Porifera, Class Calcarea)
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Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Review of the Mineralogy of Calcifying Sponges
Dickinson College Dickinson Scholar Faculty and Staff Publications By Year Faculty and Staff Publications 12-2013 Not All Sponges Will Thrive in a High-CO2 Ocean: Review of the Mineralogy of Calcifying Sponges Abigail M. Smith Jade Berman Marcus M. Key, Jr. Dickinson College David J. Winter Follow this and additional works at: https://scholar.dickinson.edu/faculty_publications Part of the Paleontology Commons Recommended Citation Smith, Abigail M.; Berman, Jade; Key,, Marcus M. Jr.; and Winter, David J., "Not All Sponges Will Thrive in a High-CO2 Ocean: Review of the Mineralogy of Calcifying Sponges" (2013). Dickinson College Faculty Publications. Paper 338. https://scholar.dickinson.edu/faculty_publications/338 This article is brought to you for free and open access by Dickinson Scholar. It has been accepted for inclusion by an authorized administrator. For more information, please contact [email protected]. © 2013. Licensed under the Creative Commons http://creativecommons.org/licenses/by- nc-nd/4.0/ Elsevier Editorial System(tm) for Palaeogeography, Palaeoclimatology, Palaeoecology Manuscript Draft Manuscript Number: PALAEO7348R1 Title: Not all sponges will thrive in a high-CO2 ocean: Review of the mineralogy of calcifying sponges Article Type: Research Paper Keywords: sponges; Porifera; ocean acidification; calcite; aragonite; skeletal biomineralogy Corresponding Author: Dr. Abigail M Smith, PhD Corresponding Author's Institution: University of Otago First Author: Abigail M Smith, PhD Order of Authors: Abigail M Smith, PhD; Jade Berman, PhD; Marcus M Key Jr, PhD; David J Winter, PhD Abstract: Most marine sponges precipitate silicate skeletal elements, and it has been predicted that they would be among the few "winners" in an acidifying, high-CO2 ocean. -
The Inorganic Constituents of Marine Invertebrates
DEPARTMENT OF THE INTERIOR FRANKLIN K. LANE, Secretary UNITED STATES GEOLOGICAL SURVEY GEORGE OTIS SMITH, Director PROFESSIONAL PAPER 102 THE INORGANIC CONSTITUENTS OF MARINE INVERTEBRATES BY FRANK WIGGLESWORTH CLARKE AND WALTER CALHOUN WHEELER WASHINGTON GOVERNMENT PRINTING OFFICE 1917 DEPARTMENT OF THE INTERIOR FRANKLIN K. LANE, Secretary UNITED STATES GEOLOGICAL SURVEY GEORGE OTIS SMITQ, Director Professional Paper 102 THE INORGANIC CONSTITUENTS OF MARINE INVERTEBRATES BY FRANK WIGGLESWORTH CLARKE AND WALTER CALHOUN WHEELER WASHINGTON GOVERNMENT PRINTING OFFICE 1917 ADDITIONAL COPIES OF THIS PUBLICATION MAY BE PROCURED FROM THE SUPERINTENDENT OF DOCUMENTS GOVERNMENT PRINTING OFFICE WASHINGTON, D. C. AT 10 CENTS PER COPY CONTENTS. Introduction............................................................................................ 5 Foraminifera............................................................................................. 6 Sponges.................................................................................................. 7 Madreporian corals...................................................................................... 9 Alcyonarian corals....................................................................................... 12 Hydroids................................................................................................. 17 Annelids................................................................................................ 18 Echinoderms............................................................................................ -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Molecular Markers in Taxonomy of Freshwater Sponges and the Adriatic Calcareous Sponges
Josip Juraj Strossmayer University of Osijek University of Dubrovnik Ruđer Bošković Institute University Postgraduate Interdisciplinary Doctoral Study Molecular Biosciences Mirna Halasz Molecular markers in taxonomy of freshwater sponges and the Adriatic calcareous sponges PhD Dissertation Osijek, 2016 TEMELJNA DOKUMENTACIJSKA KARTICA Sveučilište Josipa Jurja Strossmayera u Osijeku Doktorska disertacija Sveučilište u Dubrovniku Institut Ruđer Bošković Poslijediplomski interdisciplinarni sveučilišni studij Molekularne bioznanosti Znanstveno područje: Prirodne znanosti Znanstveno polje: Biologija Molekularni markeri u taksonomiji slatkovodnih spužvi i jadranskih spužvi vapnenjača Mirna Halasz Disertacija je izrađena u: Laboratorij za molekularnu genetiku, Institut Ruđer Bošković Mentor/i: dr. sc. Helena Ćetković Kratki sažetak doktorske disertacije: Molekularna istraživanja doprinose brojnim izmjenama u taksonomiji pojedinih skupina životinja čiji se srodstveni odnosi temelje na morfološkim obilježjima. Mnoge slatkovodne spužve i spužve vapnenjače pogrešno su determinirane na temelju morfologije te su neophodne popratne molekularne analize. Analiza palindromskih elemenata u intergenskim regijama mitohondrijskih genoma slatkovodnih spužvi pokazuje da su porodice tih elemenata vjerojatno evolucijski povezane. Na osnovu molekularnih markera u kombinaciji s morfološkim obilježjima, u ovom je radu opisano 6 novih vrsta vapnenjača. Broj stranica: 103 Broj slika: 38 Broj tablica: 19 Broj literaturnih navoda: 133 Prilog: 19 stranica, 3 slike, 2 -
Sponge Biodiversity of the United Kingdom
Sponge Biodiversity of the United Kingdom A report from the Sponge Biodiversity of the United Kingdom project May 2008-May 2011 Claire Goodwin & Bernard Picton National Museums Northern Ireland Sponge Biodiversity of the United Kingdom Contents Page 1. Introduction 2 1.1 Project background 2 1.2 Project aims 2 1.3 Project outputs 2 2. Methods 3 2.1 Survey methodology 3 2.2 Survey locations 4 2.2.1 Firth of Lorn and Sound of Mull , Scotland 6 2.2.2 Pembrokeshire , Wales 6 2.2.3 Firth of Clyde , Scotland 6 2.2.4 Isles of Scilly , England 8 2.2.5 Sark, Channel Isles 8 2.2.6 Plymouth , England 8 2.3 Laboratory methodology 10 2.3.1 The identifi cation process 10 2.4 Data handling 11 3. Results 13 3.1 Notes on UK sponge communities 13 3.1.1 Scotland 13 3.1.2 Wales 13 3.1.3 Isles of Scilly 13 3.1.4 Sark 13 3.1.5 Sponge biogeography 15 3.2 Species of particular interest 15 4. Publications 34 4.1 Manuscripts in preparation 34 4.2 Published/accepted manuscripts 37 5. Publicity 37 5.1 Academic conference presentations 37 5.2 Public talks/events 38 5.3 Press coverage 38 6. Training Courses 39 7. Collaborations with other Organisations 42 8. Conclusions 44 8.1 Ulster Museum, National Museums Northern Ireland – a centre of excellence for sponge 44 taxonomy 8.2 Future work 44 8.2.1. Species requiring further work 45 9. Acknowledgements 46 10. -
Deep Phylogeny and Evolution of Sponges (Phylum Porifera)
CHAPTER ONE Deep Phylogeny and Evolution of Sponges (Phylum Porifera) G. Wo¨rheide*,†,‡,1, M. Dohrmann§, D. Erpenbeck*,†, C. Larroux*, M. Maldonado}, O. Voigt*, C. Borchiellinijj and D. V. Lavrov# Contents 1. Introduction 3 2. Higher-Level Non-bilaterian Relationships 4 2.1. The status of phylum Porifera: Monophyletic or paraphyletic? 7 2.2. Why is the phylogenetic status of sponges important for understanding early animal evolution? 13 3. Mitochondrial DNA in Sponge Phylogenetics 16 3.1. The mitochondrial genomes of sponges 16 3.2. Inferring sponge phylogeny from mtDNA 18 4. The Current Status of the Molecular Phylogeny of Demospongiae 18 4.1. Introduction to Demospongiae 18 4.2. Taxonomic overview 19 4.3. Molecular phylogenetics 22 4.4. Future work 32 5. The Current Status of the Molecular Phylogeny of Hexactinellida 33 5.1. Introduction to Hexactinellida 33 5.2. Taxonomic overview 33 5.3. Molecular phylogenetics 34 5.4. Future work 37 6. The Current Status of the Molecular Phylogeny of Homoscleromorpha 38 6.1. Introduction to Homoscleromorpha 38 * Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians- Universita¨tMu¨nchen, Mu¨nchen, Germany { GeoBio-Center, Ludwig-Maximilians-Universita¨tMu¨nchen, Mu¨nchen, Germany { Bayerische Staatssammlung fu¨r Pala¨ontologie und Geologie, Mu¨nchen, Germany } Department of Invertebrate Zoology, Smithsonian National Museum of Natural History, Washington, DC, USA } Department of Marine Ecology, Centro de Estudios Avanzados de Blanes (CEAB-CSIC), Blanes, Girona, Spain jj Institut Me´diterrane´en de Biodiversite´ et d’Ecologie marine et continentale, UMR 7263 IMBE, Station Marine d’Endoume, Chemin de la Batterie des Lions, Marseille, France # Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA 1Corresponding author: Email: [email protected] Advances in Marine Biology, Volume 61 # 2012 Elsevier Ltd ISSN 0065-2881, DOI: 10.1016/B978-0-12-387787-1.00007-6 All rights reserved. -
Index of Higher Taxa to Volumes 1 and 2
Index of Higher Taxa to Volumes 1 and 2 Page numbers in italic refer to Volume 2 [Taxa in brackets] indicate unavailable names, including nomina nuda. nomina oblita. lapsi and preoccupied names. Aaaba de Laubenfels, 1936 .. ... .... ... ........ ... .... ..... ... .... ... ... ... .... .... ... ...... 565 Actinocoelia Finks, 1960 ..................................................................... 389 [Aaata] de Laubenfels, 1930 ............................................................... 440 [Actinoites] Duan, 1984 ..................................................................... 1124 Aaptos Gray, 1867 ............................................................................... 228 Actinostromatidae Nicholson, 1886 ...................................................... 70 [Abila] Gray, 1867 ....................................................................... 440,473 Adocia Gray, 1867 ............................................................................... 863 Abilana Strand, 1928 ... .... ... .... ....... .... ... ......... ... .... ....... .... ... .... ...... ....... 473 Adociidae de Laubenfels, 1936 ........................................................... 852 Abyssocladia Levi, 1964 ......................................................................... 623 Adreissa Topsent, 1932 ........................................................................ 738 Acalle Gray, 1867 ................................................................................ 989 Adreus Gray, 1867 ........ ........ ........... -
Marine Fungi from the Sponge Grantia Compressa: Biodiversity, Chemodiversity, and Biotechnological Potential
marine drugs Article Marine Fungi from the Sponge Grantia compressa: Biodiversity, Chemodiversity, and Biotechnological Potential Elena Bovio 1,5, Laura Garzoli 1, Anna Poli 1, Anna Luganini 2 , Pietro Villa 3, Rosario Musumeci 3 , Grace P. McCormack 4, Clementina E. Cocuzza 3, Giorgio Gribaudo 2 , Mohamed Mehiri 5,* and Giovanna C. Varese 1,* 1 Mycotheca Universitatis Taurinensis, Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, 10125 Turin, Italy; [email protected] (E.B.); [email protected] (L.G.); [email protected] (A.P.) 2 Laboratory of Microbiology and Virology, Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, 10123 Turin, Italy; [email protected] (A.L.); [email protected] (G.G.) 3 Laboratory of Clinical Microbiology and Virology, Department of Medicine, University of Milano-Bicocca, via Cadore 48, 20900 Monza, Italy; [email protected] (P.V.); [email protected] (R.M.); [email protected] (C.E.C.) 4 Zoology, Ryan Institute, School of Natural Sciences, National University of Ireland Galway, University Road, Galway H91 TK33, Ireland; [email protected] 5 University Nice Côte d’Azur, CNRS, Nice Institute of Chemistry, UMR 7272, Marine Natural Products Team, 60103 Nice, France * Correspondence: [email protected] (M.M.); [email protected] (G.C.V.); Tel.: +33-492-076-154 (M.M.); +39-011-670-5964 (G.C.V.) Received: 24 December 2018; Accepted: 8 April 2019; Published: 11 April 2019 Abstract: The emergence of antibiotic resistance and viruses with high epidemic potential made unexplored marine environments an appealing target source for new metabolites. -
A Literature Review on the Poor Knights Islands Marine Reserve
A literature review on the Poor Knights Islands Marine Reserve Carina Sim-Smith Michelle Kelly 2009 Report prepared by the National Institute of Water & Atmospheric Research Ltd for: Department of Conservation Northland Conservancy PO Box 842 149-151 Bank Street Whangarei 0140 New Zealand Cover photo: Schooling pink maomao at Northern Arch Photo: Kent Ericksen Sim-Smith, Carina A literature review on the Poor Knights Islands Marine Reserve / Carina Sim-Smith, Michelle Kelly. Whangarei, N.Z: Dept. of Conservation, Northland Conservancy, 2009. 112 p. : col. ill., col. maps ; 30 cm. Print ISBN: 978-0-478-14686-8 Web ISBN: 978-0-478-14687-5 Report prepared by the National Institue of Water & Atmospheric Research Ltd for: Department of Conservation, Northland Conservancy. Includes bibliographical references (p. 67 -74). 1. Marine parks and reserves -- New Zealand -- Poor Knights Islands. 2. Poor Knights Islands Marine Reserve (N.Z.) -- Bibliography. I. Kelly, Michelle. II. National Institute of Water and Atmospheric Research (N.Z.) III. New Zealand. Dept. of Conservation. Northland Conservancy. IV. Title. C o n t e n t s Executive summary 1 Introduction 3 2. The physical environment 5 2.1 Seabed geology and bathymetry 5 2.2 Hydrology of the area 7 3. The biological marine environment 10 3.1 Intertidal zonation 10 3.2 Subtidal zonation 10 3.2.1 Subtidal habitats 10 3.2.2 Subtidal habitat mapping (by Jarrod Walker) 15 3.2.3 New habitat types 17 4. Marine flora 19 4.1 Intertidal macroalgae 19 4.2 Subtidal macroalgae 20 5. The Invertebrates 23 5.1 Protozoa 23 5.2 Zooplankton 23 5.3 Porifera 23 5.4 Cnidaria 24 5.5 Ectoprocta (Bryozoa) 25 5.6 Brachiopoda 26 5.7 Annelida 27 5.8. -
Marine Invertebrate Biodiversity from the Argentine Sea, South Western Atlantic
A peer-reviewed open-access journal ZooKeys 791: 47–70Marine (2018) invertebrate biodiversity from the Argentine Sea, South Western Atlantic 47 doi: 10.3897/zookeys.791.22587 DATA PAPER http://zookeys.pensoft.net Launched to accelerate biodiversity research Marine invertebrate biodiversity from the Argentine Sea, South Western Atlantic Gregorio Bigatti1,2,3, Javier Signorelli1 1 Laboratorio de Reproducción y Biología Integrativa de Invertebrados Marinos, (LARBIM) IBIOMAR-CO- NICET. Bvd. Brown 2915 (9120) Puerto Madryn, Chubut, Argentina 2 Universidad Nacional de la Pata- gonia San Juan Bosco, Boulevard Brown 3051, Puerto Madryn, Chubut, Argentina 3 Facultad de Ciencias Ambientales, Universidad Espíritu Santo, Ecuador Corresponding author: Javier Signorelli ([email protected]) Academic editor: P. Stoev | Received 13 December 2017 | Accepted 7 September 2018 | Published 22 October 2018 http://zoobank.org/ECB902DA-E542-413A-A403-6F797CF88366 Citation: Bigatti G, Signorelli J (2018) Marine invertebrate biodiversity from the Argentine Sea, South Western Atlantic. ZooKeys 791: 47–70. https://doi.org/10.3897/zookeys.791.22587 Abstract The list of marine invertebrate biodiversity living in the southern tip of South America is compiled. In particular, the living invertebrate organisms, reported in the literature for the Argentine Sea, were checked and summarized covering more than 8,000 km of coastline and marine platform. After an exhaustive lit- erature review, the available information of two centuries of scientific contributions is summarized. Thus, almost 3,100 valid species are currently recognized as living in the Argentine Sea. Part of this dataset was uploaded to the OBIS database, as a product of the Census of Marine Life-NaGISA project. -
Whangarei Port and Marsden Point) Baseline Survey for Non-Indigenous Marine Species (Research Project ZBS 2000/04)
Whangarei Harbour (Whangarei Port and Marsden Point) Baseline survey for non-indigenous marine species (Research Project ZBS 2000/04) Biosecurity New Zealand Technical Paper No: 2005/16 Prepared for BNZ Post-clearance Directorate by Graeme Inglis, Nick Gust, Isla Fitridge, Oliver Floerl, Chris Woods, Barbara Hayden, Graham Fenwick ISBN No: 0-478-07932-X ISSN No: 1176-838X March 2006 Disclaimer While every effort has been made to ensure the information in this publication is accurate, the Ministry of Agriculture and Forestry does not accept any responsibility or liability for error or fact omission, interpretation or opinion which may be present, nor for the consequences of any decisions based on this information. Any view or opinions expressed do not necessarily represent the official view of the Ministry of Agriculture and Forestry. The information in this report and any accompanying documentation is accurate to the best of the knowledge and belief of the National Institute of Water & Atmospheric Research Ltd (NIWA) acting on behalf of the Ministry of Agriculture and Forestry. While NIWA has exercised all reasonable skill and care in preparation of information in this report, neither NIWA nor the Ministry of Agriculture and Forestry accept any liability in contract, tort or otherwise for any loss, damage, injury, or expense, whether direct, indirect or consequential, arising out of the provision of information in this report. Requests for further copies should be directed to: Publication Adviser MAF Information Bureau P O Box 2526 WELLINGTON