GYMNOSPERMS: the Naked Truth by Carol Govan and Gail Kahn, WCFH Docents

Total Page:16

File Type:pdf, Size:1020Kb

GYMNOSPERMS: the Naked Truth by Carol Govan and Gail Kahn, WCFH Docents Wellesley College Friends of Horticulture SPRING 2005 NEWS GYMNOSPERMS: The Naked Truth by Carol Govan and Gail Kahn, WCFH Docents Gymnosperms are a group of seed- support a vascular system bearing, vascular plants that represent an of conducting tissues for evolutionary milestone between spore- water (xylem) and sugars bearing ferns and flowering angiosperms. (phloem) so they can grow The name “gymnosperm” derives from taller and compete for the Greek words gymnos (naked) and sunlight. sperma (seed), referring to the fact that the immature seeds are (here’s the naked The development of seeds part) exposed when pollinated. Cones allowed gymnosperms or fleshy seed coats protect the seeds to inhabit more land of gymnosperms, they are not enclosed habitats than ferns in fruit as are the seeds of angiosperms since seeds, unlike (flowering plants). spores, have a protective Cladistics (or covering and a supply Formerly, plants of food. Approximately were categorized by phylogenetic 144 million years ago, Dioon spinulosum, one of two mature cycads that dominate their morphological systematics) gymnosperms were the the west end of Wet Tropic House. properties (i.e. dominant land plants. Just what they looked is a branch of as they dominated ferns in their heyday, 75-80 genera and 820 species. Compare like). Now they are biology that gymnosperms in turn were unable to this to the angiosperms’ 257,400 species classified based on compete with the angiosperm’s shorter in 13,678 genera and 450 families. their evolutionary categorizes life cycle. Gymnosperms are slow to relationships reproduce: a year may pass between Gymnosperms grow throughout most (Cladistics.) An plants. pollination and fertilization, and the of the world and can be the dominant extinct group of seed may require three years or more to vegetation in many colder and arctic plants called progymnosperms were mature. Angiosperms usually reproduce regions because many are adapted to woody plants like gymnosperms but more rapidly, which is a competitive conserving water during periods of frozen similar to ferns in that they released advantage in surviving the challenges of ground. Their leaves are covered with a spores instead of producing seeds. As changing environments. One possible heavy, waxy cuticle, and pores (stomata) the name implies, this group explanation for the extinction of are sunken below the leaf surface, both of plants is an evolutionary dinosaur species 65 million years ago of which decrease the rate of water ancestor of gymnosperms, is that the slow-growing gymnosperms evaporation or transpiration. They and represents a major could not keep up with the appetites include the tallest and longest living link in the transition of the giant herbivorous dinosaurs. individual plants: bristle cone pines from spore-bearing to Flowering plants began can live for over 4,000 years, and giant seed-producing plants. Some to dominate the redwoods can grow over 300 feet tall. gymnosperms, for instance the ecological niches left Gnetophyta, are evolutionarily by the once-prevalent We have all of the four divisions closer to flowering plants than tree ferns, conifers and of gymnosperms represented in the they are to other gymnosperms. cycads that the dinosaurs consumed. Wellesley College Botanic Gardens: Though a gymnosperm is now more of The major climatic changes of this Coniferophyta (conifers), Cycadophyta a descriptive term than a basis of plant period also resulted in a competitive (cycads), Ginkgophyta (Ginkgo biloba), classification, all have seeds (not spores) advantage for flowering plants. Today and Gnetophyta (Mormon tea or and are woody (not herbaceous) to gymnosperms represent only 15 families, ephedra). continued on page 6 1 our varied constituency. When you Notes from next visit the Gardens, be sure to stop and read the Floraphiles plant profiles, the Director check out the Plants in Bloom board and use the new Biomes and Habitats of by Dr. Duncan Himmelman, Director the WCBG guides as you explore the Wellesley College Botanic Gardens greenhouses, Hunnewell Arboretum and [email protected] Alexandra Gardens. Through these fine efforts we are compiling a core of digital Mission Statement photographs and plant information of the “The Wellesley College Botanic Farewell Tea in the Visitor Center. Duncan Gardens that will eventually be reflected Himmelman in the center flanked on left by on the Friends’ website and new Visitor Gardens are dedicated to promoting WCBG Senior Horticulturist Tony Antonucci Center displays. All of this first-rate and on right by WCBG Horticulturist David work underscores the significant role the value of plant diversity through Sommers. exceptional education, interpretation, our Friends play in “Making A Difference With Plants” and, figuratively speaking, research and public outreach.” the structural and mechanical elements, growing the Gardens! thus ensuring the continued legacy of this The years ahead will certainly be ones of The Blizzard of 2005 resulted in some important component of the Wellesley continued growth and development for of the most picturesque scenery in the College Botanic Gardens for students, all aspects of the WCBG. I am pleased to Gardens in years! Yes, it also left us faculty, staff, and area visitors. have been here to build the foundation beneath two feet of snow, making it Reflecting on other, less stressful events for much of this anticipated change, difficult to maneuver our way to the of the past several months, I realize one of the mandates of the directorship Gardens. But the warm refuge provided how quickly time flies by yet how much which I undertook when I started in by the Ferguson Greenhouses made progress we have made here at the the summer of 2001. Personally, as I the effort worth it. The houses held up Gardens within that time. The plants write this, I am on the cusp of moving admirably under the snow load, and the in the Ferguson Greenhouses have been along in my career to a new, creatively plants made it through unscathed. This successfully reorganized to underscore challenging position outside of the was good news, considering the leak a stronger vision for the collections: College. Though sad to be leaving, I that erupted in the steam pipes in the economically important plants from around have truly enjoyed sharing the energy, Cryptogam House the prior week as the the world. The Hydrophyte House has enthusiasm and commitment of the temperatures plummeted! Thankfully, the been embellished with water lilies, Friends to these cherished Gardens. pipe fitters came in and repaired it before taro, and species of bamboo that were My passion for all things horticultural any damage to the plants could occur. not previously included. The annual has been reflected in theirs, serving as With a mere one inch of double-paned chrysanthemum display was the best it’s inspiration for me to work diligently at glass standing between life and death for been in years according to comments from improving the Gardens. The Friends the tropical ferns, this event reminded both visitors and Friends of Horticulture. are a strong, focused group that is fully us of how important the structural Wellesley College fine arts classes, public capable of generating new ideas and goals integrity of the greenhouses is to our tours and educational programs continue to enhance their role in the Gardens invaluable collection of plants. Looking to fill the Ferguson Greenhouses with and achieving them through thoughtful to the future, the Greenhouse Planning excited “plant-speak” on a daily basis. All creativity. Thank you all for your kind Study done in 2003 provides the basis of this vibrant activity emphasizes the words and good wishes! I have taken for bringing new life to the Ferguson value of the Gardens to the College and great pleasure in working with you, and Greenhouses, including an overhaul of all greater Wellesley communities. will sincerely miss my community of people here at the College and in the Supporting these wonderful programs Wellesley College Friends of Horticulture surrounding area. I wish you well as you requires many hours of dedicated staff and move forward to a robust and rewarding 106 Central Street volunteer time. To this end, the Friends Wellesley, MA 02481-8203 future! I leave you with the following have worked unstintingly to develop a quote: 781-283-3094 broader base of assistance through both [email protected] “people power” and educational materials. “A garden is never so good as it This fall we offered a third season of will be next year.” Editorial Committee: the revised Docent Training Program THOMAS COOPER Carole M. Jansson Ely ’79 that has “graduated” approximately 25 Nancy Dean Kingman ’53 new members since 2002. These men Elizabeth Reece and women are producing exciting new Nancy Webb resources to serve the unique needs of 2 Spring Fling by Nancy Dean Kingman ’53 Spring comes early to Wellesley College’s structures (modified with one seed leaf or Margaret C. Ferguson Greenhouses. leaves) attached to a flat cotyledon. Like grasses, During February and March, the display basal plate that actually is orchids, philodendron, house is awash with scents and sights the stem from which the and spiderwort, they of flowering plants. Various species of roots grow downwards. show several similar, blooming narcissi, crocus, hyacinths, A papery outer cover specific characteristics. tulips, lilies and amaryllis crowd protects the bulb. They Look closely and you’ll greenhouse benches—a certain spring are members of the Lily see flower parts in threes, tonic for the winter-weary visitors. family along with lilies or multiples thereof, and While these hardy bulbs are natives and muscari (Grape leaves clasping stems with, of the Mediterranean area and central Hyacinths). Lilies, by the usually, parallel veins. Asia, they are often planted in New way, do not have that Narcissus by Sarah Roche So important are spring England gardens.
Recommended publications
  • Clinical Uses and Toxicity of Ephedra Sinica: an Evidence-Based Comprehensive Retrospective Review (2004–2017)
    Pharmacogn J. 2019; 11(1): 447-452 A Multifaceted Journal in the field of Natural Products and Pharmacognosy Review Article www.phcogj.com | www.journalonweb.com/pj | www.phcog.net Clinical uses and Toxicity of Ephedra sinica: An Evidence-Based Comprehensive Retrospective Review (2004–2017) Walaa Al saeed1, Marwa Al Dhamen1, Rizwan Ahmad2*, Niyaz Ahmad3, Atta Abbas Naqvi4 ABSTRACT Background: Ephedra sinica (ES) (Ma-huang) is a well-known plant due to its widespread therapeutic uses. However, many adverse effects such as hepatitis, nephritises, and cardio- vascular toxicity have been reported for this plant. Few of these side effects are reversible whereas others are irreversible and may even lead to death. Aim of the Study: The aim of this study was to investigate the clinical uses and toxicity cases/consequences associated 1 Walaa Al saeed , Marwa Al with the use of ES. The review will compare and evaluate the cases reported for ES and identify Dhamen1, Rizwan Ah- the causes which make the plant a poisonous one. Materials and Methods: An extensive mad2*, Niyaz Ahmad3, Atta literature review was conducted from 2004 to 2017, and research literature regarding the Abbas Naqvi4 clinical cases were collected using databases and books such as Google Scholar, Science Direct, Research gate, PubMed, and Web of Science/Thomson Reuters whereas the keywords 1College of Clinical Pharmacy, Imam searched were “Ephedra sinica,” clinical cases of Ephedra sinica, “Ma-hung poisonous,” Abdulrahman Bin Faisal University, “Ma-hung toxicity reported cases and treatment,” and “Ephedra Sinica toxicity reported cases Dammam, SAUDI ARABIA. and treatment.” Results: eleven different cases were identified which met the eligibility criteria 2Natural Products and Alternative Medi- and were studied in detail to extract out the findings.
    [Show full text]
  • Discrimination of Three Ephedra Species and Their Geographical
    www.nature.com/scientificreports OPEN Discrimination of three Ephedra species and their geographical origins based on multi-element Received: 6 December 2017 Accepted: 22 June 2018 fngerprinting by inductively Published: xx xx xxxx coupled plasma mass spectrometry Xiaofang Ma1, Lingling Fan1, Fuying Mao1,2, Yunsheng Zhao1,2,3, Yonggang Yan4, Hongling Tian5, Rui Xu1, Yanqun Peng1 & Hong Sui1,2 Discrimination of species and geographical origins of traditional Chinese medicine (TCM) is essential to prevent adulteration and inferior problems. We studied Ephedra sinica Stapf, Ephedra intermedia Schrenk et C.A.Mey. and Ephedra przewalskii Bge. to investigate the relationship between inorganic element content and these three species and their geographical origins. 38 elemental fngerprints from six major Ephedra-producing regions, namely, Inner Mongolia, Ningxia, Gansu, Shanxi, Shaanxi, and Sinkiang, were determined to evaluate the importance of inorganic elements to three species and their geographical origins. The contents of 15 elements, namely, N, P, K, S, Ca, Mg, Fe, Mn, Na, Cl, Sr, Cu, Zn, B, and Mo, of Ephedra samples were measured using inductively coupled plasma mass spectroscopy. Elemental contents were used as chemical indicators to classify species and origins of Ephedra samples using a radar plot and multivariate data analysis, including hierarchical cluster analysis (HCA), principal component analysis (PCA), and discriminant analysis (DA). Ephedra samples from diferent species and geographical origins could be diferentiated. This study showed that inorganic elemental fngerprint combined with multivariate statistical analysis is a promising tool for distinguishing three Ephedra species and their geographical origins, and this strategy might be an efective method for authenticity discrimination of TCM.
    [Show full text]
  • Scientific Assessment of Ephedra Species (Ephedra Spp.)
    Annex 3 Ref. Ares(2010)892815 – 02/12/2010 Recognising risks – Protecting Health Federal Institute for Risk Assessment Annex 2 to 5-3539-02-5591315 Scientific assessment of Ephedra species (Ephedra spp.) Purpose of assessment The Federal Office of Consumer Protection and Food Safety (BVL), in collaboration with the ALS working party on dietary foods, nutrition and classification issues, has compiled a hit list of 10 substances, the consumption of which may pose a health risk. These plants, which include Ephedra species (Ephedra L.) and preparations made from them, contain substances with a strong pharmacological and/or psychoactive effect. The Federal Ministry of Food, Agriculture and Consumer Protection has already asked the EU Commission to start the procedure under Article 8 of Regulation (EC) No 1925/2006 for these plants and preparations, for the purpose of including them in one of the three lists in Annex III. The assessment applies to ephedra alkaloid-containing ephedra haulm. The risk assessment of the plants was carried out on the basis of the Guidance on Safety Assessment of botanicals and botanical preparations intended for use as ingredients in food supplements published by the EFSA1 and the BfR guidelines on health assessments2. Result We know that ingestion of ephedra alkaloid-containing Ephedra haulm represents a risk from medicinal use in the USA and from the fact that it has now been banned as a food supplement in the USA. Serious unwanted and sometimes life-threatening side effects are associated with the ingestion of food supplements containing ephedra alkaloids. Due to the risks described, we would recommend that ephedra alkaloid-containing Ephedra haulm be classified in List A of Annex III to Regulation (EC) No 1925/2006.
    [Show full text]
  • Gymnosperms the MESOZOIC: ERA of GYMNOSPERM DOMINANCE
    Chapter 24 Gymnosperms THE MESOZOIC: ERA OF GYMNOSPERM DOMINANCE THE VASCULAR SYSTEM OF GYMNOSPERMS CYCADS GINKGO CONIFERS Pinaceae Include the Pines, Firs, and Spruces Cupressaceae Include the Junipers, Cypresses, and Redwoods Taxaceae Include the Yews, but Plum Yews Belong to Cephalotaxaceae Podocarpaceae and Araucariaceae Are Largely Southern Hemisphere Conifers THE LIFE CYCLE OF PINUS, A REPRESENTATIVE GYMNOSPERM Pollen and Ovules Are Produced in Different Kinds of Structures Pollination Replaces the Need for Free Water Fertilization Leads to Seed Formation GNETOPHYTES GYMNOSPERMS: SEEDS, POLLEN, AND WOOD THE ECOLOGICAL AND ECONOMIC IMPORTANCE OF GYMNOSPERMS The Origin of Seeds, Pollen, and Wood Seeds and Pollen Are Key Reproductive SUMMARY Innovations for Life on Land Seed Plants Have Distinctive Vegetative PLANTS, PEOPLE, AND THE Features ENVIRONMENT: The California Coast Relationships among Gymnosperms Redwood Forest 1 KEY CONCEPTS 1. The evolution of seeds, pollen, and wood freed plants from the need for water during reproduction, allowed for more effective dispersal of sperm, increased parental investment in the next generation and allowed for greater size and strength. 2. Seed plants originated in the Devonian period from a group called the progymnosperms, which possessed wood and heterospory, but reproduced by releasing spores. Currently, five lineages of seed plants survive--the flowering plants plus four groups of gymnosperms: cycads, Ginkgo, conifers, and gnetophytes. Conifers are the best known and most economically important group, including pines, firs, spruces, hemlocks, redwoods, cedars, cypress, yews, and several Southern Hemisphere genera. 3. The pine life cycle is heterosporous. Pollen strobili are small and seasonal. Each sporophyll has two microsporangia, in which microspores are formed and divide into immature male gametophytes while still retained in the microsporangia.
    [Show full text]
  • GRASSES, Its Center
    CALAMAGROSTIS zones 5-9 x acutiflora ‘Avalanche’ wheat; flowers ESU 36”-60” in seed, 12-24”W Feather reed Grass. A variegated, brighter form of ‘Karl Forester'. Foliage has a wide white stripe down GRASSES, its center. Creamy white seed heads turn to a golden straw in fall. Reportedly does well in heavy clay soils, GROUNDCOVERS, unlike many other ornamental grasses. $9.99 2.75 Qt./2.6 l. AND VINES PRICE GUIDE 2017 ORNAMENTAL GRASS ...... 1 GROUNDCOVERS ............ 7 VINES ....................... 16 Prices and pot sizes are a. ‘Karl Foerster’ wheat; flowers ESU 36”-60” in seed, 18-24”W subject to change. Feather Reed Grass. A sterile hybrid, with upright, tight habit. Tawny, wheat-colored feathery plumes appear early in the summer and last all season. ORNAMENTAL Introduced in 1939; brought to the USA in 1964. ‘Perennial Plant of the Year’ for 2001. Looks great GRASSES with echinacea and eryngium. Zones 4-8 ARRHENATHERUM zones 4-9 $7.99 2Qt./1.89 l., $13.99 #1 container elatius var. bulbosum ‘Variegatum’ CAREX zones 5-9 clump; flowers MSU 12-18”H x 18”W Bulbous Oat Grass. Loosely tufted plant with semi- (Sedge) erect, narrow, gray-green leaves with white edges. Silvery-green panicles with oat-like spikelets. $7.99 2Qt./1.89 l. BOUTELOUA zones 3-10 gracilis clump; flowers LSP-MSU 24” x 18-24”W Side Oats Grass, Blue Grama, Mosquito Grass. This native prairie grass has narrow green blades and unique flower spikes which are attached at right angles to the stems and resemble mosquito larvae.
    [Show full text]
  • The Jurassic Fossil Wood Diversity from Western Liaoning, NE China
    Jiang et al. Journal of Palaeogeography (2019) 8:1 https://doi.org/10.1186/s42501-018-0018-y Journal of Palaeogeography RESEARCH Open Access The Jurassic fossil wood diversity from western Liaoning, NE China Zi-Kun Jiang1,2, Yong-Dong Wang2,3*, Ning Tian4,5, Ao-Wei Xie2,6, Wu Zhang7, Li-Qin Li2 and Min Huang1 Abstract Western Liaoning is a unique region in China that bears diverse types of Jurassic plants, including leaves, fern rhizomes, and wood, providing significant proxy for vegetation and palaeoenvironment reconstruction of the well-known Yanliao Flora in East Asia. In particular, the silicified wood is very abundant in the fossil Lagerstätte of the Jurassic Tiaojishan Formation in Beipiao, western Liaoning. Previous and recent systematic investigations documented a high diversity of the Jurassic wood assemblages. These assemblages are dominated by conifers, followed by cycads and ginkgoaleans. In total, about 30 species belonging to 21 genera of fossil wood have been recorded so far, which are represented by Cycadopsida, Ginkgopsida, Coniferopsida, and Gymnospermae incertae sedis. The evolutionary implications of several distinctive fossil wood taxa as well as palaeoclimate implications are summarized based on their anatomical structures and growth ring patterns. This work approaches the vegetation development and evolutionary significances of the wood taxa and their relatives, and provides clues for the further understanding of the diversity of the Jurassic Yanliao Flora in East Asia. Keywords: Fossil wood, Diversity, Evolution, Tiaojishan Formation, Jurassic 1 Introduction 2004;Wangetal.,2009). Among these localities, western Fossil floras are a significant record for the vegetation Liaoning is a well-known fossil Lagerstätte with diverse and for the palaeoenvironment reconstructions of the and well-preserved fossil plant foliages and wood (Zhang Mesozoic.
    [Show full text]
  • Chemical Element Concentrations of Cycad Leaves: Do We Know Enough?
    horticulturae Review Chemical Element Concentrations of Cycad Leaves: Do We Know Enough? Benjamin E. Deloso 1 , Murukesan V. Krishnapillai 2 , Ulysses F. Ferreras 3, Anders J. Lindström 4, Michael Calonje 5 and Thomas E. Marler 6,* 1 College of Natural and Applied Sciences, University of Guam, Mangilao, GU 96923, USA; [email protected] 2 Cooperative Research and Extension, Yap Campus, College of Micronesia-FSM, Colonia, Yap 96943, Micronesia; [email protected] 3 Philippine Native Plants Conservation Society Inc., Ninoy Aquino Parks and Wildlife Center, Quezon City 1101, Philippines; [email protected] 4 Plant Collections Department, Nong Nooch Tropical Botanical Garden, 34/1 Sukhumvit Highway, Najomtien, Sattahip, Chonburi 20250, Thailand; [email protected] 5 Montgomery Botanical Center, 11901 Old Cutler Road, Coral Gables, FL 33156, USA; [email protected] 6 Western Pacific Tropical Research Center, University of Guam, Mangilao, GU 96923, USA * Correspondence: [email protected] Received: 13 October 2020; Accepted: 16 November 2020; Published: 19 November 2020 Abstract: The literature containing which chemical elements are found in cycad leaves was reviewed to determine the range in values of concentrations reported for essential and beneficial elements. We found 46 of the 358 described cycad species had at least one element reported to date. The only genus that was missing from the data was Microcycas. Many of the species reports contained concentrations of one to several macronutrients and no other elements. The cycad leaves contained greater nitrogen and phosphorus concentrations than the reported means for plants throughout the world. Magnesium was identified as the macronutrient that has been least studied.
    [Show full text]
  • Plant Evolution an Introduction to the History of Life
    Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular.
    [Show full text]
  • Number of Living Species in Australia and the World
    Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure.
    [Show full text]
  • Lessons from 20 Years of Plant Genome Sequencing: an Unprecedented Resource in Need of More Diverse Representation
    bioRxiv preprint doi: https://doi.org/10.1101/2021.05.31.446451; this version posted May 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Lessons from 20 years of plant genome sequencing: an unprecedented resource in need of more diverse representation Authors: Rose A. Marks1,2,3, Scott Hotaling4, Paul B. Frandsen5,6, and Robert VanBuren1,2 1. Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA 2. Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA 3. Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa 4. School of Biological Sciences, Washington State University, Pullman, WA, USA 5. Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA 6. Data Science Lab, Smithsonian Institution, Washington, DC, USA Keywords: plants, embryophytes, genomics, colonialism, broadening participation Correspondence: Rose A. Marks, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA; Email: [email protected]; Phone: (603) 852-3190; ORCID iD: https://orcid.org/0000-0001-7102-5959 Abstract The field of plant genomics has grown rapidly in the past 20 years, leading to dramatic increases in both the quantity and quality of publicly available genomic resources. With an ever- expanding wealth of genomic data from an increasingly diverse set of taxa, unprecedented potential exists to better understand the evolution and genome biology of plants.
    [Show full text]
  • The Supramolecular Organization of Self-Assembling Chlorosomal Bacteriochlorophyll C, D,Ore Mimics
    The supramolecular organization of self-assembling chlorosomal bacteriochlorophyll c, d,ore mimics Tobias Jochum*†, Chilla Malla Reddy†‡, Andreas Eichho¨ fer‡, Gernot Buth*, Je¸drzej Szmytkowski§¶, Heinz Kalt§¶, David Moss*, and Teodor Silviu Balaban‡¶ʈ *Institute for Synchrotron Radiation, Karlsruhe Institute of Technology, Forschungszentrum Karlsruhe, Postfach 3640, D-76021 Karlsruhe, Germany; ‡Institute for Nanotechnology, Karlsruhe Institute of Technology, Forschungszentrum Karlsruhe, Postfach 3640, D-76021 Karlsruhe, Germany; §Institute of Applied Physics, Karlsruhe Institute of Technology, Universita¨t Karlsruhe (TH), D-76131 Karslruhe, Germany; and ¶Center for Functional Nanostructures, Universita¨t Karlsruhe (TH), D-76131 Karslruhe, Germany Edited by James R. Norris, University of Chicago, Chicago, IL, and accepted by the Editorial Board July 18, 2008 (received for review March 22, 2008) Bacteriochlorophylls (BChls) c, d, and e are the main light-harvesting direct structural evidence from x-ray single crystal structures, the pigments of green photosynthetic bacteria that self-assemble into exact nature of BChl superstructures remain elusive and these nanostructures within the chlorosomes forming the most efficient have been controversially discussed in the literature (1–3, 7, antennas of photosynthetic organisms. All previous models of the 11–17). It is now generally accepted that the main feature of chlorosomal antennae, which are quite controversially discussed chlorosomes is the self-assembly of BChls and that these pig- because no single crystals could be grown so far from these or- ments are not bound by a rigid protein matrix as is the case of ganelles, involve a strong hydrogen-bonding interaction between the other, well characterized light-harvesting systems (1). Small- 31 hydroxyl group and the 131 carbonyl group.
    [Show full text]
  • Sequence Analysis of Chloroplast Chlb Gene of Medicinal Ephedra Species and Its Application to Authentication of Ephedra Herb
    June 2006 Biol. Pharm. Bull. 29(6) 1207—1211 (2006) 1207 Sequence Analysis of Chloroplast chlB Gene of Medicinal Ephedra Species and Its Application to Authentication of Ephedra Herb a a b b b Yahong GUO, Ayako TSURUGA, Shigeharu YAMAGUCHI, Koji OBA, Kasumi IWAI, c,1) ,a Setsuko SEKITA and Hajime MIZUKAMI* a Graduate School of Pharmaceutical Sciences, Nagoya City University; 3–1 Tanabe-dori, Mizuho-ku, Nagoya 467–8603, Japan: b Research and Development Department, Asgen Pharmaceutical Co., Ltd.; 2–28–8 Izumi, Higashi-ku, Nagoya 461–8531, Japan: and c Tsukuba Medicinal Plant Research Station, National Institute of Health Sciences; 1 Hachimandai, Tsukuba, Ibaraki 305–0843, Japan. Received December 26, 2005; accepted February 15, 2006 Chloroplast chlB gene encoding subunit B of light-independent protochlorophyllide reductase was amplified from herbarium and crude drug specimens of Ephedra sinica, E. intermedia, E. equisetina, and E. przewalskii. Se- quence comparison of the chlB gene indicated that all the E. sinica specimens have the same sequence type (Type S) distinctive from other species, while there are two sequence types (Type E1 and Type E2) in E. equisetina. E. intermedia and E. prezewalskii revealed an identical sequence type (Type IP). E. sinica was also identified by di- gesting the chlB fragment with Bcl I. A novel method for DNA authentication of Ephedra Herb based on the se- quences of the chloroplast chlB gene and internal transcribed spacer of nuclear rRNA genes was developed and successfully applied for identification of the crude drugs obtained in the Chinese market. Key words chloroplast chlB; DNA authentication; Ephedra Herb; polymerase chain reaction-restriction fragment length poly- morphism Ephedra Herb is an important crude drug which has been nucleotide deletions were present in the trnL/trnF spacer of used in Chinese and Japanese traditional (Kampo) medi- E.
    [Show full text]