Cyclopeptide Toxins of Lethal Amanitas: Compositions, Distribution and Phylogenetic Implication
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Molecular Phylogenetic Studies in the Genus Amanita
1170 Molecular phylogenetic studies in the genus Amanita I5ichael Weiß, Zhu-Liang Yang, and Franz Oberwinkler Abstracl A group of 49 Amanita species that had been thoroughly examined morphologically and amtomically was analyzed by DNA sequence compadson to estimate natural groups and phylogenetic rclationships within the genus. Nuclear DNA sequences coding for a part of the ribosomal large subunit were determined and evaluated using neighbor-joining with bootstrap analysis, parsimony analysis, conditional clustering, and maximum likelihood methods, Sections Amanita, Caesarea, Vaginatae, Validae, Phalloideae, and Amidella were substantially confirmed as monophyletic groups, while the monophyly of section Lepidell.t remained unclear. Branching topologies between and within sections could also pafiially be derived. Stbgenera Amanita an'd Lepidella were not supported. The Mappae group was included in section Validae. Grouping hypotheses obtained by DNA analyses are discussed in relation to the distribution of morphological and anatomical chamcters in the studied species. Key words: fungi, basidiomycetes phylogeny, Agarrcales, Amanita systematics, large subunit rDNA, 28S. R6sum6 : A partir d'un groupe de 49 esp,ces d'Amanita prdalablement examinees morphologiquement et anatomiquement, les auteurs ont utilisd la comparaison des s€quences d'ADN pour ddfinir les groupes naturels et les relations phylog6ndtiques de ce genre. Les sdquences de I'ADN nucl6aire codant pour une partie de la grande sous-unit6 ribosomale ont 6t6 ddterminEes et €valu6es en utilisant l'analyse par liaison en lacet avec le voisin (neighbor-joining with bootstrap), l'analyse en parcimonie, le rcgroupement conditionnel et les m€thodes de ressemblance maximale. Les rdsultats confirment substantiellement les sections Afiarira, Caesarea, Uaqinatae, Ualidae, Phalloideae et Amidella, comme groupes monophyldtiques, alors que la monophylie de la section Lepidella demerxe obscure. -
Mushrooms Russia and History
MUSHROOMS RUSSIA AND HISTORY BY VALENTINA PAVLOVNA WASSON AND R.GORDON WASSON VOLUME I PANTHEON BOOKS • NEW YORK COPYRIGHT © 1957 BY R. GORDON WASSON MANUFACTURED IN ITALY FOR THE AUTHORS AND PANTHEON BOOKS INC. 333, SIXTH AVENUE, NEW YORK 14, N. Y. www.NewAlexandria.org/ archive CONTENTS LIST OF PLATES VII LIST OF ILLUSTRATIONS IN THE TEXT XIII PREFACE XVII VOLUME I I. MUSHROOMS AND THE RUSSIANS 3 II. MUSHROOMS AND THE ENGLISH 19 III. MUSHROOMS AND HISTORY 37 IV. MUSHROOMS FOR MURDERERS 47 V. THE RIDDLE OF THE TOAD AND OTHER SECRETS MUSHROOMIC 65 1. The Venomous Toad 66 2. Basques and Slovaks 77 3. The Cripple, the Toad, and the Devil's Bread 80 4. The 'Pogge Cluster 92 5. Puff balls, Filth, and Vermin 97 6. The Sponge Cluster 105 7. Punk, Fire, and Love 112 8. The Gourd Cluster 127 9. From 'Panggo' to 'Pupik' 138 10. Mucus, Mushrooms, and Love 145 11. The Secrets of the Truffle 166 12. 'Gripau' and 'Crib' 185 13. The Flies in the Amanita 190 v CONTENTS VOLUME II V. THE RIDDLE OF THE TOAD AND OTHER SECRETS MUSHROOMIC (CONTINUED) 14. Teo-Nandcatl: the Sacred Mushrooms of the Nahua 215 15. Teo-Nandcatl: the Mushroom Agape 287 16. The Divine Mushroom: Archeological Clues in the Valley of Mexico 322 17. 'Gama no Koshikake and 'Hegba Mboddo' 330 18. The Anatomy of Mycophobia 335 19. Mushrooms in Art 351 20. Unscientific Nomenclature 364 Vale 374 BIBLIOGRAPHICAL NOTES AND ACKNOWLEDGEMENTS 381 APPENDIX I: Mushrooms in Tolstoy's 'Anna Karenina 391 APPENDIX II: Aksakov's 'Remarks and Observations of a Mushroom Hunter' 394 APPENDIX III: Leuba's 'Hymn to the Morel' 400 APPENDIX IV: Hallucinogenic Mushrooms: Early Mexican Sources 404 INDEX OF FUNGAL METAPHORS AND SEMANTIC ASSOCIATIONS 411 INDEX OF MUSHROOM NAMES 414 INDEX OF PERSONS AND PLACES 421 VI LIST OF PLATES VOLUME I JEAN-HENRI FABRE. -
Thesis Is Presented for the Degree of Doctor of Philosophy of Curtin University of Technology
School of Biomedical Sciences Analysis of Candidate Genes within the 3p14-p22 Region of the Human Genome for Association with Bone Mineral Density Phenotypes Benjamin H Mullin This thesis is presented for the Degree of Doctor of Philosophy of Curtin University of Technology February 2011 To the best of my knowledge and belief this thesis contains no material previously published by any other person except where due acknowledgment has been made. This thesis contains no material which has been accepted for the award of any other degree or diploma in any university. Preface The experimental work contained within this thesis was performed in the Department of Endocrinology & Diabetes at Sir Charles Gairdner Hospital under the supervision of Doctor Cyril Mamotte, Associate Professor Scott Wilson, and Professor Richard Prince. All experimental work in this thesis was performed by myself unless otherwise stated. Benjamin H. Mullin, B.Sc. Publications arising from this thesis Mullin, B. H., Prince, R. L., Dick, I. M., Hart, D. J., Spector, T. D., Dudbridge, F. & Wilson, S. G. 2008. Identification of a role for the ARHGEF3 gene in postmenopausal osteoporosis. American Journal of Human Genetics , 82 , 1262-9. Mullin, B. H., Prince, R. L., Mamotte, C., Spector, T. D., Hart, D. J., Dudbridge, F. & Wilson, S. G. 2009. Further genetic evidence suggesting a role for the RhoGTPase-RhoGEF pathway in osteoporosis. Bone , 45 , 387-91. Research grants received during completion of this thesis Wilson, S. G., Prince, R. L., Mamotte C., Mullin B. H. 2008. Influence of the ARHGEF3 gene on bone phenotypes. Arthritis Australia Project Grant ($14,500). -
Field Guide to Common Macrofungi in Eastern Forests and Their Ecosystem Functions
United States Department of Field Guide to Agriculture Common Macrofungi Forest Service in Eastern Forests Northern Research Station and Their Ecosystem General Technical Report NRS-79 Functions Michael E. Ostry Neil A. Anderson Joseph G. O’Brien Cover Photos Front: Morel, Morchella esculenta. Photo by Neil A. Anderson, University of Minnesota. Back: Bear’s Head Tooth, Hericium coralloides. Photo by Michael E. Ostry, U.S. Forest Service. The Authors MICHAEL E. OSTRY, research plant pathologist, U.S. Forest Service, Northern Research Station, St. Paul, MN NEIL A. ANDERSON, professor emeritus, University of Minnesota, Department of Plant Pathology, St. Paul, MN JOSEPH G. O’BRIEN, plant pathologist, U.S. Forest Service, Forest Health Protection, St. Paul, MN Manuscript received for publication 23 April 2010 Published by: For additional copies: U.S. FOREST SERVICE U.S. Forest Service 11 CAMPUS BLVD SUITE 200 Publications Distribution NEWTOWN SQUARE PA 19073 359 Main Road Delaware, OH 43015-8640 April 2011 Fax: (740)368-0152 Visit our homepage at: http://www.nrs.fs.fed.us/ CONTENTS Introduction: About this Guide 1 Mushroom Basics 2 Aspen-Birch Ecosystem Mycorrhizal On the ground associated with tree roots Fly Agaric Amanita muscaria 8 Destroying Angel Amanita virosa, A. verna, A. bisporigera 9 The Omnipresent Laccaria Laccaria bicolor 10 Aspen Bolete Leccinum aurantiacum, L. insigne 11 Birch Bolete Leccinum scabrum 12 Saprophytic Litter and Wood Decay On wood Oyster Mushroom Pleurotus populinus (P. ostreatus) 13 Artist’s Conk Ganoderma applanatum -
AMATOXIN MUSHROOM POISONING in NORTH AMERICA 2015-2016 by Michael W
VOLUME 57: 4 JULY-AUGUST 2017 www.namyco.org AMATOXIN MUSHROOM POISONING IN NORTH AMERICA 2015-2016 By Michael W. Beug: Chair, NAMA Toxicology Committee Assessing the degree of amatoxin mushroom poisoning in North America is very challenging. Understanding the potential for various treatment practices is even more daunting. Although I have been studying mushroom poisoning for 45 years now, my own views on potential best treatment practices are still evolving. While my training in enzyme kinetics helps me understand the literature about amatoxin poisoning treatments, my lack of medical training limits me. Fortunately, critical comments from six different medical doctors have been incorporated in this article. All six, each concerned about different aspects in early drafts, returned me to the peer reviewed scientific literature for additional reading. There remains no known specific antidote for amatoxin poisoning. There have not been any gold standard double-blind placebo controlled studies. There never can be. When dealing with a potentially deadly poisoning (where in many non-western countries the amatoxin fatality rate exceeds 50%) treating of half of all poisoning patients with a placebo would be unethical. Using amatoxins on large animals to test new treatments (theoretically a great alternative) has ethical constraints on the experimental design that would most likely obscure the answers researchers sought. We must thus make our best judgement based on analysis of past cases. Although that number is now large enough that we can make some good assumptions, differences of interpretation will continue. Nonetheless, we may be on the cusp of reaching some agreement. Towards that end, I have contacted several Poison Centers and NAMA will be working with the Centers for Disease Control (CDC). -
Peptide Chemistry up to Its Present State
Appendix In this Appendix biographical sketches are compiled of many scientists who have made notable contributions to the development of peptide chemistry up to its present state. We have tried to consider names mainly connected with important events during the earlier periods of peptide history, but could not include all authors mentioned in the text of this book. This is particularly true for the more recent decades when the number of peptide chemists and biologists increased to such an extent that their enumeration would have gone beyond the scope of this Appendix. 250 Appendix Plate 8. Emil Abderhalden (1877-1950), Photo Plate 9. S. Akabori Leopoldina, Halle J Plate 10. Ernst Bayer Plate 11. Karel Blaha (1926-1988) Appendix 251 Plate 12. Max Brenner Plate 13. Hans Brockmann (1903-1988) Plate 14. Victor Bruckner (1900- 1980) Plate 15. Pehr V. Edman (1916- 1977) 252 Appendix Plate 16. Lyman C. Craig (1906-1974) Plate 17. Vittorio Erspamer Plate 18. Joseph S. Fruton, Biochemist and Historian Appendix 253 Plate 19. Rolf Geiger (1923-1988) Plate 20. Wolfgang Konig Plate 21. Dorothy Hodgkins Plate. 22. Franz Hofmeister (1850-1922), (Fischer, biograph. Lexikon) 254 Appendix Plate 23. The picture shows the late Professor 1.E. Jorpes (r.j and Professor V. Mutt during their favorite pastime in the archipelago on the Baltic near Stockholm Plate 24. Ephraim Katchalski (Katzir) Plate 25. Abraham Patchornik Appendix 255 Plate 26. P.G. Katsoyannis Plate 27. George W. Kenner (1922-1978) Plate 28. Edger Lederer (1908- 1988) Plate 29. Hennann Leuchs (1879-1945) 256 Appendix Plate 30. Choh Hao Li (1913-1987) Plate 31. -
Forest Fungi in Ireland
FOREST FUNGI IN IRELAND PAUL DOWDING and LOUIS SMITH COFORD, National Council for Forest Research and Development Arena House Arena Road Sandyford Dublin 18 Ireland Tel: + 353 1 2130725 Fax: + 353 1 2130611 © COFORD 2008 First published in 2008 by COFORD, National Council for Forest Research and Development, Dublin, Ireland. All rights reserved. No part of this publication may be reproduced, or stored in a retrieval system or transmitted in any form or by any means, electronic, electrostatic, magnetic tape, mechanical, photocopying recording or otherwise, without prior permission in writing from COFORD. All photographs and illustrations are the copyright of the authors unless otherwise indicated. ISBN 1 902696 62 X Title: Forest fungi in Ireland. Authors: Paul Dowding and Louis Smith Citation: Dowding, P. and Smith, L. 2008. Forest fungi in Ireland. COFORD, Dublin. The views and opinions expressed in this publication belong to the authors alone and do not necessarily reflect those of COFORD. i CONTENTS Foreword..................................................................................................................v Réamhfhocal...........................................................................................................vi Preface ....................................................................................................................vii Réamhrá................................................................................................................viii Acknowledgements...............................................................................................ix -
The Ectomycorrhizal Fungus Amanita Phalloides Was Introduced and Is
Molecular Ecology (2009) doi: 10.1111/j.1365-294X.2008.04030.x TheBlackwell Publishing Ltd ectomycorrhizal fungus Amanita phalloides was introduced and is expanding its range on the west coast of North America ANNE PRINGLE,* RACHEL I. ADAMS,† HUGH B. CROSS* and THOMAS D. BRUNS‡ *Department of Organismic and Evolutionary Biology, Biological Laboratories, 16 Divinity Avenue, Harvard University, Cambridge, MA 02138, USA, †Department of Biological Sciences, Gilbert Hall, Stanford University, Stanford, CA 94305-5020, USA, ‡Department of Plant and Microbial Biology, 111 Koshland Hall, University of California, Berkeley, CA 94720, USA Abstract The deadly poisonous Amanita phalloides is common along the west coast of North America. Death cap mushrooms are especially abundant in habitats around the San Francisco Bay, California, but the species grows as far south as Los Angeles County and north to Vancouver Island, Canada. At different times, various authors have considered the species as either native or introduced, and the question of whether A. phalloides is an invasive species remains unanswered. We developed four novel loci and used these in combination with the EF1α and IGS loci to explore the phylogeography of the species. The data provide strong evidence for a European origin of North American populations. Genetic diversity is generally greater in European vs. North American populations, suggestive of a genetic bottleneck; polymorphic sites of at least two loci are only polymorphic within Europe although the number of individuals sampled from Europe was half the number sampled from North America. Endemic alleles are not a feature of North American populations, although alleles unique to different parts of Europe were common and were discovered in Scandinavian, mainland French, and Corsican individuals. -
Diversity of MSDIN Family Members in Amanitin-Producing Mushrooms
He et al. BMC Genomics (2020) 21:440 https://doi.org/10.1186/s12864-020-06857-8 RESEARCH ARTICLE Open Access Diversity of MSDIN family members in amanitin-producing mushrooms and the phylogeny of the MSDIN and prolyl oligopeptidase genes Zhengmi He, Pan Long, Fang Fang, Sainan Li, Ping Zhang and Zuohong Chen* Abstract Background: Amanitin-producing mushrooms, mainly distributed in the genera Amanita, Galerina and Lepiota, possess MSDIN gene family for the biosynthesis of many cyclopeptides catalysed by prolyl oligopeptidase (POP). Recently, transcriptome sequencing has proven to be an efficient way to mine MSDIN and POP genes in these lethal mushrooms. Thus far, only A. palloides and A. bisporigera from North America and A. exitialis and A. rimosa from Asia have been studied based on transcriptome analysis. However, the MSDIN and POP genes of many amanitin-producing mushrooms in China remain unstudied; hence, the transcriptomes of these speices deserve to be analysed. Results: In this study, the MSDIN and POP genes from ten Amanita species, two Galerina species and Lepiota venenata were studied and the phylogenetic relationships of their MSDIN and POP genes were analysed. Through transcriptome sequencing and PCR cloning, 19 POP genes and 151 MSDIN genes predicted to encode 98 non- duplicated cyclopeptides, including α-amanitin, β-amanitin, phallacidin, phalloidin and 94 unknown peptides, were found in these species. Phylogenetic analysis showed that (1) MSDIN genes generally clustered depending on the taxonomy of the genus, while Amanita MSDIN genes clustered depending on the chemical substance; and (2) the POPA genes of Amanita, Galerina and Lepiota clustered and were separated into three different groups, but the POPB genes of the three distinct genera were clustered in a highly supported monophyletic group. -
Amatoxin Mushroom Poisoning in North America 2015-2016 by Michael W
Amatoxin Mushroom Poisoning in North America 2015-2016 By Michael W. Beug PhD Chair NAMA Toxicology Committee Assessing the degree of amatoxin mushroom poisoning in North America is very challenging. Understanding the potential for various treatment practices is even more daunting. Although I have been studying mushroom poisoning for 45 years now, my own views on potential best treatment practices are still evolving. While my training in enzyme kinetics helps me understand the literature about amatoxin poisoning treatments, my lack of medical training limits me. Fortunately, critical comments from six different medical doctors have been incorporated in this article. All six, each concerned about different aspects in early drafts, returned me to the peer reviewed scientific literature for additional reading. There remains no known specific antidote for amatoxin poisoning. There have not been any gold standard double-blind placebo controlled studies. There never can be. When dealing with a potentially deadly poisoning (where in many non-western countries the amatoxin fatality rate exceeds 50%) treating of half of all poisoning patients with a placebo would be unethical. Using amatoxins on large animals to test new treatments (theoretically a great alternative) has ethical constraints on the experimental design that would most likely obscure the answers researchers sought. We must thus make our best judgement based on analysis of past cases. Although that number is now large enough that we can make some good assumptions, differences of interpretation will continue. Nonetheless, we may be on the cusp of reaching some agreement. Towards that end, I have contacted several Poison Centers and NAMA will be working with the Center for Disease Control (CDC). -
Toxic Fungi of Western North America
Toxic Fungi of Western North America by Thomas J. Duffy, MD Published by MykoWeb (www.mykoweb.com) March, 2008 (Web) August, 2008 (PDF) 2 Toxic Fungi of Western North America Copyright © 2008 by Thomas J. Duffy & Michael G. Wood Toxic Fungi of Western North America 3 Contents Introductory Material ........................................................................................... 7 Dedication ............................................................................................................... 7 Preface .................................................................................................................... 7 Acknowledgements ................................................................................................. 7 An Introduction to Mushrooms & Mushroom Poisoning .............................. 9 Introduction and collection of specimens .............................................................. 9 General overview of mushroom poisonings ......................................................... 10 Ecology and general anatomy of fungi ................................................................ 11 Description and habitat of Amanita phalloides and Amanita ocreata .............. 14 History of Amanita ocreata and Amanita phalloides in the West ..................... 18 The classical history of Amanita phalloides and related species ....................... 20 Mushroom poisoning case registry ...................................................................... 21 “Look-Alike” mushrooms ..................................................................................... -
<I>Pinus Albicaulis
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 Mycotaxon, Ltd. ©2017 July–September 2017—Volume 132, pp. 665–676 https://doi.org/10.5248/132.665 Amanita alpinicola sp. nov., associated with Pinus albicaulis, a western 5-needle pine Cathy L. Cripps1*, Janet E. Lindgren2 & Edward G. Barge1 1 Plant Sciences and Plant Pathology Department, Montana State University, 119 Plant BioScience Building, Bozeman, MT 59717, USA 2 705 N. E. 107 Street, Vancouver, WA. 98685, USA. * Correspondence to: [email protected] Abstract—A new species, Amanita alpinicola, is proposed for specimens fruiting under high elevation pines in Montana, conspecific with specimens from Idaho previously described under the invalid name, “Amanita alpina A.H. Sm., nom. prov.” Montana specimens originated from five-needle whitebark pine (Pinus albicaulis) forests where they fruit in late spring to early summer soon after snow melt; sporocarps are found mostly half-buried in soil. The pileus is cream to pale yellow with innate patches of volval tissue, the annulus is sporadic, and the volva is present as a tidy cup situated below ragged tissue on the stipe. Analysis of the ITS region places the new species in A. sect Amanita and separates it from A. gemmata, A. pantherina, A. aprica, and the A. muscaria group; it is closest to the A. muscaria group. Key words—Amanitaceae, ectomycorrhizal, ITS sequences, stone pine, taxonomy Introduction In 1954, mycologist Alexander H. Smith informally described an Amanita species from the mountains of western Idaho [see Addendum on p. 676]. He gave it the provisional name Amanita “alpina”, and this name has been used by subsequent collectors of this fungus in Washington, Idaho, and Montana.