.1 smoothie success YES 1.0-1 smoothmest failure NA 0.1-2 smoothSurv success NO 1.3-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 288

Matches Open- Package Package Name TERR Result Source R? Version smoothtail cantLoad NA 2.0.3

SMPracticals cantLoad NA 1.4-2

SMR success YES 2.0.1 sms failure NA 2.3 smss success NO 1.0-1

SMVar success NO 1.3.3 sn failure NA 1.1-2 sna cantLoad NA NA snapshot noExamples NA 0.1.2

SNFtool failure NA 2.2 snht success MAYBE 1.0.1 snipEM noExamples NA 1 snow fatalError NA 0.3-13

SnowballC cantLoad NA NA snowfall noExamples NA 1.84-6 snowFT failure NA 1.3-0 snp.plotter noExamples NA 0.5.1 snpar success YES 1

SNPassoc failure NA 1.9-2 snpEnrichment cantLoad NA 1.6.0 snplist failure NA 0.13

SNPmaxsel failure NA 1.0-3

SNPMClust success NO 1 snpRF success YES 0.4

SNPtools failure NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 289

Matches Open- Package Package Name TERR Result Source R? Version sns success YES 0.9.1

SNSequate failure NA 1.1-1

SOAR timedOut NA 0.99-11 soc.ca success NO 0.7.1

SocialMediaMineR cantLoad NA 0.1

SocialNetworks cantLoad NA NA

SocialPosition success YES 1

SOD failure NA 1

SoDA failure NA 1.0-6

SODC success YES 1 softclassval failure NA 1.0-20130317

SoftClustering success NO 0.14.02 softImpute success NO 1 soil.spec cantLoad NA 2.1.4 soilDB success YES 1.3-2 soilphysics timedOut NA 2 soilprofile failure NA 1

SoilR cantLoad NA 1.1-23 soiltexture failure NA 1.2.19 soilwater success YES 1.0.1 solaR failure NA 0.38

SOLOMON noExamples NA 1.0-1 solr noExamples NA 0.1.4 som cantLoad NA NA soma success YES 1.1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 290

Matches Open- Package Package Name TERR Result Source R? Version somebm success YES 0.1 someKfwer success YES 1.2 someMTP failure NA 1.4.1 somplot success YES 1.6.4 sonicLength failure NA 1.4.4 soobench success YES 1.0-73

SOR success MAYBE 0.22

SortableHTMLTables success YES 0.1-3 sortinghat cantLoad NA 0.1 sorvi cantLoad NA 0.6.23 sos failure NA 1.3-8 sos4R cantLoad NA 0.2-11 sotkanet cantLoad NA 0.9.03 soundecology failure NA 1.2

SoundexBR timedOut NA 1.1 source.gist noData NA 1.0.0 sp failure NA 1.0-16 sp23design success YES 0.9 spa success YES 2

SPA3G success YES 1 spaa success YES 0.2.1 space timedOut NA 0.1-1

SPACECAP success NO 1.1.0 spaceExt timedOut NA 1 spacejam failure NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 291

Matches Open- Package Package Name TERR Result Source R? Version spacetime cantLoad NA 1.1-3 spacodiR failure NA 0.13.0115 spacom cantLoad NA 1.0-4 spam cantLoad NA NA spaMM cantLoad NA 1.4.1 spanr timedOut NA 1

SPAr success NO 0.1 sparc success YES 0.9.0 sparcl timedOut NA 1.0.3 spareserver success YES 1.0.0 spark failure NA 1.0.0 sparkTable cantLoad NA 0.12.0 sparktex success NO 0.1

SPARQL noExamples NA 1.16 sparr cantLoad NA 0.3-6 sparseBC success NO 1 sparsediscrim cantLoad NA 0.2

SparseGrid success NO 0.8.2 sparseHessianFD noExamples NA 0.1.1 sparseLDA success MAYBE 0.1-6 sparseLTSEigen cantLoad NA 0.2.0

SparseM cantLoad NA NA sparseMVN success YES 0.1.0 sparsenet cantLoad NA 1.2 sparseSEM success YES 2.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 292

Matches Open- Package Package Name TERR Result Source R? Version

SparseTSCGM cantLoad NA 2.1.1 spartan success YES 2.1 spatcounts success YES 1.1 spate success NO 1.4 spatgraphs success MAYBE 2.62 spatial success YES 7.3-8 spatial.gev.bma cantLoad NA 1 spatial.tools cantLoad NA 1.4.8 spatialCovariance failure NA 0.6-8

SpatialEpi cantLoad NA 1.2.1

SpatialExtremes cantLoad NA 2.0-0 spatialkernel success YES 0.4-19 spatialnbda success YES 1

SpatialNP success YES 1.1-1

SpatialPack failure NA 0.2-3 spatialprobit cantLoad NA 0.9-10 spatialsegregation cantLoad NA 2.4 spatialTailDep cantLoad NA 1.0.2

SpatialTools failure NA 0.5.8

SpatialVx cantLoad NA 0.2-2

SpatioTemporal cantLoad NA 1.1.7

SpatPCA cantLoad NA 1 spatstat cantLoad NA 1.40-0 spatsurv cantLoad NA 0.9-8 spBayes noData NA 0.3-8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 293

Matches Open- Package Package Name TERR Result Source R? Version spBayesSurv noExamples NA 1.0.2 spc cantLoad NA NA spca failure NA 0.6.0 spcadjust success NO 0.1-3 spcosa cantLoad NA 0.3-5 spcov success YES 1.01 spcr success YES 1.2.1 spd success YES 2.0-0 spdep cantLoad NA NA spdynmod noExamples NA 1 spe success YES 1.1.2 speaq failure NA 1.2.0 speccalt success NO 0.1.1

SPECIES success YES 1

SpeciesMix timedOut NA 0.3.1 specificity success YES 0.1.1

SpecsVerification success YES 0.3-0 spectral.methods cantLoad NA 0.7.2.125 spectralGP failure NA 1.3.2 speedglm success NO 0.2-1.0 speff2trial success YES 1.0.4

SPEI failure NA 1.6 sperich failure NA 1.5-5 sperrorest failure NA 0.2-1 spfrontier cantLoad NA 0.1.12

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 294

Matches Open- Package Package Name TERR Result Source R? Version spgrass6 success YES 0.8-6 spgwr failure NA 0.6-26 sphereplot failure NA 1.5

SphericalCubature failure NA 1.0.1

SphericalK success YES 1

SpherWave cantLoad NA 1.2.2 sphet cantLoad NA 1.6 spi success NO 1.1

SPIAssay success NO 1.0.0 spider cantLoad NA 1.3-0 spiders failure NA 1 spikeslab success YES 1.1.5 spikeSlabGAM cantLoad NA 1.1-8

SPIn success YES 1.1 splancs cantLoad NA NA splitstackshape cantLoad NA 1.4.2 splm cantLoad NA 1.3-7 spls success NO 2.2-1 splus2R cantLoad NA NA splusTimeDate failure NA 2.5.0-135 splusTimeSeries failure NA 1.5.0-73 spMC timedOut NA 0.3.6

SPmlficmcm success YES 1.3

SPMS success YES 2 spnet failure NA 0.9.0.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 295

Matches Open- Package Package Name TERR Result Source R? Version spocc cantLoad NA 0.2.4

SPODT success NO 0.9-1 sporm success YES 1.1

SportsAnalytics failure NA 0.2

SPOT timedOut NA 1.0.4184

SPREDA failure NA 1 sprinter success NO 1.1.0 sprm cantLoad NA 1.1 sprsmdl success YES 0.1-0

SPSL success YES 0.1-8 spsmooth failure NA 1.1-3 spsurvey cantLoad NA 2.6 spt success YES 1.13-8-8 spThin noData NA 0.1.0 spTimer failure NA 2.0-0 sptm failure NA 14.10-11 spuRs success NO 2.0.0

SQDA success YES 1 sqldf success NO 0.4-10 sqliter noExamples NA 0.1.0 sqlshare cantLoad NA 1.0.3 sqlutils failure NA 1.2

SQN success YES 1.0.5

SQUAREM failure NA 2014.8-1 squash failure NA 1.0.6

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 296

Matches Open- Package Package Name TERR Result Source R? Version sra failure NA 0.1.1

SRCS failure NA 1 srd success YES 1 sROC failure NA 0.1-2

SRRS cantLoad NA 0.1.1 ss3sim failure NA 0.8.2 ssanv failure NA 1.0-2 ssd failure NA 0.3

SSDforR failure NA 1.4.8 sse failure NA 0.5-1 ssfit success YES 1.1 ssmrob cantLoad NA 0.4

SSN cantLoad NA 1.1.4 sspline success YES 0.1-6

SSrat cantLoad NA 1 sss failure NA 0.0-11

SSsimple success YES 0.6.4 ssvd success YES 1 ssym failure NA 1.5.2 st cantLoad NA 1.2.3 stab success YES 0.1.9 stabledist failure NA 0.6-6

StableEstim success NO 2 stabs failure NA 0.5-1

Stack cantLoad NA 2.0-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 297

Matches Open- Package Package Name TERR Result Source R? Version stacomirtools success NO 0.3 stam noExamples NA 0.0-1

StAMPP cantLoad NA 1.3

StandardizeText failure NA 1

STAR failure NA 0.3-7 stargazer failure NA 5.1 startupmsg failure NA 0.9 stashR cantLoad NA 0.3-5

Stat2Data success YES 1.6 statar cantLoad NA 0.1.3 statcheck success YES 1.0.0

StatDA cantLoad NA 1.6.7

StatDataML success YES 1.0-25 statebins cantLoad NA 1 statfi success NO 0.9.8

StatMatch noData NA 1.2.2

StatMethRank cantLoad NA 1 statmod cantLoad NA NA statnet cantLoad NA 2014.2.0 statnet.common failure NA 3.2.2

Statomica success NO 1

StatRank failure NA 0.0.4 steepness cantLoad NA NA stellaR failure NA 0.3-3

Stem failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 298

Matches Open- Package Package Name TERR Result Source R? Version

STEPCAM cantLoad NA 1 stepp failure NA 3.0-11 stepPlr success YES 0.92 stepwise success NO 0.3

StereoMorph cantLoad NA 1.2.1 stilt cantLoad NA 1.0.1 stima failure NA 1.1 stinepack success YES 1.3 stm cantLoad NA 1.0.8

StMoSim noExamples NA 3 stocc cantLoad NA 1.23

StochKit2R noExamples NA 0.2 stochprofML failure NA 1.2 stochvol failure NA 0.9-0 stockPortfolio success YES 1.2 stoichcalc failure NA 1.1-3

Storm success YES 1.2 stosim cantLoad NA 0.0.12

STPGA success YES 1 stpp cantLoad NA 1.0-5 stppResid failure NA 1.1

StrainRanking failure NA 1.1 strap success NO 1.4 strataG cantLoad NA 0.9.2 stratification success NO 2.2-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 299

Matches Open- Package Package Name TERR Result Source R? Version stratigraph success NO 0.66

StratSel cantLoad NA 1.1 straweib success NO 1 stream cantLoad NA 1.1-1

StreamMetabolism failure NA 1 streamMOA cantLoad NA 1.0-0 streamR cantLoad NA 0.2.1 stremo success NO 0.2 stressr failure NA 1.0.0

StressStrength success YES 1.0.1 stringdist timedOut NA 0.9.0 stringi cantLoad NA NA stringr failure NA 0.6.2 strucchange failure NA 1.5-0 structSSI cantLoad NA 1.1 strum cantLoad NA 0.5 strvalidator cantLoad NA 1.4.0 stsm failure NA 1.7 stsm.class failure NA 1.3 stylo cantLoad NA 0.5.8-2

SubCultCon failure NA 1 subgroup failure NA 1.1

SubLasso success YES 1 subplex cantLoad NA NA subrank failure NA 0.9.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 300

Matches Open- Package Package Name TERR Result Source R? Version subselect timedOut NA 0.12-4 subsemble noExamples NA 0.0.9 subtype cantLoad NA 1 sudoku success YES 2.6 sudokuAlt success YES 0.1-4

SUE success NO 1 summarytools failure NA 0.2

Sunder success YES 0.0.4

SunterSampling success YES 1.0.1 supclust cantLoad NA 1.0-7 superbiclust success MAYBE 1.1 superdiag noExamples NA 1.1

SuperLearner success NO 2.0-15 superMDS success YES 1.0.2 superpc success MAYBE 1.09

SuppDists success NO 1.1-9.1 support.BWS success YES 0.1-2 support.CEs failure NA 0.3-2 surface cantLoad NA 0.4-1

Surrogate cantLoad NA 0.1-4 suRtex noData NA 0.9 surv2sampleComp cantLoad NA 1.0-4 survAccuracyMeasures success YES 1.2 survAUC success YES 1.0-5 survC1 success YES 1.0-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 301

Matches Open- Package Package Name TERR Result Source R? Version surveillance cantLoad NA 1.8-3 survexp.fr failure NA 1 survey timedOut NA 3.30-3 surveydata timedOut NA 0.1-14

Survgini success YES 1 survIDINRI success YES 1.1-1 survival success NO 2.37-7 survivalMPL success YES 0.1.1 survivalROC success YES 1.0.3 survMisc cantLoad NA 0.4.4 survPresmooth noExamples NA 1.1-8 survrec success YES 1.2-2

SurvRegCensCov success YES 1.3 survsim success MAYBE 1.1.2 survSNP failure NA 0.23.2 svapls cantLoad NA 1.4 svcm success YES 0.1.2 svd cantLoad NA 1.1 svDialogs success YES 0.9-57 svDialogstcltk noData NA 0.9-4 svdvisual success YES 1.1 svGUI success YES 0.9-55 svgViewR success NO 1.0.0 svHttp noData NA 0.9-55 svIDE timedOut NA 0.9-52

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 302

Matches Open- Package Package Name TERR Result Source R? Version svKomodo noExamples NA 0.9-62 svMisc timedOut NA 0.9-70

SVMMaj timedOut NA 0.2-2 svmpath success YES 0.953 svSocket success NO 0.9-57 svSweave noData NA 0.9-8 svTools failure NA 0.9-4 svUnit success NO 0.7-12 svWidgets noExamples NA 0.9-44

SvyNom failure NA 1 svyPVpack failure NA 0.1-1 swamp failure NA 1.2.3

SWATmodel success YES 0.5.9

SweaveListingUtils failure NA 0.6.2 sweidnumbr failure NA 0.2 swfscMisc failure NA 1.0.3 swirl cantLoad NA 2.2.21

SwissAir failure NA 1.1.4 switchnpreg failure NA 0.8-0 sybil failure NA 1.2.6 sybilccFBA success YES 1.0.0 sybilcycleFreeFlux failure NA 1.0.1 sybilDynFBA success YES 0.0.2 sybilEFBA noExamples NA 1.0.1 sybilSBML failure NA 2.0.8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 303

Matches Open- Package Package Name TERR Result Source R? Version

symbolicDA cantLoad NA 0.4-1

symbols failure NA 1.1

symmoments cantLoad NA 1.2

synbreed cantLoad NA 0.10-5

synbreedData noExamples NA 1.4

synchrony success NO 0.2.3

SynchWave failure NA 1.1.1

SYNCSA cantLoad NA 1.3.2

SynergizeR noExamples NA 0.2

SyNet failure NA 2

synlik failure NA 0.1.1

Synth success NO 1.1-5

synthpop cantLoad NA 1.0-0

sysfonts cantLoad NA NA

systemfit failure NA 1.1-14

T / Package Compatibility Details CRAN packages with names beginning with T tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

tab success NO 2.1.3

Table1Heatmap failure NA 1.1

table1xls cantLoad NA 0.3.1

TableMonster success YES 1.1

tableone failure NA 0.6.3

tableplot failure NA 0.3-5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 304

Matches Open- Package Package Name TERR Result Source R? Version tables cantLoad NA 0.7.79

TableToLongForm success NO 1.3.1 tabplot cantLoad NA 1.1 tabplotd3 noData NA 0.3.3 tabuSearch success YES 1.1 tagcloud fatalError NA 0.5

TAM cantLoad NA 1.3

TANOVA noExamples NA 1.0.0

TaoTeProgramming success YES 1

TapeR success NO 0.3.2 taRifx failure NA 1.0.6 taRifx.geo cantLoad NA 1.0.6 tau timedOut NA 0.0-18

TauP.R failure NA 1.1 tawny failure NA 2.1.2 tawny.types success YES 1.1.3 taxize cantLoad NA 0.5.2

Taxonstand success YES 1.7 tbart failure NA 0.9.1 tbdiag success YES 0.1

TBEST success NO 5

TcGSA cantLoad NA 0.9.8 tcltk2 cantLoad NA 1.2-11 tclust success NO 1.2-3 tcR cantLoad NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 305

Matches Open- Package Package Name TERR Result Source R? Version

TDA timedOut NA 1.3

TDboost success YES 1

TDD success YES 0.4 tdm cantLoad NA 3.0.3

TDMR failure NA 1.2 tdthap noExamples NA 1.1-7

TeachingDemos failure NA 2.9

TeachingSampling failure NA 3.2.1

TeachNet success YES 0.7

TED cantLoad NA 1.1.1

TEEReg success NO 1 teigen failure NA 2.0.7 tempdisagg failure NA 0.24.0 tensor success YES 1.5 tensorA failure NA 0.36

TEQR success YES 5.0-0

TERAplusB success NO 1 tergm cantLoad NA 3.2.4 termstrc cantLoad NA 1.3.7 ternvis failure NA 1.1

TESS failure NA 1.2.1 tester success NO 0.1.7 testit failure NA 0.4

TestScorer noExamples NA 1.6

TestSurvRec success NO 1.2.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 306

Matches Open- Package Package Name TERR Result Source R? Version testthat timedOut NA 0.9.1 testthatsomemore success MAYBE 0.1 texmex success NO 2.1

TExPosition success NO 2.6.10 texreg failure NA 1.34 textcat timedOut NA 1.0-2 textir failure NA 2.0-2 textometry success YES 0.1.4

TFDEA failure NA 0.9.5 tfer success YES 1.1

TFMPvalue success MAYBE 0.0.5 tfplot failure NA 2014.2-2 tframe success NO 2012.8-1 tframePlus timedOut NA 2013.9-1

TFX success YES 0.1.0 tgp cantLoad NA 2.4-11 tgram success YES 0.2-2

TH.data failure NA 1.0-6 thermocouple success YES 1.0.0 thgenetics success YES 0.3-4

Thinknum cantLoad NA 1.3.0

ThreeArmedTrials failure NA 0.1-0 threeboost success NO 1.1

ThreeWay success NO 1.1.2 threg failure NA 1.0.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 307

Matches Open- Package Package Name TERR Result Source R? Version

ThresholdROC failure NA 1 tibbrConnector noExamples NA 1.5.0-71 tictoc cantLoad NA 1

TiddlyWikiR success MAYBE 1.0.1

Tides success NO 1 tidyr timedOut NA 0.2.0 tiff failure NA 0.1-5 tiger failure NA 0.2.3.1 tigerstats failure NA 0.2 tightClust success NO 1 tikzDevice cantLoad NA 0.8.1 tileHMM failure NA 1.0-6

TilePlot success YES 1.3.1 timeDate failure NA 3011.99 timeit noExamples NA 0.2.1 timeline failure NA 0.9

TimeMachine failure NA 1.2 timeordered timedOut NA 0.9.7

TimeProjection failure NA 0.2.0 timereg cantLoad NA 1.8.6 timeROC failure NA 0.2 timesboot failure NA 1 timeSeries failure NA 3011.98 timeseriesdb success YES 0.1 timetools failure NA 1.6.5

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 308

Matches Open- Package Package Name TERR Result Source R? Version

TimeWarp timedOut NA 1.0-7 timma success YES 1.2.0

TIMP failure NA 1.12.1 timsac success NO 1.3.3

Tinflex success MAYBE 1

TInPosition success NO 0.13.6 tipom success YES 1.0.2-1 tis failure NA 1.27 titan failure NA 1.0-16 tkrgl success YES 0.7 tkrplot cantLoad NA NA tlemix success YES 0.1.3 tlm timedOut NA 0.1.3 tlmec noExamples NA 0.0-2 tlnise success YES 2 tm failure NA 0.6 tm.plugin.alceste timedOut NA 1.1 tm.plugin.dc failure NA 0.2-7 tm.plugin.europresse failure NA 1.1 tm.plugin.factiva failure NA 1.5 tm.plugin.lexisnexis failure NA 1.1 tm.plugin.mail failure NA 0.1 tm.plugin.webmining cantLoad NA 1.2.2 tmap timedOut NA 0.6 tmle failure NA 1.2.0-4

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 309

Matches Open- Package Package Name TERR Result Source R? Version tmle.npvi failure NA 0.8.1 tmvtnorm cantLoad NA NA tnet timedOut NA 3.0.11 toaster failure NA 0.2.5 tolerance cantLoad NA 1.0.0 topicmodels failure NA 0.2-1

TopKLists cantLoad NA 1.0.3 topmodel success MAYBE 0.7.2-2 topologyGSA timedOut NA 1.4.4 topsis success YES 1 tosls success YES 1 tourr success NO 0.5.3 tourrGui noExamples NA 0.4 toxtestD failure NA 2 tpe noData NA 1.0.1

TPmsm failure NA 1.2.0 tpr cantLoad NA 0.3-1

TR8 cantLoad NA 0.9.11 track timedOut NA 1.0-15 trackObjs timedOut NA 1.0-18

TrackReconstruction cantLoad NA 1.1 tractor.base success NO 2.5.0 traitr failure NA 0.14 traj failure NA 1.2 trajectories cantLoad NA 0.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 310

Matches Open- Package Package Name TERR Result Source R? Version

TraMineR failure NA 1.8-9

TraMineRextras failure NA 0.2.3

TRAMPR failure NA 1.0-7 translateR success YES 1 transport success YES 0.6-3 trapezoid failure NA 2.0-0

TRD success YES 1

TreatmentSelection cantLoad NA 1.1.2 treatSens failure NA 1 tree failure NA 1.0-35 treebase cantLoad NA 0.0-7.1 treeclim noData NA 1.0.7 treecm success YES 1.2.1 treemap cantLoad NA 2.2

TreePar cantLoad NA 3.3

TreeSim cantLoad NA 2.1

TreeSimGM cantLoad NA 1.2 treethresh cantLoad NA 0.1-8

TrialSize failure NA 1.3 triangle success YES 0.8 trifield success NO 1.1

TriMatch failure NA 0.9.1 trimcluster success NO 0.1-2 trimTrees success YES 1.2 trioGxE failure NA 0.1-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 311

Matches Open- Package Package Name TERR Result Source R? Version trip cantLoad NA 1.1-19 tripack success MAYBE 1.3-6 tripEstimation success YES 0.0-41

TripleR cantLoad NA 1.4 trotter success NO 0.6

TRSbook cantLoad NA 1.0.1 trueskill success MAYBE 0.1 truncdist failure NA 1.0-1 truncgof failure NA 0.6-0 truncnorm cantLoad NA NA truncreg success NO 0.2-1 truncSP failure NA 1.2.2 trust failure NA 0.1-6 trustOptim failure NA 0.8.4.1

TSA timedOut NA 1.01 tsbridge failure NA 1.1 tsbugs failure NA 1.2 tsc success YES 1.0-3

TSclust cantLoad NA 1.2.3

TScompare noData NA 2013.9-1

TSdata noData NA 2013.9-1

TSdbi noData NA 2013.9-1

TSdist failure NA 1.2 tsDyn cantLoad NA 0.9-41

TSEN success YES 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 312

Matches Open- Package Package Name TERR Result Source R? Version tseries cantLoad NA 0.1-13 tseriesChaos failure NA 0.1-13 tsfa failure NA 2014.2-2

TSfame failure NA 2013.8-2

TSgetSymbol failure NA 2013.9-1

TShistQuote failure NA 2013.9-1

TSHRC success YES 0.1-3 tsintermittent cantLoad NA 1.5

TSjson success YES 2014.4-1 tslars success YES 1 tsModel success YES 0.6 tsne noExamples NA 0.1-2

TSodbc failure NA 2013.9-1 tsoutliers cantLoad NA 0.4

TSP cantLoad NA 2013.9-1

Tsphere success YES 1 tspmeta cantLoad NA 1.1

TSPostgreSQL timedOut NA 2013.9-1

TSsql success NO 2014.4-1

TSSQLite failure NA 2013.9-1

TSTutorial failure NA 1.2.3

TSxls cantLoad NA 2013.8-2

TSzip cantLoad NA 2013.9-1

TTAinterfaceTrendAnalysis cantLoad NA 1.5.1 tth failure NA 4.3-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 313

Matches Open- Package Package Name TERR Result Source R? Version

TTR timedOut NA 0.22-0 ttScreening cantLoad NA 1.5 ttutils success YES 1.0-1 ttwa cantLoad NA 0.8.5.1 tufterhandout noData NA 1.2

TukeyC failure NA 1.1-5 tumblR success YES 1

TunePareto failure NA 2.4 tuneR failure NA 1.2.1 tuple success NO 0.4-02 turboEM cantLoad NA 2014.8-1 turfR success MAYBE 0.8-7 turner success YES 0.1.7

TurtleGraphics success YES 1.0-5

TUWmodel success YES 0.1-4 tvd success YES 0.1.0 tvm failure NA 0.2 twang failure NA 1.4-0 tweedie success YES 2.2.1 twiddler noExamples NA 0.5-0 twitteR success YES 1.1.7

TwoCop success YES 1 twoStageGwasPower failure NA 0.99.0 twostageTE success YES 1.2

TwoStepCLogit success YES 1.2.3

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 314

Matches Open- Package Package Name TERR Result Source R? Version

txtplot failure NA 1.0-3

U / Package Compatibility Details CRAN packages with names beginning with U tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

ucbthesis failure NA 1

ucminf cantLoad NA NA

udunits2 failure NA 0.6

ump success NO 0.5-4

unbalanced success NO 1.1

unbalhaar failure NA 2

Unicode success NO 0.1-5

uniCox success YES 1

uniftest success YES 1

uniReg success YES 1

unittest failure NA 1.1-1

unmarked cantLoad NA NA

untb failure NA 1.7-2

upclass cantLoad NA 2

uplift cantLoad NA 0.3.5

UPMASK success NO 1

urca cantLoad NA NA

urltools failure NA 0.6

USAboundaries cantLoad NA 0.1.1

UScancer success YES 0.1-2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 315

Matches Open- Package Package Name TERR Result Source R? Version

UScensus2000cdp failure NA 0.03

UScensus2000tract failure NA 0.03

UScensus2010 success YES 0.11

usdm failure NA 1.1-12

useful timedOut NA 1.1.8

userfriendlyscience cantLoad NA 0.1-2

UsingR failure NA 2.0-4

uskewFactors cantLoad NA 1

usl failure NA 1.4.1

ustyc noExamples NA 1.0.0

utility failure NA 1.3

uuid success YES 0.1-1

UWHAM success YES 1

V / Package Compatibility Details CRAN packages with names beginning with V tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

V8 cantLoad NA 0.4

vacem failure NA 0.1-1

VAR.etp failure NA 0.7

varbvs failure NA 1

varComp cantLoad NA 0.1-317

vardiag success NO 0.2-0

vardpoor cantLoad NA 0.2.4

VarEff failure NA 1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 316

Matches Open- Package Package Name TERR Result Source R? Version

VaRES failure NA 1

VariABEL cantLoad NA 0.9-2

VarianceGamma failure NA 0.3-1 vars cantLoad NA 1.5-2 varSelectIP failure NA 0.2-1 varSelRF success NO 0.7-5

VarSwapPrice success YES 1 vartors failure NA 0.2.6 vbdm success YES 0.0.4

VBLPCM cantLoad NA 2.4.3 vbsr success YES 0.0.5 vcd failure NA 1.3-2 vcdExtra failure NA 0.6-5 vcrpart cantLoad NA 0.3-1

VDA cantLoad NA 1.3 vdg cantLoad NA 1

Vdgraph success NO 2.2-2

VdgRsm success NO 1.3 vdmR failure NA 0.1.0 vec2dtransf success NO 1.1 vecsets success YES 1.1

VecStatGraphs2D success YES 1.7

VecStatGraphs3D cantLoad NA 1.6 vectoptim failure NA 0.2 vegan timedOut NA 2.2-0

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 317

Matches Open- Package Package Name TERR Result Source R? Version vegan3d cantLoad NA 0.65-0 vegclust success NO 1.6.3 vegdata cantLoad NA 0.6-7 vegetarian failure NA 1.2

VennDiagram failure NA 1.6.9 venneuler cantLoad NA 1.1-0 verification failure NA 1.41 vetools cantLoad NA 1.3-28

VGAM cantLoad NA 0.9-5

VGAMdata failure NA 0.9-5

VHDClassification cantLoad NA 0.3

VideoComparison cantLoad NA 0.11

VIF success YES 1

VIM cantLoad NA 4.1.0

VIMGUI cantLoad NA 0.9.0

VineCopula cantLoad NA 1.4 vines noData NA 1.1.0 violinmplot success NO 0.2.1 vioplot success YES 0.2 viopoints failure NA 0.2-1 virtualspecies failure NA 1 visova failure NA 1.1 visreg success NO 2.1-0 visualFields cantLoad NA 0.4 visualize success YES 4.2

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 318

Matches Open- Package Package Name TERR Result Source R? Version

vitality success YES 1.1

VizOR failure NA 0.7-9

VLF noExamples NA 1

VLMC failure NA 1.4-0

VNM success YES 2

Voss cantLoad NA 0.1-4

vowels failure NA 1.2-1

vows cantLoad NA 0.3.1

VoxR failure NA 0.5.1

VPdtw success NO 2.1-10

vrmlgen failure NA 1.4.9

vrtest failure NA 0.97

vscc cantLoad NA 0.2

VSURF success YES 0.8.2

vudc success NO 1

vwr timedOut NA 0.3.0

W / Package Compatibility Details CRAN packages with names beginning with W tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

W2CWM2C success YES 1

W3CMarkupValidator cantLoad NA 0.1-1

waffect success NO 1.2

walkscoreAPI noExamples NA 1.2

WARN failure NA 1.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 319

Matches Open- Package Package Name TERR Result Source R? Version wasim cantLoad NA 1.1.2 waterData failure NA 1.0.4 waterfall success MAYBE 0.9.9.20121030

Watersheds cantLoad NA 1

Wats failure NA 0.2-16 waveband success YES 4.6

WaveCD success YES 1 waved timedOut NA 1.1-2

WaveletComp failure NA 1 wavelets success NO 0.3-0 wavemulcor success YES 1.2 waveslim failure NA 1.7.5 wavethresh failure NA 4.6.6 wbs failure NA 1.2

WCE success YES 1

WCQ success NO 0.2

WDI success NO 2.4 weatherData success YES 0.4.1 webutils success YES 0.2 webvis failure NA 0.0.2

WeightedCluster failure NA 1.2 weightedKmeans failure NA 1.2.0

WeightedPortTest success YES 1 weightedScores cantLoad NA 0.9.1 weights cantLoad NA 0.8

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 320

Matches Open- Package Package Name TERR Result Source R? Version weirs failure NA 0.23 wesanderson success MAYBE 0.3 wfe cantLoad NA 1.3 wgaim cantLoad NA 1.4-3

WGCNA cantLoad NA 1.43 wgsea failure NA 1.8

WhatIf failure NA 1.5-6 whisker success YES 0.3-2

WhiteStripe cantLoad NA 1 widals failure NA 0.5.4 widenet failure NA 0.1-2 wikibooks success YES 0.2 wikipediatrend success YES 0.2.0

WikipediR cantLoad NA 1.1.0

WilcoxCV success YES 1.0-2 wildlifeDI cantLoad NA 0.2 windex success YES 1 witness failure NA 1.2 wle failure NA 0.9-9

WMCapacity cantLoad NA 0.9.6.6

WMDB success YES 1 wmtsa timedOut NA 2.0-0 wnominate timedOut NA 0.99 wombsoft noData NA 2 wordcloud cantLoad NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 321

Matches Open- Package Package Name TERR Result Source R? Version wordmatch noData NA 1 wordnet cantLoad NA 0.1-10

WordPools success NO 1.0-2 wpp2008 failure NA 1.0-1 wpp2010 failure NA 1.2-0 wpp2012 failure NA 2.2-1 wppExplorer cantLoad NA 1.4-0 wq cantLoad NA 0.4-1 wrassp failure NA 0.1.3

WrightMap failure NA 1.1 write.snns success YES 0.0-4.2

WriteXLS failure NA 3.5.1

WRS2 failure NA 0.3-1 wrspathrow cantLoad NA 0.1 wrspathrowData noData NA 1 wskm failure NA 1.4.19 wsrf failure NA 1.4.0 wSVM success NO 0.1-7 wtcrsk timedOut NA 1.3 wux cantLoad NA 1.2-2

WWGbook success YES 1.0.1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 322

X / Package Compatibility Details CRAN packages with names beginning with X tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

x.ent cantLoad NA 1.0.6

x12 failure NA 1.6.0

x12GUI cantLoad NA 0.13.0

XBRL success YES 0.99.14

xergm cantLoad NA 1.3

xgboost failure NA 0.3-2

xhmmScripts success YES 1.1

XiMpLe failure NA 0.03-21

xkcd cantLoad NA 0.0.4

XLConnect cantLoad NA 0.2-10

XLConnectJars noData NA 0.2-9

xlsx cantLoad NA 0.5.7

xlsxjars noData NA 0.6.1

Xmisc failure NA 0.2.1

XML timedOut NA 3.98-1.1

XML2R cantLoad NA 0.0.6

XNomial cantLoad NA 1.0.1

xoi cantLoad NA 0.61-1

xpose4 cantLoad NA 4.5.3

xtable success NO 1.7-4

xtal failure NA 1

xtermStyle failure NA 2.2-4

xts cantLoad NA NA

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 323

Y / Package Compatibility Details CRAN packages with names beginning with Y tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

yacca success NO 1.1

yaImpute failure NA 1.0-23

YaleToolkit failure NA 4.2.2

yaml cantLoad NA NA

ycinterextra cantLoad NA 0.1

yhat success NO 2.0-0

yhatr failure NA 0.13.2

YieldCurve success YES 4.1

ykmeans success YES 1

YourCast cantLoad NA 1.6.2

YplantQMC cantLoad NA 0.6-4

YPmodel failure NA 1.1

YuGene cantLoad NA 1.1.2

yuima failure NA 1.0.36

Z / Package Compatibility Details CRAN packages with names beginning with Z tested against the TIBCO Enterprise Runtime for R (TERR) engine version 3.1.

Matches Open- Package Package Name TERR Result Source R? Version

zCompositions cantLoad NA 1.0.3

ZeBook timedOut NA 0.5

Zelig failure NA 4.2-1

ZeligChoice cantLoad NA 0.8-1

ZeligGAM failure NA 0.7-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility 324

Matches Open- Package Package Name TERR Result Source R? Version

ZeligMultilevel failure NA 0.7-1 zendeskR noExamples NA 0.4 zic noData NA 0.8.1

ZIM failure NA 1.0.2 zipcode success YES 1 zipfR failure NA 0.6-6 zoeppritz success NO 1.0-4 zoib cantLoad NA 1 zoo failure NA 1.7-11 zooimage cantLoad NA 3.0-5 zoom success YES 2.0.4 zyp success YES 0.10-1

TIBCO® Enterprise Runtime for R: Open-Source R Package Compatibility