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Copyright© 2017 Mediterranean Marine Science
Mediterranean Marine Science Vol. 18, 2017 Introduced marine macroflora of Lebanon and its distribution on the Levantine coast BITAR G. Lebanese University, Faculty of Sciences, Hadaeth, Beirut, Lebanon RAMOS-ESPLÁ A. Centro de Investigación Marina de Santa Pola (CIMAR), Universidad de Alicante, 03080 Alicante OCAÑA O. Departamento de Oceanografía Biológica y Biodiversidad, Fundación Museo del Mar, Muelle Cañonero Dato s.n, 51001 Ceuta SGHAIER Y. Regional Activity Centre for Specially Protected Areas (RAC/SPA) FORCADA A. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante VALLE C. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante EL SHAER H. IUCN (International Union for Conservation of Nature), Regional Office for West Asia Sweifiyeh, Hasan Baker Al Azazi St. no 20 - Amman VERLAQUE M. Aix Marseille University, CNRS/INSU, Université de Toulon, IRD, Mediterranean Institute of Oceanography (MIO), UM 110, GIS Posidonie, 13288 Marseille http://dx.doi.org/10.12681/mms.1993 Copyright © 2017 Mediterranean Marine Science http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 04/08/2019 04:30:09 | To cite this article: BITAR, G., RAMOS-ESPLÁ, A., OCAÑA, O., SGHAIER, Y., FORCADA, A., VALLE, C., EL SHAER, H., & VERLAQUE, M. (2017). Introduced marine macroflora of Lebanon and its distribution on the Levantine coast. Mediterranean Marine Science, 18(1), 138-155. doi:http://dx.doi.org/10.12681/mms.1993 http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 04/08/2019 04:30:09 | Review Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net DOI: http://dx.doi.org/10.12681/mms.1993 The introduced marine macroflora of Lebanon and its distribution on the Levantine coast G. -
Rhodomelaceae, Rhodophyta) Based on Molecular Analyses and Morphological Observations of Specimens from the Type Locality in Western Australia
Phytotaxa 324 (1): 051–062 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.324.1.3 The phylogenetic position of Polysiphonia scopulorum (Rhodomelaceae, Rhodophyta) based on molecular analyses and morphological observations of specimens from the type locality in Western Australia JOHN M. HUISMAN1, BYEONGSEOK KIM2 & MYUNG SOOK KIM2* 1Western Australian Herbarium, Department of Biodiversity, Conservation and Attractions, Locked Bag 104, Bentley Delivery Centre, Western Australia 6983, Australia; and School of Veterinary and Life Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia 2Department of Biology, Jeju National University, Jeju 63243, Korea *Author for correspondence. Email: [email protected] Abstract Considerable uncertainty surrounds the phylogenetic position of Polysiphonia scopulorum, a species with an apparently cos- mopolitan distribution. Here we report, for the first time, molecular phylogenetic analyses using plastid rbcL gene sequences and morphological observations of P. scopulorum collected from the type locality, Rottnest Island in Western Australia. Mor- phological characteristics of the Rottnest Island specimens allowed unequivocal identification, however, the sequence analy- ses uncovered discrepancies in previous molecular studies that included specimens identified as P. scopulorum from other locations. The phylogenetic evidence clearly revealed that P. scopulorum from Rottnest Island formed a sister clade with P. caespitosa from Spain (JX828149 as P. scopulorum) with moderate support, but that it differed from specimens identified as P. scopulorum from the U.S.A. (AY396039, EU492915). In light of this, we suggest that P. scopulorum be considered an endemic species with a distribution restricted to Australia. -
The Introduction of the Asian Red Algae Melanothamnus Japonicus
diversity Article The Introduction of the Asian Red Algae Melanothamnus japonicus (Harvey) Díaz-Tapia & Maggs in Peru as a Means to Adopt Management Strategies to Reduce Invasive Non-Indigenous Species Julissa J. Sánchez-Velásquez , Lorenzo E. Reyes-Flores , Carmen Yzásiga-Barrera and Eliana Zelada-Mázmela * Laboratory of Genetics, Physiology, and Reproduction, Faculty of Sciences, Universidad Nacional del Santa, Chimbote 02801, Peru; [email protected] (J.J.S.-V.); [email protected] (L.E.R.-F.); [email protected] (C.Y.-B.) * Correspondence: [email protected] Abstract: Early detection of non-indigenous species is crucial to reduce, mitigate, and manage their impacts on the ecosystems into which they were introduced. However, assessment frameworks for identifying introduced species on the Pacific Coast of South America are scarce and even non-existent for certain countries. In order to identify species’ boundaries and to determine the presence of non-native species, through morphological examinations and the analysis of the plastid ribulose-1,5- Citation: Sánchez-Velásquez, J.J.; rbc Reyes-Flores, L.E.; Yzásiga-Barrera, bisphosphate carboxylase/oxygenase large subunit ( L-5P) gene, we investigated the phylogenetic C.; Zelada-Mázmela, E. The relationships among species of the class Florideophyceae from the coast of Ancash, Peru. The rbcL-5P Introduction of the Asian Red Algae dataset revealed 10 Florideophyceae species distributed in the following four orders: Gigartinales, Melanothamnus japonicus (Harvey) Ceramiales, Halymeniales, and Corallinales, among which the Asian species, Melanothamnus japonicus Díaz-Tapia & Maggs in Peru as a (Harvey) Díaz-Tapia & Maggs was identified. M. japonicus showed a pairwise divergence of 0% Means to Adopt Management with sequences of M. -
SPECIAL PUBLICATION 6 the Effects of Marine Debris Caused by the Great Japan Tsunami of 2011
PICES SPECIAL PUBLICATION 6 The Effects of Marine Debris Caused by the Great Japan Tsunami of 2011 Editors: Cathryn Clarke Murray, Thomas W. Therriault, Hideaki Maki, and Nancy Wallace Authors: Stephen Ambagis, Rebecca Barnard, Alexander Bychkov, Deborah A. Carlton, James T. Carlton, Miguel Castrence, Andrew Chang, John W. Chapman, Anne Chung, Kristine Davidson, Ruth DiMaria, Jonathan B. Geller, Reva Gillman, Jan Hafner, Gayle I. Hansen, Takeaki Hanyuda, Stacey Havard, Hirofumi Hinata, Vanessa Hodes, Atsuhiko Isobe, Shin’ichiro Kako, Masafumi Kamachi, Tomoya Kataoka, Hisatsugu Kato, Hiroshi Kawai, Erica Keppel, Kristen Larson, Lauran Liggan, Sandra Lindstrom, Sherry Lippiatt, Katrina Lohan, Amy MacFadyen, Hideaki Maki, Michelle Marraffini, Nikolai Maximenko, Megan I. McCuller, Amber Meadows, Jessica A. Miller, Kirsten Moy, Cathryn Clarke Murray, Brian Neilson, Jocelyn C. Nelson, Katherine Newcomer, Michio Otani, Gregory M. Ruiz, Danielle Scriven, Brian P. Steves, Thomas W. Therriault, Brianna Tracy, Nancy C. Treneman, Nancy Wallace, and Taichi Yonezawa. Technical Editor: Rosalie Rutka Please cite this publication as: The views expressed in this volume are those of the participating scientists. Contributions were edited for Clarke Murray, C., Therriault, T.W., Maki, H., and Wallace, N. brevity, relevance, language, and style and any errors that [Eds.] 2019. The Effects of Marine Debris Caused by the were introduced were done so inadvertently. Great Japan Tsunami of 2011, PICES Special Publication 6, 278 pp. Published by: Project Designer: North Pacific Marine Science Organization (PICES) Lori Waters, Waters Biomedical Communications c/o Institute of Ocean Sciences Victoria, BC, Canada P.O. Box 6000, Sidney, BC, Canada V8L 4B2 Feedback: www.pices.int Comments on this volume are welcome and can be sent This publication is based on a report submitted to the via email to: [email protected] Ministry of the Environment, Government of Japan, in June 2017. -
Marine Species Distributions: from Data to Predictive Models
Marine Species Distributions: From data to predictive models Samuel Bosch Promoter: Prof. Dr. Olivier De Clerck Thesis submitted in partial fulfilment of the requirements for the degree of Doctor (PhD) in Science – Biology Academic year 2016-2017 Members of the examination committee Prof. Dr. Olivier De Clerck - Ghent University (Promoter)* Prof. Dr. Tom Moens – Ghent University (Chairman) Prof. Dr. Elie Verleyen – Ghent University (Secretary) Prof. Dr. Frederik Leliaert – Botanic Garden Meise / Ghent University Dr. Tom Webb – University of Sheffield Dr. Lennert Tyberghein - Vlaams Instituut voor de Zee * non-voting members Financial support This thesis was funded by the ERANET INVASIVES project (EU FP7 SEAS-ERA/INVASIVES SD/ER/010) and by VLIZ as part of the Flemish contribution to the LifeWatch ESFRI. Table of contents Chapter 1 General Introduction 7 Chapter 2 Fishing for data and sorting the catch: assessing the 25 data quality, completeness and fitness for use of data in marine biogeographic databases Chapter 3 sdmpredictors: an R package for species distribution 49 modelling predictor datasets Chapter 4 In search of relevant predictors for marine species 61 distribution modelling using the MarineSPEED benchmark dataset Chapter 5 Spatio-temporal patterns of introduced seaweeds in 97 European waters, a critical review Chapter 6 A risk assessment of aquarium trade introductions of 119 seaweed in European waters Chapter 7 Modelling the past, present and future distribution of 147 invasive seaweeds in Europe Chapter 8 General discussion 179 References 193 Summary 225 Samenvatting 229 Acknowledgements 233 Chapter 1 General Introduction 8 | C h a p t e r 1 Species distribution modelling Throughout most of human history knowledge of species diversity and their respective distributions was an essential skill for survival and civilization. -
Offprint Checklist of Mediterranean Seaweeds
Offprint Botanica Marina Vol. 44, 2001, pp. 425Ϫ460 Ą 2001 by Walter de Gruyter · Berlin · New York Checklist of Mediterranean Seaweeds. III. Rhodophyceae Rabenh. 1. Ceramiales Oltm. A. Go´mez Garretaa*, T. Gallardob, M. A. Riberaa, M. Cormacic, G. Furnaric, G. Giacconec and C. F. Boudouresqued a Laboratori de Bota`nica, Facultat de Farma`cia, Universitat de Barcelona, 08028 Barcelona, Spain b Departamento de Biologı´a Vegetal I, Facultad de Biologı´a, Universidad Complutense, 28040 Madrid, Spain c Dipartimento di Botanica dell’Universita`, Via A. Longo 19, 95125 Catania, Italy d L. B. M. E. B., Faculte´ des Sciences de Luminy, 13288 Marseille Cedex 9, France * Corresponding author An annotated checklist of the Ceramiales (Rhodophyceae; red algae) of the Mediterranean, based on literature records, is given. The distribution of each taxon in the area (which is divided into 16 regions) is reported. The number of species and infraspecific taxa of this group accepted for the Mediterranean Sea as currently recognised taxonomically is 271. This list has benefited from the suggestions on taxonomy, nomenclature and regional distribution made by phycological advisers for each region. Introduction (Gallardo et al. 1993). The Rhodophyceae will be compiled in three parts, the first of which includes This checklist of Mediterranean seaweeds is intended the Ceramiales. The number of specific and infraspe- to be a catalogue of benthic algal taxa of the Mediter- cific taxa of this order accepted for the Mediterra- ranean Sea, including the Rhodophyceae s.l., Fuco- nean Sea under current taxonomy is 270. phyceae (Phaeophyceae) and Chlorophyceae s.l. The This list has been compiled following the scheme Fucophyceae were treated in the first part (Ribera et used in the first part of this series (Ribera et al. -
The Phylogenetic Position of Polysiphonia Scopulorum
Phytotaxa 324 (1): 051–062 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.324.1.3 The phylogenetic position of Polysiphonia scopulorum (Rhodomelaceae, Rhodophyta) based on molecular analyses and morphological observations of specimens from the type locality in Western Australia JOHN M. HUISMAN1, BYEONGSEOK KIM2 & MYUNG SOOK KIM2* 1Western Australian Herbarium, Department of Biodiversity, Conservation and Attractions, Locked Bag 104, Bentley Delivery Centre, Western Australia 6983, Australia; and School of Veterinary and Life Sciences, Murdoch University, Murdoch, Western Australia 6150, Australia 2Department of Biology, Jeju National University, Jeju 63243, Korea *Author for correspondence. Email: [email protected] Abstract Considerable uncertainty surrounds the phylogenetic position of Polysiphonia scopulorum, a species with an apparently cos- mopolitan distribution. Here we report, for the first time, molecular phylogenetic analyses using plastid rbcL gene sequences and morphological observations of P. scopulorum collected from the type locality, Rottnest Island in Western Australia. Mor- phological characteristics of the Rottnest Island specimens allowed unequivocal identification, however, the sequence analy- ses uncovered discrepancies in previous molecular studies that included specimens identified as P. scopulorum from other locations. The phylogenetic evidence clearly revealed that P. scopulorum from Rottnest Island formed a sister clade with P. caespitosa from Spain (JX828149 as P. scopulorum) with moderate support, but that it differed from specimens identified as P. scopulorum from the U.S.A. (AY396039, EU492915). In light of this, we suggest that P. scopulorum be considered an endemic species with a distribution restricted to Australia. -
K "Put (Rhodomelaceae) from Carrie Bow Cay and Vicinity, Belize
(" 26( The Red Alga Polysiphonia Greville K "Put (Rhodomelaceae) from Carrie Bow Cay and Vicinity, Belize Donald F. Kapraun Laboratorro de Fr I andJames N Norris Departamento de e~orog~S Facurta fO·C'gla d de C/enl;.;/as UNAM Several detailed studies of the taxonomy, dis ABSTRACT tribution, and geographic variation of Polysiphonia Seven taxa of the red alga Polysiphonia Greville have increased our knowledge of its members. In (Rhodomelaceae; Ceramiales) were found near the Pacific Ocean, studies have covered the coasts Carrie Bow Cay and Twin Cays in the central of North America (Hollenberg, 1942, 1944), in region of the Belizean barrier reef. Polysiphonia cluding Mexico (Hollenberg, 1961), and the exilis and P. Jlaccidissima are new records for the northern Gulf of California (Hollenberg and Nor Caribbean marine flora, P. atlantica, P. denudata, P. ferulacea, P. scopulorum var. uillum, and P. sphaer ris, 1977); Hawaii (Meiiez, 1964); the central and ocarpa are new to Belize. Polysiphonia atlantica is western tropical Pacific (Hollenberg, 1968a, given as a new name for the preoccupied name 1968b); southern Australia (Womersley, 1979); P. macrocarpa Harvey. Most species occur as epi and Japan (Segi, 1951). In the Atlantic Ocean, phytes on other algae, commonly on Sargassum work has focused on the coasts of North Carolina and Dictyota. Polysiphonia ferulacea and P. sphaero carpa are also found entangled in algal turfs, and and Texas (Kapraun, 1977, 1979); Brazil (Oliv P. scopulorum var. inllum also occurs on mangrove eira Filho, 1969); Portugal (Ardre, 1970); and the roots. western Mediterranean (La uret, 1967, 1970). We relied mainly on the following morpholog ical features in distinguishing the taxa of Polysi phonia: number of pericentral cells ; presence or Introduction absence of cortication; kind and position oforigin of the attachment rhizoids; nature and position Only two species of Polysiphonia Greville (1824) of trichoblasts; and nature of the spermatangial have been recorded previously from Belize (Brit branchlets. -
Working Group on Introductions and Transfers of Marine Organisms (WGITMO)
ICES WGITMO Report 2006 ICES Advisory Committee on the Marine Environment ICES CM 2006/ACME:05 Working Group on Introductions and Transfers of Marine Organisms (WGITMO) 16–17 March 2006 Oostende, Belgium International Council for the Exploration of the Sea Conseil International pour l’Exploration de la Mer H.C. Andersens Boulevard 44-46 DK-1553 Copenhagen V Denmark Telephone (+45) 33 38 67 00 Telefax (+45) 33 93 42 15 www.ices.dk [email protected] Recommended format for purposes of citation: ICES. 2006. Working Group on Introductions and Transfers of Marine Organisms (WGITMO), 16–17 March 2006, Oostende, Belgium. ICES CM 2006/ACME:05. 334 pp. For permission to reproduce material from this publication, please apply to the General Secretary. The document is a report of an Expert Group under the auspices of the International Council for the Exploration of the Sea and does not necessarily represent the views of the Council. © 2006 International Council for the Exploration of the Sea. ICES WGITMO Report 2006 | i Contents 1 Summary ........................................................................................................................................ 1 2 Opening of the meeting and introduction.................................................................................... 5 3 Terms of reference, adoption of agenda, selection of rapporteur.............................................. 5 3.1 Terms of Reference ............................................................................................................... 5 3.2 Adoption -
IMARES Wageningen UR (IMARES - Institute for Marine Resources & Ecosystem Studies)
High risk exotic species with respect to shellfish transports from the Oosterschelde to the Wadden Sea A. M. van den Brink and J.W.M. Wijsman Report number C025/10 ~Foto (aan te leveren door projectleider)~ IMARES Wageningen UR (IMARES - institute for Marine Resources & Ecosystem Studies) Client: LNV Directie Kennis Postbus 20401 2500 EK DEN HAAG Bas code: BO-07-002-902 Publication Date: 6 April 2010 Report Number C025/10 1 of 47 IMARES is: • an independent, objective and authoritative institute that provides knowledge necessary for an integrated sustainable protection, exploitation and spatial use of the sea and coastal zones; • an institute that provides knowledge necessary for an integrated sustainable protection, exploitation and spatial use of the sea and coastal zones; • a key, proactive player in national and international marine networks (including ICES and EFARO). © 2010 IMARES Wageningen UR IMARES, institute of Stichting DLO is The Management of IMARES is not responsible for resulting damage, as well as for registered in the Dutch trade record damage resulting from the application of results or research obtained by IMARES, nr. 09098104, its clients or any claims related to the application of information found within its BTW nr. NL 806511618 research. This report has been made on the request of the client and is wholly the client's property. This report may not be reproduced and/or published partially or in its entirety without the express written consent of the client. A_4_3_2-V9.1 2 of 47 Report Number C025/10 Contents Summary ........................................................................................................................... 5 1 Introduction .............................................................................................................. 6 2 Materials and Methods............................................................................................... 7 3 Results.................................................................................................................... -
Mediterranean Marine Science
Mediterranean Marine Science Vol. 18, 2017 Introduced marine macroflora of Lebanon and its distribution on the Levantine coast BITAR G. Lebanese University, Faculty of Sciences, Hadaeth, Beirut, Lebanon RAMOS-ESPLÁ A. Centro de Investigación Marina de Santa Pola (CIMAR), Universidad de Alicante, 03080 Alicante OCAÑA O. Departamento de Oceanografía Biológica y Biodiversidad, Fundación Museo del Mar, Muelle Cañonero Dato s.n, 51001 Ceuta SGHAIER Y. Regional Activity Centre for Specially Protected Areas (RAC/SPA) FORCADA A. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante VALLE C. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante EL SHAER H. IUCN (International Union for Conservation of Nature), Regional Office for West Asia Sweifiyeh, Hasan Baker Al Azazi St. no 20 - Amman VERLAQUE M. Aix Marseille University, CNRS/INSU, Université de Toulon, IRD, Mediterranean Institute of Oceanography (MIO), UM 110, GIS Posidonie, 13288 Marseille http://dx.doi.org/10.12681/mms.1993 Copyright © 2017 http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 30/06/2017 15:02:43 | To cite this article: BITAR, RAMOS-ESPLÁ, OCAÑA, SGHAIER, FORCADA, . ., & VERLAQUE (2017). Introduced marine macroflora of Lebanon and its distribution on the Levantine coast. Mediterranean Marine Science, 18, 138-155. http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 30/06/2017 15:02:43 | Review Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net DOI: http://dx.doi.org/10.12681/mms.1993 The introduced marine macroflora of Lebanon and its distribution on the Levantine coast G. -
Investigating Diversity, Evolution, Development and Physiology of Red Algal Parasites from New Zealand
Investigating diversity, evolution, development and physiology of red algal parasites from New Zealand BY MAREN PREUSS A thesis submitted to Victoria University of Wellington in fulfilment of the requirements for the degree of Doctor of Philosophy Victoria University of Wellington Te Whare Wānanga o te Ūpoko o te Ika a Māui (2018) ii This thesis was conducted under the supervision of Associate Professor Joe Zuccarello (Primary Supervisor) Victoria University of Wellington, Wellington, New Zealand and Professor Wendy Nelson (Secondary Supervisor) National Institute of Atmospheric Research, Wellington, New Zealand and University of Auckland, Auckland, New Zealand iii iv Abstract Red algal parasites have evolved independently over a 100 times and grow only on other red algal hosts. Most parasites are closely related to their host based on the similarity of their reproductive structures. Secondary pit connections between red algal parasites and their hosts are used to transfer parasite organelles and nuclei into host cells. Morphological and physiological changes in infected host cells have been observed in some species. Parasite mitochondrial genomes are similar in size and gene content to free-living red algae whereas parasite plastids are highly reduced. Overall, red algal parasites are poorly studied and thus the aim of this study was to increase the general knowledge of parasitic taxa with respect to their diversity, evolutionary origin, development, physiology, and organelle evolution. Investigation of the primary literature showed that most species descriptions of red algal parasites were poor and did not meet the criteria for defining a parasitic relationship. This literature study also revealed a lack of knowledge of many key parasitic processes including early parasite development, host cell “control”, and parasite origin.