Table 7: Species Changing IUCN Red List Status (2015-2016)
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Diversification of Afrobatrachian Frogs and the Herpetofauna of the Arabian Peninsula
Diversification of Afrobatrachian Frogs and the Herpetofauna of the Arabian Peninsula By Daniel Portik A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Integrative Biology in the Graduate Division of the University of California, Berkeley Committee in charge: Dr. Jimmy A. McGuire, Chair Dr. Rauri Bowie Dr. David Blackburn Dr. Rosemary Gillespie Fall 2015 Abstract Diversification of Afrobatrachian Frogs and the Herpetofauna of the Arabian Peninsula by Daniel Portik Doctor of Philosophy in Biology University of California, Berkeley Dr. Jimmy A. McGuire, Chair The identification of biotic and abiotic factors that promote the diversification of clades across Africa and the Arabian Peninsula remains a difficult challenge. A variety of ecological and evolutionary processes can be driving such patterns, and clade-specific traits may also play a role in the evolution of these groups. Comparative evolutionary studies of particular clades, relying on a phylogenetic framework, can be used to investigate many of these topics. Beyond these mechanisms there are abiotic factors, such as geological events, that can drive vicariance and dispersal events for large sets of taxa. The investigation of historical biogeography in a comparative phylogenetic framework can be used to detect such patterns. My dissertation explores these topics using reptiles and amphibians as study systems, and I rely on the generation of molecular sequence data, phylogenetics, and the use of comparative phylogenetic methods to address a variety of questions. I provide the abstract for each chapter below. Chapter 1: The reproductive modes of anurans (frogs and toads) are the most diverse among all the terrestrial vertebrates, and a major challenge is identifying selective factors that promote the evolution or retention of reproductive modes across clades. -
Phylogeny and Evolutionary Patterns of South American Octodontoid Rodents
http://app.pan.pl/SOM/app59-Verzi_etal_SOM.pdf SUPPLEMENTARY ONLINE MATERIAL FOR Phylogeny and evolutionary patterns of South American octodontoid rodents Diego H. Verzi, A. Itatí Olivares, and Cecilia C. Morgan published in Acta Palaeontologica Polonica 2014, 59 (4): 757–769. http://dx.doi.org/10.4202/app.2012.0135 Supplementary Online Material: SOM 1 (a) Description of characters used in the phylogenetic analysis References (b) Character matrix (c) The three most parsimonious trees. (d) Strict consensus tree; numbers indicate unambiguous synapomorphies SOM 2 List of taxa and specimens examined. References SOM 3 Age estimates for the first appearance data of Octodontoidea References 1 SOM 1 (a) Description of characters used in the phylogenetic analysis. Nomenclature of craniomandibular traits follows Hill (1935), Lavocat (1971, 1976), Woods & Howland (1979), Moore (1981), Wahlert (1984), Novacek (1993), Verzi (2001), Olivares et al. (2012a). Dental nomenclature follows Marivaux et al. (2004, fig. 1) and Antoine et al. (2012, fig. S1). References of publications that include at least partial descriptions of the listed characters are indicated. Character 1. Premaxillary septum separating incisive foramina (Verzi 2001): with posterior ends of premaxillae joined medially, forming a pointed or rounded projection which may join an anterior apophysis of the maxilla (0); with posterior ends of premaxillae divergent, each one forming a small lateral apophysis (1). Character 2. Lateral walls of incisive foramina (or of the corresponding cavity in case of partially obliterated foramina) (Verzi, 2008): with concave margins (0); with protruding medial walls of premaxillae producing anteriorly convergent margins (1); margins very narrow or not developed posterior to premaxillary-maxillary suture (2). -
MADAGASCAR: the Wonders of the “8Th Continent” a Tropical Birding Custom Trip
MADAGASCAR: The Wonders of the “8th Continent” A Tropical Birding Custom Trip October 20—November 6, 2016 Guide: Ken Behrens All photos taken during this trip by Ken Behrens Annotated bird list by Jerry Connolly TOUR SUMMARY Madagascar has long been a core destination for Tropical Birding, and with the opening of a satellite office in the country several years ago, we further solidified our expertise in the “Eighth Continent.” This custom trip followed an itinerary similar to that of our main set-departure tour. Although this trip had a definite bird bias, it was really a general natural history tour. We took our time in observing and photographing whatever we could find, from lemurs to chameleons to bizarre invertebrates. Madagascar is rich in wonderful birds, and we enjoyed these to the fullest. But its mammals, reptiles, amphibians, and insects are just as wondrous and accessible, and a trip that ignored them would be sorely missing out. We also took time to enjoy the cultural riches of Madagascar, the small villages full of smiling children, the zebu carts which seem straight out of the Middle Ages, and the ingeniously engineered rice paddies. If you want to come to Madagascar and see it all… come with Tropical Birding! Madagascar is well known to pose some logistical challenges, especially in the form of the national airline Air Madagascar, but we enjoyed perfectly smooth sailing on this tour. We stayed in the most comfortable hotels available at each stop on the itinerary, including some that have just recently opened, and savored some remarkably good food, which many people rank as the best Madagascar Custom Tour October 20-November 6, 2016 they have ever had on any birding tour. -
Kenya Soe Ch4 A
PART 2 STATE OF THE ENVIRONMENT 61 CHAPTER BIODIVERSITY4 Introduction The Convention on Biological Diversity (CBD) defi nes biodiversity as Kenya’s rich biodiversity Lead Authors ‘the variability among living organisms from all sources including, can be attributed to a number Ali A. Ali and Monday S. Businge among others, terrestrial, marine and other aquatic ecosystems and of factors, including a long Contributing Authors S. M. Mutune, Jane Kibwage, Ivy Achieng, the ecological complexes of which they are part [and] includes diversity evolutionary history, variable Godfrey Mwangi, David Ongare, Fred Baraza, within species, between species and of ecosystems.’ Biodiversity climatic conditions, and diverse Teresa Muthui, Lawrence M. Ndiga, Nick Mugi therefore comprises genetic and species diversity of animals and plants habitat types and ecosystems. Reviewer as well as ecosystem diversity. Kenya is endowed with an enormous The major biodiversity Nathan Gichuki diversity of ecosystems and wildlife species which live in the terrestrial, concentration sites fall within aquatic and aerial environment. These biological resources are the existing protected areas fundamental to national prosperity as a source of food, medicines, network (national parks, reserves and sanctuaries) which are mostly energy, shelter, employment and foreign exchange. For instance, managed by the Kenya Wildlife Service (KWS). However, over 70 percent agricultural productivity and development are dependent on the of the national biodiversity occurs outside the protected areas. availability of a wide variety of plant and animal genetic resources and In spite of its immense biotic capital, Kenya experiences severe on the existence of functional ecological systems, especially those that ecological and socio-economic problems. -
Galidictis Grandidieri, Grandidier's Vontsira
The IUCN Red List of Threatened Species™ ISSN 2307-8235 (online) IUCN 2008: T8834A45198057 Galidictis grandidieri, Grandidier’s Vontsira Assessment by: Hawkins, F. View on www.iucnredlist.org Citation: Hawkins, F. 2015. Galidictis grandidieri. The IUCN Red List of Threatened Species 2015: e.T8834A45198057. http://dx.doi.org/10.2305/IUCN.UK.2015-4.RLTS.T8834A45198057.en Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale, reposting or other commercial purposes is prohibited without prior written permission from the copyright holder. For further details see Terms of Use. The IUCN Red List of Threatened Species™ is produced and managed by the IUCN Global Species Programme, the IUCN Species Survival Commission (SSC) and The IUCN Red List Partnership. The IUCN Red List Partners are: BirdLife International; Botanic Gardens Conservation International; Conservation International; Microsoft; NatureServe; Royal Botanic Gardens, Kew; Sapienza University of Rome; Texas A&M University; Wildscreen; and Zoological Society of London. If you see any errors or have any questions or suggestions on what is shown in this document, please provide us with feedback so that we can correct or extend the information provided. THE IUCN RED LIST OF THREATENED SPECIES™ Taxonomy Kingdom Phylum Class Order Family Animalia Chordata Mammalia Carnivora Eupleridae Taxon Name: Galidictis grandidieri Wozencraft, 1986 Common Name(s): • English: Grandidier’s Vontsira, Giant-striped Mongoose, Grandidier's Mongoose Assessment Information Red List Category & Criteria: Endangered B1ab(i,ii,iii,v) ver 3.1 Year Published: 2015 Date Assessed: March 2, 2015 Justification: This species is listed as Endangered under B1ab(i,ii,iii,v). -
Platypus Collins, L.R
AUSTRALIAN MAMMALS BIOLOGY AND CAPTIVE MANAGEMENT Stephen Jackson © CSIRO 2003 All rights reserved. Except under the conditions described in the Australian Copyright Act 1968 and subsequent amendments, no part of this publication may be reproduced, stored in a retrieval system or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, duplicating or otherwise, without the prior permission of the copyright owner. Contact CSIRO PUBLISHING for all permission requests. National Library of Australia Cataloguing-in-Publication entry Jackson, Stephen M. Australian mammals: Biology and captive management Bibliography. ISBN 0 643 06635 7. 1. Mammals – Australia. 2. Captive mammals. I. Title. 599.0994 Available from CSIRO PUBLISHING 150 Oxford Street (PO Box 1139) Collingwood VIC 3066 Australia Telephone: +61 3 9662 7666 Local call: 1300 788 000 (Australia only) Fax: +61 3 9662 7555 Email: [email protected] Web site: www.publish.csiro.au Cover photos courtesy Stephen Jackson, Esther Beaton and Nick Alexander Set in Minion and Optima Cover and text design by James Kelly Typeset by Desktop Concepts Pty Ltd Printed in Australia by Ligare REFERENCES reserved. Chapter 1 – Platypus Collins, L.R. (1973) Monotremes and Marsupials: A Reference for Zoological Institutions. Smithsonian Institution Press, rights Austin, M.A. (1997) A Practical Guide to the Successful Washington. All Handrearing of Tasmanian Marsupials. Regal Publications, Collins, G.H., Whittington, R.J. & Canfield, P.J. (1986) Melbourne. Theileria ornithorhynchi Mackerras, 1959 in the platypus, 2003. Beaven, M. (1997) Hand rearing of a juvenile platypus. Ornithorhynchus anatinus (Shaw). Journal of Wildlife Proceedings of the ASZK/ARAZPA Conference. 16–20 March. -
Amphibian Diversity in Shimba Hills National Reserve, Kenya: a Comprehensive List of Specimens and Species
Journal of East African Natural History 106(1): 19–46 (2017) AMPHIBIAN DIVERSITY IN SHIMBA HILLS NATIONAL RESERVE, KENYA: A COMPREHENSIVE LIST OF SPECIMENS AND SPECIES Beryl A. Bwong Biogeography Research Group, Department of Environmental Sciences University of Basel, 4056 Basel , Switzerland & Herpetology Section, Zoology Department, National Museums of Kenya P.O Box 40658, 00100 Nairobi, Kenya [email protected] Joash O. Nyamache, Patrick K. Malonza, Domnick V. Wasonga, Jacob M. Ngwava Herpetology Section, Zoology Department, National Museums of Kenya P.O Box 40658, 00100 Nairobi, Kenya [email protected]; [email protected]; [email protected], [email protected] Christopher D. Barratt, Peter Nagel Biogeography Research Group, Department of Environmental Sciences University of Basel, 4056 Basel , Switzerland [email protected]; [email protected] Simon P. Loader Biogeography Research Group, Department of Environmental Sciences University of Basel, 4056 Basel , Switzerland & Life Sciences, The Natural History Museum, London SW7 5BD, UK [email protected] ABSTRACT We present the first annotated amphibian checklist of Shimba Hills National Reserve (SHNR). The list comprises of 30 currently known amphibians (28 anurans and two caecilians), which includes 11 families and 15 genera. In addition, individual records per species, distribution in the reserve and brief remarks about the species are presented. The checklist is based on information from museum collections, field guides, unpublished reports and newly collected field data. We are able to confirm the presence of two Eastern Afromontane species in the SHNR: Scolecomorphus cf. vittatus and Callulina cf. kreffti. The latter has not been recorded since the original collection of a single specimen over 50 years ago. -
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN or other participating organizations. Published by: IUCN, Gland, Switzerland Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. Citation: Lamoreux, J. F., McKnight, M. W., and R. Cabrera Hernandez (2015). Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca. Gland, Switzerland: IUCN. xxiv + 320pp. ISBN: 978-2-8317-1717-3 DOI: 10.2305/IUCN.CH.2015.SSC-OP.53.en Cover photographs: Totontepec landscape; new Plectrohyla species, Ixalotriton niger, Concepción Pápalo, Thorius minutissimus, Craugastor pozo (panels, left to right) Back cover photograph: Collecting in Chamula, Chiapas Photo credits: The cover photographs were taken by the authors under grant agreements with the two main project funders: NGS and CEPF. -
The Impact of Forest Logging and Fragmentation on Carnivore Species Composition, Density and Occupancy in Madagascar’S Rainforests
The impact of forest logging and fragmentation on carnivore species composition, density and occupancy in Madagascar’s rainforests B RIAN D. GERBER,SARAH M. KARPANTY and J OHNY R ANDRIANANTENAINA Abstract Forest carnivores are threatened globally by Introduction logging and forest fragmentation yet we know relatively little about how such change affects predator populations. arnivores are one of the most threatened groups of 2009 This is especially true in Madagascar, where carnivores Cterrestrial mammals (Karanth & Chellam, ). have not been extensively studied. To understand better the Declines of predators are often attributed to habitat loss effects of logging and fragmentation on Malagasy carnivores and fragmentation but few quantitative studies have we evaluated species composition, density of fossa examined how carnivore populations and communities 2002 Cryptoprocta ferox and Malagasy civet Fossa fossana, and change with habitat loss or fragmentation (Crooks, ; 2005 carnivore occupancy in central-eastern Madagascar. We Michalski & Peres, ). This is particularly true for ’ photographically-sampled carnivores in two contiguous Madagascar s carnivores, with knowledge lacking about ff (primary and selectively-logged) and two fragmented rain- their ecology and the e ects of anthropogenic disturbances 2010 forests (fragments , 2.5 and . 15 km from intact forest). (Irwin et al., ), especially in the eastern rainforest where Species composition varied, with more native carnivores in only short-term studies have been conducted (Gerber et al., 2010 16 the contiguous than fragmented rainforests. F. fossana was ). With only % of the original primary forests extant absent from fragmented rainforests and at a lower density in Madagascar and those remaining becoming smaller and 2007 in selectively-logged than in primary rainforest (mean more isolated over time (Harper et al., ), habitat loss −2 1.38 ± SE 0.22 and 3.19 ± SE 0.55 individuals km , respect- and fragmentation are serious threats to many endemic 2010 ively). -
The Status and Distribution of Mediterranean Mammals
THE STATUS AND DISTRIBUTION OF MEDITERRANEAN MAMMALS Compiled by Helen J. Temple and Annabelle Cuttelod AN E AN R R E IT MED The IUCN Red List of Threatened Species™ – Regional Assessment THE STATUS AND DISTRIBUTION OF MEDITERRANEAN MAMMALS Compiled by Helen J. Temple and Annabelle Cuttelod The IUCN Red List of Threatened Species™ – Regional Assessment The designation of geographical entities in this book, and the presentation of material, do not imply the expression of any opinion whatsoever on the part of IUCN or other participating organizations, concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN or other participating organizations. Published by: IUCN, Gland, Switzerland and Cambridge, UK Copyright: © 2009 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. Red List logo: © 2008 Citation: Temple, H.J. and Cuttelod, A. (Compilers). 2009. The Status and Distribution of Mediterranean Mammals. Gland, Switzerland and Cambridge, UK : IUCN. vii+32pp. ISBN: 978-2-8317-1163-8 Cover design: Cambridge Publishers Cover photo: Iberian lynx Lynx pardinus © Antonio Rivas/P. Ex-situ Lince Ibérico All photographs used in this publication remain the property of the original copyright holder (see individual captions for details). -
Look What the Cat Dragged In: Felis Silvestris Catus As Predators of Insular Bats and Instance of Predation on the Endangered Pipistrellus Maderensis
Ricardo Rocha Barbastella 8 (1) Open Access ISSN: 1576-9720 SECEMU www.secemu.org Look what the cat dragged in: Felis silvestris catus as predators of insular bats and instance of predation on the endangered Pipistrellus maderensis Ricardo Rocha1,2 ¹ Centre for Ecology, Evolution and Environmental Changes Faculty of Sciences, University of Lisbon, 1749-016 Lisbon (Portugal). 2 Metapopulation Research Centre University of Helsinki, PO Box 65 (Viikinkaari 1), FI-00014 Helsinki (Finland). *Corresponding author e-mail: [email protected] DOI: http://dx.doi.org/10.14709/BarbJ.8.1.2015.04 © 2015 Published by SECEMU. Spanish title: Felis silvestris catus como predador de murciélagos insulares y cita de depredación sobre el amenazado Pipistrellus madei- rensis. Abstract: This note reports the predation of a threatened Madeira pipistrelle bat by a domestic house cat. This represents the first confirmed record of cat predation upon a Macaronesian bat and adds to an increasing body of evidence suggesting that free-ranging cats pose a strong negative impact to native insular vertebrate populations. Keywords: bats, domestic cats, non-native species, Madeira pipistrelle, Macaronesia. received: January 2nd. 2015 accepted: February 7th 2015 The impact of non-native species is one of the most influential forces underpinning the global biodiversity crisis (Nogales et al. 2013, Dirzo et al. 2014). Since the domestication of the African wildcat Felis silvestris lybica some 9500 years ago, the domestic counterpart F. s. catus (Fig. 1) has become one of the world’s most abundant and widespread pets and has established feral populations in both continental and island ecosystems (Driscoll et al. -
Correlates of Eye Colour and Pattern in Mantellid Frogs
SALAMANDRA 49(1) 7–17 30Correlates April 2013 of eyeISSN colour 0036–3375 and pattern in mantellid frogs Correlates of eye colour and pattern in mantellid frogs Felix Amat 1, Katharina C. Wollenberg 2,3 & Miguel Vences 4 1) Àrea d‘Herpetologia, Museu de Granollers-Ciències Naturals, Francesc Macià 51, 08400 Granollers, Catalonia, Spain 2) Department of Biology, School of Science, Engineering and Mathematics, Bethune-Cookman University, 640 Dr. Mary McLeod Bethune Blvd., Daytona Beach, FL 32114, USA 3) Department of Biogeography, Trier University, Universitätsring 15, 54286 Trier, Germany 4) Zoological Institute, Division of Evolutionary Biology, Technical University of Braunschweig, Spielmannstr. 8, 38106 Braunschweig, Germany Corresponding author: Miguel Vences, e-mail: [email protected] Manuscript received: 18 March 2013 Abstract. With more than 250 species, the Mantellidae is the most species-rich family of frogs in Madagascar. These frogs are highly diversified in morphology, ecology and natural history. Based on a molecular phylogeny of 248 mantellids, we here examine the distribution of three characters reflecting the diversity of eye colouration and two characters of head colouration along the mantellid tree, and their correlation with the general ecology and habitat use of these frogs. We use Bayesian stochastic character mapping, character association tests and concentrated changes tests of correlated evolu- tion of these variables. We confirm previously formulated hypotheses of eye colour pattern being significantly correlated with ecology and habits, with three main character associations: many tree frogs of the genus Boophis have a bright col- oured iris, often with annular elements and a blue-coloured iris periphery (sclera); terrestrial leaf-litter dwellers have an iris horizontally divided into an upper light and lower dark part; and diurnal, terrestrial and aposematic Mantella frogs have a uniformly black iris.