Statistical Theory
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Computing the Oja Median in R: the Package Ojanp
Computing the Oja Median in R: The Package OjaNP Daniel Fischer Karl Mosler Natural Resources Institute of Econometrics Institute Finland (Luke) and Statistics Finland University of Cologne and Germany School of Health Sciences University of Tampere Finland Jyrki M¨ott¨onen Klaus Nordhausen Department of Social Research Department of Mathematics University of Helsinki and Statistics Finland University of Turku Finland and School of Health Sciences University of Tampere Finland Oleksii Pokotylo Daniel Vogel Cologne Graduate School Institute of Complex Systems University of Cologne and Mathematical Biology Germany University of Aberdeen United Kingdom June 27, 2016 arXiv:1606.07620v1 [stat.CO] 24 Jun 2016 Abstract The Oja median is one of several extensions of the univariate median to the mul- tivariate case. It has many nice properties, but is computationally demanding. In this paper, we first review the properties of the Oja median and compare it to other multivariate medians. Afterwards we discuss four algorithms to compute the Oja median, which are implemented in our R-package OjaNP. Besides these 1 algorithms, the package contains also functions to compute Oja signs, Oja signed ranks, Oja ranks, and the related scatter concepts. To illustrate their use, the corresponding multivariate one- and C-sample location tests are implemented. Keywords Oja median, Oja signs, Oja signed ranks, Oja ranks, R,C,C++ 1 Introduction The univariate median is a popular location estimator. It is, however, not straightforward to generalize it to the multivariate case since no generalization known retains all properties of univariate estimator, and therefore different gen- eralizations emphasize different properties of the univariate median. -
WHAT DID FISHER MEAN by an ESTIMATE? 3 Ideas but Is in Conflict with His Ideology of Statistical Inference
Submitted to the Annals of Applied Probability WHAT DID FISHER MEAN BY AN ESTIMATE? By Esa Uusipaikka∗ University of Turku Fisher’s Method of Maximum Likelihood is shown to be a proce- dure for the construction of likelihood intervals or regions, instead of a procedure of point estimation. Based on Fisher’s articles and books it is justified that by estimation Fisher meant the construction of likelihood intervals or regions from appropriate likelihood function and that an estimate is a statistic, that is, a function from a sample space to a parameter space such that the likelihood function obtained from the sampling distribution of the statistic at the observed value of the statistic is used to construct likelihood intervals or regions. Thus Problem of Estimation is how to choose the ’best’ estimate. Fisher’s solution for the problem of estimation is Maximum Likeli- hood Estimate (MLE). Fisher’s Theory of Statistical Estimation is a chain of ideas used to justify MLE as the solution of the problem of estimation. The construction of confidence intervals by the delta method from the asymptotic normal distribution of MLE is based on Fisher’s ideas, but is against his ’logic of statistical inference’. Instead the construc- tion of confidence intervals from the profile likelihood function of a given interest function of the parameter vector is considered as a solution more in line with Fisher’s ’ideology’. A new method of cal- culation of profile likelihood-based confidence intervals for general smooth interest functions in general statistical models is considered. 1. Introduction. ’Collected Papers of R.A. -
The Likelihood Principle
1 01/28/99 ãMarc Nerlove 1999 Chapter 1: The Likelihood Principle "What has now appeared is that the mathematical concept of probability is ... inadequate to express our mental confidence or diffidence in making ... inferences, and that the mathematical quantity which usually appears to be appropriate for measuring our order of preference among different possible populations does not in fact obey the laws of probability. To distinguish it from probability, I have used the term 'Likelihood' to designate this quantity; since both the words 'likelihood' and 'probability' are loosely used in common speech to cover both kinds of relationship." R. A. Fisher, Statistical Methods for Research Workers, 1925. "What we can find from a sample is the likelihood of any particular value of r [a parameter], if we define the likelihood as a quantity proportional to the probability that, from a particular population having that particular value of r, a sample having the observed value r [a statistic] should be obtained. So defined, probability and likelihood are quantities of an entirely different nature." R. A. Fisher, "On the 'Probable Error' of a Coefficient of Correlation Deduced from a Small Sample," Metron, 1:3-32, 1921. Introduction The likelihood principle as stated by Edwards (1972, p. 30) is that Within the framework of a statistical model, all the information which the data provide concerning the relative merits of two hypotheses is contained in the likelihood ratio of those hypotheses on the data. ...For a continuum of hypotheses, this principle -
Annual Report of the Center for Statistical Research and Methodology Research and Methodology Directorate Fiscal Year 2017
Annual Report of the Center for Statistical Research and Methodology Research and Methodology Directorate Fiscal Year 2017 Decennial Directorate Customers Demographic Directorate Customers Missing Data, Edit, Survey Sampling: and Imputation Estimation and CSRM Expertise Modeling for Collaboration Economic and Research Experimentation and Record Linkage Directorate Modeling Customers Small Area Simulation, Data Time Series and Estimation Visualization, and Seasonal Adjustment Modeling Field Directorate Customers Other Internal and External Customers ince August 1, 1933— S “… As the major figures from the American Statistical Association (ASA), Social Science Research Council, and new Roosevelt academic advisors discussed the statistical needs of the nation in the spring of 1933, it became clear that the new programs—in particular the National Recovery Administration—would require substantial amounts of data and coordination among statistical programs. Thus in June of 1933, the ASA and the Social Science Research Council officially created the Committee on Government Statistics and Information Services (COGSIS) to serve the statistical needs of the Agriculture, Commerce, Labor, and Interior departments … COGSIS set … goals in the field of federal statistics … (It) wanted new statistical programs—for example, to measure unemployment and address the needs of the unemployed … (It) wanted a coordinating agency to oversee all statistical programs, and (it) wanted to see statistical research and experimentation organized within the federal government … In August 1933 Stuart A. Rice, President of the ASA and acting chair of COGSIS, … (became) assistant director of the (Census) Bureau. Joseph Hill (who had been at the Census Bureau since 1900 and who provided the concepts and early theory for what is now the methodology for apportioning the seats in the U.S. -
The Theory of the Design of Experiments
The Theory of the Design of Experiments D.R. COX Honorary Fellow Nuffield College Oxford, UK AND N. REID Professor of Statistics University of Toronto, Canada CHAPMAN & HALL/CRC Boca Raton London New York Washington, D.C. C195X/disclaimer Page 1 Friday, April 28, 2000 10:59 AM Library of Congress Cataloging-in-Publication Data Cox, D. R. (David Roxbee) The theory of the design of experiments / D. R. Cox, N. Reid. p. cm. — (Monographs on statistics and applied probability ; 86) Includes bibliographical references and index. ISBN 1-58488-195-X (alk. paper) 1. Experimental design. I. Reid, N. II.Title. III. Series. QA279 .C73 2000 001.4 '34 —dc21 00-029529 CIP This book contains information obtained from authentic and highly regarded sources. Reprinted material is quoted with permission, and sources are indicated. A wide variety of references are listed. Reasonable efforts have been made to publish reliable data and information, but the author and the publisher cannot assume responsibility for the validity of all materials or for the consequences of their use. Neither this book nor any part may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopying, microfilming, and recording, or by any information storage or retrieval system, without prior permission in writing from the publisher. The consent of CRC Press LLC does not extend to copying for general distribution, for promotion, for creating new works, or for resale. Specific permission must be obtained in writing from CRC Press LLC for such copying. Direct all inquiries to CRC Press LLC, 2000 N.W. -
Chapter 5 Statistical Inference
Chapter 5 Statistical Inference CHAPTER OUTLINE Section 1 Why Do We Need Statistics? Section 2 Inference Using a Probability Model Section 3 Statistical Models Section 4 Data Collection Section 5 Some Basic Inferences In this chapter, we begin our discussion of statistical inference. Probability theory is primarily concerned with calculating various quantities associated with a probability model. This requires that we know what the correct probability model is. In applica- tions, this is often not the case, and the best we can say is that the correct probability measure to use is in a set of possible probability measures. We refer to this collection as the statistical model. So, in a sense, our uncertainty has increased; not only do we have the uncertainty associated with an outcome or response as described by a probability measure, but now we are also uncertain about what the probability measure is. Statistical inference is concerned with making statements or inferences about char- acteristics of the true underlying probability measure. Of course, these inferences must be based on some kind of information; the statistical model makes up part of it. Another important part of the information will be given by an observed outcome or response, which we refer to as the data. Inferences then take the form of various statements about the true underlying probability measure from which the data were obtained. These take a variety of forms, which we refer to as types of inferences. The role of this chapter is to introduce the basic concepts and ideas of statistical inference. The most prominent approaches to inference are discussed in Chapters 6, 7, and 8. -
Identification of Empirical Setting
Chapter 1 Identification of Empirical Setting Purpose for Identifying the Empirical Setting The purpose of identifying the empirical setting of research is so that the researcher or research manager can appropriately address the following issues: 1) Understand the type of research to be conducted, and how it will affect the design of the research investigation, 2) Establish clearly the goals and objectives of the research, and how these translate into testable research hypothesis, 3) Identify the population from which inferences will be made, and the limitations of the sample drawn for purposes of the investigation, 4) To understand the type of data obtained in the investigation, and how this will affect the ensuing analyses, and 5) To understand the limits of statistical inference based on the type of analyses and data being conducted, and this will affect final study conclusions. Inputs/Assumptions Assumed of the Investigator It is assumed that several important steps in the process of conducting research have been completed before using this part of the manual. If any of these stages has not been completed, then the researcher or research manager should first consult Volume I of this manual. 1) A general understanding of research concepts introduced in Volume I including principles of scientific inquiry and the overall research process, 2) A research problem statement with accompanying research objectives, and 3) Data or a data collection plan. Outputs/Products of this Chapter After consulting this chapter, the researcher or research -
Statistical Inference: Paradigms and Controversies in Historic Perspective
Jostein Lillestøl, NHH 2014 Statistical inference: Paradigms and controversies in historic perspective 1. Five paradigms We will cover the following five lines of thought: 1. Early Bayesian inference and its revival Inverse probability – Non-informative priors – “Objective” Bayes (1763), Laplace (1774), Jeffreys (1931), Bernardo (1975) 2. Fisherian inference Evidence oriented – Likelihood – Fisher information - Necessity Fisher (1921 and later) 3. Neyman- Pearson inference Action oriented – Frequentist/Sample space – Objective Neyman (1933, 1937), Pearson (1933), Wald (1939), Lehmann (1950 and later) 4. Neo - Bayesian inference Coherent decisions - Subjective/personal De Finetti (1937), Savage (1951), Lindley (1953) 5. Likelihood inference Evidence based – likelihood profiles – likelihood ratios Barnard (1949), Birnbaum (1962), Edwards (1972) Classical inference as it has been practiced since the 1950’s is really none of these in its pure form. It is more like a pragmatic mix of 2 and 3, in particular with respect to testing of significance, pretending to be both action and evidence oriented, which is hard to fulfill in a consistent manner. To keep our minds on track we do not single out this as a separate paradigm, but will discuss this at the end. A main concern through the history of statistical inference has been to establish a sound scientific framework for the analysis of sampled data. Concepts were initially often vague and disputed, but even after their clarification, various schools of thought have at times been in strong opposition to each other. When we try to describe the approaches here, we will use the notions of today. All five paradigms of statistical inference are based on modeling the observed data x given some parameter or “state of the world” , which essentially corresponds to stating the conditional distribution f(x|(or making some assumptions about it). -
On the Relation Between Frequency Inference and Likelihood
On the Relation between Frequency Inference and Likelihood Donald A. Pierce Radiation Effects Research Foundation 5-2 Hijiyama Park Hiroshima 732, Japan [email protected] 1. Introduction Modern higher-order asymptotic theory for frequency inference, as largely described in Barn- dorff-Nielsen & Cox (1994), is fundamentally likelihood-oriented. This has led to various indica- tions of more unity in frequency and Bayesian inferences than previously recognised, e.g. Sweeting (1987, 1992). A main distinction, the stronger dependence of frequency inference on the sample space—the outcomes not observed—is isolated in a single term of the asymptotic formula for P- values. We capitalise on that to consider from an asymptotic perspective the relation of frequency inferences to the likelihood principle, with results towards a quantification of that as follows. Whereas generally the conformance of frequency inference to the likelihood principle is only to first order, i.e. O(n–1/2), there is at least one major class of applications, likely more, where the confor- mance is to second order, i.e. O(n–1). There the issue is the effect of censoring mechanisms. On a more subtle point, it is often overlooked that there are few, if any, practical settings where exact frequency inferences exist broadly enough to allow precise comparison to the likelihood principle. To the extent that ideal frequency inference may only be defined to second order, there is some- times—perhaps usually—no conflict at all. The strong likelihood principle is that in even totally unrelated experiments, inferences from data yielding the same likelihood function should be the same (the weak one being essentially the sufficiency principle). -
Estimation Methods in Multilevel Regression
Newsom Psy 526/626 Multilevel Regression, Spring 2019 1 Multilevel Regression Estimation Methods for Continuous Dependent Variables General Concepts of Maximum Likelihood Estimation The most commonly used estimation methods for multilevel regression are maximum likelihood-based. Maximum likelihood estimation (ML) is a method developed by R.A.Fisher (1950) for finding the best estimate of a population parameter from sample data (see Eliason,1993, for an accessible introduction). In statistical terms, the method maximizes the joint probability density function (pdf) with respect to some distribution. With independent observations, the joint probability of the distribution is a product function of the individual probabilities of events, so ML finds the likelihood of the collection of observations from the sample. In other words, it computes the estimate of the population parameter value that is the optimal fit to the observed data. ML has a number of preferred statistical properties, including asymptotic consistency (approaches the parameter value with increasing sample size), efficiency (lower variance than other estimators), and parameterization invariance (estimates do not change when measurements or parameters are transformed in allowable ways). Distributional assumptions are necessary, however, and there are potential biases in significance tests when using ML. ML can be seen as a more general method that encompasses ordinary least squares (OLS), where sample estimates of the population mean and regression parameters are equivalent for the two methods under regular conditions. ML is applied more broadly across statistical applications, including categorical data analysis, logistic regression, and structural equation modeling. Iterative Process For more complex problems, ML is an iterative process [for multilevel regression, usually Expectation- Maximization (EM) or iterative generalized least squares (IGLS) is used] in which initial (or “starting”) values are used first. -
Akaike's Information Criterion
ESCI 340 Biostatistical Analysis Model Selection with Information Theory "Far better an approximate answer to the right question, which is often vague, than an exact answer to the wrong question, which can always be made precise." − John W. Tukey, (1962), "The future of data analysis." Annals of Mathematical Statistics 33, 1-67. 1 Problems with Statistical Hypothesis Testing 1.1 Indirect approach: − effort to reject null hypothesis (H0) believed to be false a priori (statistical hypotheses are not the same as scientific hypotheses) 1.2 Cannot accommodate multiple hypotheses (e.g., Chamberlin 1890) 1.3 Significance level (α) is arbitrary − will obtain "significant" result if n large enough 1.4 Tendency to focus on P-values rather than magnitude of effects 2 Practical Alternative: Direct Evaluation of Multiple Hypotheses 2.1 General Approach: 2.1.1 Develop multiple hypotheses to answer research question. 2.1.2 Translate each hypothesis into a model. 2.1.3 Fit each model to the data (using least squares, maximum likelihood, etc.). (fitting model ≅ estimating parameters) 2.1.4 Evaluate each model using information criterion (e.g., AIC). 2.1.5 Select model that performs best, and determine its likelihood. 2.2 Model Selection Criterion 2.2.1 Akaike Information Criterion (AIC): relates information theory to maximum likelihood ˆ AIC = −2loge[L(θ | data)]+ 2K θˆ = estimated model parameters ˆ loge[L(θ | data)] = log-likelihood, maximized over all θ K = number of parameters in model Select model that minimizes AIC. 2.2.2 Modification for complex models (K large relative to sample size, n): 2K(K +1) AIC = −2log [L(θˆ | data)]+ 2K + c e n − K −1 use AICc when n/K < 40. -
Plausibility Functions and Exact Frequentist Inference
Plausibility functions and exact frequentist inference Ryan Martin Department of Mathematics, Statistics, and Computer Science University of Illinois at Chicago [email protected] July 6, 2018 Abstract In the frequentist program, inferential methods with exact control on error rates are a primary focus. The standard approach, however, is to rely on asymptotic ap- proximations, which may not be suitable. This paper presents a general framework for the construction of exact frequentist procedures based on plausibility functions. It is shown that the plausibility function-based tests and confidence regions have the desired frequentist properties in finite samples—no large-sample justification needed. An extension of the proposed method is also given for problems involving nuisance parameters. Examples demonstrate that the plausibility function-based method is both exact and efficient in a wide variety of problems. Keywords and phrases: Bootstrap; confidence region; hypothesis test; likeli- hood; Monte Carlo; p-value; profile likelihood. 1 Introduction In the Neyman–Pearson program, construction of tests or confidence regions having con- trol over frequentist error rates is an important problem. But, despite its importance, there seems to be no general strategy for constructing exact inferential methods. When an exact pivotal quantity is not available, the usual strategy is to select some summary statistic and derive a procedure based on the statistic’s asymptotic sampling distribu- tion. First-order methods, such as confidence regions based on asymptotic normality arXiv:1203.6665v4 [math.ST] 12 Mar 2014 of the maximum likelihood estimator, are known to be inaccurate in certain problems. Procedures with higher-order accuracy are also available (e.g., Brazzale et al.