Organic Functional Group Analysis
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Acidity, Basicity, and Pka 8 Connections
Acidity, basicity, and pKa 8 Connections Building on: Arriving at: Looking forward to: • Conjugation and molecular stability • Why some molecules are acidic and • Acid and base catalysis in carbonyl ch7 others basic reactions ch12 & ch14 • Curly arrows represent delocalization • Why some acids are strong and others • The role of catalysts in organic and mechanisms ch5 weak mechanisms ch13 • How orbitals overlap to form • Why some bases are strong and others • Making reactions selective using conjugated systems ch4 weak acids and bases ch24 • Estimating acidity and basicity using pH and pKa • Structure and equilibria in proton- transfer reactions • Which protons in more complex molecules are more acidic • Which lone pairs in more complex molecules are more basic • Quantitative acid/base ideas affecting reactions and solubility • Effects of quantitative acid/base ideas on medicine design Note from the authors to all readers This chapter contains physical data and mathematical material that some readers may find daunting. Organic chemistry students come from many different backgrounds since organic chemistry occu- pies a middle ground between the physical and the biological sciences. We hope that those from a more physical background will enjoy the material as it is. If you are one of those, you should work your way through the entire chapter. If you come from a more biological background, especially if you have done little maths at school, you may lose the essence of the chapter in a struggle to under- stand the equations. We have therefore picked out the more mathematical parts in boxes and you should abandon these parts if you find them too alien. -
Rules of the Alabama Department of Forensic Sciences Chapter 370-1-1 Chemical Test for Intoxication Table of Contents 370-1-1
RULES OF THE ALABAMA DEPARTMENT OF FORENSIC SCIENCES CHAPTER 370-1-1 CHEMICAL TEST FOR INTOXICATION TABLE OF CONTENTS 370-1-1-.01 Admissibility Rule for the Evidential Breath Alcohol Test Method 370-1-1-.03 Blood, Urine, and Other Bodily Substances 370-1-1-.04 Field Sobriety Screening Tests 370-1-1-.05 Field Sobriety Alcohol Screening Devices 370-1-1-.06 Field Sobriety Drug Screening Devices 370-1-1-.01 Admissibility Rule for the Evidential Breath Alcohol Test Method. (1) Purpose. This rule addresses the statutory elements required for the admissibility of evidence obtained from Breath Alcohol Testing Instruments. This rule contains the METHOD, as referred to by §32-5A-194 Code of Alabama, 1975 as amended, which insures and verifies that each individual Breath Alcohol Test is performed accurately and reliably. IN EVENT THAT ONE OF THESE REQUIREMENTS IS NOT FULFILLED, BREATH ALCOHOL TESTING EVIDENCE MAY STILL BE OFFERED THROUGH TRADITIONAL EVIDENTIARY PREDICATE as approved of in Ex parte Mayo, 652 So. 2d 201 (Ala. 1994). (2) Definitions and Abbreviations. (a) Draeger 7110 MKIII (i) Acceptable Breath Sample. For the purpose of this rule the subject must provide the Draeger Alcotest 7110 MKIII with a breath sample of sufficient volume and duration, as required by the software to be accepted for analysis. Software versions prior to and including version 3.24 require the subject to provide a minimum of 1.5 liters of breath, for a minimum of 4.5 seconds. Software versions 3.25 or later require the subject to provide a minimum of 1.3 liters of breath, for a minimum of 4.0 seconds. -
Recommended Methods for the Identification and Analysis Of
Vienna International Centre, P.O. Box 500, 1400 Vienna, Austria Tel: (+43-1) 26060-0, Fax: (+43-1) 26060-5866, www.unodc.org RECOMMENDED METHODS FOR THE IDENTIFICATION AND ANALYSIS OF AMPHETAMINE, METHAMPHETAMINE AND THEIR RING-SUBSTITUTED ANALOGUES IN SEIZED MATERIALS (revised and updated) MANUAL FOR USE BY NATIONAL DRUG TESTING LABORATORIES Laboratory and Scientific Section United Nations Office on Drugs and Crime Vienna RECOMMENDED METHODS FOR THE IDENTIFICATION AND ANALYSIS OF AMPHETAMINE, METHAMPHETAMINE AND THEIR RING-SUBSTITUTED ANALOGUES IN SEIZED MATERIALS (revised and updated) MANUAL FOR USE BY NATIONAL DRUG TESTING LABORATORIES UNITED NATIONS New York, 2006 Note Mention of company names and commercial products does not imply the endorse- ment of the United Nations. This publication has not been formally edited. ST/NAR/34 UNITED NATIONS PUBLICATION Sales No. E.06.XI.1 ISBN 92-1-148208-9 Acknowledgements UNODC’s Laboratory and Scientific Section wishes to express its thanks to the experts who participated in the Consultative Meeting on “The Review of Methods for the Identification and Analysis of Amphetamine-type Stimulants (ATS) and Their Ring-substituted Analogues in Seized Material” for their contribution to the contents of this manual. Ms. Rosa Alis Rodríguez, Laboratorio de Drogas y Sanidad de Baleares, Palma de Mallorca, Spain Dr. Hans Bergkvist, SKL—National Laboratory of Forensic Science, Linköping, Sweden Ms. Warank Boonchuay, Division of Narcotics Analysis, Department of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand Dr. Rainer Dahlenburg, Bundeskriminalamt/KT34, Wiesbaden, Germany Mr. Adrian V. Kemmenoe, The Forensic Science Service, Birmingham Laboratory, Birmingham, United Kingdom Dr. Tohru Kishi, National Research Institute of Police Science, Chiba, Japan Dr. -
Comparative Strengths of Four Organic Bases in Benzene1 Marion Maclean Davis and Hannah B
Journal of Research of the National Bureau of Standards Vol. 48, No. 5, May 1952 Research Paper 2326 Comparative Strengths of Four Organic Bases in Benzene1 Marion Maclean Davis and Hannah B. Hetzer Spectropho to metric studies have shown that the reaction of the base 1,3-di-o-tolylguani- dine with the acidic indicator dye bromophthalein magenta E (tetrabromophenolphthalein ethyl ester) in benzene at 25° C, like the reactions of 1,3-diphenylguanidine and 1,2,3-tri- phenylguanidine with the same indicator, can be represented by the following two equations: B + HA ^ BH+.A- (colorless base) (yellow acid) (magenta salt) BH+.A- + B^(BHB)+A- (blue salt) For ditolylguanidine, the equilibrium constants K\ and K2 for the first and second reactions, respectively, are estimated to be 1.1 X106 and 6.4. These values are compared with values for Ki and K2 previously found for di- and triphenylguanidine and the value of Ki found for triethylamine. The values for K\, which measure the relative tendencies of the bases to form salts with the indicator acid in benzene, would be expected to parallel the ionic dissociation constants of the bases in water. However, the parallelism is not good. Diphenylguanidine and ditolylguariidine, which are presumed to be weaker bases in water than triethylamine, are much more reactive in benzene. The results demonstrate how misleading the aqueous dissociation constants may be as a gage of the relative reactivities of bases in a nonaqueous solvent such as benzene. Steric and solvation effects are discussed. 1. Introduction i optical instruments then available, it was possible to make only roughly quantitative comparisons of Hantzsch and his coworkers were the first to J acidic strengths. -
Chapter 14 – Acid-Base Equilibria Most Solutions That Occur in Nature Are Slightly Acidic. One Reason for This Is That When C
Chapter 14 – Acid-Base Equilibria Most solutions that occur in nature are slightly acidic. One reason for this is that when carbon dioxide dissolves in water, it forms carbonic acid, H2CO3. Basic solutions that exist in nature typically have limited direct exposure to air. For example, your blood is slightly basic and, under ideal circumstances, is not open to the air. Likewise, peach pits contain strychnine, an organic base, which is not protonated because of the shell that seals out the atmosphere. Figure 14.2 (p. 769) lists the pHs of some common substances. Note that only seawater occurs openly in nature with a pH over 7. We’ll see why before this chapter is through. 14.1 Brønsted-Lowry Acids and Bases Earlier, in Chapter 2, you were given quick working definitions of acids and bases. We will now expand on those definitions, but begin with a short reminder of how acids and bases were originally identified and characterized. Acidic solutions generally have a sour taste (e.g. grapefruit and lemon juices) and dissolve certain metals. Bases have a bitter taste and feel slippery. The slippery feeling comes from the base breaking down oils and fatty acids in your hands. The old lye soap used a century ago cleaned by removing the top layer of skin and anything that was attached to it. Modern soaps use a different type of active chemical that doesn’t react with your skin. The first good definition of acids and bases was proposed by Arrhenius (the same person who proposed activation energy). He proposed that acids were substances that produces H+ ions in water and bases were substances that produces OH- ions in water. -
510(K) SUBSTANTIAL EQUIVALENCE DETERMINATION DECISION SUMMARY ASSAY and INSTRUMENT COMBINATION TEMPLATE
510(k) SUBSTANTIAL EQUIVALENCE DETERMINATION DECISION SUMMARY ASSAY AND INSTRUMENT COMBINATION TEMPLATE A. 510(k) Number: k180356 B. Purpose for Submission: New Device C. Measurand: Glucose, protein, leukocyte, nitrite and ketones in urine D. Type of Test: Qualitative and semi-quantitative urinalysis E. Applicant: Scanadu, Inc. F. Proprietary and Established Names: inui In-Home Urine Analysis Test System G. Regulatory Information: Name Regulation Product Device code class Urinary glucose (non-quantitative) test 21 CFR 862.1340 JIL II system Urinary protein or albumin (non- 21 CFR 862.1645 JIR I quantitative) test system Leukocyte peroxidase test 21 CFR 864.7675 LJX I Nitrite (non-quantitative) test system 21 CFR 862.1510 JMT I Ketones (non-quantitative) test system 21 CFR 862.1435 JIN I 2. Panel: Chemistry (75), Hematology (81) 1 H. Intended Use: 1. Intended use(s): See indications for use statement below. 2. Indication(s) for use: The inui In-Home Urine Analysis Test System consists of the inui In-Home Urine Analysis Device and the inui Urine Analysis Mobile Application. The inui In-Home Urine Analysis Test System is intended for detecting the following parameters in urine: protein, glucose, leukocytes, nitrites, and ketones. The test results provide information regarding the status of urinary tract infections (UTI), proteinuria, glucosuria, and ketonuria. These results can be used as an aid for monitoring kidney functions, metabolic disorders (e.g. diabetes mellitus), and can be used in the screening for urinary tract infections (UTI). The inui In-Home Urine Analysis Device is intended for use as a Prescription Home use device. -
Supplementary Information Methods for Converting Cysteine to Dehydroalanine on Peptides and Proteins
Electronic Supplementary Material (ESI) for Chemical Science This journal is © The Royal Society of Chemistry 2011 Supplementary Information Methods for converting cysteine to dehydroalanine on peptides and proteins Justin M. Chalker,a Smita B. Gunnoo,a Omar Boutureira,a Stefanie C. Gerstberger,a Marta Fernández-González,a Gonçalo J. L. Bernardes,a Laura Griffin,b Hanna Hailu,b Christopher J. Schofield,a and Benjamin G. Davis*a a Chemistry Research Laboratory, Department of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK b UCB Celltech, 208 Bath Road, Slough, Berkshire, SL1 3WE, United Kingdom [email protected] S1 Electronic Supplementary Material (ESI) for Chemical Science This journal is © The Royal Society of Chemistry 2011 Table of Contents General considerations S4 Synthesis of AcCysOMe S6 Synthesis of methyl ester of Ellman’s reagent (4) S6 Synthesis of disulfide 3 S7 Reaction of 3 and HMPT S8 BocAlaCysOMe (7) synthesis S9 BocAlaDhaOMe (8) using reduction-elimination S11 Reaction of disulfide 3 with DBU S13 Reaction of AcCysOMe and Mukaiyama’s reagent S14 MSH synthesis S15 BocSerOMe synthesis S16 BocThrOMe synthesis S16 BocAsnOMe synthesis S17 BocGlnOMe synthesis S18 BocTyrOMe synthesis S18 BocTrpOMe synthesis S20 BocMetOMe synthesis S20 BocHisOMe synthesis S21 BocLysOMe synthesis S22 HCl•PheOMe synthesis S25 MSH reaction with BocSerOMe S26 MSH reaction with BocThrOMe S26 MSH reaction with BocAsnOMe S26 MSH reaction with BocGlnOMe S27 MSH reaction with BocTyrOMe S27 MSH reaction with BocTrpOMe S27 MSH -
Kinetic Direct Peptide Reactivity Assay (Kdpra): Validation Study Report
Kinetic DPRA Validation Study Report 6 March 2020 Kinetic Direct Peptide Reactivity Assay (kDPRA): Validation Study Report Lead Laboratories and Study Management: BASF SE Britta Wareing Phone: +49 621 60-58107, Email: [email protected] Dr. Susanne Kolle Phone: +49 621 60-56731, Email: [email protected], Experimental Toxicology and Ecology Postal Address: BASF SE, Carl-Bosch-Strasse 38, 67056 Ludwigshafen am Rhein, Germany Responsibilities: Protocol authorship Coordination between laboratories Organisation of test chemical procurement Givaudan Schweiz AG Dr. Andreas Natsch Phone: +41 44 824 21 05, Email: [email protected]; Tina Haupt Phone: +41 44 824 25 15, Email: [email protected] Postal Address: Department of in vitro molecular screening, Givaudan Schweiz AG, Kemptpark 50, CH-8310 Kemptthal, Switzerland Responsibilities: Test chemical selection Optimisation of rate constant calculation in evaluation sheet and cut-off refinement Biostatistics Naïve Test Laboratories: Institute for In Vitro Sciences (IIVS), 30 West Watkins Mill Road Suite 100, Gaithersburg, MD 20878, USA: Contact persons: Erin H Hill ([email protected]), Hans Raabe ([email protected]), Rishil Kathawala ([email protected]) Procter & Gamble, Mason Business Center, DS3-812, 8700 Mason-Montgomery Road, Mason, OH, 45040, USA: Contact persons: Cindy Ryan ([email protected]) and Petra Kern ([email protected]) Charles River Laboratories Den Bosch BV, Hambakenwetering 7, 5231 DD ‘s-Hertogenbosch, The Netherlands: Contact persons: Walter Westerink ([email protected]), -
Color Test Reagents/Kits for Preliminary Identification of Drugs of Abuse
U.S. Department of Justice Office of Justice Programs National Institute of Justice National Institute of Justice Law Enforcement and Corrections Standards and Testing Program Color Test Reagents/Kits for Preliminary Identification of Drugs of Abuse NIJ Standard–0604.01 ABOUT THE LAW ENFORCEMENT AND CORRECTIONS STANDARDS AND TESTING PROGRAM The Law Enforcement and Corrections Standards and Testing Program is sponsored by the Office of Science and Technology of the National Institute of Justice (NIJ), U.S. Department of Justice. The program responds to the mandate of the Justice System Improvement Act of 1979, which directed NIJ to encourage research and development to improve the criminal justice system and to disseminate the results to Federal, State, and local agencies. The Law Enforcement and Corrections Standards and Testing Program is an applied research effort that determines the technological needs of justice system agencies, sets minimum performance standards for specific devices, tests commercially available equipment against those standards, and disseminates the standards and the test results to criminal justice agencies nationally and internationally. The program operates through: The Law Enforcement and Corrections Technology Advisory Council (LECTAC), consisting of nationally recognized criminal justice practitioners from Federal, State, and local agencies, which assesses technological needs and sets priorities for research programs and items to be evaluated and tested. The Office of Law Enforcement Standards (OLES) at the National Institute of Standards and Technology, which develops voluntary national performance standards for compliance testing to ensure that individual items of equipment are suitable for use by criminal justice agencies. The standards are based upon laboratory testing and evaluation of representative samples of each item of equipment to determine the key attributes, develop test methods, and establish minimum performance requirements for each essential attribute. -
Types of Titrations 1- Acid–Base Titration
Types of titrations There are many types of titrations with different procedures and goals. The most common types of qualitative titration are acid–base titrations and redox titrations. 1- Acid–base titration Neutralization titrations are widely used to determine the amounts of acids and bases and to monitor the progress of reactions that produce or consume hydrogen ions. In addition, we investigate titration curves that are plots of pH vs. volume of titrant, and present several examples of pH calculations. Acid–base titrations depend on the neutralization between an acid and a base when mixed in solution. In addition to the sample, an appropriate pH indicator is added to the titration chamber, reflecting the pH range of the equivalence point. The acid–base indicator indicates the endpoint of the titration by changing color. The endpoint and the equivalence point are not exactly the same because the equivalence point is determined by the stoichiometry of the reaction while the endpoint is just the color change from the indicator. Thus, a careful selection of the indicator will reduce the indicator error. For example, if the equivalence point is at a pH of 8.4, then the Phenolphthalein indicator would be used instead of Alizarin Yellow because phenolphthalein would reduce the indicator error. Common indicators, their colors, and the pH range in which they change color are given in the table above.[23] When more precise results are required, or when the reagents are a weak acid and a weak base, a pH meter or a conductance meter are used. For very strong bases, such as organolithium reagent, metal amides, and hydrides, water is generally not a suitable solvent and indicators whose pKa are in the range of aqueous pH changes are of little use. -
Shifted Equilibria of Organic Acids and Bases in the Aqueous Surface Region† Cite This: Phys
PCCP View Article Online PAPER View Journal | View Issue Shifted equilibria of organic acids and bases in the aqueous surface region† Cite this: Phys. Chem. Chem. Phys., 2018, 20,23281 ab b a Josephina Werner, * Ingmar Persson, Olle Bjo¨rneholm, Delphine Kawecki,‡a Clara-Magdalena Saak, a Marie-Madeleine Walz, §a Victor Ekholm, a Isaak Unger,a Corina Valtl,a Carl Caleman, ac Gunnar O¨ hrwall d and Nønne L. Prisle ef Acid–base equilibria of carboxylic acids and alkyl amines in the aqueous surface region were studied using surface-sensitive X-ray photoelectron spectroscopy and molecular dynamics simulations. Solutions of these organic compounds were examined as a function of pH, concentration and chain length to investigate the distribution of acid and base form in the surface region as compared to the aqueous bulk. Results from these experiments show that the neutral forms of the studied acid–base pairs are strongly enriched in the aqueous surface region. Moreover, we show that for species with at Creative Commons Attribution-NonCommercial 3.0 Unported Licence. least four carbon atoms in their alkyl-chain, their charged forms are also found to be abundant in the surface region. Using a combination of XPS and MD results, a model is proposed that effectively describes the surface composition. Resulting absolute surface concentration estimations show clearly that the total organic mole fractions in the surface region change drastically as a function of solution Received 23rd March 2018, pH. The origin of the observed surface phenomena, hydronium/hydroxide concentrations in the Accepted 30th August 2018 aqueous surface region and why standard chemical equations, used to describe equilibria in dilute bulk DOI: 10.1039/c8cp01898g solution are not valid in the aqueous surface region, are discussed in detail. -
Chemical Storage Guidelines
Chemical Storage Guidelines Use these guidelines to determine appropriate storage locations for the chemicals in your area. The tables below show examples of chemicals within each group, but are NOT all inclusive. For more information about storing chemicals, refer to your Safety Data Sheets, the Laboratory Safety Manual, or contact an EH&S Laboratory Safety Specialist. Acids (pH < 7.0) Mineral acid Organic acid Oxidizing acid Hydrochloric acid Acetic acid Nitric acid Phosphoric acid Formic acid Perchloric acid Storage: Store in a corrosives cabinet, if available, or in compatible secondary containment. Incompatibility information: Acids should be segregated from bases and flammables. Oxidizing acids are incompatible with most chemicals, especially organics. Specific combinations to avoid: • Acetic acid with chromic acid, nitric acid, hydroxyl compounds, ethylene glycol, perchloric acid, peroxides, or permanganates • Chromic acid with acetic acid, naphthalene, camphor, glycerin, turpentine, alcohol, (especially ethanol) or flammable liquids • Nitric acid with acetic acid, aniline, chromic acid, hydrocyanic acid, hydrogen sulfide, flammable liquids, flammable gases, copper, brass, or any heavy metals • Perchloric acid with acetic acid, acetic anhydride, bismuth and its alloys, alcohol, paper, wood, ether, oils or grease Bases (pH > 7.0) Inorganic base Organic base Potassium hydroxide Diethylamine Sodium hydroxide Piperidine Storage: Store in a corrosives cabinet, if available, or in compatible secondary containment. Incompatibility information: Bases should be segregated from acids, flammables, and reactives. Environmental Health and Safety | 2408 Wanda Daley Drive | Ames, IA 50011-3602 | Ph: (515) 294-5359 | www.ehs.iastate.edu Reviewed 2018 1 Flammables Flammable liquid Flammable solid Acetone Napthalene Ether Paraformaldehyde Storage: Flammable liquids totaling more than 10 gallons must be stored in a flammable cabinet.