Species Identification Guide
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Diagramma Pictum (Thunberg. 1792)
Diagramma pictum (Thunberg. 1792) English Name: Painted sweetlips Family: HAEMULIDAE Local Name: Kilanbu guruva Order: Perciformes Size: Max. 90 cm Specimen: MRS/P048 1/97 Distinctive Characters: Dorsal fin with 9-10 spines and 17-20 rays. Anal fin with 3 spines and 7 rays. Pectoral fin with 16-17 rays. Second dorsal spine much longer than the first. 20 to 25 scales between lateral line and dorsal fin origin. Scales small and ctenoid. Mouth small, lips thick. Colour: Adults light grey with scattered large blackish blotches on sides, white on belly. Juveniles with conspicuous alternating black and white stripes, and yellowish on headand belly. Stripes eventually break up into spots that disappear in adults. Habitat and Biology: Found on shallow coastal areas and coral reefs down to a depth of 80 rn. Most common on silty areas. Feeds on bottom invertebrates and fish. Distribution: Indo-West Pacific. Remarks: Di gramma picluni can easily be distinguished from other sweetlips by its short. first dorsal spine and second (with the third) abruptly the longest. 172 Plectorhinchus albovittatus (Ruppell, 1838) English Name: Giant sweetlips Family: HAEMULIDAE Local Name: Maa guruva Order: Perciformes Size: Max. 1 m Specimen: MRS/P030l/88 Distinctive Characters: Dorsal fin with 13 spines and 18-19 rays. Anal fin with 3 spines and 7 rays. Pectoral fin 17 rays. Lips greatly enlarged. Caudal fin slightly emarginate. Colour: Adults dark grey with numerous pale spots and short irregular lines. Usually a broad diffused pale bar just behind pectoral fins, extending onto abdomen. Soft portion of dorsal fin and lobes of caudal fin with large black areas. -
RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected]
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 6-25-2014 RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, and the Molecular Biology Commons Scholar Commons Citation Ulrich, Robert Michael, "RNA Detection Technology for Applications in Marine Science: Microbes to Fish" (2014). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/5321 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. RNA Detection Technology for Applications in Marine Science: Microbes to Fish by Robert M. Ulrich A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy College of Marine Science University of South Florida Major Professor: John H. Paul, Ph.D. Valerie J. Harwood, Ph.D. Mya Breitbart, Ph.D. Christopher D. Stallings, Ph.D. David E. John, Ph.D. Date of Approval June 25, 2014 Keywords: NASBA, grouper, Karenia mikimotoi, Enterococcus Copyright © 2014, Robert M. Ulrich DEDICATION This dissertation is dedicated to my fiancée, Dr. Shannon McQuaig for inspiring my return to graduate school and her continued support over the last four years. On no other porch in our little town have there been more impactful scientific discussions, nor more words of encouragement. ACKNOWLEDGMENTS I gratefully acknowledge the many people who have encouraged and advised me throughout my graduate studies. -
Lethrinus Reticulatus Valenciennes, 1830 Frequent Synonyms / Misidentifications: None / None
click for previous page Perciformes: Percoidei: Lethrinidae 3041 Lethrinus reticulatus Valenciennes, 1830 Frequent synonyms / misidentifications: None / None. FAO names: En - Redsnout emperor. Diagnostic characters: Body moderately elongate, its depth 2.8 to 3.3 times in standard length. Head length 1.1 to 1.2 times in body depth, 2.5 to 2.8 times in standard length, dorsal profile near eye convex or nearly straight; snout length about 1.9 to 2.4 times in head length, measured without the lip the snout is 0.8 to 0.9 times in cheek height, its dorsal profile concave, snout angle relative to upper jaw between 50° and 60°; interorbital space flat or concave; posterior nostril a longitudinal oblong opening, closer to orbit than anterior nostril; eye situated close to dorsal profile, its length 3.3 to 4.3 times in head length; cheek height 2.7 to 3.4 times in head length; lateral teeth in jaws conical; outer surface of maxilla usually smooth. Dorsal fin with X spines and 9 soft rays, the third dorsal-fin spine the longest, its length 2 to 2.8 times in body depth; anal fin with III spines and 8 soft rays, the first soft ray usually the longest, its length almost equal to, shorter, or slightly longer than length of base of soft-rayed portion of anal fin and 1.4 to 1.8 times in length of entire anal-fin base; pectoral-fin rays 13; pelvic-fin membranes between rays closest to body without dense melanophores. Lateral-line scales 46 to 48; cheek without scales; 4 ½ scale rows between lateral line and base of middle dorsal-fin spines; 15 or 16 scale rows in transverse series between origin of anal fin and lateral line; usually 15 rows in lower series of scales around caudal peduncle; 7 to 10 scales in supratemporal patch; inner surface of pectoral-fin base without scales; posterior angle of operculum fully scaly. -
Fully Understood
Front cover: Giant grouper (Epinephelus lanceolatus) with juvenile golden trevally (Gnathanodon speciosus) swimming above a mound of Pavona cactus on a mid- shelf reef in the northern Great Barrier Reef Marine Park. Photo by Andrew Bruckner. Back Cover: A large stand of staghorn coral, Acropora spp. on Wood Reef. Photo by Ken Marks. Khaled bin Sultan Living Oceans Foundation 8181 Professional Place Landover, MD, 20785 USA Philip G. Renaud, Executive Director http://www.livingoceansfoundation.org All research was completed under research permit G14/36867.1 issued on 15 August 2014. The use and entry into zones in the Amalgamated Great Barrier Reef Marine Park Section and the Great Barrier Reef Coast Marine Park were identified and authorized under permit G14/372021 issued on 28 August, 2014. This report was developed as one component of the Global Reef Expedition: Great Barrier Reef research project to meet one of the requirements of the research permits approved by the Great Barrier Reef Marine Park Authority (GBRMPA). All images are by Andrew Bruckner unless noted otherwise. All maps were completed by Alexandra Dempsey. Dec. 15, 2014. Citation: Global Reef Expedition: Great Barrier Reef, Australia. Field Report. Bruckner, A.W. (2014). Khaled bin Sultan Living Oceans Foundation, Landover MD. pp. 31. The Khaled bin Sultan Living Oceans Foundation (KSLOF) was incorporated in California as a 501(c)(3), public benefit, Private Operating Foundation in September 2000. KSLOF headquarters are in Washington DC. The Living Oceans Foundation is dedicated to the conservation and restoration of oceans of the world, and champions their preservation through research, education, and a commitment to Science Without Borders®. -
Of Abu Dhabi Emirate, United Arab Emirates MARINE and COASTAL ENVIRONMENTS of ABU DHABI EMIRATE, UNITED ARAB EMIRATES
of Abu Dhabi Emirate, United Arab Emirates MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES Page . II of Abu Dhabi Emirate, United Arab Emirates Page . III MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES Page . IV MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES H. H. Sheikh Khalifa bin Zayed Al Nahyan President of the United Arab Emirates Page . V MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES Page . VI MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES H. H. Sheikh Mohammed bin Zayed Al Nahyan Crown Prince of Abu Dhabi, Deputy Supreme Commander of the UAE Armed Forces Page . VII MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES Page . VIII MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES H. H. Sheikh Hamdan bin Zayed Al Nahyan Deputy Prime Minister Page . IX MARINE AND COASTAL ENVIRONMENTS OF ABU DHABI EMIRATE, UNITED ARAB EMIRATES s\*?*c*i]j6.%;M"%&9+~)#"$*&ENL`\&]j6. =';78G=%1?%&'12= !"##$" 9<8*TPEg-782#,On%O)6=]KL %&'( )*+,-. 2#,On#X%3G=FON&$4#*.%&9+~)#"$*&XNL %?)#$*&E, &]1TL%&9+%?)':5=&4O`(.#`g-78 %!/ اﻷوراق اﻟﻘﻄﺎﻋﻴﺔ fJT=V-=>?#Fk9+*#$'&= /%*?%=*<(/8>OhT7.F 012(.%34#56.%-78&9+:;(<=>=?%@8'-/ABC $L#01i%;1&&!580.9,q@EN(c D)=EF%3G&H#I7='J=:KL)'MD*7.%&'-(8=';78G=NO D)$8P#"%;QI8ABCRI7S;<#D*T(8%.I7)=U%#$#VW'.X JG&Bls`ItuefJ%27=PE%u%;QI8)aEFD)$8%7iI=H*L YZZ[\&F]17^)#G=%;/;!N_-LNL`%3;%87VW'.X NL]17~Is%1=fq-L4"#%;M"~)#"G=,|2OJ*c*TLNLV(ItuG= )aE0@##`%;Kb&9+*c*T(`d_-8efJG=g-78012 -
Appendices Appendices
APPENDICES APPENDICES APPENDIX 1 – PUBLICATIONS SCIENTIFIC PAPERS Aidoo EN, Ute Mueller U, Hyndes GA, and Ryan Braccini M. 2015. Is a global quantitative KL. 2016. The effects of measurement uncertainty assessment of shark populations warranted? on spatial characterisation of recreational fishing Fisheries, 40: 492–501. catch rates. Fisheries Research 181: 1–13. Braccini M. 2016. Experts have different Andrews KR, Williams AJ, Fernandez-Silva I, perceptions of the management and conservation Newman SJ, Copus JM, Wakefield CB, Randall JE, status of sharks. Annals of Marine Biology and and Bowen BW. 2016. Phylogeny of deepwater Research 3: 1012. snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of Braccini M, Aires-da-Silva A, and Taylor I. 2016. the Atlantic. Molecular Phylogenetics and Incorporating movement in the modelling of shark Evolution 100: 361-371. and ray population dynamics: approaches and management implications. Reviews in Fish Biology Bellchambers LM, Gaughan D, Wise B, Jackson G, and Fisheries 26: 13–24. and Fletcher WJ. 2016. Adopting Marine Stewardship Council certification of Western Caputi N, de Lestang S, Reid C, Hesp A, and How J. Australian fisheries at a jurisdictional level: the 2015. Maximum economic yield of the western benefits and challenges. Fisheries Research 183: rock lobster fishery of Western Australia after 609-616. moving from effort to quota control. Marine Policy, 51: 452-464. Bellchambers LM, Fisher EA, Harry AV, and Travaille KL. 2016. Identifying potential risks for Charles A, Westlund L, Bartley DM, Fletcher WJ, Marine Stewardship Council assessment and Garcia S, Govan H, and Sanders J. -
Comparisons Between the Biology of Two Species of Whiting (Sillaginidiae) in Shark Bay, Western Australia
Comparisons between the biology of two species of whiting (Sillaginidiae) in Shark Bay, Western Australia By Peter Coulson Submitted for the Honours Degree of Murdoch University August 2003 1 Abstract Golden-lined whiting Sillago analis and yellow-fin whiting Sillago schomburgkii were collected from waters within Shark Bay, which is located at ca 26ºS on the west coast of Australia. The number of circuli on the scales of S. analis was often less than the number of opaque zones in sectioned otoliths of the same fish. Furthermore, the number of annuli visible in whole otoliths of S. analis was often less than were detectable in those otoliths after sectioning. The magnitude of the discrepancies increased as the number of opaque zones increased. Consequently, the otoliths of S. analis were sectioned in order to obtain reliable estimates of age. The mean monthly marginal increments on sectioned otoliths of S. analis and S. schomburgkii underwent a pronounced decline in late spring/early summer and then rose progressively during summer and autumn. Since these trends demonstrated that opaque zones are laid down annually in the otoliths of S. analis and S. schomburgkii from Shark Bay, their numbers could be used to help age this species in this marine embayment. The von Bertalanffy growth parameters, L∞, k and to derived from the total lengths at age for individuals of S. analis , were 277 mm, 0.73 year -1 and 0.02 years, respectively, for females and 253 mm, 0.76 year -1 and 0.10 years, respectively. Females were estimated to attain lengths of 141, 211, 245 and 269 mm after 1, 2, 3 and 5 years, compared with 124, 192, 224 and 247 mm for males at the corresponding ages. -
APPENDIX 1 Classified List of Fishes Mentioned in the Text, with Scientific and Common Names
APPENDIX 1 Classified list of fishes mentioned in the text, with scientific and common names. ___________________________________________________________ Scientific names and classification are from Nelson (1994). Families are listed in the same order as in Nelson (1994), with species names following in alphabetical order. The common names of British fishes mostly follow Wheeler (1978). Common names of foreign fishes are taken from Froese & Pauly (2002). Species in square brackets are referred to in the text but are not found in British waters. Fishes restricted to fresh water are shown in bold type. Fishes ranging from fresh water through brackish water to the sea are underlined; this category includes diadromous fishes that regularly migrate between marine and freshwater environments, spawning either in the sea (catadromous fishes) or in fresh water (anadromous fishes). Not indicated are marine or freshwater fishes that occasionally venture into brackish water. Superclass Agnatha (jawless fishes) Class Myxini (hagfishes)1 Order Myxiniformes Family Myxinidae Myxine glutinosa, hagfish Class Cephalaspidomorphi (lampreys)1 Order Petromyzontiformes Family Petromyzontidae [Ichthyomyzon bdellium, Ohio lamprey] Lampetra fluviatilis, lampern, river lamprey Lampetra planeri, brook lamprey [Lampetra tridentata, Pacific lamprey] Lethenteron camtschaticum, Arctic lamprey] [Lethenteron zanandreai, Po brook lamprey] Petromyzon marinus, lamprey Superclass Gnathostomata (fishes with jaws) Grade Chondrichthiomorphi Class Chondrichthyes (cartilaginous -
Table of Fishes of Sydney Harbour 2019
Table of Fishes of Sydney Harbour 2019 Family Family/Com Species Species Common Notes mon Name Name Acanthuridae Surgeonfishe Acanthurus Eyestripe close s dussumieri Surgeonfish to southern li mit Acanthuridae Acanthurus Orangebloch close to olivaceus Surgeonfish southern limit Acanthuridae Acanthurus Convict close to triostegus Surgeonfish southern limit Acanthuridae Acanthurus Yellowmask xanthopterus Surgeonfish Acanthuridae Paracanthurus Blue Tang not included hepatus in species count Acanthuridae Prionurus Spotted Sawtail maculatus Acanthuridae Prionurus Australian Sawtail microlepidotus Ambassidae Glassfishes Ambassis Port Jackson jacksoniensis glassfish Ambassidae Ambassis marianus Estuary Glassfish Anguillidae Freshwater Anguilla australis Shortfin Eel Eels Anguillidae Anguilla reinhardtii Longfinned Eel Antennariidae Anglerfishes Antennarius Freckled Anglerfish southern limit coccineus Antennariidae Antennarius Giant Anglerfish close to commerson southen limit Antennariidae Antennarius Shaggy Anglerfish southern limit hispidus Antennariidae Antennarius pictus Painted Anglerfish Antennariidae Antennarius striatus Striate Anglerfish Table of Fishes of Sydney Harbour 2019 Antennariidae Histrio histrio Sargassum close to Anglerfish southen limit Antennariidae Porophryne Red-fingered erythrodactylus Anglerfish Aploactinidae Velvetfishes Aploactisoma Southern Velvetfish milesii Aploactinidae Cocotropus Patchwork microps Velvetfish Aploactinidae Paraploactis Bearded Velvetfish trachyderma Aplodactylidae Seacarps Aplodactylus Rock Cale -
Catalogue of Protozoan Parasites Recorded in Australia Peter J. O
1 CATALOGUE OF PROTOZOAN PARASITES RECORDED IN AUSTRALIA PETER J. O’DONOGHUE & ROBERT D. ADLARD O’Donoghue, P.J. & Adlard, R.D. 2000 02 29: Catalogue of protozoan parasites recorded in Australia. Memoirs of the Queensland Museum 45(1):1-164. Brisbane. ISSN 0079-8835. Published reports of protozoan species from Australian animals have been compiled into a host- parasite checklist, a parasite-host checklist and a cross-referenced bibliography. Protozoa listed include parasites, commensals and symbionts but free-living species have been excluded. Over 590 protozoan species are listed including amoebae, flagellates, ciliates and ‘sporozoa’ (the latter comprising apicomplexans, microsporans, myxozoans, haplosporidians and paramyxeans). Organisms are recorded in association with some 520 hosts including mammals, marsupials, birds, reptiles, amphibians, fish and invertebrates. Information has been abstracted from over 1,270 scientific publications predating 1999 and all records include taxonomic authorities, synonyms, common names, sites of infection within hosts and geographic locations. Protozoa, parasite checklist, host checklist, bibliography, Australia. Peter J. O’Donoghue, Department of Microbiology and Parasitology, The University of Queensland, St Lucia 4072, Australia; Robert D. Adlard, Protozoa Section, Queensland Museum, PO Box 3300, South Brisbane 4101, Australia; 31 January 2000. CONTENTS the literature for reports relevant to contemporary studies. Such problems could be avoided if all previous HOST-PARASITE CHECKLIST 5 records were consolidated into a single database. Most Mammals 5 researchers currently avail themselves of various Reptiles 21 electronic database and abstracting services but none Amphibians 26 include literature published earlier than 1985 and not all Birds 34 journal titles are covered in their databases. Fish 44 Invertebrates 54 Several catalogues of parasites in Australian PARASITE-HOST CHECKLIST 63 hosts have previously been published. -
Recreational Fishing in Western Australia
RECREATIONAL FISHING IN WESTERN AUSTRALIA NORTHERN FISH IDENTIFICATION GUIDE MARCH 2011 Cover: Spangled emperor (Lethrinus nebulosus) Photo: Shannon Conway Published by Department of Fisheries, Perth, Western Australia. Fisheries Occasional Publication No. 87, March 2011. ISSN: 1447 - 2058 ISBN: 978-1-921845-06-2 2 NORTHERN FISH IDENTIFICATION GUIDE ABOUT THIS GUIDE his guide has been developed to help you identify the Tmore common species within the Gascoyne and North Coast bioregions that you may encounter. The purpose of this recreational fishing guide is to greatly enhance consistent and accurate species identification. If you are unsure about a particular species (or if it is not in this guide), please discuss it with a representative of the Department of Fisheries, Western Australia. You can access additional information on the website www.fish.wa.gov.au Regions covered by this guide 114° 50' E North Coast Kununurra (Pilbara/Kimberley) Broome Gascoyne Coast Port Hedland Karratha 21°46' S Onslow A sh bur Exmouth ton R iver Carnarvon Denham 27°S Kalbarri Geraldton West Coast Eucla Perth Esperance Augusta Black Point Albany South Coast 115°30' E See Southern Fish Identfication Guide for these regions NORTHERN FISH IDENTIFICATION GUIDE 3 CONTENTS ABOUT THIS GUIDE ������������������������������������������������������ 3 OFFSHORE DEMERSAL ................................................. 5 INSHORE DEMERSAL .................................................... 5 NEARSHORE............................................................... 11 -
CARANGIDAE Local Name: Naruvaa Handhi Order: Perciformes Size: Max
Alectis ciliaris (Bloch, 1787) English Name: African pompano Family: CARANGIDAE Local Name: Naruvaa handhi Order: Perciformes Size: Max. 1.3 m Specimen: MRS/0501/97 Distinctive Characters: Dorsal fin with 7 short spines (invisible in larger ones) followed by 1 spine and 18-22 rays. Anal fin with 2 spines (embedded in larger ones) followed by 1 spine and 18-20 rays. Gill rakers lower limb first gill arch 12-17, excluding rudiments. Anterior rays long and filamentous injuveniles. Body deep and compressed. Forehead rounded. Colour: Silvery, with touch of metallic blue dorsally. Juveniles with 5 dark bars on body. Habitat and Biology: Adults solitary in coastal waters to depths of 100 m. Young usually pelagic and drifting. Feeds mainly on sedentary crustaceans. Distribution: Circumtropical. Remarks: The similar A. indicus also occurs in the Indian Ocean. Unlike Alectis ciliaris, A. indicus has an angularforehead, more gill rakers on lowerlimb of first gill arch (21-26 excluding rudiment), and is coloured silver with a green tinge dorsally. 124 Carangoides caeruleopinnatus (Ruppell, 1830) English Name: Coastal trevally Family: CARANGIDAE Local Name: Vabboa handhi Order: Perciformes Size: Max. 40 cm Specimen: MRS/P0l46/87 Distinctive Characters: First dorsal fin with 8 spines, second dorsal fin with I spine and 20-23 rays. Anal fin with 2 spines followed by 1 spine and 16-20 rays. Gill rakers on first gill arch including the rudiments, 2 1-25. Naked area of breast extends well beyond pelvic fins. Soft dorsal lobe filamentous in young, but shorter than the head length in adults. Colour: Silvery, somewhat darker above than below.