Field Studies Reveal a Close Relative of C. Elegans Thrives in the Fresh Figs
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Assessment of Pathogenic Bacteria Transfer from Pristionchus
Assessment of Pathogenic Bacteria Transfer From Pristionchus Entomophagus (Nematoda: Diplogasteridae) to the Invasive Ant Myrmica Rubra and Its Potential Role in Colony Mortality in Coastal Maine Suzanne Lynn Ishaq ( [email protected] ) School of Food and Agriculture, University of Maine, Orono, ME 04469 https://orcid.org/0000-0002- 2615-8055 Alice Hotopp University of Maine Samantha Silverbrand University of Maine Jonathan E. Dumont Husson University Amy Michaud University of California Davis Jean MacRae University of Maine S. Patricia Stock University of Arizona Eleanor Groden University of Maine Research Article Keywords: bacterial community, biological control, microbial transfer, nematodes, Illumina, Galleria mellonella larvae Posted Date: November 5th, 2020 DOI: https://doi.org/10.21203/rs.3.rs-101817/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/38 Abstract Background: Necromenic nematode Pristionchus entomophagus has been frequently found in nests of the invasive European ant Myrmica rubra in coastal Maine, United States. The nematodes may contribute to ant mortality and collapse of colonies by transferring environmental bacteria. M. rubra ants naturally hosting nematodes were collected from collapsed wild nests in Maine and used for bacteria identication. Virulence assays were carried out to validate acquisition and vectoring of environmental bacteria to the ants. Results: Multiple bacteria species, including Paenibacillus spp., were found in the nematodes’ digestive tract. Serratia marcescens, Serratia nematodiphila, and Pseudomonas uorescens were collected from the hemolymph of nematode-infected Galleria mellonella larvae. Variability was observed in insect virulence in relation to the site origin of the nematodes. In vitro assays conrmed uptake of RFP-labeled Pseudomonas aeruginosa strain PA14 by nematodes. -
Zhylina, Shevchenko.Pdf
ЕКОЛОГІЯ H. B. Humenyuk, V. O. Khomenchuk, N. G. Zinkovska Ternopil Volodymyr Hnatiuk National Pedagogical University, Ukraine Taras Shevchenko Regional Humanitarian-Pedagogical Academy of Kremenets, Ukraine TYPES OF MODELLING THE ENVIRONMENT AND PECULIARITIES OF THEIR USE It is found that mathematical or imitating modeling is one of the most useful and effective forms of modeling, which represent the most significant features of real objects, processes, systems and phenomena studied by various sciences. The main purpose of factor analysis - reducing the dimension of the source data for the purpose of economical description by providing minimal loss of the initial information. The result of factor analysis is the transition from the set output variables to significantly fewer new variables - factors. Factor is interpreted as a common cause of the variability of the multiple output variables. The value of the revealed factors is 4,37 and 1.98 respectively. The selected factors include 79,5% of general dispersion (54,7 and 24,8 % respectively). Thus the accumulated percentage of both factors dispersion (79,5 %) defines how fully we can describe the set of date with the help of selected factors. The higher this index is the larger part of the data was factorized and the more credible the factorial model is. In widespread application of modeling in solving the problem of knowledge and environmental protection the combination of two tendencies which are characteristic of the modern science are singled out – cybernation and ecologization. The information systems are used to choose the optimal ways of different resources application in order to predict the consequences of environmental pollution. -
Molecular Markers, Indicator Taxa, and Community Indices: the Issue of Bioindication Accuracy
NEMATODES AS ENVIRONMENTAL INDICATORS This page intentionally left blank NEMATODES AS ENVIRONMENTAL INDICATORS Edited by Michael J. Wilson Institute of Biological and Environmental Sciences, The University of Aberdeen, Aberdeen, Scotland, UK Thomais Kakouli-Duarte EnviroCORE Department of Science and Health, Institute of Technology, Carlow, Ireland CABI is a trading name of CAB International CABI Head Office CABI North American Office Nosworthy Way 875 Massachusetts Avenue Wallingford 7th Floor Oxfordshire OX10 8DE Cambridge, MA 02139 UK USA Tel: +44 (0)1491 832111 Tel: +1 617 395 4056 Fax: +44 (0)1491 833508 Fax: +1 617 354 6875 E-mail: [email protected] E-mail: [email protected] Website: www.cabi.org © CAB International 2009. All rights reserved. No part of this publication may be reproduced in any form or by any means, electronically, mechanically, by photocopying, recording or otherwise, without the prior permission of the copyright owners. A catalogue record for this book is available from the British Library, London, UK. Library of Congress Cataloging-in-Publication Data Nematodes as environmental indicators / edited by Michael J. Wilson, Thomais Kakouli-Duarte. p. cm. Includes bibliographical references and index. ISBN 978-1-84593-385-2 (alk. paper) 1. Nematodes–Ecology. 2. Indicators (Biology) I. Wilson, Michael J. (Michael John), 1964- II. Kakouli-Duarte, Thomais. III. Title. QL391.N4N382 2009 592'.5717--dc22 2008049111 ISBN-13: 978 1 84593 385 2 Typeset by SPi, Pondicherry, India. Printed and bound in the UK by the MPG Books Group. The paper used for the text pages in this book is FSC certified. The FSC (Forest Stewardship Council) is an international network to promote responsible man- agement of the world’s forests. -
A White Paper on Nematode Comparative Genomics David Mck
View metadata, citation and similar papers at core.ac.uk brought to you by CORE Journal of Nematology 37(4):408–416. 2005. © The Society of Nematologistsprovided 2005.by UGD Academic Repository A White Paper on Nematode Comparative Genomics David McK. Bird,1 Mark L. Blaxter,2 James P. McCarter,3,4 Makedonka Mitreva,3 Paul W. Sternberg,5 W. Kelley Thomas6 Abstract: In response to the new opportunities for genome sequencing and comparative genomics, the Society of Nematology (SON) formed a committee to develop a white paper in support of the broad scientific needs associated with this phylum and interests of SON members. Although genome sequencing is expensive, the data generated are unique in biological systems in that genomes have the potential to be complete (every base of the genome can be accounted for), accurate (the data are digital and not subject to stochastic variation), and permanent (once obtained, the genome of a species does not need to be experimentally re-sampled). The availability of complete, accurate, and permanent genome sequences from diverse nematode species will underpin future studies into the biology and evolution of this phylum and the ecological associations (particularly parasitic) nematodes have with other organisms. We anticipate that upwards of 100 nematode genomes will be solved to varying levels of completion in the coming decade and suggest biological and practical considerations to guide the selection of the most informative taxa for sequenc- ing. Key words: Caenorhabditis elegans, comparative genomics, genome sequencing, systematics. The “discipline” of genomics arguably began with a on C. elegans, it was clear to the C. -
Alteration of Microflora of the Facultative Parasitic Nematode Pristionchus Entomophagus and Its Potential Application As a Biological Control Agent
The University of Maine DigitalCommons@UMaine Honors College 5-2013 Alteration of Microflora of the Facultative Parasitic Nematode Pristionchus Entomophagus and its Potential Application as a Biological Control Agent Amy M. Michaud University of Maine - Main Follow this and additional works at: https://digitalcommons.library.umaine.edu/honors Part of the Biology Commons, Entomology Commons, and the Parasitology Commons Recommended Citation Michaud, Amy M., "Alteration of Microflora of the Facultative Parasitic Nematode Pristionchus Entomophagus and its Potential Application as a Biological Control Agent" (2013). Honors College. 134. https://digitalcommons.library.umaine.edu/honors/134 This Honors Thesis is brought to you for free and open access by DigitalCommons@UMaine. It has been accepted for inclusion in Honors College by an authorized administrator of DigitalCommons@UMaine. For more information, please contact [email protected]. ALTERATION OF MICROFLORA OF THE FACULTATIVE PARASITIC NEMATODE PRISTIONCHUS ENTOMOPHAGUS AND ITS POTENTIAL APPLICATION AS A BIOLOGICAL CONTROL AGENT by Amy M. Michaud A Thesis Submitted in Partial Fulfillment of the Requirements for a Degree with Honors (Biology) The Honors College University of Maine May 2013 Advisory Committee: Dr. Eleanor Groden, Professor of Entomology, Advisor Dr. Dave Lambert, Associate Professor of Plant Pathology Elissa Ballman, Research Associate in Invasive Species and Entomology Dr. Francois Amar, Associate Professor of Physical Chemistry Dr. John Singer, Professor of Microbiology Abstract: Pristionchus entomophagus is a microbivorous, facultative, parasitic nematode commonly found in soil and decaying organic matter in North America and Europe. This nematode can form an alternative juvenile life stage capable of infecting an insect host. The microflora of P. -
Zootaxa,Comparison of the Cryptic Nematode Species Caenorhabditis
Zootaxa 1456: 45–62 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Comparison of the cryptic nematode species Caenorhabditis brenneri sp. n. and C. remanei (Nematoda: Rhabditidae) with the stem species pattern of the Caenorhabditis Elegans group WALTER SUDHAUS1 & KARIN KIONTKE2 1Institut für Biologie/Zoologie, AG Evolutionsbiologie, Freie Universität Berlin, Königin-Luise Straße 1-3, 14195 Berlin, Germany. [email protected] 2Department of Biology, New York University, 100 Washington Square E., New York, NY10003, USA. [email protected] Abstract The new gonochoristic member of the Caenorhabditis Elegans group, C. brenneri sp. n., is described. This species is reproductively isolated at the postmating level from its sibling species, C. remanei. Between these species, only minute morphological differences are found, but there are substantial genetic differences. The stem species pattern of the Ele- gans group is reconstructed. C. brenneri sp. n. deviates from this character pattern only in small diagnostic characters. In mating tests of C. brenneri sp. n. females with C. remanei males, fertilization takes place and juveniles occasionally hatch. In the reverse combination, no offspring were observed. Individuals from widely separated populations of each species can be crossed successfully (e.g. C. brenneri sp. n. populations from Guadeloupe and Sumatra, or C. remanei populations from Japan and Germany). Both species have been isolated only from anthropogenic habitats, rich in decom- posing organic material. C. brenneri sp. n. is distributed circumtropically, C. remanei is only found in northern temperate regions. To date, no overlap of the ranges was found. -
Speciation and Adaptive Radiation in the Fig Wasp Nematode, Parasitodiplagaster (Diplogasteridae : Rhabditida) in Panama George O
Speciation and adaptive radiation in the fig wasp nematode, Parasitodiplagaster (Diplogasteridae : Rhabditida) in Panama George O. POINAR,Jr. and Edward A. HERRE Department of Entomological Sciences, University of California, Berkeley, CA 94720, USA and Snzithsonian Tropical Research Institute,Apartado 2072, Balboa, Republic of Panama, SUMMARY The following species of the hereby redefined genus Parasitodiplogaster are described from fruits of Ficus spp. in Panama : P. citrinema n. sp. from F. citrifolia P. Miller, P. duganema n. sp. from F. dugandii Standl., P. mminema n. sp. from F. maxima P. Miller, P. nymphanema n. sp. frorn E nymphaeifolia L., P. obtusinema n. sp. frorn E obtusifolia HBK, P. paranema n. sp. from F. paraensis (Miq.) Miq., P. pertanema n. sp. from F. pertusa L. f., P. popenema n. sp. from E popenoei Standl., P. trigonema n. sp. from E trigonata L. and P. yoponema n. sp. from E yoponensis Desv. Al1 of the above species, which are presumed to have evolved from a free-living diplogasterid stem species, represent alloparric species which are carriedby specific figwasp species to specific fig fruitspecies. The diverse morphological characters (especially those ofthe alimentary tract) exhibited among these ten new species of fig wasp nematodes represent examplesof selective adaptation to physical and nutritional conditions foundin the fruits (sycones) of the different fig species. &SUME Spéciation et divergence adaptative chez le nématode de la guêpe du figuierParasitodiplogaster (Rhabditida :Diplogasteridae) au Panama Le genre Parasitodiplogaster est redéfini et les espèces nouvelles suivantes, provenant de fruits de Ficus spp. au Panama, sont décrites :P. citrinema n. sp. surE citrifolia P. -
Management of the Invasive Alien Snail Cantareus Aspersus on Conservation Land
Management of the invasive alien snail Cantareus aspersus on conservation land DOC SCIENCE INTERNAL SERIES 31 Gary M. Barker and Corinne Watts Published by Department of Conservation P.O. Box 10-420 Wellington, New Zealand DOC Science Internal Series is a published record of scientific research carried out, or advice given, by Department of Conservation staff, or external contractors funded by DOC. It comprises progress reports and short communications that are generally peer-reviewed within DOC, but not always externally refereed. Fully refereed contract reports funded from the Conservation Services Levy are also included. Individual contributions to the series are first released on the departmental intranet in pdf form. Hardcopy is printed, bound, and distributed at regular intervals. Titles are listed in the DOC Science Publishing catalogue on the departmental website http://www.doc.govt.nz and electronic copies of CSL papers can be downloaded from http://csl.doc.govt.nz © January 2002, New Zealand Department of Conservation ISSN 1175–6519 ISBN 0–478–22206–8 This is a client report commissioned by Northland Conservancy and funded from the Unprogrammed Science Advice fund. It was prepared for publication by DOC Science Publishing, Science & Research Unit; editing and layout by Geoff Gregory. Publication was approved by the Manager, Science & Research Unit, Science Technology and Information Services, Department of Conservation, Wellington. CONTENTS Abstract 5 1. Introduction 6 1.1 Objectives 7 2. Principles of mollusc pest management 8 2.1 Control options 8 2.1.1 Biological control 8 2.1.2 Manual control 9 2.1.3 Chemical control 9 2.2 Control strategies 11 2.3 Control success with molluscicidal baits 11 3. -
Downloading the Zinc-Finger Motif from the Gag Protein Must Have Assembly Files and Executing the Ipython Notebook Cells Occurred Independently Multiple Times
The evolution of tyrosine-recombinase elements in Nematoda Amir Szitenberg1, Georgios Koutsovoulos2, Mark L Blaxter2 and David H Lunt1 1Evolutionary Biology Group, School of Biological, Biomedical & Environmental Sciences, University of Hull, Hull, HU6 7RX, UK 2Institute of Evolutionary Biology, The University of Edinburgh, EH9 3JT, UK [email protected] Abstract phylogenetically-based classification scheme. Nematode Transposable elements can be categorised into DNA and model species do not represent the diversity of RNA elements based on their mechanism of transposable elements in the phylum. transposition. Tyrosine recombinase elements (YREs) are relatively rare and poorly understood, despite Keywords: Nematoda; DIRS; PAT; transposable sharing characteristics with both DNA and RNA elements; phylogenetic classification; homoplasy; elements. Previously, the Nematoda have been reported to have a substantially different diversity of YREs compared to other animal phyla: the Dirs1-like YRE retrotransposon was encountered in most animal phyla Introduction but not in Nematoda, and a unique Pat1-like YRE retrotransposon has only been recorded from Nematoda. Transposable elements We explored the diversity of YREs in Nematoda by Transposable elements (TE) are mobile genetic elements sampling broadly across the phylum and including 34 capable of propagating within a genome and potentially genomes representing the three classes within transferring horizontally between organisms Nematoda. We developed a method to isolate and (Nakayashiki 2011). They typically constitute significant classify YREs based on both feature organization and proportions of bilaterian genomes, comprising 45% of phylogenetic relationships in an open and reproducible the human genome (Lander et al. 2001), 22% of the workflow. We also ensured that our phylogenetic Drosophila melanogaster genome (Kapitonov and Jurka approach to YRE classification identified truncated and 2003) and 12% of the Caenorhabditis elegans genome degenerate elements, informatively increasing the (Bessereau 2006). -
A Literature Review of Biological and Bio-Rational Control Strategies for Slugs: Current Research and Future Prospects
insects Review A Literature Review of Biological and Bio-Rational Control Strategies for Slugs: Current Research and Future Prospects Archita Barua 1, Christopher D. Williams 2 and Jenna L. Ross 1,3,* 1 Crop Health and Protection Limited (CHAP), York Biotech Campus, Sand Hutton, York YO41 1LZ, UK; [email protected] 2 School of Biological and Environmental Sciences, Liverpool John Moores University, Liverpool L3 3AF, UK; [email protected] 3 School of Biological Sciences, University of Aberdeen, Aberdeen AB24 3UU, UK * Correspondence: [email protected] Simple Summary: Terrestrial molluscs (slugs and snails) pose a major threat to agriculture, causing severe yield losses in a wide range of crops worldwide. The limited number of chemical molluscicides on the market, along with their negative impact on nontarget organisms and the environment, make mollusc control a real concern for growers and farmers. Therefore, the exploration of alternative, effective and eco-friendly control measures has become a dire need. This study focuses on slugs, as opposed to snails, and reviews the literature on three natural enemies of slugs, namely nematodes, carabid beetles and marsh flies, along with various natural products with slug control potential (for example, essential oils), and this study contributes to providing a comprehensive understanding of how slugs can be better controlled by using nonchemical measures. In doing so, this study also draws attention to the limitations of current research and discusses some important future research avenues in order to develop effective nonchemical slug control measures. Citation: Barua, A.; Williams, C.D.; Ross, J.L. -
Characterisation Of, and Entomopathogenic Studies On
Nematology 17 (2015) 567-580 brill.com/nemy Characterisation of, and entomopathogenic studies on, Pristionchus aerivorus (Cobb in Merrill & Ford, 1916) Chitwood, 1937 (Rhabditida: Diplogastridae) from North Carolina, USA ∗ Weimin YE 1, ,QingYU 2,NatsumiKANZAKI 3,PaulR.ADAMS 4 and Yasmin J. CARDOZA 4 1 Nematode Assay Section, Agronomic Division, North Carolina Department of Agriculture & Consumer Services, 4300 Reedy Creek Road, Raleigh, NC 27607, USA 2 Agriculture and Agri-Food Canada, Environmental Health Program/Invertebrate Biodiversity, Ottawa, ON, Canada K1A 0C6 3 Forest Pathology Laboratory, Forestry and Forest Products Research Institute, 1 Matsunosato, Tsukuba, Ibaraki 305-8687, Japan 4 Department of Entomology, North Carolina State University, Campus Box 7613, Raleigh, NC 27695-7613, USA Received: 23 December 2014; revised: 13 March 2015 Accepted for publication: 13 March 2015; available online: 25 April 2015 Summary – During a survey of entomopathogenic nematodes in North Carolina, USA, a Pristionchus species was recovered using the Galleria bait method. Morphological studies with light microscopy and scanning electron microscopy, mating tests with reference strains, as well as molecular analyses of the near-full-length small subunit rRNA gene (18S) and D2-D3 expansion segments of the large subunit rRNA gene (28S) identified this isolate as Pristionchus aerivorus. Exposed Galleria larvae were killed within 48 h and high numbers of nematodes were recovered from the cadavers about 5 days later. Preliminary tests revealed that this nematode is capable of infecting at least two other insect species (Helicoverpa zea and Tenebrio molitor) under laboratory conditions. The status of the genus Chroniodiplogaster is discussed and confirmed as a junior synonym of Pristionchus based on morphological observation and molecular phylogenetic analysis. -
Ecology of Caenorhabditis Species* §
Ecology of Caenorhabditis species* § Karin Kiontke , Department of Biology, New York University, New York, NY 10003 USA § Walter Sudhaus , Institut für Biologie/Zoologie, Freie Universität Berlin, D-14195 Berlin, Germany Table of Contents 1. Introduction ............................................................................................................................2 2. Associations with other animals .................................................................................................. 2 2.1. Necromeny ..................................................................................................................2 2.2. Phoresy .......................................................................................................................3 2.3. Possible adaptations to nematode-invertebrate associations .................................................... 3 2.4. Vertebrate associations ................................................................................................... 3 3. Ecology of Caenorhabditis species ..............................................................................................3 3.1. Ecology of C. briggsae, C. elegans and C. remanei ..............................................................4 4. Ecology of the Caenorhabditis stem species and evolution of ecological features within Caenorhabditis .. 5 4.1. The Caenorhabditis stem species ..................................................................................... 5 4.2. Evolutionary trends within Caenorhabditis