Hemerocallis
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Networks in a Large-Scale Phylogenetic Analysis: Reconstructing Evolutionary History of Asparagales (Lilianae) Based on Four Plastid Genes
Networks in a Large-Scale Phylogenetic Analysis: Reconstructing Evolutionary History of Asparagales (Lilianae) Based on Four Plastid Genes Shichao Chen1., Dong-Kap Kim2., Mark W. Chase3, Joo-Hwan Kim4* 1 College of Life Science and Technology, Tongji University, Shanghai, China, 2 Division of Forest Resource Conservation, Korea National Arboretum, Pocheon, Gyeonggi- do, Korea, 3 Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, United Kingdom, 4 Department of Life Science, Gachon University, Seongnam, Gyeonggi-do, Korea Abstract Phylogenetic analysis aims to produce a bifurcating tree, which disregards conflicting signals and displays only those that are present in a large proportion of the data. However, any character (or tree) conflict in a dataset allows the exploration of support for various evolutionary hypotheses. Although data-display network approaches exist, biologists cannot easily and routinely use them to compute rooted phylogenetic networks on real datasets containing hundreds of taxa. Here, we constructed an original neighbour-net for a large dataset of Asparagales to highlight the aspects of the resulting network that will be important for interpreting phylogeny. The analyses were largely conducted with new data collected for the same loci as in previous studies, but from different species accessions and greater sampling in many cases than in published analyses. The network tree summarised the majority data pattern in the characters of plastid sequences before tree building, which largely confirmed the currently recognised phylogenetic relationships. Most conflicting signals are at the base of each group along the Asparagales backbone, which helps us to establish the expectancy and advance our understanding of some difficult taxa relationships and their phylogeny. -
Botanická Zahrada.Indd
B-Ardent! Erasmus+ Project CZ PL LT D BOTANICAL GARDENS AS A PART OF EUROPEAN CULTURAL HERITAGE HEMEROCALLIS (DENIVKA, LILIOWIEC, VIENDIENĖ, TAGLILIE) Methodology 2020 Macháčková Markéta, Ehsen Björn, Gębala Małgorzata, Hermann Denise, Kącki Zygmunt, Rupp Hanne, Štukėnienė Gitana Institute of Botany CAS, Czech Republic University.of..Wrocław,.Poland Vilnius University, Lithuania Park.der.Gärten,.Germany B-Ardent! Botanical Gardens as a Part of European Cultural Heritage Project number 2018-1-CZ01-KA202-048171 We.thank.the.European.Union.for.supporting.this.project. B-Ardent! Erasmus+ Project CZ PL LT D The. European. Commission. support. for. the. production. of. this. publication. does. not. con- stitute.an.endorsement.of.the.contents.which.solely.refl.ect.the.views.of.the.authors..The. European.Commission.cannot.be.held.responsible.for.any.use.which.may.be.made.of.the. information.contained.therein. TABLE OF CONTENTS I. INTRODUCTION OF THE GENUS HEMEROCALLIS .............................................. 7 Botanical Description ............................................................................................... 7 Origin and Extension of the Genus Hemerocallis .................................................. 7 Taxonomy................................................................................................................... 7 History and Traditions of Growing Daylilies ...........................................................10 The History of the Daylily in Europe ........................................................................11 -
Racionální Rozšiřování Kolekcí V Rámci Národního Programu Rostlin
Rada genetických zdrojů rostlin Výzkumný ústav rostlinné výroby, v.v.i. Praha - Ruzyně Racionální rozšiřování kolekcí v rámci Národního programu rostlin VÚRV, v.v.i. Praha, 2016 Výzkumný ústav rostlinné výroby, v.v.i. Praha – Ruzyně Rada genetických zdrojů rostlin Sborník referátů ze seminářů Sběry krajových odrůd a planých příbuzných druhů v rámci Národního programu a jejich využití pořádaného 4. prosince 2014 Výzkumným ústavem Silva Taroucy pro krajinu a okrasné zahradnictví, v.v.i. v Průhonicích a Racionální rozšiřování kolekcí, potřeba nových materiálů, donorů žádoucích znaků, rozšiřování spektra kulturních druhů pořádaného 3. prosince 2015 AGRITEC, výzkum, šlechtění a služby, s.r.o. ve Velkých Losinách © Výzkumný ústav rostlinné výroby, v.v.i. Praha - Ruzyně „Genetické zdroje č.104“, VÚRV, v.v.i. Praha 2016 Editor: Ludmila Papoušková ISBN 978-80-7427-202-8 Obsah: Vzpomínka na Mgr.Ivu Faberovou………………………………………………......……………. 1 Dokoupil L., Řezníček V.: Pěstování a využití kdoulí……..………………………………………... 2 Hermuth J.: Čirok a bér – potenciál rostlin v rámci klimatických změn v České republice………… 10 Holubec V., Vymyslický T.: Sběry planých příbuzných druhů od roku 1990 po současnost………. 15 Knotová D., Pelikán J., Vícha D., Vymyslický T.: Rozšiřování spektra motýlokvětých pícnin……. 24 Lošák M., Ševčíková M., Chovančíková E.: Sběry planých populací trav a jejich význam pro rozšiřování kolekce genetických zdrojů………………………………………………………….. 30 Macháčková M., Caspers Z., Sekerka P.: Nová kolekce genofondu Hemerocallis…………………. 39 Nesvadba V., Ürgeová, E., Charvátová J., Štefanová L.: Variabilita planých chmelů a jejich využití ve šlechtění chmele …………………………………………………............................................. 47 Nesvadba Z., Hermuth J.: Kolekce genetických zdrojů tritikale ve VÚRV Praha – Ruzyně……….. 52 Papoušková L.: Současný stav dokumentace genetických zdrojů rostlin v České republice……….. -
Aizoales 3-663.20.00
Aizoales 3-663.20.00 Taxonomy Introduction In the Apg2 classifcation Te suborder is recognised with Lo- Tey have a tendency to give a lot in order to be accepted. Tey phiocarpaceae, Barbeuiaceae, Aizoaceae, Gisekiaceae, Nyctag- want to belong to the group, the family and in order to do so inaceae, Phytolaccaceae and Sarcobataceae. they have a tendency to adapt, to give in. Because they are high- ly sensitive they accurately feel what the others want and need Plant theory and can easily adapt to that. It is only when they feel placed In the Plant theory the above clade is given the name Aizoales. outside of the group that they can become angry. It feels like a Aizoales is placed in Phase 2 of the Caryophyllidae. basic need of life to be accepted but it is difcult for them to feel In the frst version the above Families were placed in the sever- completely accepted as their inner life is ofen felt as peculiar al Subphases. and strange. Tey feel weird in a strange world. Tey feel very In Plant theory 2 only Aizoaceae is lef inPhase 2. religious, a connection with the spiritual world and God and Te other Families are transferred toPhase 3. that connection is ofen not very well accepted in society. Due to their inner convictions they can get in confict with society. Subphases Mostly their solution is to keep their opinions and feelings to 1. Sesuvioideae Aizoaceae themselves; they prefer to avoid the conficts. Tey hope to be 2. Drosanthemoideae Aizoaceae be able to stay with their own inner convictions and that they 3. -
한국산 원추리속(Hemerocallis)의 분류학적 연구
Korean J. Pl. Taxon. ISSN 1225-8318 42(4): 294-306 (2012) Korean Journal of http://dx.doi.org/10.11110/kjpt.2012.42.4.294 Plant Taxonomy A taxonomic study of Hemerocallis (Liliaceae) in Korea Yong Hwang and Muyeol Kim* Department of Biological Sciences, Chonbuk National University, Jeonju 561-756, Korea (Received 29 May 2012; Revised 29 June 2012; Accepted 22 August 2012) 한국산 원추리속(Hemerocallis)의 분류학적 연구 황용·김무열* 전북대학교 자연과학대학 생명과학과 ABSTRACT: Taxonomic study of the genus Hemerocallis (Liliaceae) in Korea was conducted based on morpho- logical data. H. middendorffii was distinguished from its related taxon H. dumortieri by the trait of coriaceous long bract with green color. H. taeanensis was distinguished from its related taxon H. minor by its odorless flowers, longer perianth tube and leaf length. H. thunbergii was distinguished from its related taxon H. lilio- asphodelus by its long perianth tube. Lastly, H. hakuunensis was distinct from its related taxon H. hongdoensis as a result of its extreme branching of scape and short leaf width. From this study, it was revealed that H. minor, H. lilioasphodelus, and H. dumortieri were distributed only in the northern part of the Korean peninsular. Keywords: Hemerocallis, H. hongdoensis, H. taeanensis 적요: 한국산 원추리속(Hemerocallis) 9종 1품종에 대해 외부형태형질을 기초로 분류학적 연구를 수행하여 새로운 종 검색표를 작성하고 종의 한계를 재검토하였다. 큰원추리는 녹색 혁질의 긴 포를 가지고 있어 연녹 색 막질의 작은 포를 가진 각시원추리와 구별되었다. 태안원추리는 애기원추리와 유사하나 향기가 없고 화 피통부와 잎의 길이가 길어 구별되었다. 노랑원추리는 골잎원추리와 유사하나 화피통부가 길어 뚜렷이 구별 된다. 백운산원추리는 홍도원추리와 유사하나 화경이 깊게 분지하고 잎의 폭이 좁아 구별되었다. -
Leidinys Apie Viendienes
B-Ardent! Erasmus+ Project CZ • PL • LT • D BOTANIKOS SODAI KAIP DALIS EUROPOS KULTŪROS PAVELDO HEMEROCALLIS (DENIVKA, LILIOWIEC, VIENDIENĖ, TAGLILIE) Metodika 2020 Machačkova Marketa, Ehsen Bjorn, Gebala Malgorzata, Hermann Denise, Kacki Zygmunt, Rupp Hanne, Štukėnienė Gitana Botanikos institutas, CAS, Čekija Vroclavo Universitetas, Vroclavas, Lenkija Vilniaus Universitetas, Vilnius, Lietuva Sodų parkas, Bad Zwischenahn, Vokietija B-Ardent! Botanikos sodai kaip dalis Europos kultūros paveldo Projekto numeris 2018-1-CZ01-KA202-048171 Mes dėkojame Europos Sąjungai už paramą šiam projekui B-Ardent! Erasmus+ Project CZ • PL • LT • D Europos Komisija parėmė šį leidinį, kuriame atspindi tik autorių nuomonė. Europos Komisija negali būti laikoma atsakinga už leidinyje esančią informaciją. I. TURINYS II. ĮVADAS Į VIENDIENĖS GENTĮ ………….…………………………………………….…..7 III. Botaninis aprašymas………………………………….……………………..…..7 Viendienių genties kilmė ir paplitimas ........................................................................ 7 Taksonomija ..................................................................................................................... 7 Viendienių auginimo tradicijos ir istorija ..................................................................10 Viendienių istorija Europoje.........................................................................................11 Viendienių morfologija, biologija ir auginimo technologijos ...............................13 Viendienių selekcija .....................................................................................................13 -
Plant Materials for Vegetation Management Along NYS Roadsides
Plant Materials for Vegetation Management along New York State Roadsides Leslie A. Weston, Andrew F. Senesac, and Paul A. Weston Plant Materials for Vegetation Management along New York State Roadsides Table of Contents Foreword.........................................................................1 Integrated vegetation management.........................................2 Plant material selection guidelines..........................................3 Site preparation ................................................................4 Results of plant material evaluation ........................................6 Best performers for roadside plantings .....................................6 Plant material descriptions I. Broadleaf perennials ...................................................9 Key to layout of species descriptions ............................. 10 II. Grasses................................................................. 66 Key to layout of species descriptions ............................. 67 Additional information ...................................................... 88 Appendix 1. Measuring soil pH ........................................ 91 Appendix 2. Roadside functional zones.............................. 92 Appendix 3. NYS hardiness zones .................................... 93 Appendix 4. NYS precipitation map .................................. 94 Appendix 5. Synopsis of Experimental Results from Ithaca and Riverhead NY.......................................................... 95 Acknowledgments ........................................................... -
Recircumscription of Sections of Hemerocallis (Asphodelaceae) from Japan and Adjacent Regions Based on MIG-Seq Data
ISSN 1346-7565 Acta Phytotax. Geobot. 71 (1): 1–11 (2020) doi: 10.18942/apg.201913 Recircumscription of Sections of Hemerocallis (Asphodelaceae) from Japan and Adjacent Regions Based on MIG-seq Data 1,† 1,† 1 2 3 Sho MurakaMi , koji TakayaMa , Shizuka FuSe , Shun k. hiroTa , SaToShi koi , 4 5,‡ 1,* TakahiTo ideno , Takenori yaMaMoTo and Minoru n. TaMura 1Department of Botany, Graduate School of Science, Kyoto University, Kitashirakawa-oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan. *[email protected] (author for correspondence); 2Field Science Center, Graduate School of Agricultural Science, Tohoku University, 232-3 Aza-yomogida, Naruko Onsen, Osaki, Miyagi 989-6711, Japan; 3Botanical Gardens, Faculty of Science, Osaka City University, 2000 Kisaichi, Katano, Osaka 576-0004, Japan; 4Botanical Gardens, Graduate School of Science, the University of Tokyo, 3-7-1 Hakusan, Bunkyo-ku, Tokyo 112-0001, Japan; 5Tsushima City Hall, 1441 Kokubu, Izuhara-cho, Tsushima, Nagasaki 817-8510, Japan. ‡Present address: Iriomote Station, Tropical Biosphere Research Center, University of the Ryukyus, 870 Uehara, Taketomi- cho, Yaeyama-gun, Okinawa 907-1541, Japan. †These authors contributed equally to this work Circumscription of three sections of Hemerocallis that were recognized by Matsuoka & Hotta (Acta Phy- totax. Geobot. 22: 25–43, 1966) and Hotta (Fl. Jap. IVb: 130–134, 2016) was evaluated through MIG-seq analysis of 45 samples of seven species and nine varieties of Hemerocallis, covering all taxa native to Japan except H. fulva vars. aurantiaca and pauciflora. The Neighbor-Net network of the MIG-seq data yielded three major clusters corresponding to the three sections of Hemerocallis recognized by Matsuo- ka & Hotta (1966) and Hotta (2016), except that H. -
Klasifikátory Kosatců, Pivoněk a Denivek V Průhonické Botanické Zahradě
KLASIFIKÁTORY KOSATCŮ, PIVONĚK A DENIVEK V PRŮHONICKÉ BOTANICKÉ ZAHRADĚ Certifikovaná metodika DESCRIPTOR LISTS FOR IRISES, PEONIES AND DAYLILIES IN THE PRŮHONICE BOTANIC GARDEN Sekerka Pavel, Blažek Milan, Blažková Uljana, Caspers Zuzana, Macháčková Markéta, Fáberová Iva, Papoušková Ludmila, Matiska Pavel & Koudela Martin Klasifikátory kosatců, pivoněk a denivek v Průhonické botanické zahradě Sekerka Pavel1, Blažek M. 1, Blažková U. 1, Caspers Z. 1, Macháčková M. 1, Fáberová I.+ 2, Papoušková L. 2, Matiska P. 3, Koudela M. 3 1 Botanický ústav AV ČR, v.v.i., Zámek 1, 252 43 Průhonice 2 Výzkumný ústav rostlinné výroby, v.v.i., Drnovská 507, 161 06 Praha Ruzyně 3 Katedra zahradnictví, FAPPZ, Česká zemědělská univerzita v Praze, Kamýcká 129, 165 00 Praha 6 Autoři textu: Sekerka Pavel, Blažek Milan, Blažková Uljana, Caspers Zuzana, Macháčková Markéta, Fáberová Iva, Papoušková Ludmila, Matiska Pavel, Koudela Martin Kontakt na vedoucího autorského kolektivu: [email protected] Autoři fotografií: Sekerka Pavel, Macháčková Markéta, Caspers Zuzana Autoři kreseb: Sekerka Pavel, Sekerková Zuzana a archiv autorů. Korektura anglického textu: Skálová Hana Recenze: Severa Michal Grafická úprava a sazba: Pavel Sekerka Vydal: Botanický ústav AV ČR, v.v.i., Zámek 1, 252 43 Průhonice v roce 2019 Tisk: Nová tiskárna Pelhřimov spol. s r.o., Krasíkovická 1787, 393 01 Pelhřimov Počet stran: 155 Náklad: 700 ISBN: 978-80-86188-60-7 Certifikovaná metodika byla uznána Ministerstvem zemědělství v souladu s podmínkami Metodiky hodnocení výzkumných organizací a programů účelové podpory výzkumu, vývoje a inovací pod osvědčením č. 65065/2019-MZE-18133 ze dne 11.12. 2019. Příspěvek vznikl v rámci řešení Národního programu konzervace a vyžívání genetických zdrojů rostlin, zvířat a mikroorganismů významných pro výživu a zemědělství č.j. -
Molecular Phylogenetics and Evolution:Epub- Epub
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2021 Evolutionary history of Hemerocallis in Japan inferred from chloroplast and nuclear phylogenies and levels of interspecific gene flow Hirota, Shun K ; Yasumoto, Akiko A ; Nitta, Kozue ; Tagane, Misa ; Miki, Nozomu ; Suyama, Yoshihisa ; Yahara, Tetsukazu Abstract: The perennial herb genus Hemerocallis (Asphodelaceae) shows four flowering types: diurnal half-day, diurnal one-day, nocturnal half-day, and nocturnal one-day flowering. These flowering types are corresponding to their main pollinators, and probably act as a primary mechanism of reproductive isolation. To examine how the four flowering types diverged, we reconstructed the phylogeny of the Japanese species of Hemerocallis using 1615 loci of nuclear genome-wide SNPs and 2078 bp sequences of four cpDNA regions. We also examined interspecific gene flows among taxa by an Isolation-with- Migration model and a population structure analysis. Our study revealed an inconsistency between chloroplast and nuclear genome phylogenies, which may have resulted from chloroplast capture. Each of the following five clusters is monophyletic and clearly separated on the nuclear genome-wide phylogenetic tree: (I) two nocturnal flowering species with lemon-yellow flowers, H. citrina (half-day flowering) andH. lilioasphodelus (one-day flowering); (II) a diurnal one-day flowering species with yellow-orange flowers,H. middendorffii; (III) a variety of a diurnal half-day flowering species with reddish orange flowers, H.fulva var. disticha; (IV) another variety of a diurnal half-day flowering species with reddish orange flowers, H. fulva var. aurantiaca, and a diurnal one-day flowering species with yellow-orange flowers, H.