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Chaetal Type Diversity Increases During Evolution of Eunicida (Annelida)
Org Divers Evol (2016) 16:105–119 DOI 10.1007/s13127-015-0257-z ORIGINAL ARTICLE Chaetal type diversity increases during evolution of Eunicida (Annelida) Ekin Tilic1 & Thomas Bartolomaeus1 & Greg W. Rouse2 Received: 21 August 2015 /Accepted: 30 November 2015 /Published online: 15 December 2015 # Gesellschaft für Biologische Systematik 2015 Abstract Annelid chaetae are a superior diagnostic character Keywords Chaetae . Molecular phylogeny . Eunicida . on species and supraspecific levels, because of their structural Systematics variety and taxon specificity. A certain chaetal type, once evolved, must be passed on to descendants, to become char- acteristic for supraspecific taxa. Therefore, one would expect Introduction that chaetal diversity increases within a monophyletic group and that additional chaetae types largely result from transfor- Chaetae in annelids have attracted the interest of scientist for a mation of plesiomorphic chaetae. In order to test these hypoth- very long time, making them one of the most studied, if not the eses and to explain potential losses of diversity, we take up a most studied structures of annelids. This is partly due to the systematic approach in this paper and investigate chaetation in significance of chaetal features when identifying annelids, Eunicida. As a backbone for our analysis, we used a three- since chaetal structure and arrangement are highly constant gene (COI, 16S, 18S) molecular phylogeny of the studied in species and supraspecific taxa. Aside from being a valuable eunicidan species. This phylogeny largely corresponds to pre- source for taxonomists, chaetae have also been the focus of vious assessments of the phylogeny of Eunicida. Presence or many studies in functional ecology (Merz and Edwards 1998; absence of chaetal types was coded for each species included Merz and Woodin 2000; Merz 2015; Pernet 2000; Woodin into the molecular analysis and transformations for these char- and Merz 1987). -
Biodiversity and Trophic Ecology of Hydrothermal Vent Fauna Associated with Tubeworm Assemblages on the Juan De Fuca Ridge
Biogeosciences, 15, 2629–2647, 2018 https://doi.org/10.5194/bg-15-2629-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Biodiversity and trophic ecology of hydrothermal vent fauna associated with tubeworm assemblages on the Juan de Fuca Ridge Yann Lelièvre1,2, Jozée Sarrazin1, Julien Marticorena1, Gauthier Schaal3, Thomas Day1, Pierre Legendre2, Stéphane Hourdez4,5, and Marjolaine Matabos1 1Ifremer, Centre de Bretagne, REM/EEP, Laboratoire Environnement Profond, 29280 Plouzané, France 2Département de sciences biologiques, Université de Montréal, C.P. 6128, succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada 3Laboratoire des Sciences de l’Environnement Marin (LEMAR), UMR 6539 9 CNRS/UBO/IRD/Ifremer, BP 70, 29280, Plouzané, France 4Sorbonne Université, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France 5CNRS, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France Correspondence: Yann Lelièvre ([email protected]) Received: 3 October 2017 – Discussion started: 12 October 2017 Revised: 29 March 2018 – Accepted: 7 April 2018 – Published: 4 May 2018 Abstract. Hydrothermal vent sites along the Juan de Fuca community structuring. Vent food webs did not appear to be Ridge in the north-east Pacific host dense populations of organised through predator–prey relationships. For example, Ridgeia piscesae tubeworms that promote habitat hetero- although trophic structure complexity increased with ecolog- geneity and local diversity. A detailed description of the ical successional stages, showing a higher number of preda- biodiversity and community structure is needed to help un- tors in the last stages, the food web structure itself did not derstand the ecological processes that underlie the distribu- change across assemblages. -
Status of Sea Turtles Listed Under
STATUS REVIEWS OF SEA TURTLES LISTED UNDER THE ENDANGERED SPECIES ACT OF 1973: Loggerhead Turtle, Caretta caretta East Pacific Green Turtle, Chelonia mydas Leatherback Turtle, Dermochelys coriacea Hawksbill Turtle, Eretmochelys imbricata Kemp's Ridley Turtle, Lepidochelys kempii Olive Ridley Turtle, Lepidochelys olivacea United States Department of Commerce National Oceanic and Atmospheric Administration National Marine Fisheries Service Silver Spring, Maryland United States Department of the Interior U.S. Fish and Wildlife Service Washington D.C. Literature citations should read as follows: Plotkin, P.T. (Editor). 1995. National Marine Fisheries Service and U. S. Fish and Wildlife Service Status Reviews for Sea Turtles Listed under the Endangered Species Act of 1973. National Marine Fisheries Service, Silver Spring, Maryland Pamela T. Plotkin, Ph.D., Editor, National Marine Fisheries Service, Office of Protected Species, 1315 East-West Highway, Silver Spring, MD 20910 Current Address: Pamela T. Plotkin, Ph.D. University of Delaware, Department of Entomology and Applied Ecology, 240 Townsend Hall, Newark, DE. Additional copies of this plan may be purchased from: U.S. Fish and Wildlife Reference Service 5430 Grosvenor Lane Suite 110 Bethesda, Maryland 20814 (301)492-6403 or 1-800-582-3421 The fee for the Status Review will vary depending on the current page charges. ii TABLE OF CONTENTS Table of Contents ......................................... iii Executive Summary ........................................ iv Loggerhead Sea Turtle ....................................... 1 East Pacific Green Sea Turtle ................................. 24 Leatherback Sea Turtle ...................................... 37 Hawksbill .............................................. 76 Kemp's Ridley Sea Turtle ................................... 109 Olive Ridley Sea Turtle .................................... 123 iii EXECUTIVE SUMMARY Introduction. Section 4 of the Endangered Species Act requires that National Marine Fisheries Service (NMFS) and the U.S. -
Annelida: Dorvilleidae) Associated with the Coral Lophelia Pertusa (Anthozoa: Caryophylliidae)
ARTICLE A new species of Ophryotrocha (Annelida: Dorvilleidae) associated with the coral Lophelia pertusa (Anthozoa: Caryophylliidae) Vinicius da Rocha Miranda¹²; Andrielle Raposo Rodrigues¹³ & Ana Claudia dos Santos Brasil¹⁴ ¹ Universidade Federal Rural do Rio de Janeiro (UFRRJ), Instituto de Ciências Biológicas e da Saúde (ICBS), Departamento de Biologia Animal, Laboratório de Polychaeta. Seropédica, RJ, Brasil. ² ORCID: http://orcid.org/0000-0002-4591-184X. E-mail: [email protected] (corresponding author) ³ ORCID: http://orcid.org/0000-0001-9152-355X. E-mail: [email protected] ⁴ ORCID: http://orcid.org/0000-0002-0611-9948. E-mail: [email protected] Abstract. Ophryotrocha is the most speciose genus within Dorvilleidae, with species occurring in a great variety of environments around the globe. In Brazil, records of Ophryotrocha are scarce and no specific identification is provided for any of the records. Herein we describe a new species of Dorvilleidae, Ophryotrocha zitae sp. nov. Adult and larval specimens were found in the axis of a fragment of the cold-water coral Lophelia pertusa, sampled off São Paulo’s coast, at a depth of 245 m. Both forms are described and illustrated. This new species resembles O. puerilis, O. adherens and O. eutrophila, but can be distinguished based on differences in its mandible and on chaetae shape and arrangement. Key-Words. Epibiont; Cold-water Coral; Deep-sea; Eunicida, Associated fauna. INTRODUCTION sette glands on the posterior region of the body (Ockelmann & Åkesson, 1990; Heggoy et al., 2007; The Family Dorvilleidae is comprised of 38 val‑ Paxton & Åkesson, 2011). These species also bear id genera, many of which are monospecific (Read, a complex buccal apparatus comprising a pair of 2016) and others, despite more specious, pres‑ mandibles and maxillae, the latter being either ent evident morphological homogeny (Rouse & “P‑type” or “K‑type”, and the presence of one or Pleijel, 2001). -
Annelida, Amphinomidae) in the Mediterranean Sea with an Updated Revision of the Alien Mediterranean Amphinomids
A peer-reviewed open-access journal ZooKeys 337: 19–33 (2013)On the occurrence of the firewormEurythoe complanata complex... 19 doi: 10.3897/zookeys.337.5811 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids Andrés Arias1, Rômulo Barroso2,3, Nuria Anadón1, Paulo C. Paiva4 1 Departamento de Biología de Organismos y Sistemas (Zoología), Universidad de Oviedo, Oviedo 33071, Spain 2 Pontifícia Universidade Católica do Rio de Janeiro , Rio de Janeiro, Brazil 3 Museu de Zoologia da Unicamp, Campinas, SP, Brazil 4 Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ) , Rio de Janeiro, RJ, Brasil Corresponding author: Andrés Arias ([email protected]) Academic editor: C. Glasby | Received 17 June 2013 | Accepted 19 September 2013 | Published 30 September 2013 Citation: Arias A, Barroso R, Anadón N, Paiva PC (2013) On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids. ZooKeys 337: 19–33. doi: 10.3897/zookeys.337.5811 Abstract The presence of two species within the Eurythoe complanata complex in the Mediterranean Sea is reported, as well as their geographical distributions. One species, Eurythoe laevisetis, occurs in the eastern and cen- tral Mediterranean, likely constituting the first historical introduction to the Mediterranean Sea and the other, Eurythoe complanata, in both eastern and Levantine basins. Brief notes on their taxonomy are also provided and their potential pathways for introduction to the Mediterranean are discussed. -
Eunicida and Amphinomida Polychaetes (Annelida) Inhabiting Dead Coral Fragments in the Chinchorro Bank Biosphere Reserve, Mexican Caribbean
Eunicida and Amphinomida polychaetes (Annelida) inhabiting dead coral fragments in the Chinchorro Bank Biosphere Reserve, Mexican Caribbean Pablo Hernández-Alcántara1, Ismael Narciso Cruz-Pérez2 & Vivianne Solís-Weiss3 1. Unidad Académica de Ecología y Biodiversidad Acuática, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México. Circuito Exterior S/N, Cd. Universitaria, Ciudad de México, 04510, México, [email protected] 2. Facultad de Estudios Superiores Zaragoza, Universidad Nacional Autónoma de México. Batalla 5 de mayo S/N esquina Fuerte de Loreto, Colonia Ejército de Oriente, C.P. 09230, Ciudad de México, México, [email protected] 3. Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México. Prol. Av. Niños Héroes s/n Puerto Morelos Quintana Roo, 77580, México, [email protected] Received 08-VII-2018. Corrected 20-V-2019. Accepted 30-VI-2019. ABSTRACT. Introduction: The polychaete fauna inhabiting Chinchorro Bank has been poorly studied and only 35 species have been previously reported. Objective: To examine the taxonomic composition of the Eunicida and Amphinomida associated to dead coral substrates from this coral reef atoll, a Biosphere Reserve located in the southern Mexican Caribbean. Methods: In April 2008, dead coral fragments of the genus Porites were manually collected by SCUBA diving at eight stations between 4-16.2 m depth. Results: A total of 714 individuals belonging to 17 genera and 48 species of the families Amphinomidae, Dorvilleidae, Eunicidae, Lumbrineridae, Oenonidae and Onuphidae were identified. Eunicidae was clearly the more diverse (29 species; 60.4 %) and abundant family (479 individuals; 67.1 %), while the Oenonidae and Onuphidae were represented by only one individual-species each. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
Culebra National Wildlife Refuge
Culebra National Wildlife Refuge Comprehensive Conservation Plan U.S. Department of the Interior Fish and Wildlife Service Southeast Region September 2012 COMPREHENSIVE CONSERVATION PLAN CULEBRA NATIONAL WILDLIFE REFUGE Culebra, Puerto Rico U.S. Department of the Interior Fish and Wildlife Service Southeast Region Atlanta, Georgia September 2012 Culebra National Wildlife Refuge TABLE OF CONTENTS COMPREHENSIVE CONSERVATION PLAN I. BACKGROUND ................................................................................................................................. 1 Introduction ...................................................................................................................................1 Purpose and Need for the Plan ....................................................................................................1 U.S. Fish and Wildlife Service ......................................................................................................2 National Wildlife Refuge System ..................................................................................................2 Legal and Policy Context ..............................................................................................................4 Legal Mandates, Administrative and Policy Guidelines, and Other Special Considerations .......................................................................................................4 National and International Conservation Plans and Initiatives .....................................................5 -
Endangered Species Act Biological Assessment and Essential Fish Habitat Evaluation Use of Oil Spill Dispersants and In-Situ
Endangered Species Act Biological Assessment And Essential Fish Habitat Evaluation Use of Oil Spill Dispersants And In-Situ Burning As Part of Response Actions Considered By the Caribbean Regional Response Team Prepared by: CRRT Response Technologies Committee October 2015 Biological Assessment and Essential Fish Habitat Evaluation Use of Oil Spill Dispersants and In-Situ Burning as Part of Response Actions Considered by the Caribbean Regional Response Team Table of Contents I. Description of Proposed Actions 1 A. Concurrence and Consultation Requirements under NCP Subpart J 1 B. CRRT Dispersant Preauthorization Agreements 2 C. Consensus Conditional Zones for Dispersant Consideration 3 D. CRRT Policy for the Use of In-Situ Burning 4 E. Description of Dispersants 5 F. Chemical Constituents in Dispersants 7 G. Toxicity of Dispersants 9 H. Toxicity of Chemically Dispersed Oil 10 I. Biodegradation of Dispersants and Dispersed Oil 12 J. Description of In-Situ Burning 16 II. Species and Habitat within the Action Area 18 A. Description of ESA-Listed Species Present 18 1. Sea Turtles 18 2. Marine Mammals 20 3. Fish 28 4. Corals 31 B. Essential Fish Habitat 35 1. Specific Areas that May be Affected by Oil Spill Response Operations 35 2. Life History of Spiny Lobster 37 3. Life History of Queen Conch 37 4. Life History of Corals 38 5. Life History of Reef Fish 40 III. Analysis of the Effects of the Proposed Actions 42 A. Potential Effects of Oil 42 1. Effects of Oil on Species 42 a. Sea Turtles 42 b. Marine Mammals (Cetaceans) 43 c. Fish 44 d. -
The Global Invertebrate Genomics Alliance
Journal of Heredity 2014:105(1):1–18 © The American Genetic Association 2013. All rights reserved. doi:10.1093/jhered/est084 For permissions, please e-mail: [email protected] The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Downloaded from https://academic.oup.com/jhered/article-abstract/105/1/1/858593 by University of Florida, Joseph Ryan on 28 May 2019 Diverse Invertebrate Genomes GIGA COMMUNiTY OF SciENTisTs* Address correspondence to Dr. Jose V. Lopez, Oceanographic Center, Nova Southeastern University, 8000 North Ocean Drive, Dania Beach, FL 33004, or e-mail: [email protected]. *Authors are listed in the Appendix Abstract Over 95% of all metazoan (animal) species comprise the “invertebrates,” but very few genomes from these organisms have been sequenced. We have, therefore, formed a “Global Invertebrate Genomics Alliance” (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a large taxonomic spectrum. We aim to promote standards that will facilitate comparative approaches to invertebrate genomics and collabora- tions across the international scientific community. Candidate study taxa include species from Porifera, Ctenophora, Cnidaria, Placozoa, Mollusca, Arthropoda, Echinodermata, Annelida, Bryozoa, and Platyhelminthes, among others. GIGA will target 7000 noninsect/nonnematode species, with an emphasis on marine taxa because of the unrivaled phyletic diversity in the oceans. Priorities for selecting invertebrates for sequencing will include, but are not restricted to, their phylogenetic placement; relevance to organismal, ecological, and conservation research; and their importance to fisheries and human health. -
Systematics, Evolution and Phylogeny of Annelida – a Morphological Perspective
Memoirs of Museum Victoria 71: 247–269 (2014) Published December 2014 ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/about/books-and-journals/journals/memoirs-of-museum-victoria/ Systematics, evolution and phylogeny of Annelida – a morphological perspective GÜNTER PURSCHKE1,*, CHRISTOPH BLEIDORN2 AND TORSTEN STRUCK3 1 Zoology and Developmental Biology, Department of Biology and Chemistry, University of Osnabrück, Barbarastr. 11, 49069 Osnabrück, Germany ([email protected]) 2 Molecular Evolution and Animal Systematics, University of Leipzig, Talstr. 33, 04103 Leipzig, Germany (bleidorn@ rz.uni-leipzig.de) 3 Zoological Research Museum Alexander König, Adenauerallee 160, 53113 Bonn, Germany (torsten.struck.zfmk@uni- bonn.de) * To whom correspondence and reprint requests should be addressed. Email: [email protected] Abstract Purschke, G., Bleidorn, C. and Struck, T. 2014. Systematics, evolution and phylogeny of Annelida – a morphological perspective . Memoirs of Museum Victoria 71: 247–269. Annelida, traditionally divided into Polychaeta and Clitellata, is an evolutionary ancient and ecologically important group today usually considered to be monophyletic. However, there is a long debate regarding the in-group relationships as well as the direction of evolutionary changes within the group. This debate is correlated to the extraordinary evolutionary diversity of this group. Although annelids may generally be characterised as organisms with multiple repetitions of identically organised segments and usually bearing certain other characters such as a collagenous cuticle, chitinous chaetae or nuchal organs, none of these are present in every subgroup. This is even true for the annelid key character, segmentation. The first morphology-based cladistic analyses of polychaetes showed Polychaeta and Clitellata as sister groups. -
AMPHINOMIDAE (ANNELIDA: POLYCHAETA) from ROCAS ATOLL, NORTHEASTERN BRAZIL 1 (With 3 Figures)
Arquivos do Museu Nacional, Rio de Janeiro, v.65, n.3, p.357-362, jul./set.2007 ISSN 0365-4508 AMPHINOMIDAE (ANNELIDA: POLYCHAETA) FROM ROCAS ATOLL, NORTHEASTERN BRAZIL 1 (With 3 figures) RÔMULO BARROSO 2, 3 PAULO CESAR PAIVA 3 ABSTRACT: Three amphinomid species from Rocas Atoll - Northeastern Brazil are reported. The re-description of Eurythoe complanata , Hermodice carunculata and the description of L inopherus cf. canariensis is provided. Key words: Amphinomidae. Eurythoe . Hermodice . Linopherus . Rocas Atoll. RESUMO: Amphinomidae (Annelida: Polychaeta) do Atol das Rocas, nordeste do Brasil. Três espécies de anfinomídeos do Atol das Rocas, nordeste do Brasil foram identificados. São apresentadas redescrições das espécies: Eurythoe complanata, Hermodice carunculata e a descrição de Linopherus cf. canariensis. Palavras-chave: Amphinomidae. Eurythoe . Hermodice . Linopherus . Atol das Rocas. INTRODUCTION They possess an eversible pharynx, bearing neither jaws, teeth, nor papillae. The family Amphinomidae was proposed by Branchiae may be present on some, or on all Lamarck in 1818. Within this family, 19 genera notopodia, although they are typically absent on the and 130 species have been recognized (K UDENOV , first setiger. Branchiae shape includes dendritic, 1995). The amphinomids are commonly found in bipinate or palmate forms. shallow tropical and subtropical water; however All chaetae are calcified, and the notosetae include specimens have also been reported in abyssal bifurcate and “harpoon” setae and neurosetae may depths and polar regions (K UDENOV , 1993). include curved hooks, bifurcated setae, smooth or Members within this family normally have spurred spines and capillaries. elongated body, more or less sub-rectangular in Amphinomids together with the other members of cross-section, less commonly depressed and sub- the Order Amphinomida are unusual, compared to elliptic in outline.