Functional Novelty Relaxes a Constraint Imposed by the Negro River, Amazon, Brazil
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Evolutionary History of Lake Tanganyika's Predatory Deepwater
Hindawi Publishing Corporation International Journal of Evolutionary Biology Volume 2012, Article ID 716209, 10 pages doi:10.1155/2012/716209 Research Article Evolutionary History of Lake Tanganyika’s Predatory Deepwater Cichlids Paul C. Kirchberger, Kristina M. Sefc, Christian Sturmbauer, and Stephan Koblmuller¨ Department of Zoology, Karl-Franzens-University Graz, Universitatsplatz¨ 2, 8010 Graz, Austria Correspondence should be addressed to Stephan Koblmuller,¨ [email protected] Received 22 December 2011; Accepted 5 March 2012 Academic Editor: R. Craig Albertson Copyright © 2012 Paul C. Kirchberger et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Hybridization among littoral cichlid species in Lake Tanganyika was inferred in several molecular phylogenetic studies. The phenomenon is generally attributed to the lake level-induced shoreline and habitat changes. These allow for allopatric divergence of geographically fragmented populations alternating with locally restricted secondary contact and introgression between incompletely isolated taxa. In contrast, the deepwater habitat is characterized by weak geographic structure and a high potential for gene flow, which may explain the lower species richness of deepwater than littoral lineages. For the same reason, divergent deepwater lineages should have evolved strong intrinsic reproductive isolation already in the incipient stages of diversification, and, consequently, hybridization among established lineages should have been less frequent than in littoral lineages. We test this hypothesis in the endemic Lake Tanganyika deepwater cichlid tribe Bathybatini by comparing phylogenetic trees of Hemibates and Bathybates species obtained with nuclear multilocus AFLP data with a phylogeny based on mitochondrial sequences. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Estuarine Fish Diversity of Tamil Nadu, India
Indian Journal of Geo Marine Sciences Vol. 46 (10), October 2017, pp. 1968-1985 Estuarine fish diversity of Tamil Nadu, India H.S. Mogalekar*, J. Canciyal#, P. Jawahar, D.S. Patadiya, C. Sudhan, P. Pavinkumar, Prateek, S. Santhoshkumar & A. Subburaj Department of Fisheries Biology and Resource Management, Fisheries College & Research Institute, (Tamil Nadu Fisheries University), Thoothukudi-628 008, India. #ICAR-National Academy of Agricultural Research Management, Rajendranagar, Hyderabad-500 030, Telangana, India. *[E-Mail: [email protected]] Received 04 February 2016 ; revised 10 August 2017 Systematic and updated checklist of estuarine fishes contains 330 species distributed under 205 genera, 95 families, 23 orders and two classes. The most diverse order was perciformes with 175 species, 100 genera and 43 families. The top four families with the highest number of species were gobidae (28 species), carangidae (23 species), engraulidae (15 species) and lutjanidae (14 species). Conservation status of all taxa includes one species as endangered, five species as vulnerable, 14 near threatened, 93 least concern and 16 data deficient. As numbers of commercial, sports, ornamental and cultivable fishes are high, commercial and recreational fishing could be organized. Seed production by selective breeding is recommended for aquaculture practices in estuarine areas of Tamil Nadu. [Keywords: Estuarine fishes, updated checklist, fishery and conservation status, Tamil Nadu] Introduction significant component of coastal ecosystem due to The total estuarine area of Tamil Nadu their immense biodiversity values in aquatic was estimated to be 56000 ha, which accounts ecology. The fish fauna inhabiting the estuarine 3.88 % of the total estuarine area of India 1. -
Fish, Various Invertebrates
Zambezi Basin Wetlands Volume II : Chapters 7 - 11 - Contents i Back to links page CONTENTS VOLUME II Technical Reviews Page CHAPTER 7 : FRESHWATER FISHES .............................. 393 7.1 Introduction .................................................................... 393 7.2 The origin and zoogeography of Zambezian fishes ....... 393 7.3 Ichthyological regions of the Zambezi .......................... 404 7.4 Threats to biodiversity ................................................... 416 7.5 Wetlands of special interest .......................................... 432 7.6 Conservation and future directions ............................... 440 7.7 References ..................................................................... 443 TABLE 7.2: The fishes of the Zambezi River system .............. 449 APPENDIX 7.1 : Zambezi Delta Survey .................................. 461 CHAPTER 8 : FRESHWATER MOLLUSCS ................... 487 8.1 Introduction ................................................................. 487 8.2 Literature review ......................................................... 488 8.3 The Zambezi River basin ............................................ 489 8.4 The Molluscan fauna .................................................. 491 8.5 Biogeography ............................................................... 508 8.6 Biomphalaria, Bulinis and Schistosomiasis ................ 515 8.7 Conservation ................................................................ 516 8.8 Further investigations ................................................. -
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CICHLIFORMES: Cichlidae (part 3) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 6.0 - 30 April 2021 Order CICHLIFORMES (part 3 of 8) Family CICHLIDAE Cichlids (part 3 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Haplochromis through Konia) Haplochromis Hilgendorf 1888 haplo-, simple, proposed as a subgenus of Chromis with unnotched teeth (i.e., flattened and obliquely truncated teeth of H. obliquidens); Chromis, a name dating to Aristotle, possibly derived from chroemo (to neigh), referring to a drum (Sciaenidae) and its ability to make noise, later expanded to embrace cichlids, damselfishes, dottybacks and wrasses (all perch-like fishes once thought to be related), then beginning to be used in the names of African cichlid genera following Chromis (now Oreochromis) mossambicus Peters 1852 Haplochromis acidens Greenwood 1967 acies, sharp edge or point; dens, teeth, referring to its sharp, needle-like teeth Haplochromis adolphifrederici (Boulenger 1914) in honor explorer Adolf Friederich (1873-1969), Duke of Mecklenburg, leader of the Deutsche Zentral-Afrika Expedition (1907-1908), during which type was collected Haplochromis aelocephalus Greenwood 1959 aiolos, shifting, changing, variable; cephalus, head, referring to wide range of variation in head shape Haplochromis aeneocolor Greenwood 1973 aeneus, brazen, referring to “brassy appearance” or coloration of adult males, a possible double entendre (per Erwin Schraml) referring to both “dull bronze” color exhibited by some specimens and to what -
Revista 2012Politecnica30(3).Pdf
ISSN: 1390-0129 ESCUELA POLITÉCNICA NACIONAL REVISTA POLITÉCNICA Volumen 30, número 3 Septiembre 2012 REVISTA POLITÉCNICA Volumen 30, número 3 Septiembre 2012 ISSN: 1390-0129 Rector EDITORES ASOCIADOS: Ing. Alfonso Espinosa R. Dra. Lucía Luna Museo de Zoología. Universidad de Michigan. U.S.A. Vicerrector Víctor Pacheco Ph.D. Museo de Historia Natural Universidad Ing. Adrián Peña I. Mayor San Marcos. Lima, Perú Stella de la Torre Ph.D. Colegio de Ciencias Biológicas y Ambientales. Universidad San Francisco Editor de Quito, Ecuador Dr. Luis Albuja V. Ana Lucia Balarezo A. Ph.D. Facultad de Ingenieria Civil y Ambiental, Escuela Politécnica Nacional. Quito, Delegado del Vicerrector, Ecuador Comisión de Investigación Alvaro Barragán MSc. Departamento de Entomología. y Extensión Universidad Cató1ica del Ecuador Prof. Dr. Eduardo Ávalos PUCE. Quito, Ecuador Christopher Canaday MSc. Conservation Biologist and EcoSan Promoter Saneamiento Ecológico. Coordinator of Guiding at the Omaere Ethmobotanical Park, Puyo. Pastaza, Ecuador COLABORACIÓN: Dr. Tjitte de Vries Departamento de Ciencias Biológicas, Sra. Eugenia Pinto M. Pontificia Universidad Cató1ica del Ecuador PUCE. Quito, Ecuador DISEÑO E IMPRESIÓN: Dimensión Alternativa / 2472382 John L. Carr Ph.D. Department of Biology. University of [email protected] Louisiana at Monroe, U.S.A. Dr. Marco Rada Programa de Pos-Graduado en Zoología. Esta es una publicación científico- Lab. de Sistemática de Vertebrados. técnica de la Escuela Politécnica Pontificia Universidad Cató1ica Do Río Nacional. Las ideas y doctrinas do Sul (PUCRS) Porto Alegre, Brasil expuestas en los diferentes artículos publicados son de estricta responsabi- Dra. Marisol Montellano B. División de Paleontología. Universidad lidad de sus autores. Autónoma de México UNAM, México DF. -
Indian and Madagascan Cichlids
FAMILY Cichlidae Bonaparte, 1835 - cichlids SUBFAMILY Etroplinae Kullander, 1998 - Indian and Madagascan cichlids [=Etroplinae H] GENUS Etroplus Cuvier, in Cuvier & Valenciennes, 1830 - cichlids [=Chaetolabrus, Microgaster] Species Etroplus canarensis Day, 1877 - Canara pearlspot Species Etroplus suratensis (Bloch, 1790) - green chromide [=caris, meleagris] GENUS Paretroplus Bleeker, 1868 - cichlids [=Lamena] Species Paretroplus dambabe Sparks, 2002 - dambabe cichlid Species Paretroplus damii Bleeker, 1868 - damba Species Paretroplus gymnopreopercularis Sparks, 2008 - Sparks' cichlid Species Paretroplus kieneri Arnoult, 1960 - kotsovato Species Paretroplus lamenabe Sparks, 2008 - big red cichlid Species Paretroplus loisellei Sparks & Schelly, 2011 - Loiselle's cichlid Species Paretroplus maculatus Kiener & Mauge, 1966 - damba mipentina Species Paretroplus maromandia Sparks & Reinthal, 1999 - maromandia cichlid Species Paretroplus menarambo Allgayer, 1996 - pinstripe damba Species Paretroplus nourissati (Allgayer, 1998) - lamena Species Paretroplus petiti Pellegrin, 1929 - kotso Species Paretroplus polyactis Bleeker, 1878 - Bleeker's paretroplus Species Paretroplus tsimoly Stiassny et al., 2001 - tsimoly cichlid GENUS Pseudetroplus Bleeker, in G, 1862 - cichlids Species Pseudetroplus maculatus (Bloch, 1795) - orange chromide [=coruchi] SUBFAMILY Ptychochrominae Sparks, 2004 - Malagasy cichlids [=Ptychochrominae S2002] GENUS Katria Stiassny & Sparks, 2006 - cichlids Species Katria katria (Reinthal & Stiassny, 1997) - Katria cichlid GENUS -
Critical Status Review on a Near Threatened Ornamental Gourami
International Journal of Fisheries and Aquatic Studies 2016; 4(5): 477-482 ISSN: 2347-5129 (ICV-Poland) Impact Value: 5.62 (GIF) Impact Factor: 0.549 Critical status review on a near threatened ornamental IJFAS 2016; 4(5): 477-482 © 2016 IJFAS gourami, Ctenops nobilis: A recapitulation for future www.fisheriesjournal.com preservation Received: 03-07-2016 Accepted: 04-08-2016 S Bhattacharya, BK Mahapatra and J Maity S Bhattacharya ICAR-Central Institute of Fisheries Education, Salt Lake Abstract City, Kolkata, India Fish keeping in aquarium which was started from the Roman Empire in 50AD now become a very popular hobby among the world. Small ornamental species are mostly preferable in aquarium industry. BK Mahapatra Gourami is one of the most valuable and popular in small ornamental fish world. In India presently 8 ICAR-Central Institute of indigenous Gourami species are very common and highly demanding. Ctenops nobilis is one of the Fisheries Education, Salt Lake highly demanding and important among the 8 indigenous Gourami species. It is the only known species City, Kolkata, India in its genus. The fish is mainly cold water species. The species is widely distributed but it is a naturally scarce species. As per IUCN Red list, 2010 status the species is assessed as Near Threatened for its J Maity Vidyasagar University, population declines in the wild. Very little data available of the fish resulting problems occur during Midnapore, West Bengal, India maintenance of the fish in aquarium. So the proper study on the fish, captive breeding and rearing procedure of the fish is very important to meet the increasing demand of the fish among aquarium hobbyist. -
Hered 347 Master..Hered 347 .. Page702
Heredity 80 (1998) 702–714 Received 3 June 1997 Phylogeny of African cichlid fishes as revealed by molecular markers WERNER E. MAYER*, HERBERT TICHY & JAN KLEIN Max-Planck-Institut f¨ur Biologie, Abteilung Immungenetik, Corrensstr. 42, D-72076 T¨ubingen, Germany The species flocks of cichlid fish in the three great East African Lakes, Victoria, Malawi, and Tanganyika, have arisen in each lake by explosive adaptive radiation. Various questions concerning their phylogeny have not yet been answered. In particular, the identity of the ancestral founder species and the monophyletic origin of the haplochromine cichlids from the East African lakes have not been established conclusively. In the present study, we used the anonymous nuclear DNA marker DXTU1 as a step towards answering these questions. A 280 bp-fragment of the DXTU1 locus was amplified by the polymerase chain reaction from East African lacustrine species, the East African riverine cichlid species Haplochromis bloyeti, H. burtoni and H. sparsidens, and other African cichlids. Sequencing revealed several indels and substitutions that were used as cladistically informative markers to support a phylogenetic tree constructed by the neighbor-joining method. The topology, although not supported by high bootstrap values, corresponds well to the geographical distribution and previous classifica- tion of the cichlids. Markers could be defined that: (i) differentiate East African from West African cichlids; (ii) distinguish the riverine and Lake Victoria/Malawi haplochromines from Lake Tanganyika cichlids; and (iii) indicate the existence of a monophyletic Lake Victoria cichlid superflock which includes haplochromines from satellite lakes and East African rivers. In order to resolve further the relationship of East African riverine and lacustrine species, mtDNA cytochrome b and control region segments were sequenced. -
Identification and Biology of Diplotaxodon, Rhamphochromis and Pallidochromis
190 Diplotaxodon, Rhamphochromis & Pallidochromis / Turner et al. Identification and Biology of Diplotaxodon, Rhamphochromis and Pallidochromis George F. Turner, Rosanna L. Robinson, Paul W. Shaw & Gary R. Carvalho Abstract Introduction We present preliminary morphological and mo- The genera Rhamphochromis Regan, 1922 and lecular taxonomic studies of the genera Rhampho- Diplotaxodon Trewavas, 1935 include the most chromis, Diplotaxodon and Pallidochromis, along with pelagic of Lake Malawi’s cichlids (Turner, 1996). notes on their identification, distribution and ecol- Pallidochromis Turner, 1994, a more benthic form, is ogy. We suggest that Rhamphochromis is comprised also considered in this chapter, as it appears mor- of eight to ten species: R. longiceps, R. woodi, R. phologically intermediate between Diplotaxodon macrophthalmus, R. esox, possibly R. ferox and four and Rhamphochromis (Turner 1994a). Rhampho- or five undescribed species. We suggest that R. chromis species are streamlined elongated predators lucius and R. brevis may be junior synonyms of R. of fish and zooplankton. They usually have large woodi. We also believe that Rhamphochromis teeth and jaws. Diplotaxodon comprises a heteroge- leptosoma and R. melanotus are junior synonyms of neous mix of small-toothed silvery species with R. esox. We consider that the two types of R. ferox upwardly-angled jaws. The genus includes zoo- are not conspecific and we designate a lectotype. planktivores and predators of small pelagic fish. However, we have not yet been able to positively The genus Rhamphochromis was described by identify this species from recent collections. Regan (1922), who took the type species as Diplotaxodon may contain anything from 11 to 22 or Rhamphochromis longiceps (Günther, 1864). -
Abstracts Part 1
375 Poster Session I, Event Center – The Snowbird Center, Friday 26 July 2019 Maria Sabando1, Yannis Papastamatiou1, Guillaume Rieucau2, Darcy Bradley3, Jennifer Caselle3 1Florida International University, Miami, FL, USA, 2Louisiana Universities Marine Consortium, Chauvin, LA, USA, 3University of California, Santa Barbara, Santa Barbara, CA, USA Reef Shark Behavioral Interactions are Habitat Specific Dominance hierarchies and competitive behaviors have been studied in several species of animals that includes mammals, birds, amphibians, and fish. Competition and distribution model predictions vary based on dominance hierarchies, but most assume differences in dominance are constant across habitats. More recent evidence suggests dominance and competitive advantages may vary based on habitat. We quantified dominance interactions between two species of sharks Carcharhinus amblyrhynchos and Carcharhinus melanopterus, across two different habitats, fore reef and back reef, at a remote Pacific atoll. We used Baited Remote Underwater Video (BRUV) to observe dominance behaviors and quantified the number of aggressive interactions or bites to the BRUVs from either species, both separately and in the presence of one another. Blacktip reef sharks were the most abundant species in either habitat, and there was significant negative correlation between their relative abundance, bites on BRUVs, and the number of grey reef sharks. Although this trend was found in both habitats, the decline in blacktip abundance with grey reef shark presence was far more pronounced in fore reef habitats. We show that the presence of one shark species may limit the feeding opportunities of another, but the extent of this relationship is habitat specific. Future competition models should consider habitat-specific dominance or competitive interactions.