Halophilic Bacteria: Diversity and Biotechnological Applications Naïma Bou M’Handi
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Volume III N° 10 A1V3N10A2020 Revue de l’Entrepreneuriat et de l’Innovation Halophilic Bacteria: Diversity and Biotechnological Applications Naïma Bou m’handi Seafood Processing Technology Center (CSVTPM), National Research Institute of Marine Fisheries (INRH), BP: 1050, Agadir, Morocco [email protected] halophiles that grow oplimally in 3% (w/v) total Abstract- Hypersaline environments are extreme habitats on the salt, moderate halophiles with optimal growth at planet and have a diverse microbial population formed by halophilic microorganisms. They are considered to be actual or 3- 15% (w/v) salt and extreme halophiles that potential sources for discovery bioactive compounds, compatible grow optimally at 25% (w/v) salt [3]. The world solutes including novel and/or extraordinarily enzymes. To date, of halophilic microorganisms is highly diverse. a number of bioactive compounds for the use in various fields of biotechnology which show assorted biological activities ranging Halophilic and halotolerant from antioxidant, sunscreen and antibiotic actions have been microorganismsarefound in all three domains of reported. In addition, some halophilic microorganisms are life: Archaea, Bacteria and Eucarya. Saline and capable of producing massive amounts of compatible solutes that are useful as stabilizers for biomolecules or stress-protective hypersaline environments are found in wide agents. The present review will impart knowledge and discuss on variety of aquatic and terrestrial ecosystems. In diversity of halophilic bacteria and their use in various terms of marine environment, Morocco has biotechnological applications, including industrial, pharmaceutical, agricultural and environmental aspects. coastline of about 3500 Km. Morocco is know Culture dependent as well as culture independent methods for for its rich biodiversity especially in context with isolation of halophiles should go hand in hand to provide the halophiles because; it is surrounded by atlantic insight mechanisms of halophilic adaptation and their future applications. ocean and medeterraneen sea. Marine environment is the the prime reservoir of Keywords: halobacteria,Diversity, biocompounds, biological diversity and the marine biotechnology. microorganisms are recognized to be rich sources of novel compounds. Recently, there is I. INTRODUCTION accelerated interest in the study of marine Saline habitats arefrequentlyinhabited by an halophiles, with the aim of providing the abundance of microbial communities adapted to information on microbial diversity and their role these ecosystems. Among the microorganisms, in biogeochemical cycling in marine ecosystems the bacteria play a major role as important and and in exploiting their ability to produce novel dominant in habitants of saline and hypersaline enzymes and industrially important bioactive environments [1,2]. Micoorganisms that thrive in substance like biosurfactants, extracellular these environments have been broadly classified polymeric substances (EPS), other crutial into halophilic microorganisms and halotolerant metabolites/compounds for biotechnological microorganisms.Halophiles are the applications. microorganisms requiring salt for their growth The above survey shows that thus far the whereas; halotolerant microorganisms are able to halophilic microorganisms have found relatively grow in the absence as well as in the presence of few commercially viable applications. With the salt. Halophiles can be further divided into three exception of β-carotene production by Dunaliella categories according to their halotolerance, slight and ectoine synthesis using Halomonas and other 1 Volume III N° 10 A1V3N10A2020 Revue de l’Entrepreneuriat et de l’Innovation moderately halophilic Bacteria, most other conditions due to their high salinity, exposure to potential applications suggested are no more than high and low temperatures, low oxygen ideas only, waiting to be exploited. The list of conditions and in some cases, high pH values. possible applications presented in the sections Bacteria and Archaea are the most widely below is by no means exhaustive and additional distributed organisms in these environments [4]. ideas have been presented in the literature, such The classification of Kushner and Kamekura [5] as, for example, production of liposomes for the defines different categories of halophilic cosmetics industry and exploitation of microorganisms based on the optimal salt Halobacterium gas vesicles in biotechnological concentration wherein they show optimal growth, processes. Many patents have been issued for and it includes four categories: non-halophilic these and other applications, but the ideas are still organisms are defined as those requiring less than to be implemented in commercial ventures. With 1% NaCl, whereas if they can tolerate high salt all the advantages listed for the use of halophiles concentrations are considered as halotolerant in industrial processes, there are disadvantages as microorganisms. With respect to halophilic well. For mass cultivation of aerobic bacteria, the microorganisms, the classification distinguishes low solubility of gases in concentrated brines among slight halophiles (marine bacteria), which may severely limit oxygen supply to the cultures. grow best in media with 1% to 3% NaCl, Also the aggressive nature of the salts should be moderate halophiles, growing best in media with taken into account during the construction of 3% to 15% NaCl, and extreme halophiles, which reactors with metal parts exposed to the medium. show optimal growth in media containing 15% to It is possible to build corrosion-resistant 30% NaCl. Halophiles have developed two bioreactors suitable for high salt media, but their different adaptive strategies to cope with the cost is significantly higher than that of osmotic pressureinduced by the high NaCl conventional fermenters. The tremendous concentration of the normal environments they diversity of halophilic microorganisms found in inhabit [6, 7]. The halobacteria and some nature is still far from being fully exploited. extremely halophilic bacteria accumulate Approaches derived from genomics and inorganic ions in the cytoplasm (K+, Na+, Cl-) to proteomics have opened new possibilities, and balance the osmotic pressure of the medium, and genetic systems are now also available for a they have developed specific proteins that are number of halophiles. The present review stable and active in the presence of salts. In summarizes the current diversity of halophilic contrast, moderate halophiles accumulate in the bacteria and their use in various biotechnological cytoplasm high amounts of specific organic application, including industrial, pharmaceutical, osmolytes, which function as osmoprotectants, agricultural and environmental aspects. Briefly providing osmotic balance without interfering the mechanisms of adaptation in saline with the normal metabolism of the cell [8, 9]. environments and the molecular approaches to access the diversity of halophilies will be discussed. Halophilic bacteria are one of the most commonly isolated, reported, studied and II. DIVERSITY characterized microbes amongst halophiles [10]. Microbial life can be found over a wide range of They exist in various forms of colonies, ranging extreme conditions (salinity, pH, temperature, pressure, light intensity, oxygen and nutrient from pigmented to non - pigmented, according to conditions). Hypersaline environments constitute the salt concentration in the media. They are slow typical examples of environments with extreme growing compared to non- halophile or normal 2 Volume III N° 10 A1V3N10A2020 Revue de l’Entrepreneuriat et de l’Innovation bacteria. The extremely halophilic bacteria grow the attention in recent research [10]. Slightly extremely slowly [4]. For in vitro culture on agar halophilic bacteria have been reported in studies plates, most require natural brines along with a focused on habitats such as the Dead Sea, GSL, variety of other nutrients such as fish or milk Lake Magadi, Wadi El Natrun and some other extracts for their growth and a few of them also extreme hypersaline environments that yield require complex nutrients like yeast extract for extremophilic bacteria. Slightly halophilic their survival. During the last few decades there bacteria form a smaller proportion of the was progress in providing a systematic base for population in these environments and typically classifying halophilic bacteria, including the use can not be found in these harsh habitats [17]. The of various phenotypic characteristic tests and other drawback of characterising slightly analytical apparatus. However, there are now halophilic bacteria is their characteristics that taxonomically emerging groups of halophilic resemble the non-halophilic or normal bacteria, bacteria and their classification has not yet been and these are typically of a lower interest for much developed [11]. Salt characterization for research. Due to the lack of sufficient the optimum growth of halophilic bacteria is information on the slightly halophilic bacteria, required prior to classification, but this step is only a description of moderately and extremely costly, time consuming and is limited to only halophilic bacteria is provided in this review. those cultivable and clonable isolates. A test methodology for halophilic bacteria has been Extremely halophilic bacteria. Extremely recommended in which the media must be added halophilic bacteria belong to the class Halobacteria, family Halobacteriaceae and