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Applied and Environmental Microbiology APPLIED AND ENVIRONMENTAL MICROBIOLOGY Volume 74 May 2008 No. 10 GENETICS AND MOLECULAR BIOLOGY Discovering the Hidden Secondary Metabolome of Daniel Krug, Gabriela Zurek, Ole 3058–3068 Myxococcus xanthus: a Study of Intraspecific Diversity Revermann, Michiel Vos, Gregory J. Velicer, and Rolf Mu¨ller Shuttle Vector Expression in Thermococcus kodakaraensis: Thomas J. Santangelo, L’ubomı´ra 3099–3104 Contributions of cis Elements to Protein Synthesis in a Cˇubonˇova´, and John N. Reeve Hyperthermophilic Archaeon Heterogeneous Selection in a Spatially Structured Frances R. Slater, Kenneth D. 3189–3197 Environment Affects Fitness Tradeoffs of Plasmid Carriage Bruce, Richard J. Ellis, Andrew K. in Pseudomonads Lilley, and Sarah L. Turner Characterization of Endogenous Plasmids from Lactobacillus Fang Fang, Sarah Flynn, Yin Li, 3216–3228 salivarius UCC118 Marcus J. Claesson, Jan-Peter van Pijkeren, J. Kevin Collins, Douwe van Sinderen, and Paul W. O’Toole ENZYMOLOGY AND PROTEIN ENGINEERING Conversion Shift of D-Fructose to D-Psicose for Enzyme- Nam-Hee Kim, Hye-Jung Kim, 3008–3013 Catalyzed Epimerization by Addition of Borate Dong-Il Kang, Ki-Woong Jeong, Jung-Kul Lee, Yangmee Kim, and Deok-Kun Oh PHYSIOLOGY AND BIOTECHNOLOGY Efficient Production of L-Ribose with a Recombinant Ryan D. Woodyer, Nathan J. 2967–2975 Escherichia coli Biocatalyst Wymer, F. Michael Racine, Shama N. Khan, and Badal C. Saha Comparison of Microbial and Photochemical Processes and Andrei Bunescu, Pascale Besse- 2976–2984 Their Combination for Degradation of 2-Aminobenzothiazole Hoggan, Martine Sancelme, Gilles Mailhot, and Anne-Marie Delort Bioenergy Production via Microbial Conversion of Residual Lisa M. Gieg, Kathleen E. Duncan, 3022–3029 Oil to Natural Gas and Joseph M. Suflita Stimulation of Zero-trans Rates of Lactose and Maltose Pedro M. R. Guimara˜es, Jyri-Pekka 3076–3084 Uptake into Yeasts by Preincubation with Hexose To Multanen, Lucı´lia Domingues, Jose´ Increase the Adenylate Energy Charge A. Teixeira, and John Londesborough Engineering and Analysis of a Saccharomyces cerevisiae Richard J. S. Baerends, Erik de 3182–3188 Strain That Uses Formaldehyde as an Auxiliary Substrate Hulster, Jan-Maarten A. Geertman, Jean-Marc Daran, Antonius J. A. van Maris, Marten Veenhuis, Ida J. van der Klei, and Jack T. Pronk Application of Functional Genomics to Pathway Lance Kizer, Douglas J. Pitera, 3229–3241 Optimization for Increased Isoprenoid Production Brian F. Pfleger, and Jay D. Keasling Induction and Resuscitation of Viable Nonculturable M. T. Fera, T. L. Maugeri, C. 3266–3268 Arcobacter butzleri Cells Gugliandolo, E. La Camera, V. Lentini, A. Favaloro, D. Bonanno, and M. Carbone Continued on following page Continued from preceding page Metabolic Engineering of Escherichia coli for L-Tyrosine Marı´a I. Cha´vez-Be´jar, Alvaro R. 3284–3290 Production by Expression of Genes Coding for the Lara, Hezraı´Lo´pez, Georgina Chorismate Mutase Domain of the Native Chorismate Herna´ndez-Cha´vez, Alfredo Mutase-Prephenate Dehydratase and a Cyclohexadienyl Martinez, Octavio T. Ramı´rez, Dehydrogenase from Zymomonas mobilis Francisco Bolı´var, and Guillermo Gosset High-Level Folate Production in Fermented Foods by the Filipe Santos, Arno Wegkamp, 3291–3294 B12 Producer Lactobacillus reuteri JCM1112 Willem M. de Vos, Eddy J. Smid, and Jeroen Hugenholtz Repression of the Locus of the Enterocyte Effacement- Ivan Jelcˇic´, Eric Hu¨fner, Herbert 3310–3314 Encoded Regulator of Gene Transcription of Escherichia coli Schmidt, and Christian Hertel O157:H7 by Lactobacillus reuteri Culture Supernatants Is LuxS and Strain Dependent PUBLIC HEALTH MICROBIOLOGY Concentration of Enteroviruses, Adenoviruses, and Elisabetta Lambertini, Susan K. 2990–2996 Noroviruses from Drinking Water by Use of Glass Wool Spencer, Phillip D. Bertz, Frank J. Filters Loge, Burney A. Kieke, and Mark A. Borchardt Bactericidal Effect of Solar Water Disinfection under Real M. Boyle, C. Sichel, P. Ferna´ndez- 2997–3001 Sunlight Conditions Iba´n˜ez, G. B. Arias-Quiroz, M. Iriarte-Pun˜a, A. Mercado, E. Ubomba-Jaswa, and K. G. McGuigan Survival of Influenza Virus on Banknotes Yves Thomas, Guido Vogel, Werner 3002–3007 Wunderli, Patricia Suter, Mark Witschi, Daniel Koch, Caroline Tapparel, and Laurent Kaiser Dynamics of Legionella spp. and Bacterial Populations Nathalie We´ry, Vale´rie Bru-Adan, 3030–3037 during the Proliferation of L. pneumophila in a Cooling Ce´line Minervini, Jean-Philippe Tower Facility Delge´nes, Laurent Garrelly, and Jean-Jacques Godon Correlation between Detection of a Plasmid and High-Level Yann Reynaud, Denis Saulnier, 3038–3047 Virulence of Vibrio nigripulchritudo, a Pathogen of the Didier Mazel, Cyrille Goarant, and Shrimp Litopenaeus stylirostris Fre´de´rique Le Roux Comparison of Methods for Processing Drinking Water Rachel Thomson, Robyn Carter, 3094–3098 Samples for the Isolation of Mycobacterium avium and Chris Gilpin, Chris Coulter, and Mycobacterium intracellulare Megan Hargreaves Comparison of Transcription-Mediated Amplification and Ceri A. Morris, A. Denene 3319–3320 Growth-Based Methods for the Quantitation of Enterococcus Blackwood, Marek Kirs, Neil D. Bacteria in Environmental Waters Buttigieg, Rhian R. Morgan, James J. Hogan, Ian Weeks, and Rachel T. Noble ENVIRONMENTAL MICROBIOLOGY Isolation of the Exoelectrogenic Bacterium Ochrobactrum Yi Zuo, Defeng Xing, John M. 3130–3137 anthropi YZ-1 by Using a U-Tube Microbial Fuel Cell Regan, and Bruce E. Logan Linking Microbial Phylogeny to Metabolic Activity at the Sebastian Behrens, Tina Lo¨sekann, 3143–3150 Single-Cell Level by Using Enhanced Element Labeling- Jennifer Pett-Ridge, Peter K. Catalyzed Reporter Deposition Fluorescence In Situ Weber, Wing-On Ng, Bradley S. Hybridization (EL-FISH) and NanoSIMS Stevenson, Ian D. Hutcheon, David A. Relman, and Alfred M. Spormann Continued on following page Continued from preceding page MICROBIAL ECOLOGY Occurrence and Expression of Gene Transfer Agent Genes Erin J. Biers, Kui Wang, Catherine 2933–2939 in Marine Bacterioplankton Pennington, Robert Belas, Feng Chen, and Mary Ann Moran Unexpected Importance of Potential Parasites in the Ce´cile Lepe`re, Isabelle Domaizon, 2940–2949 Composition of the Freshwater Small-Eukaryote Community and Didier Debroas Collateral Effects of Antibiotics: Carbadox and Thaddeus B. Stanton, Samuel B. 2950–2956 Metronidazole Induce VSH-1 and Facilitate Gene Transfer Humphrey, Vijay K. Sharma, and among Brachyspira hyodysenteriae Strains Richard L. Zuerner Biome-Level Biogeography of Streambed Microbiota Robert H. Findlay, Christine 3014–3021 Yeates, Meredith A. J. Hullar, David A. Stahl, and Louis A. Kaplan Phylogenetic Analysis of Members of the Phycodnaviridae J. B. Larsen, A. Larsen, G. Bratbak, 3048–3057 Virus Family, Using Amplified Fragments of the Major and R.-A. Sandaa Capsid Protein Gene Role of Intestinal Microbiota in Transformation of Bismuth Klaus Michalke, Annette Schmidt, 3069–3075 and Other Metals and Metalloids into Volatile Methyl and Britta Huber, Jo¨rg Meyer, Hydride Derivatives in Humans and Mice Margareta Sulkowski, Alfred V. Hirner, Jens Boertz, Frank Mosel, Philip Dammann, Gero Hilken, Hans J. Hedrich, Martina Dorsch, Albert W. Rettenmeier, and Reinhard Hensel Diverse Responses of the Bivalve-Killing Dinoflagellate Hiroyuki Mizumoto, Yuji Tomaru, 3105–3111 Heterocapsa circularisquama to Infection by a Single- Yoshitake Takao, Yoko Shirai, and Stranded RNA Virus Keizo Nagasaki Anaerobic Consumers of Monosaccharides in a Moderately Alexandra Hamberger, Marcus A. 3112–3120 Acidic Fen Horn, Marc G. Dumont, J. Colin Murrell, and Harold L. Drake Identification and Onion Pathogenicity of Burkholderia Janette L. Jacobs, Anthony C. Fasi, 3121–3129 cepacia Complex Isolates from the Onion Rhizosphere and Alban Ramette, James J. Smith, Onion Field Soil Raymond Hammerschmidt, and George W. Sundin Ecological Dynamics of the Toxic Bloom-Forming Mitsuhiro Yoshida, Takashi 3269–3273 Cyanobacterium Microcystis aeruginosa and Its Cyanophages Yoshida, Aki Kashima, Yukari in Freshwater Takashima, Naohiko Hosoda, Keizo Nagasaki, and Shingo Hiroishi Microbes Enriched in Seawater after Addition of Coral Elke Allers, Christina Niesner, 3274–3278 Mucus Christian Wild, and Jakob Pernthaler Archaea Dominate the Ammonia-Oxidizing Community in Martina Herrmann, Aaron M. 3279–3283 the Rhizosphere of the Freshwater Macrophyte Littorella Saunders, and Andreas Schramm uniflora GEOMICROBIOLOGY Functional Diversity and Electron Donor Dependence of Denise M. Akob, Heath J. Mills, 3159–3170 Microbial Populations Capable of U(VI) Reduction in Thomas M. Gihring, Lee Kerkhof, Radionuclide-Contaminated Subsurface Sediments Joseph W. Stucki, Alexandre S. Anasta´cio, Kuk-Jeong Chin, Kirsten Ku¨sel, Anthony V. Palumbo, David B. Watson, and Joel E. Kostka Biogeochemistry and Community Composition of Iron- and Enoma O. Omoregie, Vincent 3198–3215 Sulfur-Precipitating Microbial Mats at the Chefren Mud Mastalerz, Gert de Lange, Kristina Volcano (Nile Deep Sea Fan, Eastern Mediterranean) L. Straub, Andreas Kappler, Hans Røy, Alina Stadnitskaia, Jean-Paul Foucher, and Antje Boetius Continued on following page Continued from preceding page FOOD MICROBIOLOGY Impact of Vacuum Cooling on Escherichia coli O157:H7 Haiping Li, Mehrdad Tajkarimi, and 3138–3142 Infiltration into Lettuce Tissue Bennie I. Osburn Development of a Microbial Time/Temperature Indicator Hariklia Vaikousi, Costas G. 3242–3250 Prototype for Monitoring the Microbiological Quality of Biliaderis, and Konstantinos P. Chilled
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