Management of Celery Mosaic Virus
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Changes to Virus Taxonomy 2004
Arch Virol (2005) 150: 189–198 DOI 10.1007/s00705-004-0429-1 Changes to virus taxonomy 2004 M. A. Mayo (ICTV Secretary) Scottish Crop Research Institute, Invergowrie, Dundee, U.K. Received July 30, 2004; accepted September 25, 2004 Published online November 10, 2004 c Springer-Verlag 2004 This note presents a compilation of recent changes to virus taxonomy decided by voting by the ICTV membership following recommendations from the ICTV Executive Committee. The changes are presented in the Table as decisions promoted by the Subcommittees of the EC and are grouped according to the major hosts of the viruses involved. These new taxa will be presented in more detail in the 8th ICTV Report scheduled to be published near the end of 2004 (Fauquet et al., 2004). Fauquet, C.M., Mayo, M.A., Maniloff, J., Desselberger, U., and Ball, L.A. (eds) (2004). Virus Taxonomy, VIIIth Report of the ICTV. Elsevier/Academic Press, London, pp. 1258. Recent changes to virus taxonomy Viruses of vertebrates Family Arenaviridae • Designate Cupixi virus as a species in the genus Arenavirus • Designate Bear Canyon virus as a species in the genus Arenavirus • Designate Allpahuayo virus as a species in the genus Arenavirus Family Birnaviridae • Assign Blotched snakehead virus as an unassigned species in family Birnaviridae Family Circoviridae • Create a new genus (Anellovirus) with Torque teno virus as type species Family Coronaviridae • Recognize a new species Severe acute respiratory syndrome coronavirus in the genus Coro- navirus, family Coronaviridae, order Nidovirales -
Induction of Plant Resistance Against Tobacco Mosaic Virus Using the Biocontrol Agent Streptomyces Cellulosae Isolate Actino 48
agronomy Article Induction of Plant Resistance against Tobacco Mosaic Virus Using the Biocontrol Agent Streptomyces cellulosae Isolate Actino 48 Gaber Attia Abo-Zaid 1 , Saleh Mohamed Matar 1,2 and Ahmed Abdelkhalek 3,* 1 Bioprocess Development Department, Genetic Engineering and Biotechnology Research Institute (GEBRI), City of Scientific Research and Technological Applications (SRTA-City), New Borg El-Arab City, Alexandria 21934, Egypt; [email protected] (G.A.A.-Z.); [email protected] (S.M.M.) 2 Chemical Engineering Department, Faculty of Engineering, Jazan University, Jazan 45142, Saudi Arabia 3 Plant Protection and Biomolecular Diagnosis Department, ALCRI, City of Scientific Research and Technological Applications, New Borg El Arab city, Alexandria 21934, Egypt * Correspondence: [email protected] Received: 8 September 2020; Accepted: 19 October 2020; Published: 22 October 2020 Abstract: Viral plant diseases represent a serious problem in agricultural production, causing large shortages in the production of food crops. Eco-friendly approaches are used in controlling viral plant infections, such as biocontrol agents. In the current study, Streptomyces cellulosae isolate Actino 48 is tested as a biocontrol agent for the management of tobacco mosaic virus (TMV) and inducing tomato plant systemic resistance under greenhouse conditions. Foliar application of a cell pellet suspension of Actino 48 (2 107 cfu. mL 1) is performed at 48 h before inoculation with TMV. Peroxidase activity, × − chitinase activity, protein content, and the total phenolic compounds are measured in tomato leaves at 21 dpi. On the other hand, the TMV accumulation level and the transcriptional changes of five tomato defense-related genes (PAL, PR-1, CHS, PR-3, and PR-2) are studied. -
Comparative Analysis, Distribution, and Characterization of Microsatellites in Orf Virus Genome
www.nature.com/scientificreports OPEN Comparative analysis, distribution, and characterization of microsatellites in Orf virus genome Basanta Pravas Sahu1, Prativa Majee 1, Ravi Raj Singh1, Anjan Sahoo2 & Debasis Nayak 1* Genome-wide in-silico identifcation of microsatellites or simple sequence repeats (SSRs) in the Orf virus (ORFV), the causative agent of contagious ecthyma has been carried out to investigate the type, distribution and its potential role in the genome evolution. We have investigated eleven ORFV strains, which resulted in the presence of 1,036–1,181 microsatellites per strain. The further screening revealed the presence of 83–107 compound SSRs (cSSRs) per genome. Our analysis indicates the dinucleotide (76.9%) repeats to be the most abundant, followed by trinucleotide (17.7%), mononucleotide (4.9%), tetranucleotide (0.4%) and hexanucleotide (0.2%) repeats. The Relative Abundance (RA) and Relative Density (RD) of these SSRs varied between 7.6–8.4 and 53.0–59.5 bp/ kb, respectively. While in the case of cSSRs, the RA and RD ranged from 0.6–0.8 and 12.1–17.0 bp/kb, respectively. Regression analysis of all parameters like the incident of SSRs, RA, and RD signifcantly correlated with the GC content. But in a case of genome size, except incident SSRs, all other parameters were non-signifcantly correlated. Nearly all cSSRs were composed of two microsatellites, which showed no biasedness to a particular motif. Motif duplication pattern, such as, (C)-x-(C), (TG)- x-(TG), (AT)-x-(AT), (TC)- x-(TC) and self-complementary motifs, such as (GC)-x-(CG), (TC)-x-(AG), (GT)-x-(CA) and (TC)-x-(AG) were observed in the cSSRs. -
Cucumber Mosaic Kymberly R
XHT1255 Provided to you by: Cucumber Mosaic Kymberly R. Draeger*, UW-Madison Plant Pathology What is cucumber mosaic? Cucumber mosaic is a viral disease of worldwide distribution that affects over 1200 plant species. Hosts include a wide range of fruits, vegetables, herbaceous and woody ornamentals, and weeds. The disease has perhaps its biggest impact in vegetable production where it can cause significant losses in yield and vegetable quality. arden Facts Cumber mosaic on pepper (left) showing yellowing and ring spots, and on broad bean (right) showing mosaic and puckering of leaf tissue. (Photos courtesy of Russ Groves) What does cucumber mosaic look like? Symptoms of cucumber mosaic can vary widely depending on host species, host variety, and time of infection. Typical symptoms include stunting of entire plants, mosaic or mottling (i.e., blotchy white, yellow, and light green areas) and ring spots (i.e., ring-like areas of discolored tissue) on leaves and fruits, and a variety of growth distortions such as cupping, puckering and strapping (i.e., elongation and thinning) of leaves as well as warts on fruits. In extreme situations, parts of an affected plant or even an entire plant may die from the disease. Where does cucumber mosaic come from? Cucumber mosaic is caused by Cucumber mosaic virus (CMV) which can overwinter in susceptible biennial or perennial weeds, as well as in perennial agricultural crops (e.g., alfalfa) and perennial herbaceous and woody ornamentals. Seeds and even pollen from certain host plants can carry the virus, and thus the virus can be spread via these plant parts. -
The Occurrence of the Viruses in Narcissus L
Journal of Horticultural Research 2016, vol. 24(2): 19-24 DOI: 10.1515/johr-2016-0016 _______________________________________________________________________________________________________ THE FREQUENCY OF VIRAL INFECTIONS ON TWO NARCISSUS PLANTATIONS IN CENTRAL POLAND Short communication Dariusz SOCHACKI1*, Ewa CHOJNOWSKA2 1Warsaw University of Life Sciences – SGGW, Nowoursynowska 166, 02-767 Warsaw, Poland 2Research Institute of Horticulture, Konstytucji 3 Maja 1/3, 96-100 Skierniewice Received: November 2016; Accepted: December 2016 ABSTRACT Viral diseases in narcissus can drastically affect yields and quality of narcissus bulbs and flowers, leading even to a total crop loss. To test the frequency of viral infections in production fields in Central Poland, samples were collected over three years from two cultivars and two plantations, and tested for the presence of Arabis mosaic (ArMV), Cucumber mosaic (CMV), Narcissus latent (NLV), Narcissus mosaic (NMV) and the potyvirus group using the Enzyme Linked ImmunoSorbent Assay. Potyviruses, NLV and NMV were detected in almost all leaf samples in both cultivars, in all three years of testing. Other viruses were detected in a limited number of samples. In most cases mixed infections were present. Tests on bulbs have shown the presence of potyviruses and NMV, with the higher number of positives in cultivar ‘Carlton’. In addition, for most viruses an increase in their detectability was observed on both plantations in subse- quent seasons. Key words: ELISA, flower bulbs, negative selection, viral disease INTRODUCTION (NMV). Many of the most important viruses infect- ing narcissus belongs to the potyvirus group. Viral diseases can drastically affect yield as Asjes (1996) reported that degeneration of nar- well as quality of narcissus bulbs and flowers, some- cissus plants caused by viruses may decrease bulb times resulting in a total crop loss. -
The P1N-PISPO Trans-Frame Gene of Sweet Potato Feathery Mottle
crossmark The P1N-PISPO trans-Frame Gene of Sweet Potato Feathery Mottle Potyvirus Is Produced during Virus Infection and Functions as an RNA Silencing Suppressor Downloaded from Ares Mingot,a Adrián Valli,b Bernardo Rodamilans,c David San León,c David C. Baulcombe,b Juan Antonio García,c Juan José López-Moyaa Center for Research in Agricultural Genomics, CSIC-IRTA-UAB-UB, Cerdanyola del Vallès, Barcelona, Spaina; Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdomb; Centro Nacional de Biotecnología CNB, CSIC, Madrid, Spainc ABSTRACT The positive-sense RNA genome of Sweet potato feathery mottle virus (SPFMV) (genus Potyvirus, family Potyviridae) contains a /large open reading frame (ORF) of 3,494 codons translatable as a polyprotein and two embedded shorter ORFs in the ؊1 frame: http://jvi.asm.org PISPO, of 230 codons, and PIPO, of 66 codons, located in the P1 and P3 regions, respectively. PISPO is specific to some sweet potato-infecting potyviruses, while PIPO is present in all potyvirids. In SPFMV these two extra ORFs are preceded by conserved G2A6 motifs. We have shown recently that a polymerase slippage mechanism at these sites could produce transcripts bringing these ORFs in frame with the upstream polyprotein, thus leading to P1N-PISPO and P3N-PIPO products (B. Rodamilans, A. Valli, A. Mingot, D. San Leon, D. B. Baulcombe, J. J. Lopez-Moya, and J.A. Garcia, J Virol 89:6965–6967, 2015, doi:10.1128/JVI.00 337-15). Here, we demonstrate by liquid chromatography coupled to mass spectrometry that both P1 and P1N-PISPO are produced during viral infection and coexist in SPFMV-infected Ipomoea batatas plants. -
Virus World As an Evolutionary Network of Viruses and Capsidless Selfish Elements
Virus World as an Evolutionary Network of Viruses and Capsidless Selfish Elements Koonin, E. V., & Dolja, V. V. (2014). Virus World as an Evolutionary Network of Viruses and Capsidless Selfish Elements. Microbiology and Molecular Biology Reviews, 78(2), 278-303. doi:10.1128/MMBR.00049-13 10.1128/MMBR.00049-13 American Society for Microbiology Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Virus World as an Evolutionary Network of Viruses and Capsidless Selfish Elements Eugene V. Koonin,a Valerian V. Doljab National Center for Biotechnology Information, National Library of Medicine, Bethesda, Maryland, USAa; Department of Botany and Plant Pathology and Center for Genome Research and Biocomputing, Oregon State University, Corvallis, Oregon, USAb Downloaded from SUMMARY ..................................................................................................................................................278 INTRODUCTION ............................................................................................................................................278 PREVALENCE OF REPLICATION SYSTEM COMPONENTS COMPARED TO CAPSID PROTEINS AMONG VIRUS HALLMARK GENES.......................279 CLASSIFICATION OF VIRUSES BY REPLICATION-EXPRESSION STRATEGY: TYPICAL VIRUSES AND CAPSIDLESS FORMS ................................279 EVOLUTIONARY RELATIONSHIPS BETWEEN VIRUSES AND CAPSIDLESS VIRUS-LIKE GENETIC ELEMENTS ..............................................280 Capsidless Derivatives of Positive-Strand RNA Viruses....................................................................................................280 -
Australian Olympians 2014
AUSTRALIAN OLYMPIANS 2014 - THIS ISSUE - SOCHI 2014 / NANJING 2014 / ROAD TO RIO CHAMPIONS OF THE WORLD / ATHLETE TRANSITION / REUNIONS NOW Australian Olympians — 2014 FINDING SOMETHING THAT MORE Australian Olympians — 2014 16 HALL OF FAME Australian Olympians were celebrated and recognised at the Annual Sport Australia Hall of Fame awards. 10 JOHN COATES AC CHAMPIONS OF THE WORLD President, Australian Olympic Committee Australian Olympians triumph taking on the world’s best. Vice President, International Olympic Committee 32 The greatest honour in sport is to be called an Australian Olympian. This year we have seen a number of reunions take place celebrating significant milestones of ROAD TO RIO Olympic Games. Whether you are still competing or retired, I encourage you to keep sharing the Olympic spirit amongst your Team mates and in your communities. In 2016, Rio de Janeiro will host the XXXI Olympic Games and they I was most pleased to see the competitive drive and camaraderie amongst our 60 promise to be spectacular. Olympians in Sochi, where for the first time in Australia’s Olympic history we saw 43 more women (31) than men (29) competing. Congratulations to all Olympians for your collective effort and outstanding results. INSIDE Contributing to a At the Youth Olympic Games in Nanjing, China, the spirit exhibited by the 89 Youth better world Olympians in our Australian Team epitomised what the Olympic Movement strives for. 23 through sport In November 2014 the AOC Executive resolved to recognise our Australian Indigenous heritage in the AOC’s Constitution. I was delighted to announce this with Cathy SOCHI 2014 Freeman and I look forward to the AOC offering practical support to Indigenous Australians through sport in the years to come. -
Cucumber Mosaic Virus in Hawai‘I
Plant Disease August 2014 PD-101 Cucumber Mosaic Virus in Hawai‘i Mark Dragich, Michael Melzer, and Scot Nelson Department of Plant Protection and Environmental Protection Sciences ucumber mosaic virus (CMV) is Pathogen one of the most widespread and The pathogen causing cucumber troublesomeC viruses infecting culti- mosaic disease(s) is Cucumber mo- vated plants worldwide. The diseases saic cucumovirus (Roossinck 2002), caused by CMV present a variety of although it is also known by other global management problems in a names, including Cucumber virus 1, wide range of agricultural and ecologi- Cucumis virus 1, Marmor cucumeris, cal settings. The elevated magnitude Spinach blight virus, and Tomato fern of risk posed by CMV is due to its leaf virus (Ferreira et al. 1992). This broad host range and high number of plant pathogen is a single-stranded arthropod vectors. RNA virus having three single strands Plant diseases caused by CMV of RNA per virus particle (Ferreira occur globally. Doolittle and Jagger et al. 1992). CMV belongs to the first reported the characteristic mosaic genus Cucumovirus of the virus symptoms caused by the virus in 1916 family Bromoviridae. There are nu- on cucumber. The pandemic distribu- merous strains of CMV that vary in tion of cucumber mosaic, coupled with their pathogenicity and virulence, as the fact that it typically causes 10–20% well as others having different RNA yield loss where it occurs (although it Mosaic symptoms associated with satellite virus particles that modify can cause 100% losses in cucurbits) Cucumber mosaic virus on a nau- pathogen virulence and plant disease makes it an agricultural disease of paka leaf. -
Aphid Transmission of Potyvirus: the Largest Plant-Infecting RNA Virus Genus
Supplementary Aphid Transmission of Potyvirus: The Largest Plant-Infecting RNA Virus Genus Kiran R. Gadhave 1,2,*,†, Saurabh Gautam 3,†, David A. Rasmussen 2 and Rajagopalbabu Srinivasan 3 1 Department of Plant Pathology and Microbiology, University of California, Riverside, CA 92521, USA 2 Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC 27606, USA; [email protected] 3 Department of Entomology, University of Georgia, 1109 Experiment Street, Griffin, GA 30223, USA; [email protected] * Correspondence: [email protected]. † Authors contributed equally. Received: 13 May 2020; Accepted: 15 July 2020; Published: date Abstract: Potyviruses are the largest group of plant infecting RNA viruses that cause significant losses in a wide range of crops across the globe. The majority of viruses in the genus Potyvirus are transmitted by aphids in a non-persistent, non-circulative manner and have been extensively studied vis-à-vis their structure, taxonomy, evolution, diagnosis, transmission and molecular interactions with hosts. This comprehensive review exclusively discusses potyviruses and their transmission by aphid vectors, specifically in the light of several virus, aphid and plant factors, and how their interplay influences potyviral binding in aphids, aphid behavior and fitness, host plant biochemistry, virus epidemics, and transmission bottlenecks. We present the heatmap of the global distribution of potyvirus species, variation in the potyviral coat protein gene, and top aphid vectors of potyviruses. Lastly, we examine how the fundamental understanding of these multi-partite interactions through multi-omics approaches is already contributing to, and can have future implications for, devising effective and sustainable management strategies against aphid- transmitted potyviruses to global agriculture. -
Karl Hammer – Ein Leben Als Kulturpflanzenforscher Festschrift Zur Emeritierung
Karl Hammer – ein Leben als Kulturpflanzenforscher Festschrift zur Emeritierung Geleitwort des Vereins zur Erhaltung der Nutzpflanzenvielfalt..................................... 3 Dem Kulturpflanzenforscher Prof. Dr. Karl Hammer zur Emeritierung ..................... 5 10 Publikationen aus 4 Jahrzehnten .................................................................................. 9 Über domestizierte Kakteen - 3 (1978) ........................................................................... 10 Das Domestikationssyndrom (1984) ............................................................................... 13 Bedeutung von Kulturpflanze-Unkraut-Komplexen für die Evolution der Kulturpflanzen (1991) .............................................................................. 26 Sammlung pflanzengenetischer Ressourcen im Mittelmeerraum (1993)........................ 30 50 Jahre Genbank Gatersleben (1993)............................................................................. 37 Kulturpflanzenforschung und pflanzengenetische Ressourcen (1996) ........................... 45 Paradigmenwechsel im Bereich der pflanzengenetischen Ressourcen (1999) ................ 73 Cucurbitaceae – vom Nutzen der Vielfalt (2002) ............................................................ 81 Kulturpflanzenevolution und Biodiversität (2003).......................................................... 89 N.I. Vavilov im Iran (2006) ............................................................................................. 98 Zur Person ....................................................................................................................... -
Herbs and Spices
10 Herbs and spices Figures 10.2 to 10.15 Fungal diseases 10.1 Canker of hop 10.2 Downy mildew of hop 10.3 Leaf scorch of parsley 10.4 Leaf spots of parsley Alternaria leaf spot Phoma leaf spot Septoria leaf spot 10.5 Powdery mildew of hop, mint, sage and parsley 10.6 Pythium root rot of parsley 10.7 Rust of mint 10.8 Sooty mold of hop 10.9 Verticillium wilt of mint and hop 10.10 Other fungal diseases of herbs Viral and viral-like diseases 10.11 Aster yellows 10.12 Miscellaneous viral diseases Broad bean wilt Carrot motley dwarf Celery mosaic Cucumber mosaic Hop mosaic 10.12 Miscellaneous viral diseases (cont.) Hop nettle head Tomato spotted wilt Insect pests 10.13 Aphids Carrot-willow aphid Green peach aphid Hop aphid Potato aphid Other aphids 10.14 Flea beetles Hop flea beetle Horseradish flea beetle Other crucifer-feeding flea beetles 10.15 Other insect pests Black swallowtails Carrot rust fly European earwig Other pests 10.16 Mites and slugs Additional references FUNGAL DISEASES 10.1 Canker of hop Fusarium sambucinum Fuckel (teleomorph Gibberella pulicaris (Fr.:Fr.) Sacc.) Infection just above the crown can result in girdling and sudden wilting of hop vines. The presence of an obvious canker and the sudden death of the plant differentiates this disease from verticillium wilt, in which the symptoms appear gradually, starting with the lower leaves. Canker has been a minor problem on commercial hop. Prompt removal of infected vines is reported to reduce Fusarium inoculum and subsequent infections.