IMPACT of INFECTIOUS DISEASE on HUMANS and OUR ORIGINS Glossary
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Anthropogeny Tracks
anthropogeny t acksa CARTA newsletter Volume 3, Issue 2 - May 2015 Human-Climate Interactions HUMAN-CLIMATE and Evolution: Past and INTERACTIONS AND EVOLUTION: Future PAST AND FUTURE Our early ancestors evolved on a drying, cooling, and highly variable planet, which has led to competing ideas as to how climate may have shaped human evolution. Equally compelling is the question of how and when humans began to affect their surroundings to such an extent as to become a force of climate change, with disruptions affecting the globe today. According to earth scientists, paleontologists, and scholars in other fields, the planet has entered a new geological phase – the Anthropocene, the age of humans. How did this transition of our species from an ape-like ancestor in Africa to the current planetary force occur? What are the prospects for the future of world climate, ecosystems, and our species? CARTA’s May 15, 2015 symposium, Human-Climate Interactions and Evolution: Past and Future, presents varied perspectives on these critical questions from earth scientists, ecologists, and paleoanthropologists. The fantastic lineup of speakers includes: This CARTA symposium is made possible by The G. Harold and African Climate Change and Human Evolution Leila Y. Mathers Charitable Foundation and Rita Atkinson. Peter deMenocal, Columbia University The Climatic Framework of Neandertal Evolution Jean-Jacques Hublin, Max Planck Institute for Evolutionary Anthropology Symposium Details Climate Instability and the Evolution of Human Adaptability • Friday, May -
Effects of Emerging Infectious Diseases on Amphibians: a Review of Experimental Studies
diversity Review Effects of Emerging Infectious Diseases on Amphibians: A Review of Experimental Studies Andrew R. Blaustein 1,*, Jenny Urbina 2 ID , Paul W. Snyder 1, Emily Reynolds 2 ID , Trang Dang 1 ID , Jason T. Hoverman 3 ID , Barbara Han 4 ID , Deanna H. Olson 5 ID , Catherine Searle 6 ID and Natalie M. Hambalek 1 1 Department of Integrative Biology, Oregon State University, Corvallis, OR 97331, USA; [email protected] (P.W.S.); [email protected] (T.D.); [email protected] (N.M.H.) 2 Environmental Sciences Graduate Program, Oregon State University, Corvallis, OR 97331, USA; [email protected] (J.U.); [email protected] (E.R.) 3 Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN 47907, USA; [email protected] 4 Cary Institute of Ecosystem Studies, Millbrook, New York, NY 12545, USA; [email protected] 5 US Forest Service, Pacific Northwest Research Station, Corvallis, OR 97331, USA; [email protected] 6 Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA; [email protected] * Correspondence [email protected]; Tel.: +1-541-737-5356 Received: 25 May 2018; Accepted: 27 July 2018; Published: 4 August 2018 Abstract: Numerous factors are contributing to the loss of biodiversity. These include complex effects of multiple abiotic and biotic stressors that may drive population losses. These losses are especially illustrated by amphibians, whose populations are declining worldwide. The causes of amphibian population declines are multifaceted and context-dependent. One major factor affecting amphibian populations is emerging infectious disease. Several pathogens and their associated diseases are especially significant contributors to amphibian population declines. -
Key Factors That Enable the Pandemic Potential of RNA Viruses and Inter-Species Transmission: a Systematic Review
viruses Review Key Factors That Enable the Pandemic Potential of RNA Viruses and Inter-Species Transmission: A Systematic Review Santiago Alvarez-Munoz , Nicolas Upegui-Porras , Arlen P. Gomez and Gloria Ramirez-Nieto * Microbiology and Epidemiology Research Group, Facultad de Medicina Veterinaria y de Zootecnia, Universidad Nacional de Colombia, Bogotá 111321, Colombia; [email protected] (S.A.-M.); [email protected] (N.U.-P.); [email protected] (A.P.G.) * Correspondence: [email protected]; Tel.: +57-1-3-16-56-93 Abstract: Viruses play a primary role as etiological agents of pandemics worldwide. Although there has been progress in identifying the molecular features of both viruses and hosts, the extent of the impact these and other factors have that contribute to interspecies transmission and their relationship with the emergence of diseases are poorly understood. The objective of this review was to analyze the factors related to the characteristics inherent to RNA viruses accountable for pandemics in the last 20 years which facilitate infection, promote interspecies jump, and assist in the generation of zoonotic infections with pandemic potential. The search resulted in 48 research articles that met the inclusion criteria. Changes adopted by RNA viruses are influenced by environmental and host-related factors, which define their ability to adapt. Population density, host distribution, migration patterns, and the loss of natural habitats, among others, have been associated as factors in the virus–host interaction. This review also included a critical analysis of the Latin American context, considering its diverse and unique social, cultural, and biodiversity characteristics. The scarcity of scientific information is Citation: Alvarez-Munoz, S.; striking, thus, a call to local institutions and governments to invest more resources and efforts to the Upegui-Porras, N.; Gomez, A.P.; study of these factors in the region is key. -
How Do Viruses Emerge to Cause Epidemics After Spillover?
Onward transmission of viruses: how do viruses emerge to cause royalsocietypublishing.org/journal/rstb epidemics after spillover? Brian R. Wasik1, Emmie de Wit2, Vincent Munster2, James O. Lloyd-Smith3,4, 5 1 Review Luis Martinez-Sobrido and Colin R. Parrish 1Baker Institute for Animal Health, Department of Microbiology and Immunology, College of Veterinary Cite this article: Wasik BR, de Wit E, Munster Medicine, Cornell University, Ithaca, NY 14853, USA 2 V, Lloyd-Smith JO, Martinez-Sobrido L, Parrish Laboratory of Virology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA CR. 2019 Onward transmission of viruses: 3Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, how do viruses emerge to cause epidemics CA 9095-7239, USA after spillover? Phil. Trans. R. Soc. B 374: 4Fogarty International Center, National Institutes of Health, Bethesda, MD 20892, USA 5 20190017. Department of Microbiology and Immunology, University of Rochester, Rochester, NY 14642, USA http://dx.doi.org/10.1098/rstb.2019.0017 CRP, 0000-0002-1836-6655 The critical step in the emergence of a new epidemic or pandemic viral patho- Accepted: 5 May 2019 gen occurs after it infects the initial spillover host and then is successfully transmitted onwards, causing an outbreak chain of transmission within that One contribution of 20 to a theme issue new host population. Crossing these choke points sets a pathogen on the ‘Dynamic and integrative approaches to pathway to epidemic emergence. While many viruses spill over to infect understanding pathogen spillover’. new or alternative hosts, only a few accomplish this transition—and the reasons for the success of those pathogens are still unclear. -
Assembling Evidence for Identifying Reservoirs of Infection
TREE-1806; No. of Pages 10 Review Assembling evidence for identifying reservoirs of infection 1 1,2 1,3 1 4 Mafalda Viana , Rebecca Mancy , Roman Biek , Sarah Cleaveland , Paul C. Cross , 3,5 1 James O. Lloyd-Smith , and Daniel T. Haydon 1 Boyd Orr Centre for Population and Ecosystem Health, Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK 2 School of Computing Science, University of Glasgow, Glasgow G12 8QQ, UK 3 Fogarty International Center, National Institutes of Health, Bethesda, MD 20892, USA 4 US Geological Survey, Northern Rocky Mountain Science Center 2327, University Way, Suite 2, Bozeman, MT 59715, USA 5 Department of Ecology and Evolutionary Biology, University of California at Los Angeles, Los Angeles, CA 90095, USA Many pathogens persist in multihost systems, making patterns of incidence and prevalence (see Glossary) that the identification of infection reservoirs crucial for result from the connectivity between source and target devising effective interventions. Here, we present a con- populations (black arrows in Figure I in Box 1). We then ceptual framework for classifying patterns of incidence review methods that allow us to identify maintenance or and prevalence, and review recent scientific advances nonmaintenance populations (squares or circles in Figure that allow us to study and manage reservoirs simulta- I, Box 1), how they are connected (arrows in Figure I, Box neously. We argue that interventions can have a crucial 1), and the role that each of these populations has in role in enriching our mechanistic understanding of how maintaining the pathogen (i.e., reservoir capacity). -
From So Simple a Beginning... the Expansion of Evolutionary Thought
From So Simple A Beginning... The Expansion Of Evolutionary Thought #1 #2 From So Simple A Beginning... The Expansion Of Evolutionary Thought Compiled and Edited by T N C Vidya #3 All rights reserved. No parts of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, without prior permission of the publisher. c Indian Academy of Sciences 2019 Reproduced from Resonance–journal of science education Published by Indian Academy of Sciences Production Team: Geetha Sugumaran, Pushpavathi R and Srimathi M Reformatted by : Sriranga Digital Software Technologies Private Limited, Srirangapatna. Printed at: Lotus Printers Pvt. Ltd., Bengaluru #4 Foreword The Masterclass series of eBooks brings together pedagogical articles on single broad top- ics taken from Resonance, the Journal of Science Education, that has been published monthly by the Indian Academy of Sciences since January 1996. Primarily directed at students and teachers at the undergraduate level, the journal has brought out a wide spectrum of articles in a range of scientific disciplines. Articles in the journal are written in a style that makes them accessible to readers from diverse backgrounds, and in addition, they provide a useful source of instruction that is not always available in textbooks. The sixth book in the series, ‘From So Simple A Beginning... The Expansion Of Evolu- tionary Thought’, is a collection of Resonance articles about scientists who made major con- tributions to the development of evolutionary biology, starting with Charles Darwin himself, collated and edited by Prof. T. N. C. -
Ellison Dissertationfinal .Pdf
Physiological Correlates of Bat Rabies Pathogenesis and Epizootiology by James Alec Ellison, Jr. A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the requirements for the Degree of Doctor of Philosophy Auburn, Alabama August 2, 2014 Keywords: bats; lyssavirus; rabies virus pathogenesis; thermography; surveillance; emerging infectious diseases Copyright 2014 by James Alec Ellison, Jr. Approved by Mary T. Mendonça, Chair, Professor, & Graduate Program Officer of Biological Sciences Charles E. Rupprecht, Professor of Public Health and Epidemiology Haruka Wada, Assistant Professor of Biological Sciences James Wright, Professor of Pathobiology Abstract Rabies virus (RABV) is one model pathogen to consider for studying the dynamics of emerging infectious diseases under both laboratory and field conditions. The evolutionary history of RABV is characterized by regularly documented spillover infections and a series of notable host shifts. RABV is not a single, genetically homogeneous and unvarying virus, but a virus that has undergone genetic changes in adapting to local hosts and local habitats, such that each variant occupies a unique ecologic niche. The opportunity for re-emergence of rabies in mesocarnivores and the likelihood of sustained transmission of RABV in different species is influenced in part by host and variant-specific factors. Understanding pathogen maintenance and transmission within the natural reservoir may facilitate early detection strategies and targeted interventions prior to human spillover. As such, the general focus of this dissertation is to integrate a contemporary molecular, comparative, and ecological approach to complement our existing knowledge on bat rabies epizootiology and pathogenesis. The multidisciplinary approach of Chapter 2 consists of examining the physiologic response and phylogenetic relationships among bat RABV variants circulating the United States, including those implicated in recent and historical spillover infections in humans and mesocarnivores. -
GLYCO 21 XXI International Symposium on Glycoconjugates
GLYCO 21 XXI International Symposium on Glycoconjugates Abstracts August 21-26, 2011 Vienna, Austria Glycoconj J (2011) 28: 197–36 9 Organising Committee Erika Staudacher (Austria) Leopold März (Austria) Günter Allmaier (Austria) Lothar Brecker (Austria) Josef Glössl (Austria) Hanspeter Kählig (Austria) Paul Kosma (Austria) Lukas Mach (Austria) Paul Messner (Austria) Walther Schmid (Austria) Igor Tvaroška (Slovakia) Reinhard Vlasak (Austria) Iain Wilson (Austria) Scientifi c Program Committee Iain Wilson (Austria) Paul Messner (Austria) Günter Allmaier (Austria) Reginald Bittner (Austria) Paul Kosma (Austria) Eva Stöger (Austria) Graham Warren (Austria) John Hanover (USA; nominated by the Society for Glycobiology) Kelly ten Hagen (USA; nominated by the Society for Glycobiology) supported in abstract selection by Michael Duchêne (Austria) Catherine Merry (UK) Tadashi Suzuki (Japan) Abstracts of the 21st International Symposium on Glycoconjugates The International Glycoconjugate Organisation Gerald W. Hart, President Leopold März, President-elect Paul Gleeson, Immediate Past-president Sandro Sonnino, Secretary Thierry Hennet, Treasurer National Representatives Pedro Bonay (Spain) to replace Angelo Reglero Nicolai Bovin (Russia) Jin Won Cho (Korea) Henrik Clausen (Denmark) Anne Dell (UK) Jukka Finne (Finland) Paul Gleeson (Australia) Jianxin Gu (China) Gerald Hart (USA) Thierry Hennet (Switzerland) Jim Jamieson (Canada) Gordan Lauc (Croatia) Hakon Leffl er (Sweden) Jean-Claude Michalski (France) Werner Reutter (Germany) Sandro Sonnino (Italy) Avadhesha Surolia (India) Ken Kitajima (Japan) Maciej Ugorski (Poland) Johannes F.G. Vliegenthart (The Netherlands) Iain Wilson (Austria) to replace Leopold März Albert M. Wu (Taiwan) Lode Wyns (Belgium) Yehiel Zick (Israel) Glycoconj J (2011) 28: 197–369 Past Presidents Eugene. A. Davidson (USA) Alan B. Foster (UK) Paul Gleeson (Australia) Mary Catherine Glick (USA) Colin Hughes (UK) Roger W. -
Early Members of the Genus Homo -. EXPLORATIONS: an OPEN INVITATION to BIOLOGICAL ANTHROPOLOGY
EXPLORATIONS: AN OPEN INVITATION TO BIOLOGICAL ANTHROPOLOGY Editors: Beth Shook, Katie Nelson, Kelsie Aguilera and Lara Braff American Anthropological Association Arlington, VA 2019 Explorations: An Open Invitation to Biological Anthropology is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License, except where otherwise noted. ISBN – 978-1-931303-63-7 www.explorations.americananthro.org 10. Early Members of the Genus Homo Bonnie Yoshida-Levine Ph.D., Grossmont College Learning Objectives • Describe how early Pleistocene climate change influenced the evolution of the genus Homo. • Identify the characteristics that define the genus Homo. • Describe the skeletal anatomy of Homo habilis and Homo erectus based on the fossil evidence. • Assess opposing points of view about how early Homo should be classified. Describe what is known about the adaptive strategies of early members of the Homo genus, including tool technologies, diet, migration patterns, and other behavioral trends.The boy was no older than 9 when he perished by the swampy shores of the lake. After death, his slender, long-limbed body sank into the mud of the lake shallows. His bones fossilized and lay undisturbed for 1.5 million years. In the 1980s, fossil hunter Kimoya Kimeu, working on the western shore of Lake Turkana, Kenya, glimpsed a dark colored piece of bone eroding in a hillside. This small skull fragment led to the discovery of what is arguably the world’s most complete early hominin fossil—a youth identified as a member of the species Homo erectus. Now known as Nariokotome Boy, after the nearby lake village, the skeleton has provided a wealth of information about the early evolution of our own genus, Homo (see Figure 10.1). -
The Treeness of the Tree of Historical Trees of Life
RESEARCH ARTICLE The treeness of the tree of historical trees of life 1 2 3 1 Marie Fisler , CeÂdric CreÂmière , Pierre Darlu , Guillaume LecointreID * 1 UMR 7205 CNRS-MNHN-SU-EPHE « Institut de SysteÂmatique, Evolution et Biodiversite », deÂpartement « Origines & E volution », MuseÂum National d'Histoire Naturelle, Paris, France, 2 MuseÂe d'Histoire Naturelle du Havre, Place du vieux marcheÂ, Le Havre, France, 3 UMR 7206 CNRS-MNHN-UPD « Eco-anthropologie et Ethnobiologie », deÂpartement « Hommes, Nature et SocieÂteÂs », MuseÂum National d'Histoire Naturelle, Paris, France a1111111111 * [email protected] a1111111111 a1111111111 a1111111111 Abstract a1111111111 This paper compares and categorizes historical ideas about trees showing relationships among biological entities. The hierarchical structure of a tree is used to test the global con- sistency of similarities among these ideas; in other words we assess the ªtreenessº of the OPEN ACCESS tree of historical trees. The collected data are figures and ideas about trees showing rela- Citation: Fisler M, CreÂmière C, Darlu P, Lecointre G tionships among biological entities published or drawn by naturalists from 1555 to 2012. (2020) The treeness of the tree of historical trees of They are coded into a matrix of 235 historical trees and 141 descriptive attributes. From the life. PLoS ONE 15(1): e0226567. https://doi.org/ most parsimonious ªtreeº of historical trees, treeness is measured by consistency index, 10.1371/journal.pone.0226567 retention index and homoplasy excess ratio. This tree is used to create sets or categories of Editor: Marc Robinson-Rechavi, Universite de trees, or to study the circulation of ideas. From an unrooted network of historical trees, tree- Lausanne Faculte de biologie et medecine, ness is measured by the delta-score. -
Agustín Fuentes Department of Anthropology, 123 Aaron Burr Hall, Princeton University, Princeton NJ 08544 Email: [email protected]
Agustín Fuentes Department of Anthropology, 123 Aaron Burr Hall, Princeton University, Princeton NJ 08544 email: [email protected] EDUCATION: 1994 Ph.D. Anthropology, University of California, Berkeley 1991 M.A. Anthropology, University of California, Berkeley 1989 B.A. Anthropology and Zoology, University of California, Berkeley ACADEMIC POSITIONS: 2020-present Professor, Department of Anthropology, Princeton University 2017-2020 The Edmund P. Joyce, C.S.C., Professor of Anthropology, University of Notre Dame 2013-2020 Chair, Department of Anthropology, University of Notre Dame 2008-2020 Professor, Department of Anthropology, University of Notre Dame 2008-2011 Director, Institute for Scholarship in the Liberal Arts, University of Notre Dame 2005-2008 Nancy O’Neill Associate Professor of Anthropology, University of Notre Dame 2004-2008 Flatley Director, Office for Undergraduate and Post-Baccalaureate Fellowships, University of Notre Dame 2002-2008 Associate Professor, Department of Anthropology, University of Notre Dame 2000-2002 Associate Professor, Department of Anthropology, Central Washington University 1999-2002 Director, Primate Behavior and Ecology Bachelor of Science Program, Interdisciplinary Major-Departments of Anthropology, Biological Sciences and Psychology, Central Washington University 1998-2002 Graduate Faculty, Department of Psychology and Resource Management Master’s Program, Central Washington University 1996-2000 Assistant Professor, Department of Anthropology, Central Washington University 1995-1996 Lecturer, -
Re-Emergence of Yellow Fever in the Neotropics — Quo Vadis?
Emerging Topics in Life Sciences (2020) 4 411–422 https://doi.org/10.1042/ETLS20200187 Perspective Re-emergence of yellow fever in the neotropics — quo vadis? Livia Sacchetto1,*, Betania P. Drumond1, Barbara A. Han2, Mauricio L. Nogueira3 and Nikos Vasilakis4,5,6,7,8 1Department of Microbiology, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil; 2Cary Institute of Ecosystem Studies, Millbrook, NY 12545, U.S.A.; 3Department of Dermatological, Infectious and Parasitic Diseases, Faculdade de Medicina de São José do Rio Preto, São José do Rio Preto, São Paulo, Brazil; 4Department of Pathology, University of Texas Medical Branch, Galveston, Texas, U.S.A.; 5Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, Texas, U.S.A.; 6Center for Tropical Diseases, University of Texas Medical Branch, Galveston, Texas, U.S.A.; 7Institute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, Texas, U.S.A.; 8Center for Vector-Borne and Zoonotic Diseases, University of Texas Medical Branch, Galveston, Texas, USA Correspondence: Nikos Vasilakis ([email protected]) Yellow fever virus (YFV) is the etiological agent of yellow fever (YF), an acute hemorrhagic vector-borne disease with a significant impact on public health, is endemic across trop- ical regions in Africa and South America. The virus is maintained in two ecologically and evolutionary distinct transmission cycles: an enzootic, sylvatic cycle, where the virus cir- culates between arboreal Aedes species mosquitoes and non-human primates, and a human or urban cycle, between humans and anthropophilic Aedes aegypti mosquitoes. While the urban transmission cycle has been eradicated by a highly efficacious licensed vaccine, the enzootic transmission cycle is not amenable to control interventions, leading to recurrent epizootics and spillover outbreaks into human populations.