Supplemental Table 1.Predicted enzymes of S. oneidensis MR-1 and their closest homolog by Darwin analysis. The microbial genomes used for the comparion is listed at the end of this table.

Gene ID Gene Name Enzyme name/partial information genbankID;organism of best match Pam value of best match PMID of experimentally verified function

SO0003 trmE tRNA modification GTPase TrmE 26250447;Escherichia coli CFT073 31 SO0006 rnpA ribonuclease P protein component 50123362;Erwinia caratovora 63 SO0009 dnaN DNA polymerase III, beta subunit 24114989;Shigella flexneri 54 SO0010 recF DNA replication and repair protein RecF 28896787;Vibrio parahaemolyticus 80 SO0011 gyrB DNA gyrase, B subunit 9654406;Vibrio cholerae 31 SO0014 glyS glycyl-tRNA synthetase, beta subunit 50119046;Erwinia caratovora 38 SO0015 glyQ glycyl-tRNA synthetase, alpha subunit 50119045;Erwinia caratovora 17 SO0016 tag DNA-3-methyladenine glycosidase I 26250189;Escherichia coli CFT073 60 SO0017 none multimodular: protein with TolB and Tricorn protease domains (N-terminal); protein with metallo-dependent hydrolase domains 16124371;Caulobacter crescentus 91 SO0020 fadA fatty oxidation complex, beta subunit (2.3.1.16;3.1.2.4) 28896803;Vibrio parahaemolyticus 26 PMID:2191949 SO0021 fadB multimodular: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) (1.3.99.12;4.2.1.17) 9949116;Pseudomonas aeruginosa 42 PMID:3286611,15137080 SO0022 pepQ prolidase 15981680;Yersinia pestis 72 SO0023 none protein with NAD/FAD-binding domain 12721882;Pasteurella multocida 80 SO0025 none protoporphyrinogen oxidase 12721884;Pasteurella multocida 80 SO0027 none protoporphyrinogen oxidase, putative 15981677;Yersinia pestis 94 SO0030 sun 16S rRNA m5C967 methyltransferase 9654437;Vibrio cholerae 66 SO0031 fmt methionyl-tRNA formyltransferase 9654438;Vibrio cholerae 39 SO0032 def-1 polypeptide deformylase 34499720;Chromobacterium violaceum 46 SO0034 none DNA processing protein DprA, putative 28867415;Pseudomonas syringae 75 SO0036 none topoisomerase DNA-binding C4 zinc finger domain protein 9654444;Vibrio cholerae 71 SO0038 hemF coproporphyrinogen III oxidase, aerobic 16420991;Salmonella typhimurium 31 SO0040 aroE shikimate 5-dehydrogenase 9945845;Pseudomonas aeruginosa 64 SO0042 none carbonic anhydrase, family 3 28899805;Vibrio parahaemolyticus 38 SO0047 none carboxyl-terminal protease, putative 51246408;Desulfotalea psychrophila 90 SO0048 none peptidase, M23/M37 family 15978176;Yersinia pestis 93 SO0049 gpmA phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (5.4.2.1) 15978177;Yersinia pestis 39 PMID:10437801 SO0050 none rhodanese domain protein 9657246;Vibrio cholerae 80 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) 28899606;Vibrio parahaemolyticus 31 SO0054 none oxidoreductase with NAD(P)binding Rossmann-fold and FAD/NAD(P)-binding domains 28896853;Vibrio parahaemolyticus 50 SO0065 mog molybdenum cofactor biosynthesis protein Mog 34557568;Wolinella succinogenes 26 SO0066 none conserved hypothetical protein 15980562;Yersinia pestis 108 SO0067 none multimodular: transglycosylase (N-terminal); transpeptidase (C-terminal) 12720919;Pasteurella multocida 97 SO0071 none hydrolase, alpha/beta hydrolase fold family 37519622;Gloeobacter violaceus 122 SO0075 none AMP-binding family protein 15978630;Yersinia pestis 63 SO0077 none protein with with thioesterase/thiol ester dehydrase-isomerase domain 45358130;Methanococcus maripaludis 87 SO0079 none protein with Acyl-CoA N-acyltransferase domain 19553760;Corynebacterium glutamicum 117 SO0080 none protein with thioesterase/thiol ester dehydrase-isomerase domain 9656475;Vibrio cholerae 49 SO0083 none carboxymuconolactone decarboxylase family protein (4.1.1.44) 27379688;Bradyrhizobium japonicum 45 SO0084 none hydrolase, haloacid dehalogenase-like family 28869251;Pseudomonas syringae 83 SO0092 deoD-1 purine nucleoside phosphorylase 9657436;Vibrio cholerae 54 SO0095 hutI imidazolonepropionase (3.5.2.7) 9655684;Vibrio cholerae 53 PMID:2858467 SO0097 hutU urocanate hydratase (4.2.1.49) 28898048;Vibrio parahaemolyticus 17 PMID:4899017 SO0098 hutH histidine ammonia-lyase (4.3.1.3) 9655681;Vibrio cholerae 29 PMID:4899017 SO0098.1 none formate dehydrogenase-N, nitrate-inducible, alpha subunit 12720659;Pasteurella multocida 56 SO0101 fdnG formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing (1.2.1.2) 3868719;Escherichia coli K12 48 PMID:2168848 SO0102 fdnH formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (1.2.1.2) 1572950;Haemophilus influenzae 63 PMID:2168848 SO0103 fdnI formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (1.2.1.2) 1572950;Shigella flexneri 89 PMID:2168848

SO0105 selA L-seryl-tRNA selenium transferase 16762626;Salmonella enterica 63 SO0123 none acyltransferase family protein 34498663;Chromobacterium violaceum 98 SO0130 none protease, putative 9657617;Vibrio cholerae 97 SO0131 none chorismate pyruvate lyase 12721237;Pasteurella multocida 114 SO0134 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 51245141;Desulfotalea psychrophila 72 SO0135 none hemolysin protein, putative 0 SO0137 moeB molybdopterin biosynthesis MoeB protein 9658030;Vibrio cholerae 49 SO0138 moeA molybdopterin biosynthesis MoeA protein 50121760;Erwinia caratovora 70 SO0142 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 9658505;Vibrio cholerae 30 SO0144 ptrB protease II 9106503;Xylella fastidiosa 73 SO0145 none protein with GIY-YIG endonuclease domain 50119670;Erwinia caratovora 78 SO0151 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9948503;Pseudomonas aeruginosa 123 SO0152 none protein with Zn-dependent exopeptidase domain 16124566;Caulobacter crescentus 86 SO0162 pckA phosphoenolpyruvate carboxykinase 9951497;Pseudomonas aeruginosa 41 SO0177 none hydrolase, haloacid dehalogenase-like family 15978246;Yersinia pestis 71 SO0180 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 0 SO0183 none acetyltransferase, GNAT family 13473742;Mesorhizobium loti 94 SO0188 none protein with quinoprotein amine dehydrogenase domain 37521410;Gloeobacter violaceus 115 SO0190 none nudix hydrolase (MutT/nudix family) 9657319;Vibrio cholerae 46 SO0191 cysQ-1 cysQ protein 9657320;Vibrio cholerae 55 SO0192 none acetyltransferase, GNAT family 34496363;Chromobacterium violaceum 88 SO0194 none acyltransferase family protein 28897711;Vibrio parahaemolyticus 72 SO0195 ybbB selenophosphate-dependent tRNA 2-selenouridine synthase 28868022;Pseudomonas syringae 78 SO0196 selD selenide, water dikinase 1573160;Haemophilus influenzae 40 SO0197 none fatty acid desaturase, family 1 6321383;Saccharomyces cerevisiae 85 SO0206 trmA tRNA (uracil-5-)-methyltransferase 28899713;Vibrio parahaemolyticus 40 SO0213 murB UDP-N-acetylenolpyruvoylglucosamine reductase 1573234;Haemophilus influenzae 76 SO0215 panK pantothenate kinase 12722163;Pasteurella multocida 50 SO0224 rpoB DNA-directed RNA polymerase, beta subunit 9654742;Vibrio cholerae 22 SO0225 rpoC DNA-directed RNA polymerase, beta' subunit 26250759;Escherichia coli CFT073 20 SO0207 murI glutamate racemase 28899710;Vibrio parahaemolyticus 62 SO0256 rpoA DNA-directed RNA polymerase, alpha subunit 12721765;Pasteurella multocida 13 SO0259 ccmE cytochrome c biogenesis protein CcmE 9656598;Vibrio cholerae 49 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF 30248772;Nitrosomonas europaea 65 SO0267 dsbE thiol:disulfide interchange protein DsbE 50120818;Erwinia caratovora 77 SO0274 ppc phosphoenolpyruvate carboxylase (4.1.1.31;1.1.1.38) 28899535;Vibrio parahaemolyticus 57 PMID:6368527 SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase 9657235;Vibrio cholerae 59 SO0276 argB acetylglutamate kinase 9657234;Vibrio cholerae 75 SO0277 argF ornithine carbamoyltransferase 3257134;Pyrococcus horikoshii 78 SO0278 argG argininosuccinate synthase 28899531;Vibrio parahaemolyticus 28 SO0279 argH argininosuccinate lyase 9657232;Vibrio cholerae 41 SO0280 mrcA multimodular penicillin-binding protein 1a: transglycosylase (N-terminal); transpeptidase (C-terminal) 9657226;Vibrio cholerae 65 SO0286 aroK shikimate kinase 9657219;Vibrio cholerae 19 SO0287 aroB 3-dehydroquinate synthase 9657218;Vibrio cholerae 41 SO0289 dam DNA adenine methylase 28899516;Vibrio parahaemolyticus 48 SO0292 rpe ribulose-phosphate 3-epimerase (5.1.3.1) 16422041;Salmonella typhimurium 14 PMID:7603433 SO0293 gph phosphoglycolate phosphatase 9657214;Vibrio cholerae 79 SO0294 trpS tryptophanyl-tRNA synthetase 15978262;Yersinia pestis 29 SO0298 gmhA phosphoheptose isomerase 9950658;Pseudomonas aeruginosa 36 SO0301 none protein with cobalt precorrin-4 methyltransferase domain 28897224;Vibrio parahaemolyticus 41 SO0314 speF ornithine decarboxylase, inducible 9658508;Vibrio cholerae 17 SO0325 none dsrE-related protein 26247544;Escherichia coli CFT073 52 SO0332 none protein with protein kinase-like (PK-like) domain 9654428;Vibrio cholerae 58 SO0333 dsbA thiol:disulfide interchange protein DsbA 28899828;Vibrio parahaemolyticus 96 SO0340 ilvE branched-chain amino acid aminotransferase (2.6.1.42) 14246322;Staphylococcus aureus 91 PMID:3069843 SO0343 acnA 2-methylcitrate dehydratase, Fe-S dependent (4.2.1.79;4.2.1.3) 33593359;Bordetella pertussis 19 PMID:14702315 SO0344 prpC methylcitrate synthase (2.3.3.5) 28869488;Pseudomonas syringae 32 PMID:9579066 SO0345 prpB methylisocitrate lyase (4.1.3.30) 7225654;Neisseria meningitidis 39 PMID:12473114 SO0347 none acyltransferase family protein 28899829;Vibrio parahaemolyticus 77 SO0348 none acyltransferase family protein 9946322;Pseudomonas aeruginosa 62 SO0349 none magnesium chelatase family protein 12721896;Pasteurella multocida 55 SO0355 none AMP-binding protein 28899199;Vibrio parahaemolyticus 73 SO0357 none metallo-beta-lactamase superfamily protein 9655231;Vibrio cholerae 74 SO0359 spoT bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis pyrophosphate 3'- pyrophosphohydrolase 26250297;Escherichia coli CFT073 35 SO0360 rpoZ DNA-directed RNA polymerase, omega subunit 26250296;Escherichia coli CFT073 34 SO0361 gmk guanylate kinase 16762570;Salmonella enterica 34 SO0363 none protein with nucleotide-diphospho-sugar transferase domain 34540022;Porphyromonas gingivalis 117 SO0364 none protein with protein kinase-like (PK-like) domain 18310182;Clostridium perfringens 112 SO0368 none helicase 39996461;Geobacter sulfurreducens 93 SO0372 none hydrolase, haloacid dehalogenase-like family 9658020;Vibrio cholerae 42 SO0377 none protein with Class I glutamine amidotransferase-like domain 0 SO0379 none conserved hypothetical protein 18309785;Clostridium perfringens 102 SO0380 hsdR-1 type I restriction-modification system, R subunit 17988794;Brucella melitensis 97 SO0382 hsdS-1 type I restriction-modification system, S subunit 2648839;Archaeoglobus fulgidus 109 SO0383 hsdM-1 type I restriction-modification system, M subunit 42525032;Bdellovibrio bacteriovorus 70 SO0394 none tRNA-dihydrouridine synthase 9654702;Vibrio cholerae 41 SO0395 prmA ribosomal protein L11 methyltransferase 12517886;Escherichia coli O157:H7 EDL933 43 SO0398 frdA fumarate reductase flavoprotein subunit (1.3.99.1) 34557227;Wolinella succinogenes 48 SO0399 frdB fumarate reductase iron-sulfur protein (1.3.99.1) 34557226;Wolinella succinogenes 62 SO0401 none alcohol dehydrogenase, zinc-containing 28867982;Pseudomonas syringae 45 SO0407 none ATP-dependent RNA helicase, DEAD box family 28899776;Vibrio parahaemolyticus 35 SO0408 gppA guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 9654716;Vibrio cholerae 85 SO0410 mutT 7,8-dihydro-8-oxoguanine-triphosphatase 28897242;Vibrio parahaemolyticus 74 SO0413 none dephospho-CoA kinase 28899301;Vibrio parahaemolyticus 62 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme 9657001;Vibrio cholerae 66 SO0420.2 none hypothetical nicotinate-nucleotide pyrophosphorylase 0 SO0421 ampD N-acetyl-anhydromuramyl-L-alanine amidase 16759143;Salmonella enterica 54 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (1.2.4.1) 9656988;Vibrio cholerae 39 PMID:6343085 SO0425 aceF multimodular pyruvate dehydrogenase E2 compnent: biotin/lipoyl-binding protein (N- terminal); lipoate/dihyrolipoamide acetyltransferase (C-terminal) (2.3.1.12) 15981345;Yersinia pestis 40 PMID:6345153 SO0426 lpdA pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (1.8.1.4) 26246056;Escherichia coli CFT073 15 PMID:2211531 SO0428 none protein with FabD/lysophospholipase-like domain 28899270;Vibrio parahaemolyticus 106 SO0429 none peptidase, M13 family 34497442;Chromobacterium violaceum 77 SO0431 none hydrolase, haloacid dehalogenase-like family 16419840;Salmonella typhimurium 84 SO0432 acnB aconitate hydratase 2 (4.2.1.99;4.2.1.3) 28899269;Vibrio parahaemolyticus 21 PMID:12473114 SO0435 hemE uroporphyrinogen decarboxylase 26250768;Escherichia coli CFT073 22 SO0438 none oxidoreductase, short chain dehydrogenase/reductase family 17130765;Nostoc sp. PCC 7120 78 SO0441 purD phosphoribosylamine--glycine ligase 9654685;Vibrio cholerae 31 SO0442 purH multimodular: IMP cyclohydrolase (N-terminal); phosphoribosylaminoimidazolecarboxamide formyltransferase (C-terminal) 28899670;Vibrio parahaemolyticus 16 SO0453 fkbP-1 peptidyl-prolyl cis-trans isomerase FkbP 9949883;Pseudomonas aeruginosa 21 SO0459 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 21231989;Xanthomonas campestris 42 SO0464 none MutT/nudix family protein 16803661;Listeria monocytogenes 122 SO0467 uvrD DNA helicase II 26250553;Escherichia coli CFT073 35 SO0468 ubiA 4-hydroxybenzoate octaprenyltransferase 9654492;Vibrio cholerae 60 SO0471 none protein with inosine monophosphate dehydrogenase (IMPDH) domain 28870150;Pseudomonas syringae 67 SO0478 ccmF-2 cytochrome c-type biogenesis protein CcmF 30248772;Nitrosomonas europaea 91 SO0481 none peptidyl-prolyl cis-trans isomerase, FKBP-type 34540502;Porphyromonas gingivalis 75 SO0483 nrfC formate-dependent nitrite reductase, nrfC protein 34556813;Wolinella succinogenes 65 SO0484 nrfD formate-dependent nitrite reductase, nrfD protein 34556814;Wolinella succinogenes 66 SO0491 none peptidase, M13 family 21233100;Xanthomonas campestris 69 SO0497 none protein with protein kinase-like (PK-like) domain 0 SO0504 fre NAD(P)H-flavin reductase 28899769;Vibrio parahaemolyticus 77 SO0506 none 3-octaprenyl-4-hydroxybenzoate decarboxylase 16762156;Salmonella enterica 28 SO0508.1 none hypothetical Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 0 SO0510 none oxidoreductase, short-chain dehydrogenase/reductase family 28899413;Vibrio parahaemolyticus 55 SO0512 aroQ 3-dehydroquinate dehydratase, type II 28899653;Vibrio parahaemolyticus 28 SO0526 none acetyltransferase, GNAT family 9657151;Vibrio cholerae 64 SO0533 none arsenate reductase, putative 9948308;Pseudomonas aeruginosa 76 SO0538 gapA-1 glyceraldehyde 3-phosphate dehydrogenase (1.2.1.12) 9655536;Vibrio cholerae 35 PMID:775311 SO0541 none metallo-beta-lactamase family protein 21673433;Chlorobaculum tepidum 75 SO0558 smtA S-adenosylmethionine-dependent methyltransferase 26246948;Escherichia coli CFT073 88 SO0560 fhs formate--tetrahydrofolate ligase (6.3.4.3) 9658026;Vibrio cholerae 56 PMID:14645277 SO0567 plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase 26249589;Escherichia coli CFT073 77 SO0572 none enoyl-CoA hydratase/isomerase family protein 39934834;Rhodopseudomonas palustris 103 SO0575 hepA RNA polymerase-associated protein HepA 9657088;Vibrio cholerae 54 SO0578 none protein with metalloprotease domains 16127587;Caulobacter crescentus 114 SO0582 tpm thiopurine S-methyltransferase 9655707;Vibrio cholerae 86 SO0585 none D-isomer specific 2-hydroxyacid dehydrogenase family protein 9654677;Vibrio cholerae 86 SO0587 none glycerophosphoryl diester phosphodiesterase, putative 51244187;Desulfotalea psychrophila 96 SO0588.4 none hypothetical phosphatidylserine decarboxylase 0 SO0591 none guanine nucleotidase 15978463;Yersinia pestis 55 SO0592 orn oligoribonuclease 15978464;Yersinia pestis 37 SO0598 yjeF yjeF protein 29654395;Coxiella burnetii 85 SO0599 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 28872060;Pseudomonas syringae 44 SO0600 amiB N-acetylmuramoyl-L-alanine amidase 16763177;Salmonella enterica 69 SO0601 mutL DNA mismatch repair protein MutL 16763178;Salmonella enterica 37 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase 9654762;Vibrio cholerae 35 SO0604 hflX GTP-binding protein HflX 15978472;Yersinia pestis 43 SO0613 pabA para-aminobenzoate synthase glutamine amidotransferase, component II 9657208;Vibrio cholerae 33 SO0614 none dipeptidyl peptidase IV, putative 21233438;Xanthomonas campestris 104 SO0616 none esterase, putative 9948111;Pseudomonas aeruginosa 110 SO0617 argD acetylornithine aminotransferase 28899571;Vibrio parahaemolyticus 37 SO0618 astA arginine N-succinyltransferase 9657206;Vibrio cholerae 67 SO0619 astD succinylglutamic semialdehyde dehydrogenase 34496954;Chromobacterium violaceum 54 SO0632 hrpB ATP-dependent helicase HrpB 28871855;Pseudomonas syringae 86 SO0633 mrcB multimodular penicilling-binding protein 1b: membrane protein (N-terminal); glycosyl transferase (Middle); transpeptidase (C-terminal) 9655034;Vibrio cholerae 69 SO0635 ppiC-1 peptidyl-prolyl cis-trans isomerase C 9658391;Vibrio cholerae 30 SO0636 none acetyltransferase, GNAT family 9657885;Vibrio cholerae 6 SO0639 none Collagenase family 21224251;Streptomyces coelicolor 107 SO0640 none alcohol dehydrogenase, zinc-containing 15979690;Yersinia pestis 73 SO0690 none type II DNA modification methyltransferase, putative 34497566;Chromobacterium violaceum 44 SO0693 galM aldose 1-epimerase 50120327;Erwinia caratovora 96 SO0694 galK galactokinase 9656105;Vibrio cholerae 85 SO0696 dsbD multimodular: thiol:disulfide interchange protein (N-terminal); protein with thioredoxin- like domain (C-terminal) 28899639;Vibrio parahaemolyticus 80 SO0715 sorA oxidoreductase, molybdopterin-binding 6967510;Campylobacter jejuni 74 SO0725 katG-1 catalase/peroxidase HPI 15981249;Yersinia pestis 41 SO0740 none melanin biosynthesis protein TyrA, putative 9656697;Vibrio cholerae 83

SO0741 ggt-1 gamma-glutamyltranspeptidase 21232751;Xanthomonas campestris 41 SO0747 fpr ferredoxin--NADP reductase 26250690;Escherichia coli CFT073 95 SO0749 none protein with phosphoglycerate mutase-like domain 16124731;Caulobacter crescentus 105 SO0750 none glutamate synthase, putative 30250059;Nitrosomonas europaea 65 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive 26246720;Escherichia coli CFT073 29 SO0762 none isochorismatase family protein 28898761;Vibrio parahaemolyticus 98 SO0768 none protein with NAD(P)-binding Rossmann-fold domain 9658499;Vibrio cholerae 53 SO0770 mdh malate dehydrogenase (1.1.1.37) 28897099;Vibrio parahaemolyticus 23 PMID:3322223 SO0772 none folate reductase 26247853;Escherichia coli CFT073 64 SO0774 none 5-formyltetrahydrofolate cyclo-ligase family protein 26249328;Escherichia coli CFT073 64 SO0777 ubiH 2-octaprenyl-6-methoxyphenol hydroxylase 50119409;Erwinia caratovora 83 SO0778 none oxidoreductase, FAD-binding, UbiH/Coq6 family 15978979;Yersinia pestis 63 SO0779 gcvT glycine cleavage system T protein 26249320;Escherichia coli CFT073 40 SO0781 gcvP glycine cleavage system P protein 16421604;Salmonella typhimurium 37 SO0783 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 16421315;Salmonella typhimurium 59 SO0789 none dehydrogenase 34496570;Chromobacterium violaceum 78 SO0801 none hydrolase 16762402;Salmonella enterica 54 SO0806 none alkaline phosphatase, putative 28898036;Vibrio parahaemolyticus 70 SO0810 rbsK ribokinase 9657519;Vibrio cholerae 72 SO0811 none inosine-uridine preferring nucleoside hydrolase family protein 24112050;Shigella flexneri 34 SO0818 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 50119141;Erwinia caratovora 57 SO0823 none peptidase, subfamily M50B usnassigned peptidases 9657958;Vibrio cholerae 44 SO0828 none RNA methyltransferase 1572956;Haemophilus influenzae 103 SO0830 none alkaline phosphatase 2632887;Bacillus subtilis 83 SO0831 gshB glutathione synthetase 28899385;Vibrio parahaemolyticus 34 SO0833 endA endonuclease I 9654896;Vibrio cholerae 44 SO0835 none protein with pyrrolidone carboxyl peptidase domain 21220861;Streptomyces coelicolor 101 SO0837 none beta-lactamase, carbapenem-hydrolyzing Ambler class D 27380471;Bradyrhizobium japonicum 83 SO0840_1 none multimodulear acetylCoA carboxylase: alpha subunit (N-terminal); beta subunit (Middle); biotin carboxylase (Middle); biotin carboxyl carrier protein (C-terminal) 15159691;Agrobacterium tumefaciens 114 SO0840_3 none multimodulear acetylCoA carboxylase: alpha subunit (N-terminal); beta subunit (Middle); biotin carboxylase (Middle); biotin carboxyl carrier protein (C-terminal) 29377343;Enterococcus faecalis 87 SO0840_4 none multimodulear acetylCoA carboxylase: alpha subunit (N-terminal); beta subunit (Middle); biotin carboxylase (Middle); biotin carboxyl carrier protein (C-terminal) 2983771;Aquifex aeolicus 101 SO0848 napA periplasmic nitrate reductase 9658095;Vibrio cholerae 32 SO0849 napD napD protein 50120827;Erwinia caratovora 108 SO0862 serA D-3-phosphoglycerate dehydrogenase 28899367;Vibrio parahaemolyticus 34 SO0867 none serine protease, subtilase family 2636375;Bacillus subtilis 112 SO0869 panC pantoate--beta-alanine ligase 28868180;Pseudomonas syringae 58 SO0870 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase 9655023;Vibrio cholerae 42 SO0871 folK-1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 28899279;Vibrio parahaemolyticus 60 SO0872 pcnB polyA polymerase 26246087;Escherichia coli CFT073 54 SO0873 none glutamyl-tRNA synthetase domain protein 26246088;Escherichia coli CFT073 63 SO0876 pepB peptidase B 28897377;Vibrio parahaemolyticus 74 SO0878 prkB phosphoribulokinase 9657202;Vibrio cholerae 30 SO0880 none hydrolase with alpha/beta-hydrolase domain 50122980;Erwinia caratovora 84 SO0882 none oxidoreductase, GMC family 34497944;Chromobacterium violaceum 76 SO0888 none amidase family protein 9950371;Pseudomonas aeruginosa 18 SO0897 dbpA ATP-dependent RNA helicase DbpA 28897062;Vibrio parahaemolyticus 43 SO0899 none glyoxalase family protein 34499769;Chromobacterium violaceum 42 SO0900 none oxidoreductase, aldo/keto reductase family 9655105;Vibrio cholerae 48 SO0902 nqrA-1 NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit 15981176;Yersinia pestis 55 SO0903 nqrB-1 NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB 7225795;Neisseria meningitidis 61 SO0904 nqrC-1 NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit 1573124;Haemophilus influenzae 103 SO0907 nqrF-1 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit 9656854;Vibrio cholerae 28 SO0914 none peptidase, family S12 unassigned peptidases 23100815;Oceanobacillus iheyensis 117

SO0918 aac aculeacin A acylase 28869364;Pseudomonas syringae 120 SO0920 none acetyltransferase, GNAT family 20093987;Methanopyrus kandleri 121 SO0929 metK S-adenosylmethionine synthetase 26249363;Escherichia coli CFT073 15 SO0930 tkt transketolase (2.2.1.1) 9654899;Vibrio cholerae 29 PMID:8241274 SO0931 epd D-erythrose 4-phosphate dehydrogenase 16761852;Salmonella enterica 43 SO0932 pgk phosphoglycerate kinase (2.7.2.5;2.7.2.3) 50122833;Erwinia caratovora 29 PMID:2545537 SO0933 fba fructose-bisphosphate aldolase (4.1.2.13) 34495642;Chromobacterium violaceum 22 PMID:9531482 SO0944 none protein with ribokinase-like domain 2984285;Aquifex aeolicus 124 SO0947 srmB ATP-dependent RNA helicase SrmB 12516997;Escherichia coli O157:H7 EDL933 59 SO0948 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 28897280;Vibrio parahaemolyticus 95 SO0951 dsbC thiol:disulfide interchange protein DsbC 12517419;Escherichia coli O157:H7 EDL933 68 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ 9949891;Pseudomonas aeruginosa 51 SO0954 none acetyltransferase, GNAT family 28898775;Vibrio parahaemolyticus 56 SO0956 ahpF alkyl hydroperoxide reductase, F subunit 9945970;Pseudomonas aeruginosa 44 SO0958 ahpC alkyl hydroperoxide reductase, C subunit 28870281;Pseudomonas syringae 36 SO0959 pepA-1 cytosol aminopeptidase 16125229;Caulobacter crescentus 74 SO0964 none hydrolase with alpha/beta-hydrolase domain 0 SO0967 none dienelactone hydrolase family protein 6320117;Saccharomyces cerevisiae 102 SO0968 ldhA D-lactate dehydrogenase (1.1.1.28) 7226939;Neisseria meningitidis 44 SO0970 none multimodular: fumarate reductase 19703402;Fusobacterium nucleatum 73 PMID:12872312 SO0978 none FAD-dependent glycerol-3-phosphate dehydrogenase family protein (1.1.99.5) 30248387;Nitrosomonas europaea 92 1987111 SO0980 none RNA methyltransferase, TrmA family 9658366;Vibrio cholerae 56 SO0988_1 none multimodular: oxidoreductase with FAD/NAD(P)-binding and ferredoxin-like domains (N- terminal); protein with dehydrogenase/reductase-like and ACD-like domains (C-terminal) 5458370;Pyrococcus abyssi 100 SO0988_2 none multimodular: oxidoreductase with FAD/NAD(P)-binding and ferredoxin-like domains (N- terminal); protein with dehydrogenase/reductase-like and ACD-like domains (C-terminal) 51244333;Desulfotalea psychrophila 80 SO0992 lysS lysyl-tRNA synthetase 9655101;Vibrio cholerae 20 SO0999 pbpG D-alanyl-D-alanine endopeptidase 9658302;Vibrio cholerae 24 SO1006 none dienelactone hydrolase family protein 13363356;Escherichia coli O157:H7 67 SO1009 nuoN NADH dehydrogenase I, N subunit 16761241;Salmonella enterica 48 SO1010 nuoM NADH dehydrogenase I, M subunit 50121940;Erwinia caratovora 35 SO1011 nuoL NADH dehydrogenase I, L subunit 28870539;Pseudomonas syringae 32 SO1012 nuoK NADH dehydrogenase I, K subunit 15980537;Yersinia pestis 27 SO1013 nuoJ NADH dehydrogenase I, J subunit 9948714;Pseudomonas aeruginosa 41 SO1014 nuoI NADH dehydrogenase I, I subunit 26248668;Escherichia coli CFT073 17 SO1016 nuoG NADH dehydrogenase I, G subunit 9948711;Pseudomonas aeruginosa 45 SO1017 nuoF NADH dehydrogenase I, F subunit 9948709;Pseudomonas aeruginosa 15 SO1018 nuoE NADH dehydrogenase I, E subunit 9948708;Pseudomonas aeruginosa 17 SO1019 nuoCD NADH dehydrogenase I, C/D subunits 9948707;Pseudomonas aeruginosa 26 SO1020 nuoB NADH dehydrogenase I, B subunit 9948706;Pseudomonas aeruginosa 23 SO1021 nuoA NADH dehydrogenase I, A subunit 16761253;Salmonella enterica 35 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase 50122907;Erwinia caratovora 41 SO1031 none alpha-ribazole-5'-phosphate phosphatase, putative 28868922;Pseudomonas syringae 107 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 9655719;Vibrio cholerae 58 SO1036 cobS cobalamin 5'-phosphate synthase 9655720;Vibrio cholerae 82 SO1037 cobU bifunctional: cobinamide kinase; cobinamide phosphate guanylyltransferase 21232490;Xanthomonas campestris 64 SO1038 cobQ cobyric acid synthase CobQ 9947211;Pseudomonas aeruginosa 45 SO1039 cobO cob(I)alamin adenosyltransferase 9655504;Vibrio cholerae 39 SO1049 none acetyltransferase, GNAT family 21220361;Streptomyces coelicolor 113 SO1051 none periplasmic glucan biosynthesis protein, putative 21233567;Xanthomonas campestris 52 SO1053 none protein with posphoenolpyruvate/pyruvate domain 21224469;Streptomyces coelicolor 100 SO1059 none aminopeptidase N 2791507;Mannheimia succiniciproducens 111 SO1062 def-2 polypeptide deformylase 17131097;Nostoc sp. PCC 7120 82 SO1065 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase FkpA 29348385;Bacteroides thetaiotaomicron 55 SO1066 none extracellular nuclease 28899573;Vibrio parahaemolyticus 73 SO1068 none protein with thioesterase/thiol ester dehydrase-isomerase domain 21674141;Chlorobaculum tepidum 69 SO1070 katB catalase 12720234;Pasteurella multocida 54 SO1072 none chitin-binding protein, putative 9658238;Vibrio cholerae 85 SO1075 none dipeptidyl-peptidase 7, family S46 9106978;Xylella fastidiosa 85 SO1090 none ApbE family protein, putative 17545330;Ralstonia solanacearum 117 SO1095 none O-acetylhomoserine (thiol)-lyase, putative 50119763;Erwinia caratovora 15 SO1097 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 15978681;Yersinia pestis 91 SO1103 nqrA-2 NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit 1573122;Haemophilus influenzae 45 SO1104 nqrB-2 NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB 9656858;Vibrio cholerae 39 SO1105 nqrC-2 NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit 9656857;Vibrio cholerae 63 SO1108 nqrF-2 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit 9656854;Vibrio cholerae 16 SO1109 apbE thiamin biosynthesis lipoprotein ApbE 15981170;Yersinia pestis 69 SO1114 dinP DNA-damage-inducible protein P 50122391;Erwinia caratovora 44 SO1115 pepD aminoacyl-histidine dipeptidase 28897445;Vibrio parahaemolyticus 50 SO1117 none cytosol aminopeptidase, putative 2984306;Aquifex aeolicus 118 SO1121 proB glutamate 5-kinase 9656837;Vibrio cholerae 45 SO1122 proA gamma-glutamyl phosphate reductase 28897451;Vibrio parahaemolyticus 56 SO1136 none ATP-dependent RNA helicase, DEAD box family 9658432;Vibrio cholerae 61 SO1139 fklB peptidyl-prolyl cis-trans isomerase FklB 9657154;Vibrio cholerae 48 SO1140 dapB dihydrodipicolinate reductase 26245952;Escherichia coli CFT073 43 SO1141 carA carbamoyl-phosphate synthase, small subunit 28897244;Vibrio parahaemolyticus 25 SO1142 carB carbamoyl-phosphate synthase, large subunit 9656961;Vibrio cholerae 16 SO1149 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9655847;Vibrio cholerae 51 SO1150 rpiA ribose 5-phosphate isomerase (5.3.1.6) 9657059;Vibrio cholerae 22 PMID:8366047 SO1153 none exonuclease, putative 34540197;Porphyromonas gingivalis 122 SO1160 rimI ribosomal-protein-alanine acetyltransferase 28377585;Lactobacillus plantarum 100 SO1161 lipA lipoic acid synthetase 28897490;Vibrio parahaemolyticus 28 SO1162 lipB lipoate-protein ligase B 1786848;Escherichia coli K12 37 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase 9655406;Vibrio cholerae 34 SO1166 none membrane-bound lytic transglycosylase, putative 28871938;Pseudomonas syringae 69 SO1168 mrdA penicillin-binding protein 2 28897496;Vibrio parahaemolyticus 65 SO1171 nad nucleotidylyl transferase 2635010;Bacillus subtilis 103 SO1172 holA DNA polymerase III, delta subunit 16759605;Salmonella enterica 108 SO1174 leuS leucyl-tRNA synthetase 9655415;Vibrio cholerae 28 SO1177 cutE apolipoprotein N-acyltransferase 9655417;Vibrio cholerae 74 SO1181 miaB conserved hypothetical protein 16759622;Salmonella enterica 23 SO1183 none 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase 28897509;Vibrio parahaemolyticus 68 SO1184 pth peptidyl-tRNA hydrolase 50121111;Erwinia caratovora 34 SO1185 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9656740;Vibrio cholerae 23 SO1196 rrmJ ribosomal RNA large subunit methyltransferase J 16762059;Salmonella enterica 31 SO1197 ftsH endopeptidase, family M41 16762058;Salmonella enterica 21 SO1198 folP dihydropteroate synthase 26249760;Escherichia coli CFT073 48 SO1199 glmM phosphoglucosamine mutase 16762056;Salmonella enterica 41 SO1200 tpiA triosephosphate isomerase (5.3.1.1) 30249739;Nitrosomonas europaea 61 PMID:6092857 SO1209 pnp polyribonucleotide nucleotidyltransferase 28899226;Vibrio parahaemolyticus 28 SO1213 none hydrolase, TatD family 28899212;Vibrio parahaemolyticus 110 SO1217 deoC deoxyribose-phosphate aldolase 26251271;Escherichia coli CFT073 32 SO1218 deoA thymidine phosphorylase 16763363;Salmonella enterica 39 SO1219 deoB phosphopentomutase 9656916;Vibrio cholerae 33 SO1221 deoD-2 purine nucleoside phosphorylase 28899207;Vibrio parahaemolyticus 30 SO1223 serB phosphoserine phosphatase 12519417;Escherichia coli O157:H7 EDL933 54 SO1224 none hydrolase with alpha/beta-hydrolase domain 34496635;Chromobacterium violaceum 98 SO1226 radA DNA repair protein RadA 26251280;Escherichia coli CFT073 25 SO1232 torA trimethylamine-N-oxide reductase 9656209;Vibrio cholerae 43 SO1234 torE component of the trimethylamine N-oxide reductase system 0 SO1238 none acyltransferase family protein 50123039;Erwinia caratovora 77 SO1239 none protein with metallo-dependent phosphatase domain 33593365;Bordetella pertussis 86 SO1248 none conserved hypothetical protein 26249739;Escherichia coli CFT073 75 SO1249 none peptidase, U32 family 28899221;Vibrio parahaemolyticus 49 SO1252 none peptidase, U32 family 28897341;Vibrio parahaemolyticus 30 SO1255 none multimodular: regulatory protein (N-terminal); protein of unknown function (C-terminal) 17130577;Nostoc sp. PCC 7120 103 SO1258 none adenylosuccinate synthetase, putative 20809040;Thermoanaerobacter tengcongensis 100 SO1261 none mercaptopyruvate sulfurtransferase 9658033;Vibrio cholerae 91 SO1264 none protein with FAD/NAD(P)-binding domain 28867338;Pseudomonas syringae 56 SO1267 none protein with Class I glutamine amidotransferase-like domain 9946141;Pseudomonas aeruginosa 46 SO1268 none glutamine synthetase 28872421;Pseudomonas syringae 32 SO1274 none protein with FAD/NAD(P)-binding domain 9948857;Pseudomonas aeruginosa 27 SO1275 gabD succinate-semialdehyde dehydrogenase 28867531;Pseudomonas syringae 32 SO1276 gabT 4-aminobutyrate aminotransferase 12517095;Escherichia coli O157:H7 EDL933 35 SO1286 dnaG DNA primase 34499218;Chromobacterium violaceum 59 SO1289 gcp O-sialoglycoprotein endopeptidase 28897182;Vibrio parahaemolyticus 32 SO1291 folB dihydroneopterin aldolase 28867770;Pseudomonas syringae 65 SO1292 folK-2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, putative 9946454;Pseudomonas aeruginosa 92 SO1293 none undecaprenyl pyrophosphate phosphatase 28897187;Vibrio parahaemolyticus 53 SO1300 hemL glutamate-1-semialdehyde-2,1-aminomutase 28899249;Vibrio parahaemolyticus 32 SO1301 pyrB aspartate carbamoyltransferase 33593545;Bordetella pertussis 64 SO1310 none peptidase, family S9 21230227;Xanthomonas campestris 103 SO1313 none protein with actin-like ATPase domain 29653533;Coxiella burnetii 75 SO1314 none peptidase, M23/M37 family 9655065;Vibrio cholerae 66 SO1315 tyrS tyrosyl-tRNA synthetase 9655066;Vibrio cholerae 27 SO1322 pfs 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 9656950;Vibrio cholerae 62 SO1324 gltD glutamate synthase, small subunit 9656948;Vibrio cholerae 42 SO1325 gltB glutamate synthase, large subunit 26249799;Escherichia coli CFT073 42 SO1326 none protein with ribulose-phoshate binding barrel domain 50119273;Erwinia caratovora 56 SO1330 mutH DNA mismatch repair protein MutH 50119924;Erwinia caratovora 51 SO1331 none nudix hydrolase (MutT/nudix family) 50119925;Erwinia caratovora 24 SO1334 lgt prolipoprotein diacylglyceryl transferase 9655112;Vibrio cholerae 44 SO1335 thyA thymidylate synthase 26249257;Escherichia coli CFT073 25 SO1341 nadB L-aspartate oxidase 9657047;Vibrio cholerae 28 SO1347 lepB signal peptidase I 28899347;Vibrio parahaemolyticus 54 SO1348 rnc ribonuclease III 9657039;Vibrio cholerae 42 SO1350 recO DNA repair protein RecO 28871357;Pseudomonas syringae 109 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 50122197;Erwinia caratovora 32 SO1352 acpS holo-(acyl-carrier protein) synthase 16761489;Salmonella enterica 65 SO1354 none hemolysin protein, putative 28899310;Vibrio parahaemolyticus 46 SO1358 rimM 16S rRNA processing protein RimM 28899306;Vibrio parahaemolyticus 68 SO1359 trmD tRNA (guanine-N1)-methyltransferase 50122279;Erwinia caratovora 23 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive 15981218;Yersinia pestis 39 SO1362 tyrA multimodular: chorismate mutase T (N-terminal); prephenate dehydrogenase (C-terminal) 9655136;Vibrio cholerae 60 SO1364 none iron-sulfur cluster-binding protein 28897962;Vibrio parahaemolyticus 86 SO1367 pheA multimodular: chorismate mutase P (N-terminal); prephenate dehydrogenase (middle); protein with aldolase domain (C-terminal) 50122272;Erwinia caratovora 55 SO1368 pepA-2 cytosol aminopeptidase 9657083;Vibrio cholerae 24 SO1374 none acetyltransferase, GNAT family 51245346;Desulfotalea psychrophila 116 SO1375 none carboxypeptidase 9655911;Vibrio cholerae 63 SO1378 none peptidase, family C56 unassigned peptidases 9950562;Pseudomonas aeruginosa 37 SO1383 none ATP-dependent RNA helicase, DEAD box family 26246770;Escherichia coli CFT073 58 SO1388 none aminopeptidase P, putative 28899795;Vibrio parahaemolyticus 63 SO1390 none peptidyl-prolyl cis-trans isomerase, FKBP-type 28871042;Pseudomonas syringae 56 SO1397 none cytosine deaminase 34557713;Wolinella succinogenes 29 SO1404 none endoribonuclease L-PSP, putative 28898948;Vibrio parahaemolyticus 32 SO1405 none transglutaminase family protein 12721565;Pasteurella multocida 52 SO1408 none helicase, putative 9655262;Vibrio cholerae 27 SO1409 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9655263;Vibrio cholerae 34 SO1421 ifcA-1 multimodular fumarate reductase: protein with multiheme cytochrome domain (N- terminal); subunit with FAD/NAD binding and catalytic domains (C-terminal) 19703402;Fusobacterium nucleatum 80 SO1429 dmaA-1 anaerobic dimethyl sulfoxide reductase, A subunit 16419476;Salmonella typhimurium 82 SO1430 dmsB-1 anaerobic dimethyl sulfoxide reductase, B subunit 28898222;Vibrio parahaemolyticus 54 SO1447 none retinol acyltransferase domain protein 0 SO1455 none DNA repair protein, RadC family 9654937;Vibrio cholerae 40 SO1478 none methylase, putative 37519601;Gloeobacter violaceus 115 SO1483 aceB malate synthase A (2.3.3.9) 15981642;Yersinia pestis 32 PMID:4874804 SO1484 aceA isocitrate lyase (4.1.3.1) 9655180;Vibrio cholerae 17 PMID:3049537 SO1486 none cytosolic long-chain acyl-CoA thioester hydrolase family protein 9946308;Pseudomonas aeruginosa 60 SO1490 adhB alcohol dehydrogenase II 34498183;Chromobacterium violaceum 34 SO1492 none peptidyl-prolyl cis-trans isomerase, cyclophilin family 9949348;Pseudomonas aeruginosa 60 SO1493 malQ 4-alpha-glucanotransferase 9657393;Vibrio cholerae 90 SO1494 glgB 1,4-alpha-glucan branching enzyme 50842590;Propionibacterium acnes 69 SO1495 glgX glycosyl hydrolase 16760317;Salmonella enterica 66 SO1496 none glycogen phosphorylase family protein 22298324;Thermosynechococcus elongatus 68 SO1498 glgC glucose-1-phosphate adenylyltransferase 30249970;Nitrosomonas europaea 56 SO1499 glgA glycogen synthase 37520501;Gloeobacter violaceus 117 SO1501 none ATP-dependent RNA helicase, DEAD box family 17545258;Ralstonia solanacearum 66 SO1502 none cobalamin synthesis protein/P47K family protein 15979330;Yersinia pestis 91

SO1519 none iron-sulfur cluster-binding protein 34540894;Porphyromonas gingivalis 66 SO1552.1 none hypothetical protease with the C-terminal PDZ domain 0 SO1552.2 none hypothetical protease with the C-terminal PDZ domain 0 SO1523 none NAD kinase 28897424;Vibrio parahaemolyticus 48 SO1525 dxs deoxyxylulose-5-phosphate synthase 9655344;Vibrio cholerae 33 SO1526 ispA geranyltranstransferase 28897461;Vibrio parahaemolyticus 52 SO1534 none hydrolase with alpha/beta-hydrolase domain 28897467;Vibrio parahaemolyticus 83 SO1536 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 15979098;Yersinia pestis 52 SO1538 none isocitrate dehydrogenase, NAD-dependent (1.1.1.42) 21230436;Xanthomonas campestris 50 SO1549 xni exodeoxyribonuclease IX 50119958;Erwinia caratovora 95 SO1561 none peptidase, M1 family 21232914;Xanthomonas campestris 89 SO1571 none protein with FAD/NAD(P)-binding domain 45656876;Leptospira interrogans 100 SO1575 none NOL1/NOP2/sun family putative RNA methylase 49474994;Bartonella henselae 112 SO1576 none glutathione S-transferase family protein 9657995;Vibrio cholerae 27 SO1577 none glutathione S-transferase family protein 9657996;Vibrio cholerae 53 SO1583 none protein with Zn-dependent exopeptidase domain 9656845;Vibrio cholerae 70 SO1585 none fumarylacetoacetate hydrolase family protein 9658447;Vibrio cholerae 56 SO1599 none multimodular beta-ketoacyl synthase: protein with thiolase-like domain (N-terminal); protein with thioesterase/thiol ester dehydrase-isomerase domain (C-terminal) 17134493;Nostoc sp. PCC 7120 83 SO1602_1 none multimodular beta-ketoacyl synthase: proteins of unknown function 17135466;Nostoc sp. PCC 7120 62 SO1602_2 none multimodular beta-ketoacyl synthase: proteins of unknown function 17135466;Nostoc sp. PCC 7120 91 SO1602_3 none multimodular beta-ketoacyl synthase: proteins of unknown function 17135464;Nostoc sp. PCC 7120 112

SO1604 none 4'-phosphopantetheinyl transferase family protein 21675005;Chlorobaculum tepidum 123 SO1606 none metallo-beta-lactamase superfamily protein 9655231;Vibrio cholerae 86 SO1622 none protein with flavoprotein domain 15979106;Yersinia pestis 93 SO1624 purU formyltetrahydrofolate deformylase 9656534;Vibrio cholerae 36 SO1625 dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 16418717;Salmonella typhimurium 20 SO1626 glnD protein-P-II uridylyltransferase 28899094;Vibrio parahaemolyticus 71 SO1627 map methionine aminopeptidase, type I 9656823;Vibrio cholerae 35 SO1631 pyrH uridylate kinase 9656819;Vibrio cholerae 17 SO1633 uppS undecaprenyl diphosphate synthase 26246120;Escherichia coli CFT073 47 SO1634 cdsA phosphatidate cytidylyltransferase 34497656;Chromobacterium violaceum 57 SO1635 dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase 28899086;Vibrio parahaemolyticus 41 SO1636 none membrane-associated zinc metalloprotease, putative 28899085;Vibrio parahaemolyticus 66 SO1639 lpxD UDP-3-O-(3-hydroxymyristoyl) glucosamine n-acyltransferase 50119981;Erwinia caratovora 67 SO1640 fabZ (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase 28899081;Vibrio parahaemolyticus 44 SO1641 lpxA acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase 9656808;Vibrio cholerae 57 SO1642 lpxB lipid A disaccharide synthase 1786379;Escherichia coli K12 54 SO1643 rnhB ribonuclease HII 28899078;Vibrio parahaemolyticus 33 SO1644 dnaE DNA polymerase III, alpha subunit 26246130;Escherichia coli CFT073 32 SO1651 none transferase 9946691;Pseudomonas aeruginosa 84 SO1653 rfbD dTDP-4-dehydrorhamnose reductase 28572206;Tropheryma whipplei 89 SO1655 cysQ-2 cysQ protein 15981453;Yersinia pestis 66 SO1656 none manno(fructo) kinase 50120046;Erwinia caratovora 54 SO1664 galE UDP-glucose 4-epimerase 2636421;Bacillus subtilis 39 SO1665 galU UTP-glucose-1-phosphate uridylyltransferase 26247565;Escherichia coli CFT073 33 SO1666 phhA phenylalanine-4-hydroxylase (1.14.16.1) 28869027;Pseudomonas syringae 53 8108417 SO1667 none pterin-4-alpha-carbinolamine dehydratase 9946770;Pseudomonas aeruginosa 28 SO1670 none fumarylacetoacetate hydrolase family protein (3.7.1.2) 34496426;Chromobacterium violaceum 42 PMID:9734339 SO1671 none glutathione S-transferase family protein (5.2.1.20) 33592366;Bordetella pertussis 53 PMID:4692831 SO1676 metA homoserine O-succinyltransferase 9656123;Vibrio cholerae 56 SO1677 atoB acetyl-CoA acetyltransferase (2.3.1.16) 9950110;Pseudomonas aeruginosa 45 PMID:2191949 SO1678 mmsA methylmalonate-semialdehyde dehydrogenase (1.2.1.27) 9946633;Pseudomonas aeruginosa 30 PMID:3149395,15272169 SO1679 none acyl-CoA dehydrogenase family protein 34497539;Chromobacterium violaceum 44 SO1680 none enoyl-CoA hydratase/isomerase family protein 34497538;Chromobacterium violaceum 37 SO1681 none enoyl-CoA hydratase/isomerase family protein (4.2.1.17) 34497537;Chromobacterium violaceum 88 PMID:3286611,15137080 SO1682 mmsB 3-hydroxyisobutyrate dehydrogenase (1.1.1.31) 33592545;Bordetella pertussis 52 PMID:1339433 SO1683 none 3-oxoacyl-(acyl-carrier-protein) reductase, putative 9950619;Pseudomonas aeruginosa 59 SO1686 none prolyl oligopeptidase family protein 1001263;Synechocystis PCC6803 110 SO1694 none FAD-binding protein 0 SO1708 cat2 4-hydroxybutyrate coenzyme A transferase 45655775;Leptospira interrogans 57 SO1734 none glyoxalase family protein 9946779;Pseudomonas aeruginosa 48 SO1741 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 28897876;Vibrio parahaemolyticus 88 SO1742 none protein with thiolase-like domains 51244593;Desulfotalea psychrophila 99 SO1743 none hydrolase, alpha/beta hydrolase fold family 21229694;Xanthomonas campestris 73 SO1744 none AMP-binding protein 9107435;Xylella fastidiosa 86 SO1745 none 3-beta hydroxysteroid dehydrogenase/isomerase family protein 21229697;Xanthomonas campestris 81 SO1755 none phosphoglucomutase/phosphomannomutase family protein 9658485;Vibrio cholerae 43 SO1756 none glyoxalase family protein 16759387;Salmonella enterica 120 SO1763 sat streptogramin A acetyl transferase 50122112;Erwinia caratovora 41 SO1769 none glutamate decarboxylase, putative 28898011;Vibrio parahaemolyticus 40 SO1770 none glycerate kinase, putative (2.7.1.31) 16761409;Salmonella enterica 56 PMID:10601204 SO1786 glnS glutaminyl-tRNA synthetase 28897606;Vibrio parahaemolyticus 30 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase 9656444;Vibrio cholerae 58 SO1789 none UDP-2,3-diacylglucosamine hydrolase 15981028;Yersinia pestis 80 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B 9656377;Vibrio cholerae 29 SO1791 cysS cysteinyl-tRNA synthetase 28897924;Vibrio parahaemolyticus 30 SO1792 folD bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene- tetrahydrofolate cyclohydrolase 9947778;Pseudomonas aeruginosa 33 SO1794 clpP ATP-dependent Clp protease, proteolytic subunit 9656458;Vibrio cholerae 14 SO1795 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX 15981094;Yersinia pestis 18 SO1796 lon ATP-dependent protease La 50120089;Erwinia caratovora 19 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D 9656453;Vibrio cholerae 89 SO1800 none protein with NAD(P)-binding Rossmann-fold domain 9656259;Vibrio cholerae 17 SO1810 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 15980345;Yersinia pestis 80 SO1812 mdeA methionine gamma-lyase (4.4.1.11) 19704751;Fusobacterium nucleatum 63 PMID:11083813,3657560 SO1815 none histone deacetylase/AcuC/AphA family protein 28898919;Vibrio parahaemolyticus 74 SO1819 dinG ATP-dependent helicase DinG 9656384;Vibrio cholerae 68 SO1820 polB DNA polymerase II 9655692;Vibrio cholerae 80 SO1832 ppiC-2 peptidyl-prolyl cis-trans isomerase C 9950385;Pseudomonas aeruginosa 25

SO1834 none acetyltransferase, GNAT family 2633543;Bacillus subtilis 114 SO1844 none extracellular nuclease, putative 9950092;Pseudomonas aeruginosa 71 SO1851 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9655989;Vibrio cholerae 73 SO1856 fabA 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase 1574786;Haemophilus influenzae 40 SO1857 none conserved hypothetical protein 28898364;Vibrio parahaemolyticus 72 SO1861 uvrC excinuclease ABC, C subunit 15979888;Yersinia pestis 55 SO1862 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 12721166;Pasteurella multocida 52 SO1870 speA biosynthetic arginine decarboxylase 9658242;Vibrio cholerae 37 SO1873 none protein with NAD(P)-binding Rossmann-fold domain 16803870;Listeria monocytogenes 86 SO1877 bcp bacterioferritin comigratory protein 28899049;Vibrio parahaemolyticus 39 SO1879 dapA dihydrodipicolinate synthase 1573221;Haemophilus influenzae 54 SO1887 none protein with Class I glutamine amidotransferase-like domain 30020793;Bacillus cereus 97 SO1891 none 3-oxoadipate CoA-succinyl transferase, beta subunit (2.8.3.6) 28870617;Pseudomonas syringae 20 PMID:1624453 SO1892 atoD acetate CoA-transferase, subunit A (2.8.3.6) 9948001;Pseudomonas aeruginosa 33 PMID:1624453 SO1893 mvaB hydroxymethylglutaryl-CoA lyase (4.1.3.5;4.1.3.4) 28869929;Pseudomonas syringae 53 PMID:2742863,1332752 SO1894 none multimodular: acetyl-CoA carboxylase, biotin carboxylase (N-terminal); protein with hybrid domain (C-terminal) (6.4.1.4) 9948015;Pseudomonas aeruginosa 50 PMID:7278686,911753 SO1895 none methylglutaconyl-CoA hydratase (4.2.1.18) 28869924;Pseudomonas syringae 80 PMID:15096032 SO1896 pccB-1 3-methylcrotonyl CoA carboxylase, beta subunit (6.4.1.4) 15159867;Agrobacterium tumefaciens 32 PMID:7278686,911753 SO1897 ivd isovaleryl-CoA dehydrogenase (1.3.99.10) 9948019;Pseudomonas aeruginosa 25 PMID:11231285 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (1.1.1.44) 2634821;Bacillus subtilis 72 PMID:786365 SO1910 none 1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative 51244774;Desulfotalea psychrophila 83 SO1911 none oxidoreductase, short chain dehydrogenase/reductase family 9104970;Xylella fastidiosa 119 SO1912 tesB acyl-CoA thioesterase II 15981079;Yersinia pestis 51 SO1926 gltA citrate synthase (2.3.3.1) 9656641;Vibrio cholerae 25 PMID:6380576 SO1927 none hypothetical succinate dehydrogenase, cytochromeb subunit (1.3.5.1) 16759671;Salmonella enterica 49 PMID:6383359 SO1927.1 none hypothetical succinate dehydrogenase, hydrophobic subunit (1.3.5.1) 16759672;Salmonella enterica 61 PMID:6383359 SO1928 sdhA succinate dehydrogenase, flavoprotein subunit (1.3.5.1) 50120298;Erwinia caratovora 22 PMID:6383359 SO1929 sdhB succinate dehydrogenase, iron-sulfur protein (1.3.5.1) 15979179;Yersinia pestis 22 PMID:6388571 SO1930 sucA 2-oxoglutarate dehydrogenase, E1 component (1.2.4.2) 9656635;Vibrio cholerae 34 PMID:6376123 SO1931 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase (2.3.1.61) 28897622;Vibrio parahaemolyticus 29 PMID:6376124

SO1932 sucC succinyl-CoA synthase, beta subunit (6.2.1.5) 9656633;Vibrio cholerae 20 PMID:3002435 SO1933 sucD succinyl-CoA synthase, alpha subunit (6.2.1.5) 9656632;Vibrio cholerae 13 PMID:3002435 SO1936 none acetyltransferase, GNAT family 16124468;Caulobacter crescentus 104 SO1938 cobB NAD-dependent deacetylase of acetyl-CoA synthetase 28898298;Vibrio parahaemolyticus 56 SO1939 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 2313561;Helicobacter pylori 94 SO1952 ggt-2 gamma-glutamyltranspeptidase 16762751;Salmonella enterica 52 SO1953 none protein with Acyl-CoA N-acyltransferase domain 9949352;Pseudomonas aeruginosa 97 SO1961 maa maltose O-acetyltransferase 6322243;Saccharomyces cerevisiae 52 SO1962 none 4-hydroxyphenylpyruvate dioxygenase (1.13.11.27) 42524895;Bdellovibrio bacteriovorus 79 PMID:7813886,10467142 SO1963 none homogentisate 1,2-dioxygenase (1.13.11.5) 30018491;Bacillus cereus 88 PMID:15262943,10220173 SO1971 none AMP-binding family protein 39933535;Rhodopseudomonas palustris 57 SO1975 none Zinc carboxypeptidase-related protein 42523860;Bdellovibrio bacteriovorus 82 SO1978 none protein with tryptophan synthase beta subunit-like PLP-dependent enzyme domain 9656265;Vibrio cholerae 82 SO1979 none MutT/nudix family protein 34495487;Chromobacterium violaceum 107 SO1980 none phosphoribosyl transferase domain protein 34495488;Chromobacterium violaceum 93 SO1987 none ATP-dependent protease La domain protein 9656868;Vibrio cholerae 85 SO1988 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 23097808;Oceanobacillus iheyensis 122 SO1994 none membrane-bound lytic transglycolase-related protein 9656495;Vibrio cholerae 103 SO1995 none peptidyl-prolyl cis-trans isomerase, FkbP family 21232013;Xanthomonas campestris 85 SO1997 none peptidase, M1 family 21232914;Xanthomonas campestris 72 SO1999 none phospholipase/carboxylesterase family protein 29655258;Coxiella burnetii 81 SO2001 ushA bifunctional: UDP-sugar hydrolase; 5'-nucleotidase 28897981;Vibrio parahaemolyticus 48 SO2006 none tRNA-dihydrouridine synthase 28898849;Vibrio parahaemolyticus 60 SO2012 apt adenine phosphoribosyltransferase 15981064;Yersinia pestis 24 SO2013 dnaX multimodular DNA polymerase III: 1786676;Escherichia coli K12 46 SO2015 recR recombination protein RecR 9655522;Vibrio cholerae 46 SO2018 adk adenylate kinase 15981059;Yersinia pestis 29 SO2019 hemH-1 ferrochelatase 9655448;Vibrio cholerae 57 SO2020 gsk inosine-guanosine kinase 26246492;Escherichia coli CFT073 38 SO2021 nadE NH(3)-dependent NAD(+) synthetase 9657599;Vibrio cholerae 38 SO2024 none hydrolase with alpha/beta-hydrolase domain 15981918;Yersinia pestis 117 SO2040 none multimodular: protein with muramidase domain (N-terminal); transglycosylase with lysozyme-like domain (C-terminal) 15025708;Clostridium acetobutylicum 81 SO2042 none protein with sulfite oxidase domain 15074316;Sinorhizobium meliloti 48 SO2044 gloA lactoylglutathione lyase 28898883;Vibrio parahaemolyticus 35 SO2047 none prolyl oligopeptidase family protein 21232935;Xanthomonas campestris 77 SO2050 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 21229564;Xanthomonas campestris 84 SO2052 none protein with nucleotide-binding domain 9947527;Pseudomonas aeruginosa 51 SO2054 adhC alcohol dehydrogenase class III (1.1.1.1) 15979544;Yersinia pestis 17 PMID:15466022 SO2055 none esterase, putative 9949787;Pseudomonas aeruginosa 48 SO2067_1 hisI multimodular: phosphoribosyl-ATP pyrophosphatase (N-terminal); phosphoribosyl-AMP cyclohydrolase (C-terminal) 16420609;Salmonella typhimurium 42 SO2067_2 hisI multimodular: phosphoribosyl-ATP pyrophosphatase (N-terminal); phosphoribosyl-AMP cyclohydrolase (C-terminal) 15979585;Yersinia pestis 41 SO2068 hisF imidazole glycerol phosphate synthase subunit 50121512;Erwinia caratovora 30 SO2069 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 50121511;Erwinia caratovora 53 SO2070 hisH imidazole glycerol phosphate synthase subunit 1573451;Haemophilus influenzae 65 SO2071_1 hisB multimodular: histidinol-phosphatase (N-terminal); imidazoleglycerol-phosphate dehydratase (C-terminal) 50121509;Erwinia caratovora 48 SO2071_2 hisB multimodular: histidinol-phosphatase (N-terminal); imidazoleglycerol-phosphate dehydratase (C-terminal) 28897914;Vibrio parahaemolyticus 40 SO2072 hisC histidinol-phosphate aminotransferase 9655606;Vibrio cholerae 58 SO2073 hisD bifunctional HisD: L-histidinal:NAD+ dehydrogenase ; L-histidinol:NAD+ dehydrogenase 1788331;Escherichia coli K12 54 SO2074 hisG ATP phosphoribosyltransferase 26248394;Escherichia coli CFT073 39 SO2081 none ATP-dependent helicase, DinG family 50121303;Erwinia caratovora 80 SO2085 pheS phenylalanyl-tRNA synthetase, alpha subunit 9655700;Vibrio cholerae 25 SO2086 pheT phenylalanyl-tRNA synthetase, beta subunit 9655701;Vibrio cholerae 45 SO2088 none lipid A biosynthesis acyltransferase, putative 12720607;Pasteurella multocida 114 SO2089 hypA hydrogenase expression/formation protein HypA 34557194;Wolinella succinogenes 80 SO2091 hypD hydrogenase expression/formation protein HypD 34557191;Wolinella succinogenes 52 SO2092 hypC hydrogenase assembly chaperone hypC/hupF 0 SO2094 hypF hydrogenase maturation protein HypF 34557188;Wolinella succinogenes 92 SO2096 none peptidase, family M52 unassigned peptidases 34557996;Wolinella succinogenes 69 SO2098 hyaB quinone-reactive Ni/Fe hydrogenase, large subunit (1.18.99.1) 34557998;Wolinella succinogenes 51 PMID:8021226 SO2099 hoxK quinone-reactive Ni/Fe hydrogenase, small subunit precursor (1.18.99.1) 34557999;Wolinella succinogenes 45 PMID:8021226 SO2107 mdoG-1 periplasmic glucans biosynthesis protein MdoG 9655775;Vibrio cholerae 32 SO2108 mdoH periplasmic glucans biosynthesis protein MdoH 9655774;Vibrio cholerae 37 SO2115 none L-asparaginase 28899555;Vibrio parahaemolyticus 65 SO2116_1 none multimodular: oxidoreductase (N-terminal); acetyltransferase (C-terminal) 9657984;Vibrio cholerae 57 SO2116_2 none multimodular: oxidoreductase (N-terminal); acetyltransferase (C-terminal) 1788938;Escherichia coli K12 73 SO2136 adhE multimodular: aldehyde-alcohol dehydrogenase (N-terminal); alcohol dehydrogenase (C- terminal) (1.2.1.10;1.1.1.1) 50121254;Erwinia caratovora 22 PMID:4301680 SO2147 recD exodeoxyribonuclease V, alpha subunit 9656885;Vibrio cholerae 73 SO2148 recB exodeoxyribonuclease V, beta subunit 15979088;Yersinia pestis 100 SO2149 recC exodeoxyribonuclease V, gamma subunit 9656888;Vibrio cholerae 98 SO2150 none transglutaminase family protein 28869452;Pseudomonas syringae 117 SO2153 moxR MoxR protein 9948964;Pseudomonas aeruginosa 48 SO2155 none glyoxalase family protein 18309433;Clostridium perfringens 40 SO2156 none alpha amylase family protein 29346183;Bacteroides thetaiotaomicron 85 SO2174 none cyclic nucleotide phosphodiesterase, putative 9946134;Pseudomonas aeruginosa 92 SO2178 ccpA cytochrome c551 peroxidase 28898492;Vibrio parahaemolyticus 47 SO2180 none peptidase, M23/M37 family 21231696;Xanthomonas campestris 90 SO2185 ppx exopolyphosphatase 16761420;Salmonella enterica 92 SO2189 none protein with actin-like ATPase domain 15980809;Yersinia pestis 73 SO2191 metC cystathionine beta-lyase 9656186;Vibrio cholerae 38 SO2192 none sensor histidine kinase 51244604;Desulfotalea psychrophila 119 SO2196 none LPXTG-site transpeptidase family protein 27376087;Bradyrhizobium japonicum 109

SO2198 none protein with Zn-dependent exopeptidase domain 21232946;Xanthomonas campestris 91 SO2203 dgkA diacylglycerol kinase 28896969;Vibrio parahaemolyticus 56 SO2204 none DNA ligase, ATP-dependent 9656048;Vibrio cholerae 103 SO2208 none phosphotyrosine protein phosphatase 28898838;Vibrio parahaemolyticus 47 SO2213 none oligo-1,6-glucosidase 21231906;Xanthomonas campestris 42 SO2215 none sun protein, putative 42522650;Bdellovibrio bacteriovorus 84 SO2217 ddlA D-alanine--D-alanine ligase 9657982;Vibrio cholerae 68 SO2218 asnS asparaginyl-tRNA synthetase 1574761;Haemophilus influenzae 22 SO2220 none MutT/nudix family protein 17986745;Brucella melitensis 80 SO2221 pabB para-aminobenzoate synthase, component I 16420356;Salmonella typhimurium 54 SO2222_1 none multimodular fumarate hydratase: alpha subunit (N-terminal); beta subunit (C-terminal) (4.2.1.2) 9655793;Vibrio cholerae 22 PMID:3005475 SO2222_2 none multimodular fumarate hydratase: alpha subunit (N-terminal); beta subunit (C-terminal) (4.2.1.2) 2984001;Aquifex aeolicus 78 PMID:3005475 SO2223 none peptidase, putative 21230563;Xanthomonas campestris 80 SO2224 none acetyltransferase, GNAT family 17547895;Ralstonia solanacearum 104 SO2225 none protein with Zn-dependent exopeptidase domain 9658373;Vibrio cholerae 49 SO2229 hrpA ATP-dependent helicase HrpA 9655877;Vibrio cholerae 52

SO2245 dnaQ-1 DNA polymerase III, epsilon subunit 28871797;Pseudomonas syringae 64 SO2248 sdaA L-serine / L-threonine dehydratase 1789498;Escherichia coli K12 51 SO2250 nagZ beta-hexosaminidase 12720279;Pasteurella multocida 64 SO2251 none hydrolase with alpha/beta-hydrolase domain 9656425;Vibrio cholerae 44 SO2253 none acylphosphatase 4982131;Thermotoga maritima 121 SO2260 suhB inositol monophosphatase 16421091;Salmonella typhimurium 48 SO2261 none RNA methyltransferase, TrmH family, group 1 28897368;Vibrio parahaemolyticus 42 SO2262 cysE serine acetyltransferase 39997667;Geobacter sulfurreducens 45 SO2264 iscS cysteine desulfurase 9655193;Vibrio cholerae 23 SO2266 none Fe-S cluster assembly protein 28897372;Vibrio parahaemolyticus 27 SO2274 ndk nucleoside diphosphate kinase 15980850;Yersinia pestis 32 SO2278 ilvH acetolactate synthase III, small subunit 28897127;Vibrio parahaemolyticus 28 SO2279 ilvI acetolactate synthase III, large subunit 9657062;Vibrio cholerae 26 SO2281 none alkaline phosphatase 17134430;Nostoc sp. PCC 7120 79 SO2296 ribE-1 riboflavin synthase, alpha subunit 1574454;Haemophilus influenzae 62 SO2299 thrS threonyl-tRNA synthetase 15980427;Yersinia pestis 23 SO2303 trxB thioredoxin reductase 1787114;Escherichia coli K12 19

SO2308 none ATPase, AAA family 26246918;Escherichia coli CFT073 41 SO2310 serS seryl-tRNA synthetase 15979428;Yersinia pestis 36 SO2326 cheD-2 chemotaxis protein CheD, putative 39995832;Geobacter sulfurreducens 80 SO2333 none hydrolase, alpha/beta fold family 15980622;Yersinia pestis 77 SO2336 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific 50120275;Erwinia caratovora 55 SO2337 msrA peptide methionine sulfoxide reductase 2621609;Methanobacterium thermoautotrophicum 64 SO2338 astE succinylglutamate desuccinylase 28869043;Pseudomonas syringae 102 SO2339 none alpha keto acid dehydrogenase complex, E1 component, alpha subunit (1.2.1.25) 2113930;Mannheimia succiniciproducens 103 PMID:4308861 SO2340 none alpha keto acid dehydrogenase complex, E1 component, beta subunit (1.2.1.25) 6457689;Deinococcus radiodurans 65 PMID:4308861 SO2341 none multimodular: biotin/lipoyl-binding protein (N-terminal); alpha keto acid dehydrogenase (C-terminal) (1.2.4.4) 10581635;Halobacterium sp. NRC-1 98 PMID:4308861 SO2342 nadA quinolinate synthetase complex, subunit A 28897837;Vibrio parahaemolyticus 24 SO2345 gapA-2 glyceraldehyde 3-phosphate dehydrogenase (1.2.1.12) 33592150;Bordetella pertussis 36 PMID:9696782 SO2347 gapA-3 glyceraldehyde 3-phosphate dehydrogenase (1.2.1.12) 9658273;Vibrio cholerae 42 PMID:9019141 SO2350 aspC-1 aspartate aminotransferase (2.6.1.5) 9655781;Vibrio cholerae 47 PMID:3897210 SO2354 none protein with adenine nucleotide alpha hydrolases-like domain 9947118;Pseudomonas aeruginosa 31 SO2380 none RecQ domain protein 28872517;Pseudomonas syringae 68 SO2388 none beta-lactamase 15160335;Agrobacterium tumefaciens 65 SO2390 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase 9654728;Vibrio cholerae 74 SO2394 dacB penicillin-binding protein 4 12721010;Pasteurella multocida 114 SO2395 none acyl-CoA dehydrogenase family protein 9950410;Pseudomonas aeruginosa 60 SO2396 none nucleoprotein/polynucleotide-associated enzyme 1786550;Escherichia coli K12 96 SO2397 none oxidoreductase, short-chain dehydrogenase/reductase family 6457780;Deinococcus radiodurans 70 SO2398 pyrF orotidine 5`-phosphate decarboxylase 28898800;Vibrio parahaemolyticus 42 SO2399 none protein with protein prenylyltransferase domain 9656447;Vibrio cholerae 73 SO2403 cmk cytidylate kinase 28898805;Vibrio parahaemolyticus 38 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 9656253;Vibrio cholerae 34 SO2406 aspC-2 aspartate aminotransferase 1574463;Haemophilus influenzae 78 SO2408 none radical activating enzyme 28898155;Vibrio parahaemolyticus 56 SO2410 serC 3-phosphoserine/phosphohydroxythreonine aminotransferase 28898021;Vibrio parahaemolyticus 54 SO2411 gyrA DNA gyrase, A subunit 28898706;Vibrio parahaemolyticus 27 SO2413 ubiG bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylase 15979274;Yersinia pestis 43 SO2414 none phosphoglycolate phosphatase, putative 29653698;Coxiella burnetii 106 SO2415 nrdA ribonucleoside-diphosphate reductase, alpha subunit 50120138;Erwinia caratovora 21 SO2416 nrdB ribonucleoside-diphosphate reductase, beta subunit 12721013;Pasteurella multocida 26 SO2419 none 2,4-dienoyl-CoA reductase, putative 34495624;Chromobacterium violaceum 51 SO2420 sppA signal peptide peptidase SppA, 67K type 9656536;Vibrio cholerae 76 SO2421 ansA L-asparaginase I 16760601;Salmonella enterica 36 SO2424 none zinc carboxypeptidase domain protein 7226313;Neisseria meningitidis 67 SO2429 ruvB Holliday junction DNA helicase RuvB 50121416;Erwinia caratovora 26 SO2430 ruvA Holliday junction DNA helicase RuvA 28897825;Vibrio parahaemolyticus 39 SO2431 ruvC crossover junction endodeoxyribonuclease RuvC 9656375;Vibrio cholerae 34 SO2433 aspS aspartyl-tRNA synthetase 9655641;Vibrio cholerae 33 SO2435 none methyltransferase, putative 16760855;Salmonella enterica 45 SO2436 none methyltransferase, putative 28897818;Vibrio parahaemolyticus 47 SO2437 none protein with metalloprotease domain 0 SO2440 thiH thiamin biosynthesis protein 28899796;Vibrio parahaemolyticus 54 SO2441 thiG thiamin biosynthesis protein 15981658;Yersinia pestis 42 SO2443 thiF adenyl transferase for ThiS 26250763;Escherichia coli CFT073 87 SO2444_1 thiDE multimodular: hydroxy-(phospho)methylpyrimidine kinase (N-terminal); thiamine-phosphate pyrophosphorylase (C-terminal) 9655784;Vibrio cholerae 99 SO2444_2 thiDE multimodular: hydroxy-(phospho)methylpyrimidine kinase (N-terminal); thiamine-phosphate pyrophosphorylase (C-terminal) 15981656;Yersinia pestis 54 SO2445 thiC thiamin biosynthesis protein ThiC 15141415;Sinorhizobium meliloti 25 SO2448 none MutT/nudix family protein 9658004;Vibrio cholerae 66 SO2449 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9658048;Vibrio cholerae 89 SO2450 susB alpha-glucosidase 21231903;Xanthomonas campestris 68 SO2451 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 34495816;Chromobacterium violaceum 71 SO2453 none N-ethylmaleimide reductase, putative 9658435;Vibrio cholerae 74 SO2454 none N-ethylmaleimide reductase 9947273;Pseudomonas aeruginosa 50 SO2459 cga glucoamylase 16126521;Caulobacter crescentus 69 SO2467.1 none hypothetical UV repair DNA polymerase 0 SO2471 dapE succinyl-diaminopimelate desuccinylase 9656704;Vibrio cholerae 41 SO2472 none D-alanyl-D-alanine carboxypeptidase-related protein 15981007;Yersinia pestis 89 SO2473 none hydrolase, alpha/beta fold family (3.1.1.24) 28897183;Vibrio parahaemolyticus 54 PMID:3076176 SO2474 none carbonic anhydrase 9950932;Pseudomonas aeruginosa 45 SO2476 none polysaccharide biosynthesis protein 39936413;Rhodopseudomonas palustris 81 SO2477 none alcohol dehydrogenase, iron-containing 51246318;Desulfotalea psychrophila 57 SO2478 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase 51246066;Desulfotalea psychrophila 75 SO2483 none aspartate aminotransferase, putative 12720257;Pasteurella multocida 35 SO2485 none deoxyguanosinetriphosphate triphosphohydrolase, putative 28897699;Vibrio parahaemolyticus 55 SO2486 eda 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (4.1.2.14) 15980078;Yersinia pestis 44 PMID:1339418 SO2487 edd 6-phosphogluconate dehydratase (4.2.1.12) 26248116;Escherichia coli CFT073 42 PMID:5337840 SO2488 pgl 6-phosphogluconolactonase (3.1.1.31) 34495601;Chromobacterium violaceum 86 PMID:15576773 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (1.1.1.49) 15980077;Yersinia pestis 40 PMID:1704005 SO2491 pykA pyruvate kinase II (2.7.1.40) 50121406;Erwinia caratovora 32 PMID:7559366 SO2492 none oxidoreductase, acyl-CoA dehydrogenase family 9656261;Vibrio cholerae 54 SO2494 none zinc-dependent metallopeptidase 37522712;Gloeobacter violaceus 57 SO2506 uvrB excinuclease ABC, B subunit 26246750;Escherichia coli CFT073 26 SO2510_1 none multimodular: iron-sulfur cluster binding protein (N-terminal); membrane protein (C- terminal) 28898878;Vibrio parahaemolyticus 69 SO2510_2 none multimodular: iron-sulfur cluster binding protein (N-terminal); membrane protein (C- terminal) 15979190;Yersinia pestis 119 SO2511 none membrane protein, putative 16760457;Salmonella enterica 59 SO2514 nth endonuclease III 28898882;Vibrio parahaemolyticus 21 SO2530 def-3 polypeptide deformylase 9657539;Vibrio cholerae 52 SO2532 none methylated-DNA--protein-cysteine methyltransferase, putative 21232009;Xanthomonas campestris 80 SO2535 none protein with N-terminal neuclophile aminohydolase domain 28899061;Vibrio parahaemolyticus 40 SO2536 none oxidoreductase, acyl-CoA dehydrogenase family (1.1.1.178) 50122397;Erwinia caratovora 41 SO2559 dnaQ-2 DNA polymerase III, epsilon subunit 1573090;Haemophilus influenzae 51 SO2560 rnhA ribonuclease HI 16759249;Salmonella enterica 36 SO2562 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 50122263;Erwinia caratovora 114 SO2563 none metallo-beta-lactamase family protein 33594120;Bordetella pertussis 60 SO2564 none murein transglycosylase 9656796;Vibrio cholerae 79 SO2567 menG_1 regulator of RNAse E 9656936;Vibrio cholerae 75 SO2571 none multimodular RNA helicase: nucleotidase (N-terminal); protein of unknown function (C- terminal) 9655903;Vibrio cholerae 40 SO2572 ppiB-2 peptidyl-prolyl cis-trans isomerase B 9947775;Pseudomonas aeruginosa 52 SO2577 minD septum site-determining protein MinD 9656499;Vibrio cholerae 23 SO2580 rnd ribonuclease D 12515844;Escherichia coli O157:H7 EDL933 97 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase 28897644;Vibrio parahaemolyticus 35 SO2582 none hydrolase, alpha/beta fold family 9656527;Vibrio cholerae 114 SO2583 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 21229750;Xanthomonas campestris 72 SO2586 none protein with actin-like ATPase domain 9656530;Vibrio cholerae 75 SO2587 hemB-1 delta-aminolevulinic acid dehydratase 16759350;Salmonella enterica 59 SO2588_1 none multimodular: protein of unknown function (N-terminal); protein-methionine-S-oxide reductase (C-terminal) 6968546;Campylobacter jejuni 58 SO2588_2 none multimodular: protein of unknown function (N-terminal); protein-methionine-S-oxide reductase (C-terminal) 45656443;Leptospira interrogans 67 SO2589 none oxidoreductase, iron/ascorbate family 34495500;Chromobacterium violaceum 51 SO2592 pyrD dihydroorotate dehydrogenase 9655993;Vibrio cholerae 47 SO2593 gdhB glutamate dehydrogenase, NAD-dependent 28898376;Vibrio parahaemolyticus 55 SO2600 pepN aminopeptidase N 15979463;Yersinia pestis 56 SO2601 none carboxyl-terminal protease 9655999;Vibrio cholerae 53 SO2609 none NOL1/NOP2/sun family putative RNA methylase 24112775;Shigella flexneri 59 SO2610 none hydrolase, TatD family 28898821;Vibrio parahaemolyticus 63 SO2611 pilZ type IV pilus biogenesis protein pilZ 21230483;Xanthomonas campestris 119 SO2612 holB DNA polymerase III, delta prime subunit 29653842;Coxiella burnetii 100 SO2613 tmk thymidylate kinase 15979643;Yersinia pestis 54

SO2615 pabC 4-amino-4-deoxychorismate lyase 28898825;Vibrio parahaemolyticus 107 SO2616 dcd deoxycytidine triphosphate deaminase 50120351;Erwinia caratovora 28 SO2617 udk uridine/cytidine kinase 9655502;Vibrio cholerae 27 SO2618 none ATP-binding protein, Mrp/Nbp35 family 17547098;Ralstonia solanacearum 40 SO2619 metG multimodular methionyl-tRNA sunthetase: alpha chain (N-terminal); beta chain (C-terminal) 28898843;Vibrio parahaemolyticus 34 SO2623 aat leucyl/phenylalanyl-tRNA--protein transferase 24112260;Shigella flexneri 68 SO2624 none protein with Acyl-CoA N-acyltransferase domain 9656257;Vibrio cholerae 95 SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA 9655617;Vibrio cholerae 31 SO2629 icd isocitrate dehydrogenase, NADP-dependent (1.1.1.42) 9655614;Vibrio cholerae 29 PMID:7536733 SO2631 none bifunctional: thiamin pyrimidine pyrophosphate hydrolase; thiamin pyrophosphate hydrolase 15979677;Yersinia pestis 80 SO2633 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9655600;Vibrio cholerae 22 SO2635 purB adenylosuccinate lyase 26247379;Escherichia coli CFT073 28 SO2636 none protein with clavaminate synthase-like domain 50121374;Erwinia caratovora 86 SO2638 ldh leucine dehydrogenase (1.4.1.9) 2634842;Bacillus subtilis 51 PMID:9188201 SO2643 none oxidoreductase, FAD-binding, putative 50120786;Erwinia caratovora 55 SO2644 ppsA phosphoenolpyruvate synthase 26247953;Escherichia coli CFT073 29 SO2646 aroH phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive 26247955;Escherichia coli CFT073 47 SO2647 none cytosolic long-chain acyl-CoA thioester hydrolase family protein 9949909;Pseudomonas aeruginosa 40 SO2705 topA DNA topoisomerase I 26247605;Escherichia coli CFT073 33 SO2706 astB succinylarginine dihydrolase 34496955;Chromobacterium violaceum 48 SO2707 none acetyltransferase, GNAT family 30021608;Bacillus cereus 77 SO2708 none nitroreductase family protein 39934466;Rhodopseudomonas palustris 68 SO2719 deoD-3 purine nucleoside phosphorylase 1573501;Haemophilus influenzae 61 SO2721 none protein with thioesterase/thiol ester dehydrase-isomerase domain 9947558;Pseudomonas aeruginosa 53 SO2722 none protein with thioesterase/thiol ester dehydrase-isomerase domain 9947557;Pseudomonas aeruginosa 63 SO2724 none protease, putative 17547609;Ralstonia solanacearum 77 SO2728 htpX peptidase HtpX 9655588;Vibrio cholerae 45 SO2730 pepE peptidase E 1573577;Haemophilus influenzae 78 SO2731 mdoG-2 periplasmic glucans biosynthesis protein MdoG 28872274;Pseudomonas syringae 95 SO2737 bioD dethiobiotin synthase 9946368;Pseudomonas aeruginosa 65 SO2738 bioC biotin synthesis protein 15979216;Yersinia pestis 116 SO2739 bioF 8-amino-7-oxononanoate synthase 50121748;Erwinia caratovora 77 SO2740 bioB biotin synthase 16419299;Salmonella typhimurium 35 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase 24112142;Shigella flexneri 54 SO2743 acs acetyl-coenzyme A synthetase (6.2.1.17; 6.2.1.1) 1790505;Escherichia coli K12 35 PMID:12473114,7751300 SO2744 none helicase 24113573;Shigella flexneri 65 SO2752 none protein with thioesterase/thiol ester dehydrase-isomerase domain 9656367;Vibrio cholerae 60 SO2753 none prolyl endopeptidase 37520194;Gloeobacter violaceus 66 SO2755 rnt ribonuclease T 28898888;Vibrio parahaemolyticus 32 SO2759 upp uracil phosphoribosyltransferase 28899058;Vibrio parahaemolyticus 11 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase 28899059;Vibrio parahaemolyticus 25 SO2761 purN phosphoribosylglycinamide formyltransferase 28899060;Vibrio parahaemolyticus 48 SO2762 none nagD protein 15980611;Yersinia pestis 32 SO2766 none peptidase, subfamly M28A unassigned peptidases 21229502;Xanthomonas campestris 85 SO2767 asnB-1 asparagine synthetase B, glutamine-hydrolyzing 9655452;Vibrio cholerae 36 SO2768 none acyl-CoA dehydrogenase family protein 17545192;Ralstonia solanacearum 63 SO2769 none protein with Galactose mutarotase-like domain 9951750;Pseudomonas aeruginosa 120 SO2771 garR 2-hydroxy-3-oxopropionate reductase 15074811;Sinorhizobium meliloti 39 SO2772 none cytosolic long-chain acyl-CoA thioester hydrolase family protein 9658378;Vibrio cholerae 22 SO2774 fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase II 15979639;Yersinia pestis 30 SO2776 fabG-1 3-oxoacyl-(acyl-carrier-protein) reductase 24112499;Shigella flexneri 27 SO2777 fabD malonyl CoA-acyl carrier protein transacylase 9656566;Vibrio cholerae 29 SO2778 fabH-1 3-oxoacyl-(acyl-carrier-protein) synthase III 9656567;Vibrio cholerae 37 SO2779 plsX fatty acid/phospholipid synthesis protein 9656568;Vibrio cholerae 66 SO2785 rne multimodular ribonuclease E 1573386;Haemophilus influenzae 23 SO2788 rrmA ribosomal RNA large subunit methyltransferase A 28898934;Vibrio parahaemolyticus 79 SO2790 sbcB exodeoxyribonuclease I 15979599;Yersinia pestis 68 SO2791 cdd cytidine deaminase 12720488;Pasteurella multocida 74 SO2794 none protein with LuxS/MPP-like metallohydrolase domain 9658439;Vibrio cholerae 49 SO2801 lpxK tetraacyldisaccharide 4'-kinase 1573007;Haemophilus influenzae 81 SO2813 none oxidoreductase, short chain dehydrogenase/reductase family 28869301;Pseudomonas syringae 42 SO2831 ribA GTP cyclohydrolase II 9950243;Pseudomonas aeruginosa 42 SO2833 nrdG anaerobic ribonucleoside-triphosphate reductase activating protein 9657916;Vibrio cholerae 36 SO2834_1 nrdD multimodular: protein of unknown function (N-terminal); anaerobic ribonucleoside- triphosphate reductase (C-terminal) 13622339;Streptococcus pyogenes 120 SO2834_2 nrdD multimodular: protein of unknown function (N-terminal); anaerobic ribonucleoside- triphosphate reductase (C-terminal) 15981378;Yersinia pestis 18 SO2838 none ATP-dependent RNA helicase, DEAD box family 9657444;Vibrio cholerae 50 SO2842 none peptidase, M23/M37 family 9657464;Vibrio cholerae 77 SO2843 none exonuclease SbcC, putative 9657926;Vibrio cholerae 94 SO2844 none exonuclease SbcD, putative 9657925;Vibrio cholerae 72 SO2849 none acetyltransferase, GNAT family 2633367;Bacillus subtilis 95 SO2850 none acetyltransferase, GNAT family 17545716;Ralstonia solanacearum 61 SO2851 none D,D-heptose 1,7-bisphosphate phosphatase 28897482;Vibrio parahaemolyticus 35 SO2853 none 3-oxoacyl-(acyl-carrier-protein) synthase III, putative 9658172;Vibrio cholerae 56 SO2855 none exonuclease 19552509;Corynebacterium glutamicum 101 SO2861 none protein with NAD(P)-binding Rossmann-fold domain 50121505;Erwinia caratovora 106 SO2871 none arsenate reductase, putative 50120197;Erwinia caratovora 49 SO2877 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 50120196;Erwinia caratovora 69 SO2881 SodB superoxide dismutase, Fe 9656592;Vibrio cholerae 21 SO2882 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9656403;Vibrio cholerae 17 SO2887 dsbB disulfide bond formation protein b 28898847;Vibrio parahaemolyticus 94 SO2895 pdxH pyridoxamine 5'-phosphate oxidase 9658525;Vibrio cholerae 35 SO2896 ligA DNA ligase, NAD-dependent 9655431;Vibrio cholerae 42 SO2899 cysZ cysZ protein 15980947;Yersinia pestis 57 SO2901 fabH-2 3-oxoacyl-(acyl-carrier-protein) synthase III 34496551;Chromobacterium violaceum 54 SO2903 cysK cysteine synthase A 9655428;Vibrio cholerae 22 SO2905 none O-methyltransferase, putative 12518138;Escherichia coli O157:H7 EDL933 69 SO2912 pflB formate acetyltransferase 9656396;Vibrio cholerae 18 PMID:2248795 SO2913 pflA pyruvate formate-lyase 1 activating enzyme 15979430;Yersinia pestis 34 PMID:2248795 SO2915 ackA acetate kinase (2.7.2.1) 9655567;Vibrio cholerae 42 PMID:7883769 SO2916 pta phosphate acetyltransferase (2.3.1.8) 7225861;Neisseria meningitidis 34 PMID:7883769 SO2919 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 28897961;Vibrio parahaemolyticus 80 SO2921 folX D-erythro-7,8-dihydroneopterin triphosphate epimerase 50121968;Erwinia caratovora 33 SO2922 none protein with NAD(P)-binding Rossmann-fold domain 15980756;Yersinia pestis 69 SO2924 none signal peptidase I family protein 17546435;Ralstonia solanacearum 88 SO2928 none acyl-CoA thioesterase I, putative 28869468;Pseudomonas syringae 76 SO2933 none sohB protein, peptidase U7 family 28898806;Vibrio parahaemolyticus 48 SO2934 none hydrolase with alpha/beta-hydrolase domain 9658295;Vibrio cholerae 124 SO2935 none oxidoreductase, short-chain dehydrogenase/reductase family 9655525;Vibrio cholerae 45 SO2964 none ClpP protease family protein 13477031;Mesorhizobium loti 76 SO2976 none protein with nucleoside 2-deoxyribosyltransferase domain 13360977;Escherichia coli O157:H7 94 SO3019 trpE anthranilate synthase component I 28898730;Vibrio parahaemolyticus 55 SO3020 trpG glutamine amido-transferase 28898731;Vibrio parahaemolyticus 57 SO3021 trpD anthranilate phosphoribosyltransferase 28898732;Vibrio parahaemolyticus 58 SO3022_1 trpCF multimodular: indole-3-glycerolphosphate synthetase (N-terminal); N-(5- phosphoribosyl)anthranilate isomerase (C-terminal) 28898733;Vibrio parahaemolyticus 50 SO3022_2 trpCF multimodular: indole-3-glycerolphosphate synthetase (N-terminal); N-(5- phosphoribosyl)anthranilate isomerase (C-terminal) 51245475;Desulfotalea psychrophila 119 SO3023 trpB tryptophan synthase, beta subunit 28898734;Vibrio parahaemolyticus 17 SO3024 trpA tryptophan synthase, alpha subunit 9655645;Vibrio cholerae 39 SO3030 alcA alcaligin biosynthesis enzyme AlcA 15979573;Yersinia pestis 66 SO3031 none alcaligin biosynthesis protein AlcB, putative 33593440;Bordetella pertussis 108 SO3032 none alcaligin biosynthesis protein AlcC, putative 15979581;Yersinia pestis 60 SO3037 xth exodeoxyribonuclease III 28897777;Vibrio parahaemolyticus 31 SO3048 none isoquinoline 1-oxidoreductase, beta subunit, putative 27381330;Bradyrhizobium japonicum 83 SO3049 none isoquinoline 1-oxidoreductase, alpha subunit, putative 16126509;Caulobacter crescentus 57 SO3054 none metallo-beta-lactamase family protein 16125435;Caulobacter crescentus 58 SO3055 pip proline iminopeptidase 21219327;Streptomyces coelicolor 86 SO3057 none Pal/histidase family protein 14523235;Sinorhizobium meliloti 84 SO3061 topB DNA topoisomerase III 1573420;Haemophilus influenzae 50 SO3064 purF amidophosphoribosyltransferase 16761287;Salmonella enterica 29 SO3067 folC bifunctional: folylpolyglutamate synthase; dihydrofolate synthase 15980747;Yersinia pestis 68 SO3070 asd aspartate semialdehyde dehydrogenese 9656657;Vibrio cholerae 36 SO3071 pdxB erythronate-4-phosphate dehydrogenase 9656658;Vibrio cholerae 79 SO3072 fabB 3-oxoacyl-(acyl-carrier-protein) synthase I 28898968;Vibrio parahaemolyticus 26 SO3073 none protein with FAD/NAD(P)-binding domain 26248712;Escherichia coli CFT073 114 SO3075 none RNA methyltransferase, TrmH family, putative 28871068;Pseudomonas syringae 59 SO3077 none protein with Class I glutamine amidotransferase-like domain 9947534;Pseudomonas aeruginosa 85 SO3078.2 none hypothetical chorismate synthase 50121992;Erwinia caratovora 23 SO3079 [aroC] chorismate synthase 0 SO3080 none N5-glutamine methyltransferase 26248718;Escherichia coli CFT073 46 SO3082 sixA phosphohistidine phosphatase SixA 9656617;Vibrio cholerae 87 SO3083 none peptidase, M16 family 9656619;Vibrio cholerae 78 SO3088_1 none multimodular: enoyl-CoA hydratase/isomerase protein (N-terminal); dehydrogenase (C- terminal) 23099575;Oceanobacillus iheyensis 92 SO3088_2 none multimodular: enoyl-CoA hydratase/isomerase protein (N-terminal); dehydrogenase (C- terminal) 9655512;Vibrio cholerae 49 SO3089 none fatty oxidation complex, beta subunit 15980724;Yersinia pestis 30 SO3090 none MoxR domain protein 28870914;Pseudomonas syringae 46 SO3106 aprE cold-active serine alkaline protease 21230325;Xanthomonas campestris 91 SO3108 none bifunctional: 1,3-dimethyluroporphyrinogen III dehydrogenase; siroheme ferrochelatase 15981294;Yersinia pestis 119 SO3113 tgt queuine tRNA-ribosyltransferase 16759383;Salmonella enterica 18 SO3114 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase 28868619;Pseudomonas syringae 33 SO3120 none oxidoreductase, Gfo/Idh/MocA family 34540464;Porphyromonas gingivalis 93 SO3125 none ATP-dependent RNA helicase, DEAD box family 21229902;Xanthomonas campestris 71 SO3126 ogt methylated-DNA--protein-cysteine methyltransferase 9658460;Vibrio cholerae 54 SO3128.2 none hypothetical glutamate tRNA synthetase 1786337;Escherichia coli K12 113 SO3140 none thymidine kinase 15980179;Yersinia pestis 37 SO3142 dcp-1 peptidyl-dipeptidase Dcp 9107042;Xylella fastidiosa 67 SO3148 none protein with metallo-dependent hydrolase domains 21232800;Xanthomonas campestris 120 SO3152 none acetyltransferase, CysE/LacA/LpxA/NodL family 1786537;Escherichia coli K12 88 SO3154 proS prolyl-tRNA synthetase 15979136;Yersinia pestis 31 SO3160 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase 28868292;Pseudomonas syringae 60 SO3161 none glucose-1-phosphate thymidylyltransferase-related protein 0 SO3165 none protein with nucleotidyltransferase domain 30250156;Nitrosomonas europaea 113 SO3166 none protein with nucleotidyltransferase substrate binding subunit domain 30250157;Nitrosomonas europaea 71 SO3167 none dTDP-glucose 4,6-dehydratase 28872504;Pseudomonas syringae 38 SO3171 none multimodular oxidoreductase 28897009;Vibrio parahaemolyticus 29 SO3172 none galactosyl transferase 9654672;Vibrio cholerae 41 SO3173 none UDP-galactose 4-epimerase, putative 9654671;Vibrio cholerae 68 SO3174 none glycosyl transferase, group 1 family protein 33594064;Bordetella pertussis 80 SO3175 asnB-2 asparagine synthetase, putative 51243885;Desulfotalea psychrophila 64 SO3185 none sugar transaminase 15025360;Clostridium acetobutylicum 91 SO3186 rfbA glucose-1-phosphate-thymidylyltransferase 51243896;Desulfotalea psychrophila 30 SO3188 rfbB dTDP-glucose 4,6-dehydratase 24113426;Shigella flexneri 22 SO3189 none polysaccharide biosynthesis protein 51243898;Desulfotalea psychrophila 33 SO3190 none polysaccharide biosynthesis protein 33592713;Bordetella pertussis 28 SO3193 none polysaccharide biosynthesis protein 28896994;Vibrio parahaemolyticus 90 SO3211 flhG flagellar biosynthetic protein FlhG 9656613;Vibrio cholerae 35 SO3212 flhF flagellar biosynthetic protein FlhF 9656614;Vibrio cholerae 71 SO3225 fliI flagellum-specific ATP synthase FliI 9656681;Vibrio cholerae 37 SO3247 flgE flagellar hook protein FlgE 28897552;Vibrio parahaemolyticus 72 SO3262 ilvB acetolactate synthase isozyme I, large subunit 16422469;Salmonella typhimurium 115 SO3263 none 3-oxoacyl-(acyl-carrier-protein) reductase, putative 7227179;Neisseria meningitidis 101 SO3265 none protein with ATP-binding domain 45658117;Leptospira interrogans 113 SO3268 none alpha amylase domain protein 0 SO3269 none cytidylyltransferase domain protein 0 SO3270 none polysaccharide biosynthesis protein 33862369;Prochlorococcus marinus 68 SO3271 none polysaccharide biosynthesis protein 6968727;Campylobacter jejuni 38 SO3287_1 purL multimodular: phosphoribosylformylglycinamidine synthase (N-terminal); protein with glutamine amidotransferase-like domain (C-terminal) 9655322;Vibrio cholerae 35 SO3287_2 purL multimodular: phosphoribosylformylglycinamidine synthase (N-terminal); protein with glutamine amidotransferase-like domain (C-terminal) 1001761;Synechocystis PCC6803 124 SO3291 none cytidine/deoxycytidylate deaminase family protein 28897437;Vibrio parahaemolyticus 48 SO3292_1 guaA multimodular: protein with glutamine amidotransferase-like domain (N-terminal); GMP synthase (C-terminal) 4376440;Chlamydophila pneumoniae 93 SO3292_2 guaA multimodular: protein with glutamine amidotransferase-like domain (N-terminal); GMP synthase (C-terminal) 15980837;Yersinia pestis 11 SO3293 guaB inosine-5'-monophosphate dehydrogenase 26248869;Escherichia coli CFT073 23 SO3294 xseA exodeoxyribonuclease VII, large subunit 28897389;Vibrio parahaemolyticus 63 SO3299 none Pal/histidase family protein 14523235;Sinorhizobium meliloti 124 SO3303 none chitinase domain protein 0 SO3309 none PQQ enzyme repeat domain protein 15980843;Yersinia pestis 94 SO3311 hisS histidyl-tRNA synthetase 9655206;Vibrio cholerae 37 SO3312 ispG 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 9655205;Vibrio cholerae 12 SO3315 none pyruvate formate lyase activating enzyme 26248881;Escherichia coli CFT073 27 SO3317 none 5'-nucleotidase, putative 9657952;Vibrio cholerae 91 SO3323 none acetyltransferase, GNAT family 24111724;Shigella flexneri 99 SO3338 ybjU L-allo-threonine aldolase 9658188;Vibrio cholerae 42 SO3341 none antioxidant, AhpC/TSA family 6968225;Campylobacter jejuni 71 SO3348 hemH-2 ferrochelatase 9655448;Vibrio cholerae 71 SO3352 none protein with PLP-binding barrel domain 12720324;Pasteurella multocida 50 SO3354 proC pyrroline-5-carboxylate reductase 9654885;Vibrio cholerae 57 SO3358 none dITP/dXTP pyrophosphatase 28899395;Vibrio parahaemolyticus 49 SO3359 none oxygen-independent coproporphyrinogen III oxidase, putative 9654880;Vibrio cholerae 53 SO3365 glsA glutaminase A 28899397;Vibrio parahaemolyticus 40 SO3367 none tRNA methyltransferase 9654878;Vibrio cholerae 39 SO3368 mutY A/G-specific adenine glycosylase 12721682;Pasteurella multocida 52 SO3379 cfa cyclopropane-fatty-acyl-phospholipid synthase 9655593;Vibrio cholerae 64 SO3381 none protein with FAD/NAD(P)-binding domain 28897895;Vibrio parahaemolyticus 51 SO3382 none oxidoreductase, short-chain dehydrogenase/reductase family 51245999;Desulfotalea psychrophila 80 SO3384 phrB deoxyribodipyrimidine photolyase 9657440;Vibrio cholerae 76 SO3388 none ATP-dependent RNA helicase, DEAD box family 9658191;Vibrio cholerae 63 SO3391 none ATP-dependent protease, putative 9658415;Vibrio cholerae 41 SO3392 none N-ethylmaleimide reductase 9658440;Vibrio cholerae 30 SO3413 thrC threonine synthase 1573038;Haemophilus influenzae 54 SO3414 thrB homoserine kinase 50122811;Erwinia caratovora 64 SO3415_1 thrA multimodular: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal) 9656933;Vibrio cholerae 61 SO3415_2 thrA multimodular: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal) 19113110;Schizosaccharomyces pombe 115 SO3417 slyD peptidyl-prolyl cis-trans isomerase SlyD 50122974;Erwinia caratovora 71 SO3417.1 none peptidyl-prolyl cis-trans isomerase SlyD 0 SO3423 holC DNA polymerase III, chi subunit 1574233;Haemophilus influenzae 100 SO3424 valS valyl-tRNA synthetase 9657085;Vibrio cholerae 32 SO3427 none aspartokinase 9654975;Vibrio cholerae 48 SO3428 alaS alanyl-tRNA synthetase 12517136;Escherichia coli O157:H7 EDL933 37 SO3430 recA recA protein 50122291;Erwinia caratovora 9 SO3431 mutS DNA mismatch repair protein MutS 26249133;Escherichia coli CFT073 40 SO3434 pcm protein-L-isoaspartate O-methyltransferase 15981284;Yersinia pestis 50 SO3436 none pseudoruidine synthase 1789102;Escherichia coli K12 91 SO3437 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 15981287;Yersinia pestis 35 SO3438 ispD 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 24114042;Shigella flexneri 63 SO3440 eno enolase (4.2.1.11) 9949794;Pseudomonas aeruginosa 19 PMID:4942326 SO3441 pyrG CTP synthase 28899336;Vibrio parahaemolyticus 23 SO3455 relA GTP pyrophosphokinase 26249185;Escherichia coli CFT073 47 SO3456 none RNA methyltransferase, TrmA family 28899340;Vibrio parahaemolyticus 83 SO3462 recN DNA repair protein RecN 28897422;Vibrio parahaemolyticus 53 SO3463 pgpA phosphatidylglycerophosphatase A 9656827;Vibrio cholerae 63 SO3464 thiL thiamin-monophosphate kinase 26246423;Escherichia coli CFT073 57 SO3466 ribH riboflavin synthase, beta subunit 28897456;Vibrio parahaemolyticus 29 SO3467_1 ribBA multimodular: 3,4-dihydroxy-2-butanone 4-phosphate synthase (N-terminal); GTP cyclohydrolase II (C-terminal) 28897455;Vibrio parahaemolyticus 17 SO3467_2 ribBA multimodular: 3,4-dihydroxy-2-butanone 4-phosphate synthase (N-terminal); GTP cyclohydrolase II (C-terminal) 9656831;Vibrio cholerae 47 SO3468 ribE-2 riboflavin synthase, alpha subunit 28867919;Pseudomonas syringae 49 SO3469_1 ribD multimodular: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5- amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) 10039124;Buchnera sp. APS 64 SO3469_2 ribD multimodular: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5- amino-6-(5-phosphoribosylamino) uracil reductase (C-terminal) 9656833;Vibrio cholerae 91 SO3471 glyA serine hydroxymethyltransferase (2.1.2.1) 16761468;Salmonella enterica 18 PMID:6190704 SO3474 none metallo-beta-lactamase family protein 28869641;Pseudomonas syringae 63 SO3496 none aldehyde dehydrogenase 9951629;Pseudomonas aeruginosa 29 SO3497 none putrescine aminotransferase 9951630;Pseudomonas aeruginosa 35 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase 9106487;Xylella fastidiosa 71 SO3506 none SIS domain protein 16124790;Caulobacter crescentus 80 SO3507 none protein with actin-like ATPase domain 50122675;Erwinia caratovora 125 SO3509 hex beta-hexosaminidase b precursor 9656775;Vibrio cholerae 91 SO3513 none tryptophan halogenase, putative 16125254;Caulobacter crescentus 125 SO3517 ndh NADH dehydrogenase 9656422;Vibrio cholerae 86 SO3529 lytB 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein 28897311;Vibrio parahaemolyticus 34 SO3530 fkbP-2 peptidyl-prolyl cis-trans isomerase FkbP 9655123;Vibrio cholerae 62 SO3531 lspA lipoprotein signal peptidase 15978569;Yersinia pestis 68 SO3532 ileS isoleucyl-tRNA synthetase 26245947;Escherichia coli CFT073 36 SO3533 ribF bifunctional: flavokinase; FAD synthetase 28897307;Vibrio parahaemolyticus 50 SO3539 none peptidase, M20/M25/M40 family 21232586;Xanthomonas campestris 72 SO3546 tal transaldolase (2.2.1.2) 24111458;Shigella flexneri 33 PMID:7592346 SO3547 pgi glucose-6-phosphate isomerase (5.3.1.9) 28868179;Pseudomonas syringae 61 PMID:2549364 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit 1574461;Haemophilus influenzae 31 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit 15981030;Yersinia pestis 67 SO3559 gshA glutamate--cysteine ligase 24113990;Shigella flexneri 56 SO3560_1 none multimodular peptidase 9654983;Vibrio cholerae 61 SO3560_2 none multimodular peptidase 28899314;Vibrio parahaemolyticus 94 SO3564 dcp-2 peptidyl-dipeptidase Dcp 21229708;Xanthomonas campestris 68 SO3565 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase 16422965;Salmonella typhimurium 55 SO3575 none CDP-diacylglycerol--serine O-phosphatidyltransferase, putative 21230116;Xanthomonas campestris 45 SO3585 none azoreductase, putative 45655605;Leptospira interrogans 95 SO3598 cysM cysteine synthase B 9654964;Vibrio cholerae 23 SO3611 none ATPase, AAA family 9946534;Pseudomonas aeruginosa 74 SO3613 purT phosphoribosylglycinamide formyltransferase 2 9949920;Pseudomonas aeruginosa 33 SO3631 hprA glycerate dehydrogenase (1.1.1.29) 29346617;Bacteroides thetaiotaomicron 72 PMID:1657886,1729225 SO3634 none nucleotidyltransferase family protein 33594219;Bordetella pertussis 58 SO3635 none protein with protein kinase-like (PK-like) domain 30248215;Nitrosomonas europaea 101 SO3637 surA peptidyl-prolyl cis-trans isomerase 9654869;Vibrio cholerae 80 SO3638 pdxA pyridoxal phosphate biosynthetic protein PdxA 50122779;Erwinia caratovora 42 SO3639 ksgA dimethyladenosine transferase 28897110;Vibrio parahaemolyticus 43 SO3641 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 50122782;Erwinia caratovora 82 SO3646 folA dihydrofolate reductase 9654864;Vibrio cholerae 44 SO3653 ispB octaprenyl-diphosphate synthase 15981437;Yersinia pestis 41 SO3654 ung uracil-DNA glycosylase 9656928;Vibrio cholerae 50 SO3664 fadD-2 long-chain-fatty-acid--CoA ligase 9949428;Pseudomonas aeruginosa 71 SO3678 none protein with FAD/NAD(P)-binding domain 9949563;Pseudomonas aeruginosa 85 SO3683 none coniferyl aldehyde dehydrogenase 9658513;Vibrio cholerae 62 SO3695 pyrC dihydroorotase, homodimeric type 9658362;Vibrio cholerae 29 SO3705 none 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase, putative 30022449;Bacillus cereus 125 SO3711 none hydrolase with alpha/beta-hydrolase domain 16126929;Caulobacter crescentus 95 SO3715 none oxygen-insensitive NAD(P)H nitroreductase 34497699;Chromobacterium violaceum 43 SO3718 none thiol:disulfide interchange protein, DsbA family 28899828;Vibrio parahaemolyticus 124 SO3720 none protoporphyrin flavoprotein oxidase 50119172;Erwinia caratovora 74 SO3723 cysC adenylylsulfate kinase 28897070;Vibrio parahaemolyticus 39 SO3726 cysN sulfate adenylyltransferase, subunit 1 9657144;Vibrio cholerae 45 SO3727 cysD sulfate adenylyltransferase, subunit 2 9657145;Vibrio cholerae 21 SO3728 cobA uroporphyrin-III C-methyltransferase 50122465;Erwinia caratovora 60 SO3735 mtgA monofunctional biosynthetic peptidoglycan transglycosylase 13363560;Escherichia coli O157:H7 51 SO3736 cysH phosphoadenosine phosphosulfate reductase 9654805;Vibrio cholerae 38 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component 26249161;Escherichia coli CFT073 55 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component 28899496;Vibrio parahaemolyticus 63 SO3740 pntA NAD(P) transhydrogenase, alpha subunit 1787887;Escherichia coli K12 28 SO3741 pntB NAD(P) transhydrogenase, beta subunit 16760383;Salmonella enterica 18 SO3745_1 rfaE multimodular: ADP-heptose synthase (N-terminal); protein with nucleotidylyl transferase domain (C-terminal) 16761974;Salmonella enterica 50 SO3745_2 rfaE multimodular: ADP-heptose synthase (N-terminal); protein with nucleotidylyl transferase domain (C-terminal) 21673050;Chlorobaculum tepidum 61 SO3746 htrB lipid A biosynthesis lauroyl acyltransferase 12721198;Pasteurella multocida 82 SO3756 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9950672;Pseudomonas aeruginosa 69 SO3760 glnE multimodular glutamate-ammonia-ligase adenylyltransferase: deadenlylylase (N-terminal); adenylylase (C-terminal) 15978743;Yersinia pestis 64 SO3763 none multimodular: protein of unknown function (N-terminal); methyltransferase with S- adenosyl-L-methionine-dependent methyltransferase 30023245;Bacillus cereus 95 SO3774 none multimodular: proline dehydrogenase (N-terminal); delta-1-pyrroline-5-carboxylate dehydrogenase (C-terminal) 9946672;Pseudomonas aeruginosa 52 SO3777 none protein with putative DNA-binding domain 0 SO3778 none adenylate cyclase CyaB, putative 28898534;Vibrio parahaemolyticus 67 SO3783 none ATP-dependent RNA helicase, DEAD box family 51244788;Desulfotalea psychrophila 34 SO3789 none selenocysteine lyase 10176092;Bacillus halodurans 74 SO3792 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9946677;Pseudomonas aeruginosa 59 SO3797 none peptidase, U32 family 26247720;Escherichia coli CFT073 68 SO3800 none serine protease, subtilase family 42522960;Bdellovibrio bacteriovorus 117 SO3803 hpt-2 hypoxanthine phosphoribosyltransferase 50122250;Erwinia caratovora 43 SO3804 ubiX phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative 9657125;Vibrio cholerae 32 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 26251138;Escherichia coli CFT073 45 SO3812 ppiA peptidyl-prolyl cis-trans isomerase A 12721266;Pasteurella multocida 68 SO3817 panE 2-dehydropantoate 2-reductase 9656872;Vibrio cholerae 96

SO3827 kdsA 2-dehydro-3-deoxyphosphooctonate aldolase 28868759;Pseudomonas syringae 27 SO3831 none acetyltransferase, GNAT family 14973005;Streptococcus pneumoniae 75 SO3832 none N5-glutamine methyltransferase 16420305;Salmonella typhimurium 70 SO3834 hemA glutamyl-tRNA reductase 28897516;Vibrio parahaemolyticus 49 SO3836 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 9656736;Vibrio cholerae 61 SO3837 prsA ribose-phosphate pyrophosphokinase 12720472;Pasteurella multocida 16 SO3844 none peptidase, M13 family 34497442;Chromobacterium violaceum 77 SO3855 sfcA malate oxidoreductase 9655665;Vibrio cholerae 28 PMID:6360216 SO3859 none multimodular: protein with TPR-like domain (N-terminal); cyclic nucleotide phosphodiesterase (C-terminal) 34497042;Chromobacterium violaceum 98 SO3870 none disulfide bond formation protein 26249618;Escherichia coli CFT073 105 SO3871 none thiol:disulfide interchange protein, DsbA family 16761967;Salmonella enterica 93 SO3872_1 none multimodular arylsulfate sulfotransferase 16421747;Salmonella typhimurium 70 SO3872_2 none multimodular arylsulfate sulfotransferase 16421748;Salmonella typhimurium 39 SO3883 none hypothetical protein 0 SO3895 none HesA/MoeB/ThiF family protein 15979093;Yersinia pestis 46 SO3897 parC DNA topoisomerase IV, A subunit 28897205;Vibrio parahaemolyticus 33 SO3898 none L-sorbosone dehydrogenase, putative 39995303;Geobacter sulfurreducens 94 SO3899 parE DNA topoisomerase IV, B subunit 9657006;Vibrio cholerae 26 SO3900 none hydrolase with alpha/beta-hydrolase domain 9657008;Vibrio cholerae 82 SO3901 icc cyclic 3',5'-adenosine monophosphate phosphodiesterase 26249609;Escherichia coli CFT073 84 SO3903 none adenosine diphosphate sugar pyrophosphatase (Nudix hydrolase) 26249611;Escherichia coli CFT073 65 SO3908 none enoyl-CoA hydratase/isomerase family protein 17545195;Ralstonia solanacearum 89 SO3912 none tRNA-dihydrouridine synthase 9654797;Vibrio cholerae 31 SO3913 none protein with ferritin-like domain 9950756;Pseudomonas aeruginosa 61 SO3916 alr alanine racemase, biosynthetic 28899508;Vibrio parahaemolyticus 51 SO3917 dnaB replicative DNA helicase 50122585;Erwinia caratovora 25 SO3918 none dipeptidyl-peptidase 7 9106978;Xylella fastidiosa 87 SO3920 hydA periplasmic Fe hydrogenase, large subunit 46580179;Desulfovibrio vulgaris 76 SO3921 hydB periplasmic Fe hydrogenase, small subunit 46580180;Desulfovibrio vulgaris 121 SO3923 none thiH protein, putative 51244328;Desulfotalea psychrophila 59 SO3925 none biotin synthase family protein 51244327;Desulfotalea psychrophila 89 SO3926 none GTP-binding protein 15024610;Clostridium acetobutylicum 80 SO3934 none RNA methyltransferase, TrmH family, group 3 28899580;Vibrio parahaemolyticus 40 SO3935 vacB ribonuclease R 1573876;Haemophilus influenzae 51 SO3937 purA adenylosuccinate synthetase 9657190;Vibrio cholerae 27 SO3941 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9950672;Pseudomonas aeruginosa 54 SO3942 none serine protease, HtrA/DegQ/DegS family 50119263;Erwinia caratovora 51 SO3943 degS protease DegS 24114522;Shigella flexneri 66 SO3948 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase 26249773;Escherichia coli CFT073 44 SO3956 none D-arabinose 5-phosphate isomerase 9657107;Vibrio cholerae 43 SO3957 none 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, KDO biosynthesis 15981500;Yersinia pestis 57 SO3964 none nucleotidase with P-loop containing nucleoside triphosphate hydrolase domain 9657115;Vibrio cholerae 63 SO3986 lysC aspartokinase III, lysine-sensitive 26250802;Escherichia coli CFT073 52 SO3990 none dipeptidyl peptidase IV 21233383;Xanthomonas campestris 85 SO3991 fbp fructose-1,6-bisphosphatase 21229574;Xanthomonas campestris 52 SO4016 none protein with L-domian-like and protein kinase-like domains 28898759;Vibrio parahaemolyticus 60 SO4017 none murein transglycosylase 28868586;Pseudomonas syringae 97 SO4030 uvrA excinuclease ABC, A subunit 9654814;Vibrio cholerae 22 SO4032 none peptidase, subfamly M28A unassigned peptidases 16126741;Caulobacter crescentus 116 SO4034 deaD ATP-dependent RNA helicase DeaD 9105065;Xylella fastidiosa 61 SO4039 none hydrolase, haloacid dehalogenase-like family 9950128;Pseudomonas aeruginosa 112 SO4054 metF 5,10-methylenetetrahydrofolate reductase 7226181;Neisseria meningitidis 30 SO4055_1 metL multimodular: aspartokinase II (N-terminal); homoserine dehydrogenase (C-terminal), methionine sensistive 16762335;Salmonella enterica 89 SO4055_2 metL multimodular: aspartokinase II (N-terminal); homoserine dehydrogenase (C-terminal), methionine sensistive 6322599;Saccharomyces cerevisiae 105 SO4056 metB cystathionine gamma-synthase 21232287;Xanthomonas campestris 45 SO4060 psrC polysulfide reductase, subunit C 34556568;Wolinella succinogenes 88 SO4061 psrB polysulfide reductase, subunit B 34556567;Wolinella succinogenes 47 SO4062 psrA polysulfide reductase, subunit A 16760996;Salmonella enterica 61 SO4066 none phosphoribosylaminoimidazole-succinocarboxamide synthase, putative 9655668;Vibrio cholerae 24 SO4069 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9950387;Pseudomonas aeruginosa 46 SO4072 yliG methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 50121632;Erwinia caratovora 32 SO4078 pmbA microsin-processing peptidase, family U62 9657118;Vibrio cholerae 51 SO4085 chiA chitinase A 12724991;Lactococcus lactis 59 SO4092 none hydrolase, carbon-nitrogen family 16125081;Caulobacter crescentus 80 SO4094 cafA ribonuclease G 9654841;Vibrio cholerae 30 SO4118 none malate oxidoreductase, putative 28899541;Vibrio parahaemolyticus 27 SO4123 argS arginyl-tRNA synthetase 28872251;Pseudomonas syringae 43 SO4133 udp uridine phosphorylase 15981699;Yersinia pestis 27 SO4136 none decarboxylase, pyridoxal-dependent 28871704;Pseudomonas syringae 30 SO4141 none oxidoreductase, short-chain dehydrogenase/reductase family 9658502;Vibrio cholerae 36 SO4149 none multimodular RTX toxin 27378674;Bradyrhizobium japonicum 99 SO4151 none polysaccharide deacetylase family protein 34498264;Chromobacterium violaceum 50 SO4153 none N-ethylmaleimide reductase, putative 9658435;Vibrio cholerae 33 SO4162 hslV ATP-dependent protease HslV 9657269;Vibrio cholerae 17 SO4163 hslU heat shock protein HslVU, ATPase subunit HslU 15978214;Yersinia pestis 22 SO4170 none C-factor, putative 9656340;Vibrio cholerae 53 SO4174 none NAD dependent epimerase/dehydratase family protein 6460559;Deinococcus radiodurans 102 SO4190 ppaC inorganic pyrophosphatase, manganese-dependent 46580047;Desulfovibrio vulgaris 56 SO4193 none hydrolase with alpha/beta-hydrolase domain 9655031;Vibrio cholerae 66 SO4194 none protein with UDP-Glycosyltransferase/glycogen phosphorylase domain 28897123;Vibrio parahaemolyticus 81 SO4197 menG_2 regulator of RNase E 9657265;Vibrio cholerae 32 SO4199 ubiE bifunctional: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; S-adenosylmethionine:2- DMK methyltransferase 9654480;Vibrio cholerae 30 SO4201 aarF 2-octaprenylphenol hydroxylase, ubiquinone biosynthetic pathway 12722096;Pasteurella multocida 50 SO4206 none hydrolase, TatD family 24115135;Shigella flexneri 75 SO4208 hemB-2 delta-aminolevulinic acid dehydratase 9654504;Vibrio cholerae 25

SO4212 none peptidase, M23/M37 family 9950636;Pseudomonas aeruginosa 89 SO4214 lpxC UDP-3-0-acyl N-acetylglucosamine deacetylase 9656969;Vibrio cholerae 42 SO4218 murC UDP-N-acetylmuramate--alanine ligase 9656973;Vibrio cholerae 35 SO4219 murG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 15978647;Yersinia pestis 58 SO4221 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase 26246021;Escherichia coli CFT073 77 SO4222 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase 50122740;Erwinia caratovora 30 SO4223 murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 50122741;Erwinia caratovora 76 SO4224 murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 12720352;Pasteurella multocida 76 SO4225 ftsI peptidoglycan synthetase FtsI 28897228;Vibrio parahaemolyticus 67 SO4227 none methyltransferase 15978639;Yersinia pestis 41 SO4230 glpK glycerol kinase (2.7.1.30) 26250692;Escherichia coli CFT073 33 PMID:4914079 SO4233 leuD 3-isopropylmalate dehydratase, small subunit 12722396;Pasteurella multocida 47 SO4234 leuC 3-isopropylmalate dehydratase, large subunit 9657072;Vibrio cholerae 32 SO4235 leuB 3-isopropylmalate dehydrogenase 9657071;Vibrio cholerae 35 SO4236 leuA 2-isopropylmalate synthase 9657070;Vibrio cholerae 32 SO4241 recQ ATP-dependent DNA helicase RecQ 28899781;Vibrio parahaemolyticus 52 SO4242 none protein with thioesterase/thiol ester dehydrase-isomerase domain 16762178;Salmonella enterica 77 SO4245 argA multimodular: protein with carbamate kinase-like domain (N-terminal); amino-acid acetyltransferase (C-terminal) 1789181;Escherichia coli K12 42 SO4248 radC DNA repair protein RadC 9654937;Vibrio cholerae 48 SO4249_1 dfp multimodular: 4'-phosphopantothenoylcysteine decarboxylase (N-terminal); phosphopantothenoylcysteine synthetase (C-terminal) 9654622;Vibrio cholerae 40 SO4249_2 dfp multimodular: 4'-phosphopantothenoylcysteine decarboxylase (N-terminal); phosphopantothenoylcysteine synthetase (C-terminal) 28896955;Vibrio parahaemolyticus 40 SO4250 dut deoxyuridine 5'-triphosphate nucleotidohydrolase 1573979;Haemophilus influenzae 32 SO4254 folE GTP cyclohydrolase I 9658028;Vibrio cholerae 22 SO4255 pyrE orotate phosphoribosyltransferase 9654618;Vibrio cholerae 20 SO4256 rph ribonuclease PH 1790074;Escherichia coli K12 27 SO4264 hsdS-2 type I restriction-modification system, S subunit 16423091;Salmonella typhimurium 81 SO4265 hsdM-2 type I restriction-modification system, M subunit 1790808;Escherichia coli K12 59 SO4267 hsdR-2 type I restriction-modification system, R subunit 16763332;Salmonella enterica 95 SO4274 none undecaprenyl pyrophosphate phosphatase 33592946;Bordetella pertussis 58 SO4295 none NAD(P)H dehydrogenase (quinone) 9657195;Vibrio cholerae 98 SO4297 none uridine phosphorylase, putative 9657521;Vibrio cholerae 57 SO4299 cat chloramphenicol acetyltransferase 9946589;Pseudomonas aeruginosa 30 SO4305 none hydrolase, haloacid dehalogenase-like family 15981757;Yersinia pestis 108 SO4308 dapF diaminopimelate epimerase 9654526;Vibrio cholerae 39 SO4309 lysA diaminopimelate decarboxylase 9654525;Vibrio cholerae 40 SO4313 hemC porphobilinogen deaminase 28899762;Vibrio parahaemolyticus 36 SO4315 hemX uroporphyrin-III C-methyltransferase 15981766;Yersinia pestis 94 SO4325 rep ATP-dependent DNA helicase Rep 9654570;Vibrio cholerae 36 SO4335 none phosphatidylglycerophosphatase B, putative 1573171;Haemophilus influenzae 119 SO4343 none aminotransferase, class V (2.6.1.45) 28899488;Vibrio parahaemolyticus 29 PMID:8144463 SO4344 ilvA threonine dehydratase 15981809;Yersinia pestis 52 SO4345 ilvD dihydroxy-acid dehydratase 12722025;Pasteurella multocida 22 SO4347 ilvG acetolactate synthase II, large subunit 15981813;Yersinia pestis 43 SO4349 ilvC ketol-acid reductoisomerase 51244578;Desulfotalea psychrophila 28 SO4357 dmsB-2 anaerobic dimethyl sulfoxide reductase, B subunit 16422868;Salmonella typhimurium 62 SO4358 dmaA-2 anaerobic dimethyl sulfoxide reductase, A subunit 28898221;Vibrio parahaemolyticus 108

SO4364 recG ATP-dependent DNA helicase RecG 13364002;Escherichia coli O157:H7 42 SO4367 none acyltransferase family protein 28872205;Pseudomonas syringae 110 SO4371 none protein with firefly luciferase-like ATPase domain 28872209;Pseudomonas syringae 100 SO4372 none thioester dehydrase family protein 50123416;Erwinia caratovora 106 SO4373_1 none multimodular: glycosyltransferase (N-terminal); protein of unknown function (C-terminal) 28872210;Pseudomonas syringae 74 SO4373_2 none multimodular: glycosyltransferase (N-terminal); protein of unknown function (C-terminal) 28897664;Vibrio parahaemolyticus 88 SO4374 none histidine ammonia-lyase, putative 28897663;Vibrio parahaemolyticus 43 SO4375 none protein with thioesterase/thiol ester dehydrase-isomerase domain 26247072;Escherichia coli CFT073 57 SO4378 none FAD-binding protein 28897674;Vibrio parahaemolyticus 46 SO4380 none 3-oxoacyl-(acyl-carrier-protein) synthase II, putative 28897658;Vibrio parahaemolyticus 67 SO4381 none thioester dehydrase family protein 28897657;Vibrio parahaemolyticus 114 SO4382 fabG-2 3-oxoacyl-(acyl-carrier-protein) reductase 50123408;Erwinia caratovora 43 SO4383 fabF-2 3-oxoacyl-(acyl-carrier-protein) synthase II 50123407;Erwinia caratovora 44 SO4393 none acetyltransferase, GNAT family 2635298;Bacillus subtilis 58 SO4394 pspE-2 phage shock protein E 9657486;Vibrio cholerae 111 SO4396 acpD acyl carrier protein phosphodiesterase 24113154;Shigella flexneri 45 SO4397 none protein with thioesterase/thiol ester dehydrase-isomerase domain 15978147;Yersinia pestis 96 SO4398 none D-Tyr-tRNA(Tyr) deacylase 16762406;Salmonella enterica 40 SO4400 none proline iminopeptidase, putative 27381851;Bradyrhizobium japonicum 115 SO4401 rbn ribonuclease BN 28896899;Vibrio parahaemolyticus 55 SO4405 katG-2 catalase/peroxidase HPI 1653058;Synechocystis PCC6803 25 SO4410 glnA glutamine synthetase, type I 9657345;Vibrio cholerae 18 SO4418 none trypanothione synthetase domain protein 15024474;Clostridium acetobutylicum 105 SO4420 none peptidase, M23/M37 family 9951891;Pseudomonas aeruginosa 68 SO4451 moaC molybdenum cofactor biosynthesis protein C 50121739;Erwinia caratovora 21 SO4452 moaA molybdenum cofactor biosynthesis protein A 28898870;Vibrio parahaemolyticus 50 SO4453 none multimodular electron transfer flavoprotein-ubiquinone oxidoreductase: cofactor binding proteins 9949050;Pseudomonas aeruginosa 43 SO4456 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 16422621;Salmonella typhimurium 90 SO4463 none prolyl 4-hydroxylase, alpha subunit domain protein 0 SO4469 none alcohol dehydrogenase, iron-containing 51245231;Desulfotalea psychrophila 51 SO4471 ntrB nitrogen regulation protein 9657347;Vibrio cholerae 62 SO4480 aldA aldehyde dehydrogenase 28898477;Vibrio parahaemolyticus 24 SO4506 none iron-sulfur cluster-binding protein 9656020;Vibrio cholerae 96 SO4509 none formate dehydrogenase, alpha subunit (1.2.1.2) 28898287;Vibrio parahaemolyticus 40 PMID:1650339 SO4510 fdhB-1 formate dehydrogenase, iron-sulfur subunit (1.2.1.2) 9656016;Vibrio cholerae 19 PMID:1650339 SO4511 none formate dehydrogenase, C subunit, putative (1.2.1.2) 9656015;Vibrio cholerae 118 PMID:1650339 SO4513 none formate dehydrogenase, alpha subunit (1.2.1.2) 28898287;Vibrio parahaemolyticus 39 PMID:1650339 SO4514 fdhB-2 formate dehydrogenase, iron-sulfur subunit (1.2.1.2) 28898288;Vibrio parahaemolyticus 19 PMID:1650339 SO4520 none oxygen-independent coproporphyrinogen III oxidase, putative 34556564;Wolinella succinogenes 78 SO4529 none RNA methyltransferase, TrmH family, group 2 50123235;Erwinia caratovora 34 SO4539 none multimodular: serine protease (N-terminal); protein of unknown function (C-terminal) 10176387;Bacillus halodurans 124 SO4543 none hydrolase with alpha/beta-hydrolase domain 23100832;Oceanobacillus iheyensis 121 SO4550 none methyltransferase domain protein 9654513;Vibrio cholerae 85 SO4568 nrfD-2 formate-dependent nitrite reductase, nrfD protein 28898700;Vibrio parahaemolyticus 79 SO4573 menD bifunctional: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2- oxoglutarate decarboxylase 9656515;Vibrio cholerae 93 SO4574 none hydrolase, alpha/beta fold family 12720260;Pasteurella multocida 116 SO4575 menC O-succinylbenzoate-CoA synthase 13362619;Escherichia coli O157:H7 104 SO4576 none O-succinylbenzoic acid--CoA ligase, putative 21674661;Chlorobaculum tepidum 109 SO4587 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 50123267;Erwinia caratovora 59 SO4590 none isochorismatase family protein 28898768;Vibrio parahaemolyticus 73 SO4602 plsB glycerol-3-phosphate acyltransferase 9654491;Vibrio cholerae 70 SO4606 coxB- cytochrome c oxidase, subunit II 9945932;Pseudomonas aeruginosa 53 SO4608 coxG cytochrome c oxidase assembly protein coxG 9945934;Pseudomonas aeruginosa 78 SO4614 ctaB protoheme IX farnesyltransferase 9945940;Pseudomonas aeruginosa 57 SO4616 none polysaccharide deacetylase family protein 15981331;Yersinia pestis 114 SO4618 none prolyl oligopeptidase family protein 16125300;Caulobacter crescentus 105 SO4620 ifcA-2 fumarate reductase, flavoprotein subunit precursor 12724085;Lactococcus lactis 105 SO4626 bioH carboxylesterase in pimeloyl-CoA (biotin precursor) synthesis 24114679;Shigella flexneri 78 SO4628 none sulfatase 12722091;Pasteurella multocida 50 SO4640 none antioxidant, AhpC/Tsa family 9655843;Vibrio cholerae 23 SO4658 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 28896847;Vibrio parahaemolyticus 30 SO4660 none transglycosylase SLT domain protein 2633511;Bacillus subtilis 55 SO4667 engB GTP-binding protein EngB 12721898;Pasteurella multocida 31 SO4669_1 polA multimodular DNA polymerase I 10039095;Buchnera sp. APS 95 SO4669_2 polA multimodular DNA polymerase I 28896881;Vibrio parahaemolyticus 40 SO4671 glpG peptidase, family S54 unassigned peptidases 9654498;Vibrio cholerae 93 SO4672 glpE thiosulfate:cyanide sulfurtransferase 9654499;Vibrio cholerae 66 SO4673 tdh threonine 3-dehydrogenase 9658319;Vibrio cholerae 13 SO4674 kbl 2-amino-3-ketobutyrate coenzyme A ligase 9658320;Vibrio cholerae 27 SO4676 kdtA 3-deoxy-D-manno-octulosonic-acid transferase 28872092;Pseudomonas syringae 76 SO4677 none protein with protein kinase-like (PK-like) domain 3212190;Haemophilus influenzae 96 SO4678 none heptosyl transferase, glycosyltransferase family 9 protein 9654633;Vibrio cholerae 77 SO4679 none glycosyl transferase, group 1 family protein 16422287;Salmonella typhimurium 119 SO4680 none protein with UDP-Glycosyltransferase/glycogen phosphorylase domain 9107106;Xylella fastidiosa 82 SO4682 none glycosyl transferase, group 1 family protein 22297786;Thermosynechococcus elongatus 117 SO4684 coaD phosphopantetheine adenylyltransferase 9946214;Pseudomonas aeruginosa 36 SO4686 none NAD dependent epimerase/dehydratase family protein 39997339;Geobacter sulfurreducens 48 SO4687 ugd UDP-glucose 6-dehydrogenase 28897010;Vibrio parahaemolyticus 35 SO4688 none glycosyl transferase, group 2 family protein 28898796;Vibrio parahaemolyticus 57 SO4696 none protein with DNA-glycosylase domain 28898210;Vibrio parahaemolyticus 77 SO4697 gst glutathione S-transferase 13473240;Mesorhizobium loti 119 SO4699 prlC oligopeptidase A 28896844;Vibrio parahaemolyticus 39 SO4702 gor glutathione reductase 28896842;Vibrio parahaemolyticus 30 SO4706 none malate synthase domain protein 9658395;Vibrio cholerae 75 SO4713 none menaquinone-specific isochorismate synthase, putative 9656516;Vibrio cholerae 108 SO4716 none acetyltransferase, GNAT family 28896879;Vibrio parahaemolyticus 72 SO4722 mobA molybdopterin-guanine dinucleotide biosynthesis protein 1573858;Haemophilus influenzae 76 SO4723_1 none multimodular molybdopterin biosynthesis protein 27377422;Bradyrhizobium japonicum 70 SO4723_2 none multimodular molybdopterin biosynthesis protein 28898270;Vibrio parahaemolyticus 62 SO4724 none molybdenum cofactor biosynthesis protein A, putative 28869709;Pseudomonas syringae 59 SO4726 mutM formamidopyrimidine-DNA glycosylase 28896963;Vibrio parahaemolyticus 56 SO4727 none methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain 9654513;Vibrio cholerae 110 SO4730 hemN oxygen-independent coproporphyrinogen III oxidase 1790298;Escherichia coli K12 44 SO4731 add adenosine deaminase 9657350;Vibrio cholerae 44 SO4733 lypA lysophospholipase L2 9654536;Vibrio cholerae 99 SO4739 menB naphthoate synthase 42524845;Bdellovibrio bacteriovorus 27 SO4741 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 28897133;Vibrio parahaemolyticus 35 SO4745_1 glmU multimodular: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) 15982008;Yersinia pestis 48 SO4745_2 glmU multimodular: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) 9657363;Vibrio cholerae 40 SO4746 atpC ATP synthase F1, epsilon subunit 26250475;Escherichia coli CFT073 46 SO4747 atpD ATP synthase F1, beta subunit 1573457;Haemophilus influenzae 12 SO4748 atpG ATP synthase F1, gamma subunit 28899844;Vibrio parahaemolyticus 27 SO4749 atpA ATP synthase F1, alpha subunit 15982012;Yersinia pestis 15 SO4750 atpH ATP synthase F1, delta subunit 26250480;Escherichia coli CFT073 50 SO4751 atpF ATP synthase F0, B subunit 50123432;Erwinia caratovora 30 SO4753 atpB ATP synthase F0, A subunit 9657372;Vibrio cholerae 37 SO4754 atpI ATP synthase protein I 9951901;Pseudomonas aeruginosa 99 SO4756 none ParA family protein 9657375;Vibrio cholerae 19 SO4230.1 none hypothetical quinone reductase 27380885;Bradyrhizobium japonicum 78 SO4537.2 none hypothetical Zn-dependent peptidase 13476821;Mesorhizobium loti 110 Microbial genomes compared to S. oneidensis MR-1 include: ap,Aeropyrum pernix;at,Agrobacterium tumefaciens;aa,Aquifex aeolicus;af,Archaeoglobus fulgidus;bc,Bacillus cereus ATCC 14579;bh,Bacillus halodurans;bs,Bacillus subtilis;bt,Bacteroides thetaiotaomicron VPI-5482;be,Bartonella henselae str. Houston-1;bv,Bdellovibrio bacteriovorus HD100;bl,Bifidobacterium longum NCC2705;bp,Bordetella pertussis Tohama I;bb,Borrelia burgdorferi;bj,Bradyrhizobium japonicum USDA 110;bm,Brucella melitensis str. 16M;bu,Buchnera sp. APS;ca,Campylobacter jejuni;cb,Candidatus Blochmannia floridanus;cc,Caulobacter crescentus CB15;cm,Chlamydia muridarum;cw,Chlamydophila pneumoniae CWL029;ct,Chlorobaculum tepidum TLS;cv,Chromobacterium violaceum ATCC 12472;cl,Clostridium acetobutylicum;cp,Clostridium perfringens str. 13;cg,Corynebacterium glutamicum ATCC 13032;cr,Coxiella burnetii RSA 493;dr,Deinococcus radiodurans;dp,Desulfotalea psychrophila LSv54;dv,Desulfovibrio vulgaris subsp. Vulgaris;ef,Enterococcus faecalis V583;ea,Erwinia carotovora subsp. atroseptica ;eh,Escherichia coli CFT073;ec,Escherichia coli K-12;eo,Escherichia coli O157:H7;ee,Escherichia coli O157:H7 EDL933;fn,Fusobacterium nucleatum ;gs,Geobacter sulfurreducens PCA;gv,Gloeobacter violaceus PCC 7421;hi,Haemophilus influenzae Rd;hs,Halobacterium sp. NRC- 1;hp,Helicobacter pylori 26695;lp,Lactobacillus plantarum WCFS1;ll,Lactococcus lactis subsp. Lactis;lx,Leifsonia xyli subsp. xyli str. CTCB07;li,Leptospira interrogans serovar Copenhageni;lm,Listeria monocytogenes EGD-e;mf,Mesoplasma florum L1;ml,Mesorhizobium loti;mt,Methanobacterium thermoautotrophicum;mj,Methanococcus jannaschii;mu,Methanococcus maripaludis S2;mk,Methanopyrus kandleri AV19;mz,Methanosarcina mazei Go1;mc,Mycobacterium leprae;mh,Mycobacterium tuberculosis H37Rv;mg,Mycoplasma genitalium;mm,Mycoplasma pneumoniae;mp,Mycoplasma pulmonis;ng,Nanoarchaeum equitans Kin4-M;nm,Neisseria meningitidis MC58;ne,Nitrosomonas europaea ATCC 19718;nn,Nostoc sp. PCC 7120;oi,Oceanobacillus iheyensis HTE831;pm,Pasteurella multocida;pl,Photorhabdus luminescens subsp.laumondee TT01;pt,Picrophilus torridus DSM 9790;rb,Pirellula sp 1 (Rhodopirellula baltica SH1);pg,Porphyromonas gingivalis W83;pr,Prochlorococcus marinus str. MIT 9313;pn,Propionibacterium acnes KPA171202;pa,Pseudomonas aeruginosa;ps,Pseudomonas syringae pv. tomato str. DC3000;pb,Pyrobaculum aerophilum str. IM2;py,Pyrococcus abyssi;ph,Pyrococcus horikoshii;rs,Ralstonia solanacearum GMI1000;ru,Rhodopseudomonas palustris CGA009;rp,Rickettsia prowazekii;sc,Saccharomyces cerevisiae;se,Salmonella enterica serovar Typhi;so,Salmonella enterica serovar Typhimurium LT2;sx,Shewanella oneidensis MR-1 (modularized);si,Shigella flexneri 2a str. 301;sm,Sinorhizobium meliloti;sa,Staphylococcus aureus subsp. aureus Mu50s;st,Streptococcus pneumoniae TIGR4;sp,Streptococcus pyogenes M1 GAS;sl,Streptomyces coelicolor A3(2);ss,Sulfolobus solfataricus;sy,Synechocystis PCC6803;tg,Thermoanaerobacter tengcongensis;tv,Thermoplasma volcanium;te,Thermosynechococcus elongatus BP-1;tm,Thermotoga maritima;tt,Thermus thermophilus HB27;tp,Treponema pallidum;tw,Tropheryma whipplei TW08/27;uu,Ureaplasma urealyticum;vc,Vibrio cholerae;vp,Vibrio parahaemolyticus RIMD 2210633;wg,Wigglesworthia glossinidia;we,Wolbachia endosymbiont of Drosphila melanogaster;ws,Wolinella succinogenes DSM 1740;xc,Xanthomonas campestris pv. campestris str. ATCC 33913;sf,Xylella fastidiosa 9a5c;yp,Yersinia pestis.