bioRxiv preprint doi: https://doi.org/10.1101/2020.03.13.990481; this version posted March 15, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 2 3 4 Gli3 utilizes Hand2 to synergistically regulate tissue-specific transcriptional networks 5 6 Kelsey H. Elliott1,2,8, Xiaoting Chen3, Joseph Salomone1,7,8, Praneet Chaturvedi1, Preston A. Schultz1,2, Sai 7 K. Balchand1,2, Jeffrey D. Servetas4, Aimé e Zuniga5, Rolf Zeller5, Brian Gebelein1, Matthew T. Weirauch3, 8 Kevin A. Peterson4*, Samantha A. Brugmann1,2,6,9* 9 10 11 12 1Division of Developmental Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH USA 13 2Division of Plastic Surgery, Department of Surgery, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH USA 14 3Center for Autoimmune Genomics and Etiology, Department of Pediatrics, Cincinnati Children’s Hospital Medical Center, 15 Cincinnati, OH USA 16 4Jackson Laboratory, Bar Harbor, Maine, USA 17 5Developmental Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland 18 6Shriners Children’s Hospital, Cincinnati OH, USA 19 7Medical-Scientist Training Program, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA. 20 8Graduate Program in Molecular and Developmental Biology, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH 21 45229, USA. 22 9Lead Contact 23 24 25 26 *Co-corresponding Authors:
[email protected];
[email protected] 27 28 29 30 Keywords: Hedgehog, Gli, Hand2, bHLH, mandible, cis-regulatory modules, low affinity binding, 31 transcription factors, functional genomics 32 33 34 Running Title: Novel mechanisms of Gli3 transcriptional output 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 bioRxiv preprint doi: https://doi.org/10.1101/2020.03.13.990481; this version posted March 15, 2020.