Review of Fungal Diseases in Poplar"
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<I>Mycosphaerella</I> Species of Quarantine
Persoonia 29, 2012: 101–115 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158512X661282 DNA barcoding of Mycosphaerella species of quarantine importance to Europe W. Quaedvlieg1,2, J.Z. Groenewald1, M. de Jesús Yáñez-Morales3, P.W. Crous1,2,4 Key words Abstract The EU 7th Framework Program provided funds for Quarantine Barcoding of Life (QBOL) to develop a quick, reliable and accurate DNA barcode-based diagnostic tool for selected species on the European and Mediter- EPPO ranean Plant Protection Organization (EPPO) A1/A2 quarantine lists. Seven nuclear genomic loci were evaluated Lecanosticta to determine those best suited for identifying species of Mycosphaerella and/or its associated anamorphs. These Q-bank genes included -tubulin (Btub), internal transcribed spacer regions of the nrDNA operon (ITS), 28S nrDNA (LSU), QBOL β Actin (Act), Calmodulin (Cal), Translation elongation factor 1-alpha (EF-1α) and RNA polymerase II second larg- est subunit (RPB2). Loci were tested on their Kimura-2-parameter-based inter- and intraspecific variation, PCR amplification success rate and ability to distinguish between quarantine species and closely related taxa. Results showed that none of these loci was solely suited as a reliable barcoding locus for the tested fungi. A combination of a primary and secondary barcoding locus was found to compensate for individual weaknesses and provide reliable identification. A combination of ITS with either EF-1α or Btub was reliable as barcoding loci for EPPO A1/A2-listed Mycosphaerella species. Furthermore, Lecanosticta acicola was shown to represent a species complex, revealing two novel species described here, namely L. -
Fenestelloid Clades of the Cucurbitariaceae
Persoonia 44, 2020: 1–40 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2020.44.01 Fenestelloid clades of the Cucurbitariaceae W.M. Jaklitsch1,2, H. Voglmayr1,2 Key words Abstract Fresh collections and their ascospore and conidial isolates backed up by type studies and molecular phylogenetic analyses of a multigene matrix of partial nuSSU-, complete ITS, partial LSU rDNA, rpb2, tef1 and tub2 Cucurbitaria sequences were used to evaluate the boundaries and species composition of Fenestella and related genera of the Dothideomycetes Cucurbitariaceae. Eight species, of which five are new, are recognised in Fenestella s.str., 13 in Parafenestella with multigene phylogenetic analysis eight new species and two in the new genus Synfenestella with one new species. Cucurbitaria crataegi is combined new taxa in Fenestella, C. sorbi in Synfenestella, Fenestella faberi and Thyridium salicis in Parafenestella. Cucurbitaria Phoma subcaespitosa is distinct from C. sorbi and combined in Neocucurbitaria. Fenestella minor is a synonym of Valsa Pleosporales tetratrupha, which is combined in Parafenestella. Cucurbitaria marchica is synonymous with Parafenestella salicis, Pyrenochaeta Fenestella bavarica with S. sorbi, F. macrospora with F. media, and P. mackenziei is synonymous with P. faberi, and the latter is lectotypified. Cucurbitaria sorbi, C. subcaespitosa and Fenestella macrospora are lecto- and epitypified, Cucurbitaria crataegi, Fenestella media, F. minor and Valsa tetratrupha are epitypified in order to stabilise the names in their phylogenetic positions. A neotype is proposed for Thyridium salicis. A determinative key to species is given. Asexual morphs of fenestelloid fungi are phoma-like and do not differ from those of other representatives of the Cucurbitariaceae. -
Melampsora Medusae
European and Mediterranean Plant Protection Organization PM 7/93 (1) Organisation Europe´enne et Me´diterrane´enne pour la Protection des Plantes Diagnostics Diagnostic Melampsora medusae Specific scope Specific approval and amendment This standard describes a diagnostic protocol for Melampsora Approved in 2009–09. medusae1 Populus trichocarpa, and their interspecific hybrids (Frey et al., Introduction 2005). In Europe, most of the cultivated poplars are P. · eur- Melampsora medusae Thu¨men is one of the causal agents of americana (P. deltoides · P. nigra)andP. · interamericana poplar rust. The main species involved in this disease in Europe (P. trichocarpa · P. deltoides) hybrids. In addition, Shain (1988) on cultivated poplars are Melampsora larici-populina and showed evidence for the existence of two formae speciales within Melampsora allii-populina. All three species cause abundant M. medusae and named them M. medusae f. sp. deltoidae and uredinia production on leaves, which can lead to premature M. medusae f. sp. tremuloidae according to their primary host, defoliation and growth reduction. After several years of severe Populus deltoides and Populus tremuloides, respectively. Neither infection leading to repeated defoliation, the disease may predis- the EU directive, nor the EPPO make the distinction between pose the trees to dieback or even death for the younger trees. these two formae speciales but only refer to M. medusae.Not- Melampsora rust is a very common disease of poplar trees, which withstanding, since M. medusae was only reported in Europe on can cause severe economic losses in commercial poplar cultiva- poplars from the sections Aigeiros and Tacamahaca,andin tion because of the emergence and spread of new pathotypes of respect with the host specialization, it can be stated that only M. -
Wooden and Bamboo Commodities Intended for Indoor and Outdoor Use
NAPPO Discussion Document DD 04: Wooden and Bamboo Commodities Intended for Indoor and Outdoor Use Prepared by members of the Pest Risk Analysis Panel of the North American Plant Protection Organization (NAPPO) December 2011 Contents Introduction ...........................................................................................................................3 Purpose ................................................................................................................................4 Scope ...................................................................................................................................4 1. Background ....................................................................................................................4 2. Description of the Commodity ........................................................................................6 3. Assessment of Pest Risks Associated with Wooden Articles Intended for Indoor and Outdoor Use ...................................................................................................................6 Probability of Entry of Pests into the NAPPO Region ...........................................................6 3.1 Probability of Pests Occurring in or on the Commodity at Origin ................................6 3.2 Survival during Transport .......................................................................................... 10 3.3 Probability of Pest Surviving Existing Pest Management Practices .......................... 10 3.4 Probability -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
Laetisaria Arvalis (Aphyllophorales, Corticiaceae): a Possible Biological Control Agent for Rhizoctonia Solani and Pythium Species1
LAETISARIA ARVALIS (APHYLLOPHORALES, CORTICIACEAE): A POSSIBLE BIOLOGICAL CONTROL AGENT FOR RHIZOCTONIA SOLANI AND PYTHIUM SPECIES1 H. H. BURDSALL, JR. Center for Forest Mycology Research, Forest Products Laboratory2 USDA, Forest Service, Madison, Wisconsin 53705 H. C. HOCH Department of Plant Pathology, New York State Agricultural Experiment Station, Cornell University, Geneva, New York 14456 M. G. BOOSALIS Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska 68583 AND E. C. SETLIFF State University of New York, College of Environmental Science and Forestry. School of Biology, Chemistry, and Forestry, Syracuse, New York 13210 SUMMARY Laetisaria arvalis, a soil-inhabiting basidiomycete, is described from culture as a new species. Descriptions and illustrations of the basidiocarps and cultures are provided and the relationship of L. arvalis to Phanero chaete as well as its potential importance as a biological control agent are discussed. About 1960, M. G. Boosalis isolated a fungus with clamp connections from soil planted to sugar beets (Beta vulgaris L.) for more than 50 yr near Scottsbluff, Scotts Bluff County, Neb. His early studies of this isolate indicated that it might be used as a biological control agent against Thanatephorus cucumerus (Frank) Donk (anamorph : Rhizo ctonia solani Kuhn) the cause of a root rot of sugar beets. Recently the 1This article was written arid prepared by U.S. Government employees on official time, and it is therefore in the public domain. 2Maintained at Madison, Wis., in cooperation with the University of Wisconsin. 728 729 BURDSALL ET AL. : LAETISARIA ARVALIS isolate has been reported to be a hyperparasite of R. solani (Odvody et al., 1977) and a possible biological control agent of Pythium ultimum Trow (Hoch and Abawi, 1979). -
University of California Santa Cruz Responding to An
UNIVERSITY OF CALIFORNIA SANTA CRUZ RESPONDING TO AN EMERGENT PLANT PEST-PATHOGEN COMPLEX ACROSS SOCIAL-ECOLOGICAL SCALES A dissertation submitted in partial satisfaction of the requirements for the degree of DOCTOR OF PHILOSOPHY in ENVIRONMENTAL STUDIES with an emphasis in ECOLOGY AND EVOLUTIONARY BIOLOGY by Shannon Colleen Lynch December 2020 The Dissertation of Shannon Colleen Lynch is approved: Professor Gregory S. Gilbert, chair Professor Stacy M. Philpott Professor Andrew Szasz Professor Ingrid M. Parker Quentin Williams Acting Vice Provost and Dean of Graduate Studies Copyright © by Shannon Colleen Lynch 2020 TABLE OF CONTENTS List of Tables iv List of Figures vii Abstract x Dedication xiii Acknowledgements xiv Chapter 1 – Introduction 1 References 10 Chapter 2 – Host Evolutionary Relationships Explain 12 Tree Mortality Caused by a Generalist Pest– Pathogen Complex References 38 Chapter 3 – Microbiome Variation Across a 66 Phylogeographic Range of Tree Hosts Affected by an Emergent Pest–Pathogen Complex References 110 Chapter 4 – On Collaborative Governance: Building Consensus on 180 Priorities to Manage Invasive Species Through Collective Action References 243 iii LIST OF TABLES Chapter 2 Table I Insect vectors and corresponding fungal pathogens causing 47 Fusarium dieback on tree hosts in California, Israel, and South Africa. Table II Phylogenetic signal for each host type measured by D statistic. 48 Table SI Native range and infested distribution of tree and shrub FD- 49 ISHB host species. Chapter 3 Table I Study site attributes. 124 Table II Mean and median richness of microbiota in wood samples 128 collected from FD-ISHB host trees. Table III Fungal endophyte-Fusarium in vitro interaction outcomes. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Diseases of Trees in the Great Plains
United States Department of Agriculture Diseases of Trees in the Great Plains Forest Rocky Mountain General Technical Service Research Station Report RMRS-GTR-335 November 2016 Bergdahl, Aaron D.; Hill, Alison, tech. coords. 2016. Diseases of trees in the Great Plains. Gen. Tech. Rep. RMRS-GTR-335. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 229 p. Abstract Hosts, distribution, symptoms and signs, disease cycle, and management strategies are described for 84 hardwood and 32 conifer diseases in 56 chapters. Color illustrations are provided to aid in accurate diagnosis. A glossary of technical terms and indexes to hosts and pathogens also are included. Keywords: Tree diseases, forest pathology, Great Plains, forest and tree health, windbreaks. Cover photos by: James A. Walla (top left), Laurie J. Stepanek (top right), David Leatherman (middle left), Aaron D. Bergdahl (middle right), James T. Blodgett (bottom left) and Laurie J. Stepanek (bottom right). To learn more about RMRS publications or search our online titles: www.fs.fed.us/rm/publications www.treesearch.fs.fed.us/ Background This technical report provides a guide to assist arborists, landowners, woody plant pest management specialists, foresters, and plant pathologists in the diagnosis and control of tree diseases encountered in the Great Plains. It contains 56 chapters on tree diseases prepared by 27 authors, and emphasizes disease situations as observed in the 10 states of the Great Plains: Colorado, Kansas, Montana, Nebraska, New Mexico, North Dakota, Oklahoma, South Dakota, Texas, and Wyoming. The need for an updated tree disease guide for the Great Plains has been recog- nized for some time and an account of the history of this publication is provided here. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Fungal Allergy and Pathogenicity 20130415 112934.Pdf
Fungal Allergy and Pathogenicity Chemical Immunology Vol. 81 Series Editors Luciano Adorini, Milan Ken-ichi Arai, Tokyo Claudia Berek, Berlin Anne-Marie Schmitt-Verhulst, Marseille Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Fungal Allergy and Pathogenicity Volume Editors Michael Breitenbach, Salzburg Reto Crameri, Davos Samuel B. Lehrer, New Orleans, La. 48 figures, 11 in color and 22 tables, 2002 Basel · Freiburg · Paris · London · New York · New Delhi · Bangkok · Singapore · Tokyo · Sydney Chemical Immunology Formerly published as ‘Progress in Allergy’ (Founded 1939) Edited by Paul Kallos 1939–1988, Byron H. Waksman 1962–2002 Michael Breitenbach Professor, Department of Genetics and General Biology, University of Salzburg, Salzburg Reto Crameri Professor, Swiss Institute of Allergy and Asthma Research (SIAF), Davos Samuel B. Lehrer Professor, Clinical Immunology and Allergy, Tulane University School of Medicine, New Orleans, LA Bibliographic Indices. This publication is listed in bibliographic services, including Current Contents® and Index Medicus. Drug Dosage. The authors and the publisher have exerted every effort to ensure that drug selection and dosage set forth in this text are in accord with current recommendations and practice at the time of publication. However, in view of ongoing research, changes in government regulations, and the constant flow of information relating to drug therapy and drug reactions, the reader is urged to check the package insert for each drug for any change in indications and dosage and for added warnings and precautions. This is particularly important when the recommended agent is a new and/or infrequently employed drug. All rights reserved. No part of this publication may be translated into other languages, reproduced or utilized in any form or by any means electronic or mechanical, including photocopying, recording, microcopy- ing, or by any information storage and retrieval system, without permission in writing from the publisher. -
Downloads/ Nprg-Wood Boring Bark Beetles.Pdf
UC Riverside UC Riverside Electronic Theses and Dissertations Title Management of Canker and Dieback Diseases of Citrus and Sycamore in California Permalink https://escholarship.org/uc/item/5qx0n7v0 Author Mayorquin, Joey Sal Publication Date 2017 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California UNIVERSITY OF CALIFORNIA RIVERSIDE Management of Canker and Dieback Diseases of Citrus and Sycamore in California A Dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Plant Pathology by Joey Sal Mayorquin December 2017 Dissertation Committee: Dr. Akif Eskalen, Co-Chairperson Dr. M. Caroline Roper, Co-Chairperson Dr. Michael Stanghellini Copyright by Joey Sal Mayorquin 2017 The Dissertation of Joey Sal Mayorquin is approved: Committee Co-Chairperson Committee Co-Chairperson University of California, Riverside ACKNOWLEDGEMENTS Chapter I in its entirety is reprinted with permission as it appears in Mayorquin, J.S., Wang, D.H., Twizeyimana, M. and Eskalen, A. 2016. Identification, Distribution, and Pathogenicity of Diatrypaceae and Botryosphaeriaceae Associated with Citrus Branch Canker in the Southern California Desert. Plant Disease. 100(12), 2402-2413. Financial support for Chapters I and II was provided by the California Citrus Research Board (CRB), support for Chapter III was provided by the California Citrus Research Board (CRB) and Wonderful Citrus, and support for Chapter IV was provided by Orange County (OC) Parks and USDA National Institute of Food and Agriculture Hatch project (CA-R-PPA-5061-H). Citrus plants used in Chapter III were kindly donated by Wonderful Citrus. I would like to first thank my advisor, Dr.