Thermodynamics of Enzyme-Catalyzed Reactions: Part 2
Total Page:16
File Type:pdf, Size:1020Kb
Thermodynamics of Enzyme-Catalyzed Reactions: Part 2. Transferases Cite as: Journal of Physical and Chemical Reference Data 23, 547 (1994); https://doi.org/10.1063/1.555948 Submitted: 17 February 1994 . Published Online: 15 October 2009 Robert N. Goldberg, and Yadu B. Tewari ARTICLES YOU MAY BE INTERESTED IN Thermodynamics of Enzyme-Catalyzed Reactions: Part 1. Oxidoreductases Journal of Physical and Chemical Reference Data 22, 515 (1993); https:// doi.org/10.1063/1.555939 Thermodynamics of Enzyme-Catalyzed Reactions. Part 3. Hydrolases Journal of Physical and Chemical Reference Data 23, 1035 (1994); https:// doi.org/10.1063/1.555957 Thermodynamics of Enzyme-Catalyzed Reactions: Part 4. Lyases Journal of Physical and Chemical Reference Data 24, 1669 (1995); https:// doi.org/10.1063/1.555969 Journal of Physical and Chemical Reference Data 23, 547 (1994); https://doi.org/10.1063/1.555948 23, 547 © 1994 American Institute of Physics for the National Institute of Standards and Technology. Thermodynamics of Enzyme-Catalyzed Reactions: Part 2. Transferases Robert N. Goldberg and Yadu B. Tewari Biotechnology Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899 ReceivedPebruary 17, 1994; revised manuscript received Apri114, 1994 Equilibrium constants and enthalpy changes for reactions catalyzed by the transferase class of enzymes have been compiled. For each reaction the following information is given: the reference for the data; the reaction studied; the name of the enzyme used and its Enzyme Commission number; the method of measurement; the conditions of measurement [temperature, pH, ionic strength, and the buffer(s) and cofactor(s) used]; the data and an evaluation of it; and, sometimes, commentary on the data and on any corrections wHich have been applied to it or any calculations for which the data have been used. The data from 285 references have been examined and evaluated. Chemical Abstract Service registry numbers are given for the substances involved in these various reactions. There is a cross reference between the substances and the Enzyme Commission numbers of the enzymes used to cat,!lyze the reactions in which the substances participate. Key words: apparent equilibrium constants; chemical thermodynamics; enthalpies of reaction; enzyme C'::lt::llY7.ed re::lC'tinns; eV::lll1::lted data; transferases Contents -1. Introduction ................................ 549 (EC 2.1.3.5) .......................... 553 2. Some Aspects and Uses of Thermodynamic Data 5.11 Enzyme: glycine amidinotransferase for Biochemical Reactions ..................... 549 (EC 2.1.4.1) .......................... 554 3. Acknowledgments ........................... 550 5.12 Enzyme: transketolase (EC 2.2.1.1) ....... 554 4. References for the Introductory Discussion ....... 550 5.13 Enzyme: transaldolase (EC 2.2.1.2) ....... 554 5. Table of Equilibrium Constants and Enthalpies of 5.14 Enzyme: imidazole N -acetyltransferase Reaction ................................... 550 (EC2.3.1.2) ........................... 555 5.1 Enzyme: thetin-homocysteine 5.15 Enzyme: arylamine N -acetyltransferase S-methyltransferase (EC 2.1.1.3) .......... 550 (EC 2.3.1.5) .......................... 555 5.2 Enzyme: homocysteine S -methyltransferase 5.16 Enzyme: choline O-acetyltransferase (EC 2.1.1.10) .................... ~ .... 551 (EC 2.3.1.6) .......................... 556 5.3 Enzyme: thymidylate synthase 5.17 Enzyme: carnitine O-acetyltransferase (EC 2.1.1.45) ......................... 552 (EC 2.3.1.7) .......................... 557 5.4 Enzyme: glycine hydroxymethyltransferase 5.18 Enzyme: phosphate acetyltransferase (EC 2.1.2.1) .......................... 552 (Ee 2.3.1.8) .......................... 557 5.5 Enzyme: glycine formiminotransferase 5.19 Enzyme: acetyl-CoA C -acetyltransferase (EC 2.1.2.4) .......................... 552 (EC 2.3.1.9) ........................... 559 5.6 Enzyme: glutamate formiminotransferase 5.20 Enzyme: carnitine O-palmitoyltransfcrasc (EC 2.1.2.5) .......................... 552 (EC 2.3.1.21) ......................... 559 5.7 Enzyme: D-alanine 5.21 Enzyme: glutamate N -acetyltransferase 2-hydroxymethy ltransferase (EC 2.1.2.7) ... 553 (EC 2.3.1.35) ......................... 559 5.8 Enzyme: methylmalonyl-CoA 5.22 Enzyme: [acyl-carrier-protein] carboxyltransferase (EC 2.1.3.1) .......... 553 S -acetyltransferase (EC 2.3.1.38) ......... 560 5.9 Enzyme: ornithine carbamoyltransferase 5.23 Enzyme: [acyl-carrier-protein] (EC 2.1.3.3) .......................... 553 S-malonyltransferase (EC 2.3.1.39) ........ 560 5.10 Enzyme: oxamate carbamoyltransferase 5.24 Enzyme: formate C -acetyltransferase (EC 2.3.1.54) ......................... 560 5.25 Enzyme: sucrose phosphorylase ©1994 by the U. S. Secretary of Commerce on behalf of the United States. (EC 2.4.1.7) .......................... 560 This copyright is assigned to the American Institute of Physics and the American Chemital Society. 5.26 Enzyme: maltose phosphorylase Reprints available from ACS; see Reprints List at back of issue. (EC 2.4.1.8) .......................... 561 0047-2689/94/23(4)/547/71/$18.00 547 J. Phys. Chern. Ref. Data, Vol. 23, No.4, 1994 548 R. N. GOLDBERG AND Y. B. TEWARI 5.27 Enzyme: levansucrase (EC 2.4.1.10) ....... 561 transaminase (EC 2.6.1.33) .............. 573 5.28 Enzyme: sucrose synthase (EC 2.4.1.13) ... 561 5.58 Enzyme: glycine-oxaloacetate transaminase 5.29 Enzyme: sucrose-phosphate synthase (EC 2.6.1.35) ......................... 573 (EC 2.4.1.14) ..... ; ................... 562 5.59 Enzyme: 2-aminoadipate transaminase 5.30 Enzyme: a, a-trehalose-phosphate synthase (EC 2.6.1.39) ......................... 573 (UDP-forming) (EC 2.4.1.15) ............ 562 5.60 Enzyme: serine-pyruvate transaminase 5.31 Enzyme: cyclomaltodextrin (EC 2.6.1.51) ......................... 574 glucanotransferase (EC 2.4.1.19) .......... 562 5.61 Enzyme: phosphoserine transaminase 5.32 Enzyme: cellobiose phosphorylase (EC2.6.1.52) ......................... 574 (Ee 2.4.1.2U) ......................... 563 5.62 Enzyme: hexokinase (Ee 2.7.1.1) ......... 575 5.33 Enzyme: laminaribiose phosphorylase 5.63 Enzyme: galactokinase (EC 2.7.1.6) ....... 577 (EC 2.4.1.31) ......................... 563 5.64 Enzyme: 6-phosphofructokinase 5.34 Enzyme: a,a-trehalose phosphorylase (EC 2.7.1.11) ......................... 578 (EC 2.4.1.64) ......................... 563 5.65 Enzyme: NAD+ kinase (EC 2.7.1.23) ...... 578 5.35 Enzyme: galactinol-raffinose 5.66 Enzyme: dephospho-CoA kinase galactosyltransferase (EC 2.4.1.67) ........ 564 (EC 2.7.1.24) ......................... 578 5.36 Enzyme: sinapate l-glucosyltransferase 5.67 Enzyme: g1cerol kinase (EC 2.7.1.30) ...... 579 (EC 2.4.1.120) ........................ 564 5.68 Enzyme: protein kinase (EC 2.7.1.37) ..... 579 5.37 Enzyme: purine-nucleoside phosphorylase 5.69 Enzyme: pyruvate kinase (EC 2.7.1.40) .... 579 (EC 2.4.2.1) .................- ._........ 564 5.70 Enzyme: I-phosphatidylinositol kinase 5.38 Enzyme: pyrimidine-nucleoside (EC 2.7.1.67) ......................... 581 phosphorylase (EC 2.4.2.2) .............. 566 5.71 Enzyme: pyrophosphate-serine 5.39 Enzyme: uri dine phosphorylase phosphotransferase (Ee 2.7.1.80) ......... 581 (EC 2.4.2.3) .......................... 567 5.72 Enzyme: 5.40 Enzyme: nucleoside pyrophosphate-fructose-6-phosphate deoxyribosyltransferase (EC 2.4.2.6) ....... 567 I-phosphotransferase (EC 2.7.1.90) •....... 581 5.41 Enzyme: adenine phosphoribosyltransferase 5.73 Enzyme: acetate kinase (EC 2.7.2.1) ....... 581 (EC 2.4.2.7) .......................... 567 5.74 Enzyme: carbamate kinase (EC 2.7.2.2) .... 582 5.42 Enzyme: hypoxanthine 5.75 Enzyme: phosphoglycerate kinase phosphoribosyltransferase (Ee 2.4.2.8) ..... 567 (EC 2.7.2.3) ............ '.' ............ 582 5.43 Enzyme: orotate phosphoribosyltransferase 5.76 Enzyme: aspartate kinase (EC 2.7.2.4) ..... 584 (EC 2.4.2.10) ......................... 568 5.77 Enzyme: guanidinoacetate kinase 5.44 Enzyme: guanosine phosphorylase (EC 2.7.3.1) ....................... : .. 584 (EC 2.4.2.15) ......................... 568 5.78 Enzyme: creatine kinase (EC 2.7.3.2) ...... 584 5.45 Enzyme: thiamine pyridinylase 5.79 Enzyme: arginine kinase (EC 2.7.3.3) ...... 589 (EC 2.5.1.2) .......................... 569 5.80 Enzymc; taurocyaminc kinasc (BC 2.7.3.4) 590 5.46 Enzyme: thiamin-phosphate 5.81 Enzyme: lombricine kinase (EC 2.7.3.5) ... 591 pyrophosphorylase (EC 2.5.1.3) .......... 569 5.82 Enzyme: phosphomevalonate kinase 5.47 Enzyme: aspartate transaminase (EC 2.7.4.2) .......................... 591 (EC 2.6.1.1) .......................... 569 5.83 Enzyme: adenylate kinase (EC 2.7.4.3) .... ·591 5.48 Enzyme: alanine transaminase (EC 2.6.1.2) 570 5.84 Enzyme: nucleoside-phosphate kinase 5.49 Enzyme: histidinol-phosphate transaminase (EC 2.7.4.4) .......................... 599 (EC 2.6.1.9) .......................... 571 5.85 Enzyme: nucleoside-diphosphate kinase 5.50 Enzyme: ornithine-oxo-acid transaminase (EC 2.7.4.6) .......................... 599 (EC 2.6.1.13) ......................... 571 5.86 Enzyme; guanylate kinase (EC 2.7.4.8) .... 600 5.51 Enzyme: glutamine-pyruvate transaminase 5.87 Enzyme: nucleoside-triphosphate-adenylate (Ee 2.6.1.15) ......................... 571 kinase (EC 2.7.4.10) .................... 600 5.52 Enzyme: succinyldiaminopimelate 5.88 Enzyme: (deoxy )nucleoside-phosphate transaminase (EC 2.6.1.17) .............. 572 kinase (EC 2.7.4.13) .................... 600 5.53 Enzyme: ,B-alanine-pyruvate transaminase 5.89 Enzyme: cytidylate kinase