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Reptile-Like Physiology in Early Jurassic Stem-Mammals
bioRxiv preprint doi: https://doi.org/10.1101/785360; this version posted October 10, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title: Reptile-like physiology in Early Jurassic stem-mammals Authors: Elis Newham1*, Pamela G. Gill2,3*, Philippa Brewer3, Michael J. Benton2, Vincent Fernandez4,5, Neil J. Gostling6, David Haberthür7, Jukka Jernvall8, Tuomas Kankanpää9, Aki 5 Kallonen10, Charles Navarro2, Alexandra Pacureanu5, Berit Zeller-Plumhoff11, Kelly Richards12, Kate Robson-Brown13, Philipp Schneider14, Heikki Suhonen10, Paul Tafforeau5, Katherine Williams14, & Ian J. Corfe8*. Affiliations: 10 1School of Physiology, Pharmacology & Neuroscience, University of Bristol, Bristol, UK. 2School of Earth Sciences, University of Bristol, Bristol, UK. 3Earth Science Department, The Natural History Museum, London, UK. 4Core Research Laboratories, The Natural History Museum, London, UK. 5European Synchrotron Radiation Facility, Grenoble, France. 15 6School of Biological Sciences, University of Southampton, Southampton, UK. 7Institute of Anatomy, University of Bern, Bern, Switzerland. 8Institute of Biotechnology, University of Helsinki, Helsinki, Finland. 9Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland. 10Department of Physics, University of Helsinki, Helsinki, Finland. 20 11Helmholtz-Zentrum Geesthacht, Zentrum für Material-und Küstenforschung GmbH Germany. 12Oxford University Museum of Natural History, Oxford, OX1 3PW, UK. 1 bioRxiv preprint doi: https://doi.org/10.1101/785360; this version posted October 10, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 13Department of Anthropology and Archaeology, University of Bristol, Bristol, UK. 14Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, UK. -
First Report of Neopolystoma Price, 1939 (Monogenea: Polystomatidae) with the Description of Three New Species Louis H
Du Preez et al. Parasites & Vectors (2017) 10:53 DOI 10.1186/s13071-017-1986-y RESEARCH Open Access Tracking platyhelminth parasite diversity from freshwater turtles in French Guiana: First report of Neopolystoma Price, 1939 (Monogenea: Polystomatidae) with the description of three new species Louis H. Du Preez1,2*, Mathieu Badets1, Laurent Héritier1,3,4 and Olivier Verneau1,3,4 Abstract Background: Polystomatid flatworms in chelonians are divided into three genera, i.e. Polystomoides Ward, 1917, Polystomoidella Price, 1939 and Neopolystoma Price, 1939, according to the number of haptoral hooks. Among the about 55 polystome species that are known to date from the 327 modern living chelonians, only four species of Polystomoides are currently recognised within the 45 South American freshwater turtles. Methods: During 2012, several sites in the vicinity of the cities Cayenne and Kaw in French Guiana were investigated for freshwater turtles. Turtles were collected at six sites and the presence of polystomatid flatworms was assessed from the presence of polystome eggs released by infected specimens. Results: Among the three turtle species that were collected, no polystomes were found in the gibba turtle Mesoclemmys gibba (Schweigger, 1812). The spot-legged turtle Rhinoclemmys punctularia (Daudin, 1801) was infected with two species of Neopolystoma Price, 1939, one in the conjunctival sacs and the other in the urinary bladder, while the scorpion mud turtle Kinosternon scorpioides (Linnaeus, 1766) was found to be infected with a single Neopolystoma species in the conjunctival sacs. These parasites could be distinguished from known species of Neopolystoma by a combination of morphological characteristics including body size, number and length of genital spines, shape and size of the testis. -
A Molecular Phylogeny of Equatorial African Lacertidae, with the Description of a New Genus and Species from Eastern Democratic Republic of the Congo
Zoological Journal of the Linnean Society, 2011, 163, 913–942. With 7 figures A molecular phylogeny of Equatorial African Lacertidae, with the description of a new genus and species from eastern Democratic Republic of the Congo ELI GREENBAUM1*, CESAR O. VILLANUEVA1, CHIFUNDERA KUSAMBA2, MWENEBATU M. ARISTOTE3 and WILLIAM R. BRANCH4,5 1Department of Biological Sciences, University of Texas at El Paso, 500 West University Avenue, El Paso, TX 79968, USA 2Laboratoire d’Herpétologie, Département de Biologie, Centre de Recherche en Sciences Naturelles, Lwiro, République Démocratique du Congo 3Institut Superieur d’Ecologie pour la Conservation de la Nature, Katana Campus, Sud Kivu, République Démocratique du Congo 4Bayworld, P.O. Box 13147, Humewood 6013, South Africa 5Research Associate, Department of Zoology, Nelson Mandela Metropolitan University, Port Elizabeth, South Africa Received 25 July 2010; revised 21 November 2010; accepted for publication 18 January 2011 Currently, four species of the lacertid lizard genus Adolfus are known from Central and East Africa. We sequenced up to 2825 bp of two mitochondrial [16S and cytochrome b (cyt b)] and two nuclear [(c-mos (oocyte maturation factor) and RAG1 (recombination activating gene 1)] genes from 41 samples of Adolfus (representing every species), two species each of Gastropholis and Holaspis, and in separate analyses combined these data with GenBank sequences of all other Eremiadini genera and four Lacertini outgroups. Data from DNA sequences were analysed with maximum parsimony (PAUP), maximum-likelihood (RAxML) and Bayesian inference (MrBayes) criteria. Results demonstrated that Adolfus is not monophyletic: Adolfus africanus (type species), Adolfus alleni, and Adolfus jacksoni are sister taxa, whereas Adolfus vauereselli and a new species from the Itombwe Plateau of Democratic Republic of the Congo are in a separate lineage. -
Reptiles and Amphibians of Otago
Society for Research on Amphibians and Reptiles in New Zealand (SRARNZ) presents Reptiles and Amphibians of Otago Otago is a large (31,251 km2) and lightly populated region of the southern South Island of Aotearoa New Zealand, stretching from the eastern coastline west to the Southern Alps. The earliest humans, of East Polynesian origin, arrived about 700 years ago. The largest settlement today is the coastal city of Dunedin (pop. >127,000), which grew from a Scottish influx in the 1800s. The Otago Regional Council administers the region, and tribal authority (mana whenua) rests with the iwi of Ngāi Tahu. Climates in the Otago region (roughly 45°– leiopelmatid frogs survive elsewhere in 47°S) range from changeable, cool- New Zealand. Two species of introduced temperate conditions near the coast to frogs are present, but there are no the near-continental climates (baking hot crocodilians, salamanders, terrestrial summers, freezing winters) of the interior. snakes or turtles. Marine turtles (mainly The region provides varied habitats for leatherback turtles, Dermochelys coriacea) herp species, including sand-dunes, visit the coastal waters of Otago but do grasslands, shrublands, wetlands, forests, not nest here. rock structures and scree slopes, some occupied to at least 1900 m above sea level. Today’s herpetofauna is dominated by lizards (solely geckos and skinks), including about 10 described species. A further 12 or more undescribed taxa are recognised Otago by tag names for conservation purposes, and we follow that approach here. All lizards in Otago are viviparous and long- lived, and remain vulnerable to ongoing habitat loss and predation by introduced mammals. -
An Expert-Based Assessment Model for Evaluating Habitat Suitability of Pond-Breeding Amphibians
sustainability Article An Expert-Based Assessment Model for Evaluating Habitat Suitability of Pond-Breeding Amphibians Shin-Ruoh Juang 1, Szu-Hung Chen 2 and Chen-Fa Wu 1,* 1 Department of Horticulture, National Chung Hsing University, Taichung City 402, Taiwan; [email protected] 2 Department of Ecosystem Science & Management, Texas A&M University, College Station, TX 77843, USA; [email protected] * Correspondence: [email protected]; Tel./Fax: +886-4-2285-9125 Academic Editor: Iain Gordon Received: 8 November 2016; Accepted: 10 February 2017; Published: 16 February 2017 Abstract: Farm ponds are important habitats for amphibians, birds, and other wildlife. In Taiwan, artificial ponds were originally created on farmlands for irrigation purposes and the needs of the domestic water supply. Although pond creation is a typical farming practice, it also provides habitats for pond-breeding amphibians. Thus, it is essential to understand the current status of habitats and their vulnerability regarding urgent conservation needs for target species. Günther’s frog (Hylarana guentheri), a pond-breeding amphibian, has a high sensitivity towards surrounding environmental changes, and can be used as an indicator species to assess habitat suitability. The purpose of this study is to establish a systematic framework to assess the habitat suitability of pond-breeding amphibians by using Günther’s frog as a pilot-study species. First, we collected frog survey data from Chiayi, Taiwan, from winter 2013 to spring 2015, and investigated the present status of the environmental conditions around the ponds. Next, expert questionnaires and the fuzzy Delphi method were applied to establish the hierarchical evaluation criteria regarding the habitat suitability assessment. -
Pulsed Evolution Shaped Modern Vertebrate Body Sizes
Pulsed evolution shaped modern vertebrate body sizes Michael J. Landisa and Joshua G. Schraiberb,c,1 aDepartment of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520; bDepartment of Biology, Temple University, Philadelphia, PA 19122; and cInstitute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA 19122 Edited by Neil H. Shubin, The University of Chicago, Chicago, IL, and approved October 6, 2017 (received for review June 18, 2017) The relative importance of different modes of evolution in shap- ties of these methods, nor is much known about the prevalence of ing phenotypic diversity remains a hotly debated question. Fos- pulsed change throughout some of Earth’s most intensely stud- sil data suggest that stasis may be a common mode of evolution, ied clades. while modern data suggest some lineages experience very fast Here, we examine evidence for pulsed evolution across ver- rates of evolution. One way to reconcile these observations is to tebrate taxa, using a method for fitting L´evy processes to com- imagine that evolution proceeds in pulses, rather than in incre- parative data. These processes can capture both incremental and ments, on geological timescales. To test this hypothesis, we devel- pulsed modes of evolution in a single, simple framework. We oped a maximum-likelihood framework for fitting Levy´ processes apply this method to analyze 66 vertebrate clades containing to comparative morphological data. This class of stochastic pro- 8,323 extant species for evidence of pulsed evolution by compar- cesses includes both an incremental and a pulsed component. We ing the statistical fit of several varieties of L´evy jump processes found that a plurality of modern vertebrate clades examined are (modeling different types of pulsed evolution) to three models best fitted by pulsed processes over models of incremental change, that emphasize alternative macroevolutionary dynamics. -
Reptile Genomes Open the Frontier for Comparative Analysis of Amniote Development and Regeneration MARC TOLLIS, ELIZABETH D
Int. J. Dev. Biol. 58: 863-871 (2014) doi: 10.1387/ijdb.140316kk www.intjdevbiol.com Reptile genomes open the frontier for comparative analysis of amniote development and regeneration MARC TOLLIS, ELIZABETH D. HUTCHINS and KENRO KUSUMI* School of Life Sciences, Arizona State University, Tempe, AZ, USA ABSTRACT Developmental genetic studies of vertebrates have focused primarily on zebrafish, frog and mouse models, which have clear application to medicine and well-developed genomic resources. In contrast, reptiles represent the most diverse amniote group, but have only recently begun to gather the attention of genome sequencing efforts. Extant reptilian groups last shared a common ancestor ~280 million years ago and include lepidosaurs, turtles and crocodilians. This phylogenetic diversity is reflected in great morphological and behavioral diversity capturing the attention of biologists interested in mechanisms regulating developmental processes such as somitogenesis and spinal patterning, regeneration, the evolution of “snake-like” morphology, the formation of the unique turtle shell, and the convergent evolution of the four-chambered heart shared by mammals and archosaurs. The complete genome of the first non-avian reptile, the green anole lizard, was published in 2011 and has provided insights into the origin and evolution of amniotes. Since then, the genomes of multiple snakes, turtles, and crocodilians have also been completed. Here we will review the current diversity of available reptile genomes, with an emphasis on their evolutionary relationships, and will highlight how these genomes have and will continue to facilitate research in developmental and regenerative biology. KEY WORDS: reptile, genomics, gene expression, somitogenesis, regeneration Introduction 2013) in addition to 28 avian genomes (Table 1; Zhang et al., 2014). -
Eli Greenbaum, Ph.D
ELI GREENBAUM, PH.D. Curriculum Vitae PRESENT ADDRESS University of Texas at El Paso Cell: (785) 393-3583 Dept. of Biological Sciences Office: (915) 747-5553 500 West University Ave. Lab: (915) 747-5645 El Paso, TX 79968* FAX: (915) 747-5808 *zip code 79902 for FEDEX deliveries E-mail: [email protected] WEBSITES Homepage: http://eligreenbaum.iss.utep.edu/default.htm Blog from 2014: http://greenbaum2014.at.utep.edu/category/fieldwork/2014-expedition/ Blog from 2013: http://greenbaum.at.utep.edu/index.php/2013-expedition ACADEMIC POSITIONS 2013–present. Associate Professor, Dept. of Biological Sciences, University of Texas at El Paso. 2008–2012. Assistant Professor, Dept. of Biological Sciences, University of Texas at El Paso. 2006–2008. Postdoctoral Research Fellow, Dept. of Biology, Villanova University, Villanova, PA. EDUCATION 2006. Ph.D. (Ecology and Evolutionary Biology). The University of Kansas, Lawrence. Oral exam: 4 November 2002. Dissertation title: Molecular systematics of New World microhyline frogs, with an emphasis on the Middle American genus Hypopachus. Dissertation defense: 25 January 2006 (defended with honors). Advisor: Dr. Linda Trueb. 1998. M.S. (Biology). University of Louisiana at Monroe, Monroe. Thesis title: Sexual differentiation in the spiny softshell turtle (Apalone spinifera). Advisor: Dr. John L. Carr. 1996. B.S. (Biological Sciences). Binghamton University, Binghamton, New York. 1992. High School Diploma. City Honors High School, Buffalo, New York. PENDING GRANTS 2014. Institute for Museum and Library Services, Museums for America Program, $150,000. Natural History Collection Stewardship for the 21st Century at the University of Texas at El Paso. PI. Resubmission. 2015. NSF Biodiversity: Discovery & Analysis Program. -
Andhra Pradesh
PROFILES OF SELECTED NATIONAL PARKS AND SANCTUARIES OF INDIA JULY 2002 EDITED BY SHEKHAR SINGH ARPAN SHARMA INDIAN INSTITUTE OF PUBLIC ADMINISTRATION NEW DELHI CONTENTS STATE NAME OF THE PA ANDAMAN AND NICOBAR CAMPBELL BAY NATIONAL PARK ISLANDS GALATHEA NATIONAL PARK MOUNT HARRIET NATIONAL PARK NORTH BUTTON ISLAND NATIONAL PARK MIDDLE BUTTON ISLAND NATIONAL PARK SOUTH BUTTON ISLAND NATIONAL PARK RANI JHANSI MARINE NATIONAL PARK WANDOOR MARINE NATIONAL PARK CUTHBERT BAY WILDLIFE SANCTUARY GALATHEA BAY WILDLIFE SANCTUARY INGLIS OR EAST ISLAND SANCTUARY INTERVIEW ISLAND SANCTUARY LOHABARRACK OR SALTWATER CROCODILE SANCTUARY ANDHRA PRADESH ETURUNAGARAM SANCTUARY KAWAL WILDLIFE SANCTUARY KINNERSANI SANCTUARY NAGARJUNASAGAR-SRISAILAM TIGER RESERVE PAKHAL SANCTUARY PAPIKONDA SANCTUARY PRANHITA WILDLIFE SANCTUARY ASSAM MANAS NATIONAL PARK GUJARAT BANSDA NATIONAL PARK PURNA WILDLIFE SANCTUARY HARYANA NAHAR SANCTUARY KALESAR SANCTUARY CHHICHHILA LAKE SANCTUARY ABUBSHEHAR SANCTUARY BIR BARA VAN JIND SANCTUARY BIR SHIKARGAH SANCTUARY HIMACHAL PRADESH PONG LAKE SANCTUARY RUPI BHABA SANCTUARY SANGLA SANCTUARY KERALA SILENT VALLEY NATIONAL PARK ARALAM SANCTUARY CHIMMONY SANCTUARY PARAMBIKULAM SANCTUARY PEECHI VAZHANI SANCTUARY THATTEKAD BIRD SANCTUARY WAYANAD WILDLIFE SANCTUARY MEGHALAYA BALPAKARAM NATIONAL PARK SIJU WILDLIFE SANCTUARY NOKREK NATIONAL PARK NONGKHYLLEM WILDLIFE SANCTUARY MIZORAM MURLEN NATIONAL PARK PHAWNGPUI (BLUE MOUNTAIN) NATIONAL 2 PARK DAMPA WILDLIFE SANCTUARY KHAWNGLUNG WILDLIFE SANCTUARY LENGTENG WILDLIFE SANCTUARY NGENGPUI WILDLIFE -
A Review of Vertebrate Track-Bearing Formations
5 Lockley, M.G. & Lucas, S.G., eds., 2014, Fossil footprints of western North America: NMMNHS Bulletin 62 A REVIEW OF VERTEBRATE TRACK-BEARING FORMATIONS FROM THE MESOZOIC AND EARLIEST CENOZOIC OF WESTERN CANADA WITH A DESCRIPTION OF A NEW THEROPOD ICHNOSPECIES AND REASSIGNMENT OF AN AVIAN ICHNOGENUS RICHARD T. MCCREA1, LISA G. BUCKLEY1, A. GUY PLINT2, PHILIP J. CURRIE3, JAMES W. HAGGART4, CHARLES W. HELM1 AND S. GEORGE PEMBERTON5 1Peace Region Palaeontology Research Centre; Box 1540; Tumbler Ridge, British Columbia; V0C 2W0; CANADA; 2Department of Earth Sciences; University of Western Ontario; London, Ontario; N6A 5B7; CANADA; 3Department of Biological Sciences; University of Alberta, Edmonton, Alberta; T6G 2E9; CANADA; 4Geological Survey of Canada; 1500-605 Robson Street; Vancouver, British Columbia; V6B 5J3; CANADA; 5Department of Earth and Atmospheric Sciences; University of Alberta; Edmonton, Alberta; T6G 2E3; CANADA Abstract—The past quarter century has seen a marked increase in the recognition of fossil vertebrate tracksites in western Canada. Most of these finds were made in Alberta and British Columbia, but the Yukon Territory can lay claim to at least one tracksite and probably has the potential to yield more sites. The record of dinosaur tracks with skin impressions has increased dramatically, and is now represented by specimens of ankylosaurs, large ornithopods, small theropods and tyrannosauroids. Notable new finds include the first record of sauropods in Canada, evidence of herding behavior in ankylosaurs and the first pterosaur tracks in Canada. First discoveries of track specimens from several formations in western Canada include the Mountain Park Member of the Gates Formation in Alberta, and the Boulder Creek, Goodrich, Kaskapau, Cardium and Marshybank formations in northeastern British Columbia. -
Endoparazitická Monogenea (Platyhelminthes): Druhová Diverzita a Spektrum Hostitelů
MASARYKOVA UNIVERZITA PŘÍRODOVĚDECKÁ FAKULTA ÚSTAV BOTANIKY A ZOOLOGIE ENDOPARAZITICKÁ MONOGENEA (PLATYHELMINTHES): DRUHOVÁ DIVERZITA A SPEKTRUM HOSTITELŮ Bakalářská práce Jitka Fojtů Vedoucí práce: Mgr. Eva Řehulková, Ph.D. Brno 2016 Bibliografický záznam Autor Jitka Fojtů Přírodovědecká fakulta, Masarykova univerzita Ústav botaniky a zoologie Název práce: Endoparasitická monogenea (Platyhelminthes): druhová diverzita a spektrum hostitelů Studijní program Ekologická a evoluční biologie Studijní obor: Ekologická a evoluční biologie Vedoucí práce: Mgr. Eva Řehulková, Ph.D. Akademický rok: 2015/2016 Počet stran: 146 Klíčová slova: Monogenea; Amphibdellatidae; Anoplodiscidae; Capsalidae; Chimaericolidae; Dactylogyridae; Diclidophoridae; Gyrodactylidae; Hexabothriidae; Iagotrematidae; Lagarocotylidae; Microbothriidae; Monocotylidae; Montchadskyellidae; Polystomatidae; Urogyridae; Amphibia; Polystoma; močový měchýř; nosní dutiny; močovody; check list; adaptace; endoparazitismus Bibliographic Entry Author Jitka Fojtů Faculty of Science, Masaryk University Department of Botany and Zoology Title of Thesis: Endoparasitic Monogenea (Platyhelminthes): Species diversity and host spectrum Degree programme: Ekological and Evolutionary Biology Field of Study: Ekological and Evolutionary Biology Supervisor: Mgr. Eva Řehulková, Ph.D. Academic Year: 2015/2016 Number of Pages: 146 Keywords: Monogenea; Amphibdellatidae; Anoplodiscidae; Capsalidae; Dactylogyridae; Diclidophoridae; Gyrodactylidae; Hexabothriidae; Iagotrematidae; Lagarocotylidae; Microbothriidae; -
BESS) Detailed Ecology Assessment Tilt Renewables Reference: 509891 Revision: 2 2021-02-22
Latrobe Valley Battery Energy Storage System (BESS) Detailed Ecology assessment Tilt Renewables Reference: 509891 Revision: 2 2021-02-22 Document control record Document prepared by: Aurecon Australasia Pty Ltd ABN 54 005 139 873 Aurecon Centre Level 8, 850 Collins Street Docklands, Melbourne VIC 3008 PO Box 23061 Docklands VIC 8012 Australia T +61 3 9975 3000 F +61 3 9975 3444 E [email protected] W aurecongroup.com A person using Aurecon documents or data accepts the risk of: a) Using the documents or data in electronic form without requesting and checking them for accuracy against the original hard copy version. b) Using the documents or data for any purpose not agreed to in writing by Aurecon. Document control Report title Detailed Ecology assessment Document code Project number 509891 File path Client Tilt Renewables Client contact Client reference Rev Date Revision Author Reviewer Verifier Approver details/status (if required) 0 2021-01-14 First Draft Justin Sullivan Brett Taylor Brett Taylor Greta Thraves 1 2021-02-04 Revised report to Justin Sullivan Greta Thraves respond to client comments 2 2021-02-22 Revised report to Justin Sullivan Greta Thraves respond to client comments Current revision 2 Approval Author signature Approver signature Name Justin Sullivan Name Greta Thraves Title Senior Consultant Title Manager, Planning and (Ecologist) Environment Project number 509891 File Latrobe Valley BESS – Detailed Ecology Assessment, 2021-02-22 Revision 2 ii Executive summary Aurecon was commissioned by Tilt Renewables (the Proponent) to undertake an ecological assessment to inform the design and planning approvals for a proposed Latrobe Valley Battery Energy Storage System (BESS) at Morwell in eastern Victoria (the Project).