Species Composition and Invasion Risks of Alien Ornamental Freshwater
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Comprehensive Phylogeny of Ray-Finned Fishes (Actinopterygii) Based on Transcriptomic and Genomic Data
Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data Lily C. Hughesa,b,1,2, Guillermo Ortía,b,1,2, Yu Huangc,d,1, Ying Sunc,e,1, Carole C. Baldwinb, Andrew W. Thompsona,b, Dahiana Arcilaa,b, Ricardo Betancur-R.b,f, Chenhong Lig, Leandro Beckerh, Nicolás Bellorah, Xiaomeng Zhaoc,d, Xiaofeng Lic,d, Min Wangc, Chao Fangd, Bing Xiec, Zhuocheng Zhoui, Hai Huangj, Songlin Chenk, Byrappa Venkateshl,2, and Qiong Shic,d,2 aDepartment of Biological Sciences, The George Washington University, Washington, DC 20052; bNational Museum of Natural History, Smithsonian Institution, Washington, DC 20560; cShenzhen Key Lab of Marine Genomics, Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals, Beijing Genomics Institute Academy of Marine Sciences, Beijing Genomics Institute Marine, Beijing Genomics Institute, 518083 Shenzhen, China; dBeijing Genomics Institute Education Center, University of Chinese Academy of Sciences, 518083 Shenzhen, China; eChina National GeneBank, Beijing Genomics Institute-Shenzhen, 518120 Shenzhen, China; fDepartment of Biology, University of Puerto Rico–Rio Piedras, San Juan 00931, Puerto Rico; gKey Laboratory of Exploration and Utilization of Aquatic Genetic Resources, Shanghai Ocean University, Ministry of Education, 201306 Shanghai, China; hLaboratorio de Ictiología y Acuicultura Experimental, Universidad Nacional del Comahue–CONICET, 8400 Bariloche, Argentina; iProfessional Committee of Native Aquatic Organisms and Water Ecosystem, China Fisheries Association, 100125 Beijing, China; jCollege of Life Science and Ecology, Hainan Tropical Ocean University, 572022 Sanya, China; kYellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 266071 Qingdao, China; and lComparative Genomics Laboratory, Institute of Molecular and Cell Biology, A*STAR, Biopolis, 138673 Singapore Edited by Scott V. -
Dissertação Final.Pdf
INSTITUTO NACIONAL DE PESQUISAS DA AMAZÔNIA – INPA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOLOGIA DE ÁGUA DOCE E PESCA INTERIOR - BADPI CARACTERIZAÇÃO CITOGENÉTICA EM ESPÉCIES DE Cichla BLOCH & SCHNEIDER, 1801 (PERCIFORMES, CICHLIDAE) COM ÊNFASE NOS HÍBRIDOS INTERESPECÍFICOS JANICE MACHADO DE QUADROS MANAUS-AM 2019 JANICE MACHADO DE QUADROS CARACTERIZAÇÃO CITOGENÉTICA EM ESPÉCIES DE Cichla BLOCH & SCHNEIDER, 1801 (PERCIFORMES, CICHLIDAE) COM ÊNFASE NOS HÍBRIDOS INTERESPECÍFICOS ORIENTADORA: Eliana Feldberg, Dra. COORIENTADOR: Efrem Jorge Gondim Ferreira, Dr. Dissertação apresentada ao Programa de Pós- Graduação do Instituto Nacional de Pesquisas da Amazônia como parte dos requisitos para obtenção do título de Mestre em CIÊNCIAS BIOLÓGICAS, área de concentração Biologia de Água Doce e Pesca Interior. MANAUS-AM 2019 Ficha Catalográfica Q1c Quadros, Janice Machado de CARACTERIZAÇÃO CITOGENÉTICA EM ESPÉCIES DE Cichla BLOCH & SCHNEIDER, 1801 (PERCIFORMES, CICHLIDAE) COM ÊNFASE NOS HÍBRIDOS INTERESPECÍFICOS / Janice Machado de Quadros; orientadora Eliana Feldberg; coorientadora Efrem Ferreira. -- Manaus:[s.l], 2019. 56 f. Dissertação (Mestrado - Programa de Pós Graduação em Biologia de Água Doce e Pesca Interior) -- Coordenação do Programa de Pós- Graduação, INPA, 2019. 1. Hibridação. 2. Tucunaré. 3. Heterocromatina. 4. FISH. 5. DNAr. I. Feldberg, Eliana, orient. II. Ferreira, Efrem, coorient. III. Título. CDD: 639.2 Sinopse: A fim de investigar a existência de híbridos entre espécies de Cichla, nós analisamos, por meio de técnicas de citogenética clássica e molecular indivíduos de C. monoculus, C. temensis, C. pinima, C. kelberi, C. piquiti, C. vazzoleri de diferentes locais da bacia amazônica e entre eles, três indivíduos foram considerados, morfologicamente, híbridos. Todos os indivíduos apresentaram 2n=48 cromossomos acrocêntricos. A heterocromatina foi encontrada preferencialmente em regiões centroméricas e terminais, com variações entre indivíduos de C. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Genomics and Mapping of Teleostei (Bony fish)
Comparative and Functional Genomics Comp Funct Genom 2003; 4: 182–193. Published online 1 April 2003 in Wiley InterScience (www.interscience.wiley.com). DOI: 10.1002/cfg.259 Featured Organism Genomics and mapping of Teleostei (bony fish) Melody S. Clark* HGMP Resource Centre, Genome Campus, Hinxton, Cambridge CB2 4PP, UK *Correspondence to: Abstract Melody S. Clark, HGMP Resource Centre, Genome Until recently, the Human Genome Project held centre stage in the press releases Campus, Hinxton, Cambridge concerning sequencing programmes. However, in October 2001, it was announced CB2 4PP, UK. that the Japanese puffer fish (Takifugu rubripes, Fugu) was the second vertebrate E-mail: [email protected] organism to be sequenced to draft quality. Briefly, the spotlight was on fish genomes. There are currently two other fish species undergoing intensive sequencing, the green spotted puffer fish (Tetraodon nigroviridis) and the zebrafish (Danio rerio). But this trio are, in many ways, atypical representations of the current state of fish genomic research. The aim of this brief review is to demonstrate the complexity of fish as a Received: 10 November 2002 group of vertebrates and to publicize the ‘lesser-known’ species, all of which have Revised: 5 December 2002 something to offer. Copyright 2003 John Wiley & Sons, Ltd. Accepted: 28 January 2003 Keywords: Teleostei; fish; genomics; BACs; sequencing; aquaculture Background the wild-caught fisheries production figures. The equivalents within the EU are trout, Atlantic Fish have the potential to be immensely useful salmon and sea bass/bream for aquaculture; model organisms in medical research, as evidenced with herring, mackerel and sprat for wild-caught by the genomic sequencing programmes mentioned fisheries. -
Global Patterns of Ranavirus Detections
NOTE Global patterns of ranavirus detections Jesse L. Brunnera*, Deanna H. Olsonb, Matthew J. Grayc, Debra L. Millerd, and Amanda L.J. Duffuse aSchool of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA; bUSDA Forest Service, Pacific Northwest Research Station, Corvallis, OR 97331-8550, USA; cDepartment of Forestry, Wildlife and Fisheries, University of Tennessee Institute of Agriculture, Knoxville, TN 37996-4563, USA; dCollege of Veterinary Medicine, University of Tennessee Institute of Agriculture, Knoxville, TN 37996-4563, USA; eDepartment of Natural Sciences, Gordon State College, Barnesville, GA 30204, USA *[email protected] Abstract Ranaviruses are emerging pathogens of poikilothermic vertebrates. In 2015 the Global Ranavirus Reporting System (GRRS) was established as a centralized, open access, online database for reports of the presence (and absence) of ranavirus around the globe. The GRRS has multiple data layers (e.g., location, date, host(s) species, and methods of detection) of use to those studying the epidemiol- ogy, ecology, and evolution of this group of viruses. Here we summarize the temporal, spatial, diag- nostic, and host-taxonomic patterns of ranavirus reports in the GRRS. The number, distribution, and host diversity of ranavirus reports have increased dramatically since the mid 1990s, presumably in response to increased interest in ranaviruses and the conservation of their hosts, and also the availability of molecular diagnostics. Yet there are clear geographic and taxonomic biases among the OPEN ACCESS reports. We encourage ranavirus researchers to add their studies to the portal because such collation can provide collaborative opportunities and unique insights to our developing knowledge of this For personal use only. -
Freshwater Ornamental Fish Commonly Cultured in Florida 1 Jeffrey E
Circular 54 Freshwater Ornamental Fish Commonly Cultured in Florida 1 Jeffrey E. Hill and Roy P.E. Yanong2 Introduction Unlike many traditional agriculture industries in Florida which may raise one or only a few different species, tropical Freshwater tropical ornamental fish culture is the largest fish farmers collectively culture hundreds of different component of aquaculture in the State of Florida and ac- species and varieties of fishes from numerous families and counts for approximately 95% of all ornamentals produced several geographic regions. There is much variation within in the US. There are about 200 Florida producers who and among fish groups with regard to acceptable water collectively raise over 800 varieties of freshwater fishes. In quality parameters, feeding and nutrition, and mode of 2003 alone, farm-gate value of Florida-raised tropical fish reproduction. Some farms specialize in one or a few fish was about US$47.2 million. Given the additional economic groups, while other farms produce a wide spectrum of effects of tropical fish trade such as support industries, aquatic livestock. wholesalers, retail pet stores, and aquarium product manufacturing, the importance to Florida is tremendous. Fish can be grouped in a number of different ways. One major division in the industry which has practical signifi- Florida’s tropical ornamental aquaculture industry is cance is that between egg-laying species and live-bearing concentrated in Hillsborough, Polk, and Miami-Dade species. The culture practices for each division are different, counties with additional farms throughout the southern requiring specialized knowledge and equipment to succeed. half of the state. Historic factors, warm climate, the proxim- ity to airports and other infrastructural considerations This publication briefly reviews the more common groups (ready access to aquaculture equipment, supplies, feed, etc.) of freshwater tropical ornamental fishes cultured in Florida are the major reasons for this distribution. -
Assessing CITES Non-Detriment Findings Procedures for Arapaima In
Journal of Applied Ichthyology J. Appl. Ichthyol. (2009), 1–8 Received: February 19, 2009 Ó 2009 The Authors Accepted: June 22, 2009 Journal compilation Ó 2009 Blackwell Verlag, Berlin doi:10.1111/j.1439-0426.2009.01355.x ISSN 0175–8659 Assessing CITES non-detriment findings procedures for Arapaima in Brazil By L. Castello1,2 and D. J. Stewart3 1The Woods Hole Research Center, Falmouth, MA, USA; 2The Mamiraua´ Institute for Sustainable Development, Tefe´, Amazonas, Brazil; 3Department of Environmental and Forest Biology, College of Environmental Science and Forestry, State University of New York, Syracuse, NY, USA Summary problems in making non-detrimental findings result mainly Arapaima are listed as endangered fishes according to the from lack of capacity and resources to implement monitoring Convention on International Trade of Endangered Species of schemes across the wide range of species in international Wild Fauna and Flora (CITES), thus their international trade trade.Õ Consequently, the CITES Secretariat has been seeking is regulated by non-detriment finding (NDF) procedures. The to improve existing NDF procedures: in 2008 an international authors critically assessed BrazilÕs regulations for NDF pro- workshop on the topic included a series of case studies cedures for Arapaima using IUCNÕs checklist for making covering various regions and taxa worldwide. The present NDFs, and found that those regulations cannot ensure the study was developed for that workshop, contributing to the sustainability of Arapaima populations. Arapaima are among implementation of more effective NDF procedures for tropical the largest fishes in the world, migrate short distances among fishes. several floodplain habitats, and are very vulnerable to fishing Tropical fishes are affected by the same broad range of during spawning. -
Helminth Parasites in Two Populations of Astronotus
Original article ISSN 1984-2961 (Electronic) www.cbpv.org.br/rbpv Braz. J. Vet. Parasitol., Jaboticabal, v. 28, n. 3, p. 425-431, july.-sept. 2019 Doi: https://doi.org/10.1590/S1984-29612019052 Helminth parasites in two populations of Astronotus ocellatus (Cichliformes: Cichlidae) from the eastern Amazon, Northern Brazil Helmintos parasitos em duas populações de Astronotus ocellatus (Cichliformes: Cichlidae) da Amazônia oriental, Norte do Brasil Raul Henrique da Silva Pinheiro1,2 ; Marcos Tavares-Dias3 ; Elane Guerreiro Giese1,2* 1 Programa de Pós-graduação em Biologia de Agentes Infecciosos e Parasitários, Instituto de Ciências Biológicas, Universidade Federal do Pará – UFPA, Belém, PA, Brasil 2 Laboratório de Histologia e Embriologia Animal, Instituto da Saúde e Produção Animal, Universidade Federal Rural da Amazônia – UFRA, Belém, PA, Brasil 3 Empresa Brasileira de Pesquisa Agropecuária – EMBRAPA, Macapá, AP, Brasil Received March 15, 2019 Accepted May 31, 2019 Abstract This study compared the structure of helminth parasite communities in two populations ofAstronotus ocellatus from two localities in Pará State, eastern Amazon (Brazil). Hosts from the Tapajós River were infected by Posthodiplostomum sp. metacercarie, larvae of Contracaecum sp. and Pseudoproleptus sp., with predominance of Contracaecum sp. Hosts from Iara Lake were infected by Procamallanus spiculastriatus, Proteocephalus sp. and Acanthocephala gen. sp., with predominance of P. spiculastriatus. Parasites had an aggregated dispersion and there were differences in Shannon diversity index and the evenness between both host populations, because the parasite component community showed no similarity. The existence of variation in infracommunity and community of parasites for A. ocellatus from different localities indicates the presence of an uneven distribution in terms of species and density of parasites, as well as of intermediate hosts in the localities surveyed. -
Low-Temperature Tolerances of Tropical Fish with Potential Transgenic Applications In
Canadian Journal of Zoology Low -temperature tolerances of tropical fish with potential transgenic applications in relation to winter water temperatures in Canada Journal: Canadian Journal of Zoology Manuscript ID cjz-2017-0043.R1 Manuscript Type: Article Date Submitted by the Author: 13-Jul-2017 Complete List of Authors: Leggatt, Rosalind; Department of Fisheries and Oceans, CAER Dhillion, Rashpal;Draft University of British Columbia, Zoology; University of Wisconsin Madison, Wisconsin Institute for Discovery - Epigenetics Mimeault, Caroline; Department of Fisheries and Oceans, Aquaculture, Biotechnology and Aquatic Animal Health Branch Johnson, Neville; Department of Fisheries and Oceans, Aquaculture, Biotechnology and Aquatic Animal Health Branch Richards, Jeffrey; University of British Columbia, Department of Zoology Devlin, Robert; Fisheries and Oceans Canada, ANIMAL IMPACT < Discipline, COLD HARDINESS < Discipline, GENETIC Keyword: ENGINEERING < Discipline, TEMPERATURE < Discipline, FRESHWATER < Habitat, TEMPERATE < Habitat, FISH < Taxon https://mc06.manuscriptcentral.com/cjz-pubs Page 1 of 35 Canadian Journal of Zoology 1 1 Low-temperature tolerances of tropical fish with potential transgenic applications in 2 relation to winter water temperatures in Canada 3 R.A. Leggatt, R.S. Dhillon, C. Mimeault, N. Johnson, J.G. Richards, R.H. Devlin 4 5 Corresponding author: R.A. Leggatt: Centre for Aquaculture and the Environment, Centre for 6 Biotechnology and Regulatory Research, Fisheries and Oceans Canada, 4160 Marine 7 Drive, West Vancouver, BC, V7V 1N6, Canada, Email: [email protected], 8 Tel: +1-604-666-7909, Fax: +1-604-666-3474 9 R.S. Dhillon 1: Department of Zoology, University of British Columbia, 4200-6270 University 10 Blvd. Vancouver, BC, V6T 1Z4, Canada, [email protected] 11 C. -
Oklahoma Aquatic Nuisance Species Management Plan
OKLAHOMA AQUATIC NUISANCE SPECIES MANAGEMENT PLAN Zebra Mussels White Perch Golden Alga Hydrilla TABLE OF CONTENTS Table of Contents……..................................................................................................... 3 Executive Summary......................................................................................................... 4 Introduction.......................................................................................................................6 Problem Definition..........................................................................................................10 Goals..............................................................................................................................23 Existing Authorities and Programs.................................................................................24 Objectives, Strategies, Actions & Cost Estimates..........................................................32 Objective 1: Coordinate and implement a comprehensive management plan..........32 Objective 2: Prevent the introduction of new ANS into Oklahoma............................35 Objective 3: Detect, monitor, and eradicate ANS......................................................38 Objective 4: Control & eradicate established ANS that have significant impacts…..40 Objective 5: Educate resource user groups..............................................................43 Objective 6: Conduct/support research.....................................................................45 -
(Colossoma Macropomum, Cuvier, 1818) Under Different Photoperiods
Revista Brasileira de Zootecnia © 2012 Sociedade Brasileira de Zootecnia ISSN 1806-9290 R. Bras. Zootec., v.41, n.6, p.1337-1341, 2012 www.sbz.org.br Morphometrical development of tambaqui (Colossoma macropomum, Cuvier, 1818) under different photoperiods Pedro Pierro Mendonça1*, Manuel Vazquez Vidal Junior2, Marcelo Fanttini Polese3, Monique Virães Barbosa dos Santos4, Fabrício Pereira Rezende5, Dalcio Ricardo de Andrade2 1 Doutorando em Ciência Animal - LZNA/CCTA/UENF. 2 LZNA/ CCTA/UENF, Campos dos Goytacazes, RJ, Brasil. 3 Mestrando em Ciência Animal - LZNA/CCTA/UENF. 4 Mestranda em Produção Animal - LZNA/CCTA/UENF. 5 Doutorando em Zootecnia/EMBRAPA Pesca e Aquicultura - Palmas, TO. ABSTRACT - The experiment was performed with 160 tambaqui (Colossoma macropomum) with average weight 11.01±2.08 g and total length 7.8±0.18 cm. Fishes were kept in sixteen aquariums with 56 L of water at 29.1±0.4 oC of temperature, initial stocking density 1.97 g/L and constant aeration. The objective of this study was to assess the influence of photoperiod on fish performance. Treatments consisted of four photoperiods: T1 = 6 hours; T2 = 12 hours; T3 = 18 hours and T4 = 24 hours, with four replicates each. Fishes were fed twice a day with commercial extruded feed (28% of crude protein). The experiment was developed in closed circulation system, with volume of water renewal for each experimental unit equivalent to 40 times daily. Fish biometry was performed at the beginning of the experiment and at every 16 days, in order to follow the effects of treatments on juvenile development. Final weight, total length, standard length, height, feed intake, weight gain, feed conversion, survival, specific growth rate, protein efficiency rate and protein retention efficiency were assessed. -
Fish Tales | in This Issue
Fish Tales | In this issue: 3 Presidents Message Greg Steeves 4 A Visit to the Michigan Cichlid Association Greg Steeves 10 DIY Pleco Caves Mike & Lisa Hufsteler Volume 6 Issue 3 13 Zebra Pleco added to The FOTAS Fish Tales is a quarterly publication of the Federation of Tex- as Aquarium Societies a non-profit organization. The views and opinions CITES List! contained within are not necessarily those of the editors and/or the of- Clay Trachtman ficers and members of the Federation of Texas Aquarium Societies. 14 Bettas in the Classroom FOTAS Fish Tales Editor: Gerald Griffin Gerald Griffin [email protected] 17 FOTAS CARES Fish Tales Submission Guidelines Greg Steeves Articles: Please submit all articles in electronic form. We can accept most popular 18 FOTAS 2016 Recap software formats and fonts. Email to [email protected]. Photos and Kyle Osterholt graphics are encouraged with your articles! Please remember to include the photo/graphic credits. Graphics and photo files may be submitted in 22 An Introduction to any format, however uncompressed TIFF, JPEG or vector format is pre- Apistos ferred, at the highest resolution/file size possible. If you need help with graphics files or your file is too large to email, please contact me for alter- David Soares native submission info. 26 Surviving the Dreaded Art Submission: Power Outage! Graphics and photo files may be submitted in any format. However, Gerald Griffin uncompressed TIFF, JPEG or vector formats are preferred. Please submit the 28 Going Wild with Bettas highest resolution possible. Gerald Griffin Next deadline…… January 15th 2017 35 Characodon, a Goodeid COPYRIGHT NOTICE that always surprises! All Rights Reserved.