W. Chris Funk Department of Biology Colorado State University Fort Collins, Colorado 80523-1878 [email protected] EDUCATION

W. Chris Funk Department of Biology Colorado State University Fort Collins, Colorado 80523-1878 Chris.Funk@Colostate.Edu EDUCATION

W. C. Funk Curriculum Vitae 1 W. Chris Funk Department of Biology Colorado State University Fort Collins, Colorado 80523-1878 [email protected] EDUCATION

PhD University of Montana 1997–2004 Missoula, Montana Advisors: Fred W. Allendorf & Andrew L. Sheldon BA Wesleyan University 1992–1994 (Phi Beta Kappa) Middletown, Connecticut Reed College 1990–1991 Portland, Oregon

APPOINTMENTS

Assistant Professor (Vertebrate Evolutionary Ecologist), Department of Biology, Colorado State University (Aug 2008–present) Assistant Professor (Conservation Biologist), Department of Biology, College of William & Mary (Aug 2007–May 2008) Postdoctoral Research Associate (Conservation Geneticist, GS-11), USGS Forest and Rangeland Ecosystem Science Center (Jan 2006–July 2007; Advisor: Susan M. Haig) Postdoctoral Fellow (Speciation and Phylogeography), Section of Integrative Biology, University of Texas (Feb 2004–Dec 2005; Advisors: Michael J. Ryan and David C. Cannatella)

PUBLICATIONS

Publication Summary Overall, I have published 37 referred papers in a diversity of scientific journals and edited volumes. Since starting at CSU four years ago, I have published 19 papers (published or in press), including several in high impact journals such as Trends in Ecology and Evolution, Proceedings of the Royal Society B, Evolution, Molecular Ecology, Conservation Biology, Evolutionary Applications, and Biology Letters. I am lead author on 9 of these 19 papers. I also have several manuscripts in review or close to submission.

(*graduate student co-author, †undergraduate student co-author)

Refereed Journal Articles Published or In Press Fairman CM*, Bailey LL, Chambers RM, Russell TM, Funk WC (2013) Species-specific effects of acidity on pond occupancy in Ambystoma salamanders. Journal of Herpetology, in press.

W. C. Funk Curriculum Vitae 2 Trillo PA, Athanas KA*, Goldhill DH*, Hoke KL, Funk WC (2013) The influence of geographic heterogeneity in predation pressure on sexual signal divergence in an Amazonian frog species complex. Journal of Evolutionary Biology 26, 216-222. Funk WC, McKay JK, Hohenlohe PA, Allendorf FW (2012) Harnessing genomics for delineating conservation units. Trends in Ecology and Evolution 27, 489-496. Amburgey SA†, Funk WC, Murphy MA, Muths E (2012) Effects of hydroperiod duration on survival, developmental rate, and size at metamorphosis in boreal chorus frog tadpoles (Pseudacris maculata). Herpetologica 68, 456-467. Safran R, Flaxman S, Kopp M, Irwin D, Evans MR, Funk WC, Gray D, Seddon N, Scordato E, Symes L, Uy A (2012) A robust, new metric of phenotypic distance to estimate and compare multiple trait differences among populations. Current Zoology 58, 423-436. Funk WC, Caminer M†, Ron SR (2012) High levels of cryptic species diversity uncovered in Amazonian frogs. Proceedings of the Royal Society B: Biological Sciences 279, 1806–1814.  Featured by Nature in their Research Highlights section (Nature, 2011, 480:154)  Featured by the Denver Post (December 26, 2011)  Featured by the Frankfurter Neue Presse (December 9, 2011)  Featured by the Globe and Mail (December 29, 2011)  Featured on the CSU website homepage, Today @ CSU, and on YouTube  Featured on the CSU Faculty & Staff Life newsletter (January/February 2012) Phillipsen IC*, Funk WC, Hoffman E, Monsen K, Blouin M (2011) Comparative analyses of effective population size within and among species: ranid frogs as a case study. Evolution 65, 2927-2945. Funk WC, Garcia TS, Cortina GA†, Hill RH* (2011) Population genetics of introduced bullfrogs, Rana (Lithobates) catesbeianus, in the Willamette Valley, Oregon, USA. Biological Invasions 13, 651-658. Cadena CD, Cheviron ZA, Funk WC (2011) Testing the molecular and evolutionary causes of a ‘leapfrog’ pattern of geographical variation in coloration. Journal of Evolutionary Biology 24, 402-414. Funk WC, Murphy MA (2010) Testing evolutionary hypotheses for phenotypic divergence using landscape genetics. Molecular Ecology 19, 427-430. Funk WC, Forsman ED, Johnson M, Mullins TD, Haig SM (2010) Evidence for recent population bottlenecks in Northern Spotted Owls (Strix occidentalis caurina). Conservation Genetics 11, 1013-1021.  Featured by Discovery Channel News (Sohn, Emily, Discovery Channel News, June 25, 2009)  Featured by Conservation Magazine Journal Watch Online (Leber, Jessica, Conservation Magazine, June 10, 2009)  Featured by The Oregonian newspaper's OregonLive.com (Preusch, Matthew, The Oregonian, June 10, 2009)  Featured by The Seattle Times (Cornwall, Warren, The Seattle Times, August 13, 2008) Funk WC, Cannatella DC, Ryan MJ (2009) Genetic divergence is more tightly related to call variation than landscape features in the Amazonian frogs Physalaemus petersi and P. freibergi. Journal of Evolutionary Biology 22, 1839-1853.

W. C. Funk Curriculum Vitae 3 Funk WC, Cannatella DC (2009) A new, large species of Chiasmocleis Mehely 1904 (Anura: Microhylidae) from the Iquitos region, Amazonian Peru. Zootaxa 2247, 37-50. Guayasamin JM, Funk WC (2009) The amphibian community at Yanayacu Biological Station, Ecuador, with a comparison of vertical microhabitat use among Pristimantis species and the description of a new species of the Pristimantis myersi group. Zootaxa 2220, 41-66. Greene AE†, Funk WC (2009) Sexual selection on morphology in an explosive breeding amphibian, the Columbia spotted frog (Rana luteiventris). Journal of Herpetology 43, 244- 251. Funk WC, Pearl CA, Draheim HM*, Adams MJ, Mullins TD, Haig SM (2008) Range-wide phylogeographic analysis of the spotted frog complex (Rana luteiventris and Rana pretiosa) in northwestern North America. Molecular Phylogenetics and Evolution 49, 198-210. Funk WC, Angulo A, Caldwell JP, Ryan MJ, Cannatella DC (2008) Comparison of morphology and calls of two cryptic species of Physalaemus (Anura: Leiuperidae). Herpetologica 64, 290-304. Greeney HF, Gelis RA, Funk WC (2008) Predation on caecilians (Caecilia orientalis) by Barred Hawks (Leucopternis princeps) depends on rainfall. Herpetological Review 39, 162-164. Funk WC, Forsman ED, Mullins TD, Haig SM (2008) Introgression and dispersal among Spotted Owl (Strix occidentalis) subspecies. Evolutionary Applications 1, 161-171.  Featured on the cover of the inaugural issue of Evolutionary Applications. Boul KE, Funk WC (joint first author), Darst CR, Cannatella DC, Ryan MJ (2007) Sexual selection drives speciation in an Amazonian frog. Proceedings of the Royal Society B: Biological Sciences 274, 399-406.  Featured in the New York Times (Yoon, Carol Kaesuk, New York Times, February 9, 2009)  Featured by Nature in their Research Highlights section (Nature, 2006, 444:4)  Highlighted on the Proceedings of the Royal Society B web site Funk WC, Caldwell JP, Peden CE*, Padial JM, de la Riva I, Cannatella DC (2007) Tests of biogeographic hypotheses for diversification in the Amazonian forest frog, Physalaemus petersi. Molecular Phylogenetics and Evolution 44, 825-837. Funk WC, Mullins TD, Haig SM (2007) Conservation genetics of Snowy Plovers (Charadrius alexandrinus) in the Western Hemisphere: population genetic structure and delineation of subspecies. Conservation Genetics 8, 1287-1309. Funk WC, Mullins TD, Forsman ED, Haig SM (2007) Microsatellite loci for distinguishing Spotted Owls (Strix occidentalis), Barred Owls (Strix varia), and their hybrids. Molecular Ecology Notes 7, 284-286. Guayasamin JM, Bustamante MR*, Almeida-Reinoso D*, Funk WC (2006) Glass frogs (Centrolenidae) of Yanayacu Biological Station, Ecuador, with the description of a new species and comments on centrolenid systematics. Zoological Journal of the Linnean Society 147, 489-513. Funk WC, Blouin MS, Corn PS, Maxell BA, Pilliod DS, Amish S*, Allendorf FW (2005) Population structure of Columbia spotted frogs (Rana luteiventris) is strongly affected by the landscape. Molecular Ecology 14, 483-496. Funk WC, Greene AE†, Corn PS, Allendorf FW (2005) High dispersal in a frog species suggests that it is vulnerable to habitat fragmentation. Biology Letters 1, 13-16.

W. C. Funk Curriculum Vitae 4  Prominently featured at the beginning of the Dynamics of Multiple Populations chapter in L. S. Mills’ Conservation of Wildlife Populations (2007, Blackwell Publishing). Funk WC, Tyburczy JA†, Knudsen KL, Lindner KR, Allendorf FW (2005) Genetic basis of variation in morphological and life-history traits of a wild population of pink salmon. Journal of Heredity 96, 24-31.  Featured in the Quantitative Genetics chapter of F. W. Allendorf and G. Luikart’s Conservation and the Genetics of Populations (2007, Blackwell Publishing). Funk WC, Fletcher-Lazo G, Nogales-Sornosa F*, Almeida-Reinoso D* (2004) First description of a clutch and nest site for the genus Caecilia (Gymnophiona: Caeciliidae). Herpetological Review 35, 128-130. Greeney HF, Krabbe N, Lysinger M, Funk WC (2004) Observations on the breeding and vocalizations of the Fulvous-breasted Flatbill (Rhynchocyclus fulvipectus) in eastern Ecuador. Ornitologia Neotropical 15, 365-370. Funk WC, Mills LS (2003) Potential causes of population declines in forest fragments in an Amazonian frog. Biological Conservation 111, 205-214. Funk WC, Almeida-Reinoso D*, Nogales-Sornosa F*, Bustamante MR* (2003) Monitoring population trends of Eleutherodactylus frogs. Journal of Herpetology 37, 245-256. Biek R, Funk WC, Maxell BA, Mills LS (2002) What is missing in amphibian decline research: Insights from ecological sensitivity analysis. Conservation Biology 16, 728-734. Tallmon DA, Funk WC, Dunlap WW, Allendorf FW (2000) Genetic differentiation among long-toed salamander (Ambystoma macrodactylum) populations. Copeia 2000, 27-35. Funk WC, Tallmon DA, Allendorf FW (1999) Small effective population size in the long-toed salamander. Molecular Ecology 8, 1633-1640. Funk WC, Dunlap WW (1999) Colonization of high-elevation lakes by long-toed salamanders (Ambystoma macrodactylum) after the extinction of introduced trout populations. Canadian Journal of Zoology 77, 1759-1767. Danilchik MV, Funk WC, Brown EE, Larkin K (1998) Requirement for microtubules in new membrane formation during cytokinesis of Xenopus embryos. Developmental Biology 194, 47-60.

Refereed Book Chapters Matthews JH, Funk WC, Ghalambor CK (2013) Demographic approaches to assessing climate change impact: an application to pond-breeding frogs and shifting hydropatterns. In: Wildlife Conservation in a Changing Climate (eds. Brodie JF, Post E, Doak D), pp. 58-85. University of Chicago Press, Chicago.

Non-Refereed Journal Articles/Chapters Funk WC, Caminer M*, Ron SR (2012) In Amazonian frogs there is much more diversity than meets the eye. Froglog 100, 73. Lannoo M, Funk WC, Gadd M, Halliday T, Mitchell J (2007) Freshwater resources and associated terrestrial landscapes. In: Amphibian Conservation Action Plan (eds. Gascon C, Collins JP, Moore RD, et al.), pp. 16-18. IUCN/SSC Amphibian Specialist Group, Gland, Switzerland and Cambridge, UK.

W. C. Funk Curriculum Vitae 5 Angulo A, Funk WC (2006) Hyla calcarata (Rana de espolones) and Hyla fasciata (NCN). Defensive behavior. Herpetological Review 37, 203-204. Funk WC, Donnelly MA, Lips KR (2005) Alternative views of amphibian toe-clipping. Nature 433, 193-193.

GRANTS

Grants Summary While at CSU, I have actively pursued external funding from a diversity of sources to support my research program. I have been awarded a total of $3,701,523 in extramural funding, including two significant NSF grants (with funding rates of approximately 5% and 7%, respectively).

Funded Funk WC, “Conservation genomics and phylogeography of vertebrates of the California Channel Islands,” The Nature Conservancy, 2012-2014, $23,060. Funk WC, Angeloni LM, “How does gene flow affect local adaptation and population dynamics?: Experimental tests in wild populations and mesocosms,” National Science Foundation, 2012-2015, $398,775.  Featured by the Today @ Colorado State (http://www.today.colostate.edu/story.aspx?id=4659), February 4, 2013. Funk WC, Lovich RE, “Terms of endangerment: Use of modern genetic techniques to measure the status of protected species,” Department of Defense Legacy Management Program, 2012-2013, $93,577. Poff NL, Funk WC, Ghalambor CK, Kondratieff BC, Thomas S, Flecker AS, Bernardo J, Zamudio KR, “Dimensions: Collaborative Research: An integrative traits-based approach to predicting variation in vulnerability of tropical and temperate stream biodiversity to climate change,” National Science Foundation, 2011-2016, $2,999,320.  Featured by NSF (http://www.nsf.gov/news/news_summ.jsp?cntn_id=117811&org=NSF&from=news), October 5, 2010.  Featured by the Denver Business Journal (http://www.bizjournals.com/denver/stories/2010/10/11/daily4.html), October 11, 2010.  Featured by the Today @ Colorado State (http://www.today.colostate.edu/story.aspx?id=4659), October 12, 2010.  Featured by the Atlanta Business Chronicle (http://atlanta.bizjournals.com/atlanta/othercities/denver/stories/2010/10/11/daily4.html?s =industry&i=education), October 12, 2010.  Featured by the Dayton Business Journal (http://dayton.bizjournals.com/dayton/othercities/denver/stories/2010/10/11/daily4.html), October 12, 2010.  Featured by PLoS Blogs (Rosner, H., PLoS Blogs, October 3, 2011)  Featured by High Country News (Rosner, H., High Country News, February 6, 2012)  Featured by NSF (http://www.nsf.gov/discoveries/disc_summ.jsp?cntn_id=123855&WT.mc_id=USNSF_1

W. C. Funk Curriculum Vitae 6 ), April 16, 2012  Featured by Nature in their Features section (Rosner, H., Nature, 2013, 494:22-23) Funk WC, “Genetic identification of spotted frogs (Rana pretiosa complex) from British Columbia”, Keystone Wildlife Research Ltd., 2010-2011, $2000. Funk WC, “Population genetic analysis of Arkansas darter (Etheostoma cragini) in Colorado: characterization of population boundaries, landscape connectivity, effective population sizes, and bottlenecks”, Colorado Division of Wildlife, 2010-11, $42,501. Funk WC, “Genetic evaluation of the southeastern Oregon clade of Columbia spotted frogs (Rana luteiventris),” US Bureau of Land Management, 2009–14, $35,500. Funk WC, “Population genetic analysis of Oregon spotted frogs (Rana pretiosa) in the Klamath Basin: testing for recent population declines, landscape connectivity, and responses to restoration,” US Bureau of Land Management, 2009–14, $50,000. Funk WC, “Assessing the adequacy of existing reserve systems for amphibian conservation in the Colorado Front Range,” US Geological Survey, 2009–2011, $37,000. Funk WC, Adams MJ, Pearl CA, Bowerman J, “Population genetic analysis of Oregon spotted frogs (Rana pretiosa): testing for recent population declines, landscape connectivity, and responses to restoration,” Sunriver Nature Center and Oregon Community Foundation, 2009-2010, $10,000. Hoke K, Funk WC, “Integrative analysis of the genetics of speciation in Physalaemus petersi,” Colorado State University Office of International Programs–International Workshop Grant, 2009, $5000. Funk WC, “Population genetic analysis of Columbia spotted frogs (Rana luteiventris) in southwestern Idaho,” US Bureau of Land Management, 2009–11, $20,000. Funk WC, “Uncovering cryptic species of Amazonian rainforest frogs,” National Geographic Society–Waitt Grants Program, 2009, $12,850. Funk WC, “Dissecting the mechanisms driving speciation in Amazonian rainforest frogs,” Colorado State University Office of International Programs–Faculty Research Travel Grant, 2009, $2000. Funk WC, “A test of hypotheses for the invasion success of bullfrogs in the Pacific Northwest,” College of William and Mary Faculty Summer Research Grant, Summer 2008, $5000 (declined because accepted new job at Colorado State University). Haig SM, Funk WC, “Genetic evaluation of the Great Basin Distinct Population Segment in Columbia spotted frogs (Rana luteiventris),” US Fish and Wildlife Service Science Support Partnership Program, 2006–07, $20,728. Funk WC, Cole EM, Bustamante MR, “Population monitoring of terrestrial frogs, stream frogs, and caecilians at Yanayacu Biological Station, Ecuador, in Amazonian cloud forest,” Declining Amphibian Populations Task Force Seed Grant, 2006–07, $2000. Ron SR, Coloma LA, Funk WC, Collins JP, “Population monitoring, disease screening, and management of threatened amphibians of the Ecuadorian Chocó,” Declining Amphibian Populations Task Force–Critical Ecosystem Partnership Fund, 2005–06, $11,000. Funk WC, “Ecuador Amphibian Monitoring, Research, and Training Project,” Conservation, Food & Health Foundation, 2000–03, $50,885.

W. C. Funk Curriculum Vitae 7 Corn PS, Funk WC, “Role of dispersal in the persistence of populations and metapopulations of Columbia spotted frogs (Rana luteiventris),” Amphibian Research and Monitoring Initiative, US Department of the Interior, 2000–03, $30,000. Funk WC, “Assessing connectivity among populations of Columbia spotted frogs (Rana luteiventris) using capture-recapture analysis and microsatellite loci,” Declining Amphibian Populations Task Force Seed Grant, 2003, $2000. Funk WC, “Recolonization of high elevation lakes by long-toed salamanders,” Declining Amphibian Populations Task Force Seed Grant, 1998–2000, $2000. Allendorf FW, Funk WC, “Population responses of an Amazonian frog species to forest fragmentation,” National Science Foundation, 1998–99, $4,000.

In Review (PENDING) Funk, W. C., K. R. Zamudio, J. M. Guayasamin, and P. A. Hohenlohe, “Collaborative Research: The Amphibian Microbiome: Discovery, Biogeography, and Genomics of Amphibian Hosts and their Skin Bacteria and Fungi,” NSF pre-proposal, 2014- 2017.

Significant graduate student fellowships (PhD students in Funk lab) Shah AA, NSF Graduate Research Fellowship, Zoology, awarded 2011. Fitzpatrick SW, NSF Graduate Research Fellowship, Evolutionary Biology, awarded 2010. Páez MI, Fulbright Fellow, Fulbright Foreign Student Program, Ecuador, awarded 2010. Páez MI, SENESCYT (Ecuadorian NSF) Graduate Research Fellowship, awarded 2012 (covers tuition, stipend, research, and travel).

SCIENTIFIC PRESENTATIONS

Presentations Summary While at CSU, I have given 17 invited talks, 3 of which were international. My students, postdocs, and I have also presented a total of 13 contributed papers at conferences and other meetings.

Invited speaker Universities (outside CSU) Funk WC (2013) Conservation genomics of the endangered Channel Islands Fox: harnessing the power of next-generation sequencing to improve biodiversity conservation. Invited speaker for the Graduate Program in Organismic and Evolutionary Biology at the University of Massachusetts Amherst, Amherst, Massachusetts, April 26, 2013. Funk WC (2013) Predicting the effects of climate change on biodiversity: Different approaches for different scales. Invited Keynote Speaker for the Annual Program in Ecology Symposium at the University of Wyoming, Laramie, Wyoming, February 22, 2013. Funk WC (2012) Predicting the effects of climate change on biodiversity: Different approaches for different scales. Invited speaker for the Institute for Bioinformatics and Evolutionary Studies at the University of Idaho, Moscow, Idaho, June 4, 2012.

W. C. Funk Curriculum Vitae 8 Funk WC (2011) Predicting the effects of climate change on biodiversity: Different approaches for different scales. Invited speaker for the Department of Biology at Queens University, Kingston, Ontario, Canada, November 17, 2011. Funk WC (2011) Gene flow: patterns, processes, and consequences. Invited speaker at the Universidad San Francisco de Quito, Quito, Ecuador, March 17, 2011 (presented in Spanish). Funk WC (2010) Causes and consequences of mating signal divergence: speciation (or lack thereof) in Amazonian and Rocky Mountain frogs. Invited speaker for the Department of Biology at the University of Denver, Denver, Colorado, November 15, 2010. Funk WC (2010) From the Rockies to the Amazon: an integrative framework for understanding speciation mechanisms. Invited speaker for the Department of Zoology at Oklahoma State University, Stillwater, Oklahoma, April 16, 2010. Funk WC (2009) Speciation mechanisms in the Amazonian frog, Physalaemus petersi: testing the relative importance of sexual and ecological selection. Invited speaker at the Pontificia Universidad Católica del Ecuador, Quito, February 27, 2009 (presented in Spanish). Funk WC (2007) Population divergence and speciation in frogs. Invited speaker for Population Biology Seminar Series at the University of Virginia, Charlottesville, Virginia, October 17, 2007. Funk WC (2006) Patterns and function of dispersal in the population dynamics of Columbia spotted frogs: implications for maintaining viable populations. Invited speaker for the Oregon State University Department of Fisheries and Wildlife Seminar Series, Corvallis, Oregon, November 29, 2006. Funk WC (2001) Capture-recapture methods for investigating the population biology of frogs. Invited speaker for the University of Montana Math Department’s Statistics Seminar Series, Missoula, Montana, November 19, 2001.

CSU Funk WC (2012) Predicting the effects of climate change on biodiversity: Different approaches for different scales. Invited speaker for the Bioagricultural Sciences and Pest Management Departmental Seminar Series, Colorado State University, Fort Collins, Colorado, November 28, 2012. Funk WC (2012) From ten to thousands of loci: the genomics revolution comes to conservation genetics. Invited speaker for Computer Sciences course CS 680 Assembly and Analysis of Biological Sequence Data, Colorado State University, Fort Collins, Colorado, November 27, 2012. Funk WC (2009) From the Rockies to the Amazon: an integrative framework for understanding speciation mechanisms. Invited speaker for the Department of Fish, Wildlife, and Conservation Biology at Colorado State University, Ft. Collins, Colorado, April 10, 2009. Funk WC (2008) From the Rockies to the Amazon: an integrative framework for understanding speciation mechanisms. Invited speaker for the Department of Biology at Colorado State University, Ft. Collins, Colorado, February 7, 2008.

Symposia or workshops

W. C. Funk Curriculum Vitae 9 Gill BA, Kondratieff BC, Encalada AC, Poff NL, Zamudio KR, Flecker AS, Ghalambor CK, Guayasamin JM, Funk WC (2012) Do headwater stream insects follow the latitudinal diversity gradient? Invited paper presentation at the Society for Freshwater Science Annual Meeting, Louisville, Kentucky, May 20-24, 2012. Poff NL, Ghalambor CK, Bernardo J, Flecker AS, Funk WC, Kondratieff BC, Thomas S, Zamudio KR, Encalada AC, Guayasamin JM (2012) From physiological performance to ecosystem function: using species traits to integrate ecological vulnerability to climate change. Invited paper presentation at the Society for Freshwater Science Annual Meeting, Louisville, Kentucky, May 20-24, 2012. Funk WC (2010) Causes and consequences of mating signal divergence: speciation (or lack thereof) in Amazonian and Rocky Mountain frogs. Keynote speaker for the Guild of Rocky Mountain Ecologists and Evolutionary Biologists Meeting, Pingree Park, Colorado, September 10, 2010. Funk WC (2010) Mating call, female preference, and genetic variation across an elevational gradient in boreal chorus frogs. Invited speaker for the Annual Pseudacris Meetings in the Department of Biology at Florida State University, Tallahassee, Florida, August 13, 2010. Funk WC (2009) Understanding the causes of mating signal divergence and behavioral isolation in the Engystomops petersi-E. freibergi complex. Invited speaker for the International Workshop entitled the “Integrative analysis of the genetics of speciation in Engystomops petersi”, Colorado State University, October 8, 2009. Pilliod DS, Corn PS, Hossack BR, Funk WC, Hokit G, Maxell B, Munger JC, Murphy P, Wyrick A (2001) Amphibians and trout: Can wilderness areas have both? Invited paper presentation at The Wildlife Society and American Fisheries Society Oregon Chapters Annual Meeting, Portland, Oregon, February 12–13, 2001.

Government labs or agencies Funk WC, Amburgey SM (2012) Boreal chorus frogs (Pseudacris maculata): a model species for studying evolution and the effects of climate change in our own backyard. Invited speaker for the City of Fort Collins Natural Areas Department, Fort Collins, Colorado, September 26, 2012. Funk WC (2010) Causes and consequences of mating signal divergence: speciation (or lack thereof) in Amazonian and Rocky Mountain frogs. Invited speaker at the Smithsonian Conservation Biology Institute, Washington D.C., October 8, 2010. Funk WC (2010) Columbia spotted frog genetics. Invited speaker for the 5th Biennial Rangewide Columbia Spotted Frog Meeting, U.S. Fish and Wildlife Service, Reno, Nevada, March 10, 2010.

Biology stations Funk WC (2003) Amphibian species diversity and global amphibian population declines. Invited speaker for the Mindo Biological Station Guest Seminar Series, Mindo, Ecuador, January 17, 2003. Funk WC (2002) Declinaciones de anfibios en el Ecuador (Amphibian declines in Ecuador). Invited speaker for the Mindo Biological Station Guest Seminar Series, Mindo, Ecuador, March 2, 2002 (presented in Spanish).

W. C. Funk Curriculum Vitae 10

Contributed papers Billerman S, Jesmer B, Watts A, Schlichting P, Micheletti S, Bergamini R, Fortin M-J, Funk WC, Hapeman P, Muths E, Murphy MA (2013) Testing metapopulation conditions in boreal chorus frogs (Pseudacris maculata) using spatial genotypic data. Contributed paper for the 2013 Annual Symposium of the U.S. Regional Association of the International Association for Landscape Ecology (US-IALE), Austin, Texas, April 14–18, 2013. Watts A, Schlichting P, Billerman S, Jesmer B, Micheletti S, Fortin M-J, Funk WC, Hapeman P, Muths E, Murphy MA (2013) How spatio-temporal fluctuations of habitat connectivity affect amphibian genetic structure. Contributed paper for the 2013 Annual Symposium of the U.S. Regional Association of the International Association for Landscape Ecology (US-IALE), Austin, Texas, April 14–18, 2013. Amburgey SM, Murphy MA, Funk WC (2013) Predicting the effects of climate change: the role of phenotypic plasticity and predator-prey interactions in Pseudacris maculata metamorphosis. Contributed paper for the 2013 Front Range Student Ecology Symposium, Fort Collins, Colorado, February 20, 2013. Desrosiers M, Langin KM, Sillet TS, Funk WC, Ghalambor CK, Angeloni LM (2013) What makes a better Island Scrub-Jay? The fitness consequences of body size. Contributed paper for the 2013 Front Range Student Ecology Symposium, Fort Collins, Colorado, February 20, 2013. Amburgey S, Murphy MA, Funk WC (2012) Predicting the effects of climate change: phenotypic plasticity insufficient to offset high tadpole mortality in rapidly drying ponds. Contributed paper for the 2012 Meeting of Wyoming Chapter of the Wildlife Society, Laramie, Wyoming, November 14, 2012 (1st place award for presentations). Murphy M, Funk WC, Muths E (2012) Embracing climate change uncertainty: chorus frog functional connectivity in the Front Range. Contributed paper for the 2012 Meeting of Wyoming Chapter of the Wildlife Society, Laramie, Wyoming, November 14, 2012. Desrosiers M, Langin KM, Sillett TS, Funk WC, Ghalambor CK, Angeloni LM (2012) The social context of extra-pair paternity and intraspecific aggression in breeding Island Scrub- Jays. Contributed paper for the 8th California Islands Symposium, Ventura, California, October 23–26, 2012. Robertson JM, Langin KM, Sillett TS, Morrison SA, Ghalambor CK, Funk WC (2012) Identifying evolutionarily significant units and prioritizing populations for management on islands. Contributed paper for the 8th California Islands Symposium, Ventura, California, October 23–26, 2012. Langin KM, Pesendorfer MB, Sillett TS, Morrison SA, Funk WC, Ghalambor CK (2012) Habitat quality in the Island Scrub-Jay: Does acorn abundance predict body condition and survival? Contributed paper for the 8th California Islands Symposium, Ventura, California, October 23–26, 2012. Langin KM, Sillett TS, Funk WC, Morrison SA, Ghalambor CK (2012) Divergence with gene flow: local adaptation in bill morphology within a single-island endemic, the Island Scrub- Jay. Contributed paper for the North American Ornithological Conference, Vancouver, British Columbia, Canada, August 15–18, 2012.

W. C. Funk Curriculum Vitae 11 Funk WC, McKay JK, Hohenlohe PA, Allendorf FW (2012) Harnessing genomics for delineating conservation units. Contributed paper for the 1st Joint Congress on Evolutionary Biology, Ottawa, Ontario, Canada, July 6–10, 2012. Langin KM, Sillett TS, Funk WC, Morrison SA, Ghalambor CK (2012) Landscape genetic structure in a bird species endemic to a single island: divergence with gene flow? Contributed paper for the 1st Joint Congress on Evolutionary Biology, Ottawa, Ontario, Canada, July 6– 10, 2012. Fitzpatrick SW, Angeloni LM, Broder D, Ghalambor CK, Torres-Dowdall J, Handelsmann C, Ruell E, Funk WC (2012) Testing the effects of gene flow on traits, fitness, and population dynamics in Trinidadian guppies. Contributed paper for the 1st Joint Congress on Evolutionary Biology, Ottawa, Ontario, Canada, July 6–10, 2012. Robertson JM, Páez-Vacas M, Murphy MA, Pearl CA, Adams MJ, Haig SM, Funk WC (2012) Mountains, deserts, and frogs: striking regional variation in landscape effects on gene flow. Contributed paper for the 1st Joint Congress on Evolutionary Biology, Ottawa, Ontario, Canada, July 6–10, 2012. Swanson J, Bailey LL, Funk WC, Muths E (2012) Factors influencing survival and mark retention in post-metamorphic boreal chorus frogs. Contributed paper for the Front Range Ecology Symposium, Fort Collins, Colorado, February 21-22, 2012 (1st place award for undergraduate oral presentation). Amburgey SA, Funk WC, Murphy MA, Muths E, Bailey LL (2012) Predicting the effects of climate change on Pseudacris maculata. Contributed paper for the Front Range Ecology Symposium, Fort Collins, Colorado, February 21-22, 2012. Murphy M, Funk WC, Muths E (2012) Applications of molecular tools for rangeland ecology and management. Contributed paper for the Society for Range Management, Spokane, Washing, February 2012. Ron SR, Funk WC, Caminer M, Venegas P (2011) Vasta diversidad críptica entre anuros amazónicos revelada por análisis de sistemática integrada. Contributed paper presentation at the IX Congresso Latinoamericano de Herpetologia, Curitiba, Brazil, July 17–22, 2011. Langin KM, Sillett TS, Funk WC, Morrison SA, Ghalambor CK (2011) Morphological and genetic divergence in the Island Scrub-Jay: local adaptation within a single-island endemic? Contributed paper presentation at the Cooper Ornithological Society Annual Meeting, Kearny, Nebraska, March 9-13, 2011. Hill RH, Garcia TS, Funk WC (2008) Mechanisms behind the successful invasion of bullfrogs (Rana catesbeiana) in the Northwest United States. Contributed paper presentation at the Association of State Wetland Managers and Society of Wetland Scientists Joint Conference. Portland, Oregon, September 18, 2008. Funk WC (2006) Why is genetic variation reduced in high elevation populations of Columbia spotted frogs?: A test of competing hypotheses. Contributed paper presentation at the Society of Northwestern Vertebrate Biology Annual Meeting, Olympia, Washington, March 27–April 1, 2006. Funk WC, Cannatella DC, Ryan MJ, Boul KE (2005) Phylogeography and call variation in an Amazonian frog. Contributed paper presentation at the Evolution Annual Meeting, Fairbanks, Alaska, June 10–14, 2005.

W. C. Funk Curriculum Vitae 12 Bustamante MR, Funk WC, Coloma LA, Ron SR, Merino-Viteri A (2003) Monitoreo a largo plazo de la comunidad de anfibios del Bosque Protector Cashca Totoras, Provincia Bolívar, Ecuador (Long-term monitoring of the amphibian community at the Cashca Totoras Protected Forest, Bolívar Province, Ecuador). Contributed paper presentation at the VI Congreso Latinoamericano de Herpetología, Lima, Peru, January 20–23, 2003. Biek R, Funk WC (speaker), Maxell BA, Mills LS (2000) Amphibian declines and sensitivity analysis: Identifying key life history stages. Contributed paper presentation at the Society for Conservation Biology Annual Meeting, Missoula, Montana, June 9–12, 2000.

Posters Gannon D, Gill B, Funk WC, Kondratieff BC, Poff NL (2013) Utilizing DNA barcoding to evaluate richness of Rocky Mountain Chloroperlidae (Plecoptera) and the power of adult collection for predicting in-stream species compositions. Front Range Student Ecology Symposium, Fort Collins, Colorado, February 20, 2013. Desrosiers M, Langin K, Sillett TS, Funk WC, Ghalambor C, Angeloni LM (2012) The social context of extra-pair paternity and intraspecific aggression in breeding Island Scrub-Jays. NAOC meeting, Vancouver, British Columbia, August 14-18, 2012. Fitzpatrick SW, Torres-Dowdall J, Handelsman C, Broder ED, Lopez-Sepulcre A, Angeloni LM, Ghalambor C, Funk WC (2010) What’s below the barrier? Testing the effects of gene flow on local adaptation in native low predation populations downstream from the introductions. FIBR meeting, Ithaca, New York, November 4–6, 2010. Angeloni L, Broder ED, Fitzpatrick SW, Funk WC, Handelsman CA, Torres-Dowdall J, Ghalambor CK (2009) Evolution and phenotypic plasticity of guppy behavior: mating strategies and aggression. FIBR meeting, Tuscon, Arizona. Fitzpatrick SW, Funk WC, Angeloni LM, Broder ED, Ghalambor CK, Handelsman CA, Torres- Dowdall J (2009) Gene flow, selection, and local adaptation dynamics tested in the wild. FIBR meeting, Tucson, Arizona.

HONORS, SCHOLARSHIPS, AND FELLOWSHIPS

USGS Star Award in recognition of outstanding performance on Snowy Plover conservation genetics project, Forest and Rangeland Ecosystem Science Center, 2006, $1500. NSF Graduate Research Fellowship, University of Montana, 1997–2000, $140,500. NSF Graduate Research Traineeship, Training Within Environmental Biology Program, University of Montana, 1997–2002, $142,550. Awarded four Bertha Morton Scholarships for graduate student excellence in academics, research, and community achievements, University of Montana, 1999, 2000, 2002, and 2003, $8000. Awarded a Clancy Gordon Environmental Scholarship for applying scientific knowledge towards the resolution of environmental problems, University of Montana, 2000, $1700. Elected to Phi Beta Kappa, Wesleyan University, 1994. NSF Undergraduate Research Fellowship, Scripps Institute of Oceanography, La Jolla, California, 1993.

W. C. Funk Curriculum Vitae 13

TEACHING AND ADVISING EXPERIENCE

Taught Molecular Ecology (upper-level undergraduate and graduate course), Colorado State University, Fall 2012. Co-taught Molecular Ecology (upper-level undergraduate and graduate course) with Amy Angert, Colorado State University, Spring 2009, Fall 2010. Co-taught Evolutionary Biology Seminar (graduate course) focusing on quantitative genetics with Kim Hoke, Colorado State University, Fall 2010. Co-taught Landscape Genetics (graduate course) with Melanie Murphy, Colorado State University, Spring 2010. Taught Tropical Ecology and Evolution, Colorado State University, Fall 2009, Fall 2010, Fall 2011. Co-taught Biology of Organisms (freshman biology course) with Joe von Fischer, Colorado State University, Spring 2010, Spring 2012. Co-taught Evolutionary Biology Seminar (graduate course) focusing on the interaction between gene flow and selection with John McKay and Amy Angert, Colorado State University, Fall 2008. Taught Evolutionary Ecology of Climate Change (graduate and advanced undergraduate course), College of William and Mary, Spring 2008. Designed and presented Population Genetic Analysis Module for Genetics and Demography of Small Populations (graduate course), Oregon State University, Fall 2006. Presented guest lectures for Genetics and Demography of Small Populations (graduate course), Oregon State University, Fall 2006. Presented several guest lectures for Conservation Genetics (undergraduate course), Advanced Population Genetics (graduate course), and Conservation of Wildlife Populations (undergraduate course), University of Montana, 1999–2003. Co-taught Population Genetics Seminar (joint undergraduate/graduate course) focusing on the interaction between gene flow and local adaptation with Fred Allendorf, University of Montana, Spring 2003. Designed group research project, presented lectures, and led field data collection for Ecology & Conservation of Aquatic Vertebrates (undergraduate course), University of Montana, Summer 2002. Teaching Assistant for Freshwater Ecology (undergraduate course), University of Montana, Spring 2003. Teaching Assistant for Conservation Genetics (undergraduate course), University of Montana, Fall 1998. Teaching Assistant for Principles of Biology III: Physiology, Ecology and Evolution (undergraduate course), Wesleyan University, Fall 1993. Volunteer Instructor for an after-school class for second and third grade students on the Natural History and Conservation of Amphibians as part of the Missoula Flagship Prevention Program for At-Risk Youth, Missoula, Montana, Spring 2003. Advised 25 graduate students, 33 undergraduate students, and two postdoctoral fellows at the University of Montana, Universidad Católica del Ecuador, University of Texas,

W. C. Funk Curriculum Vitae 14 Universidad Nacional Mayor de San Marcos (Peru), Oregon State University, College of William and Mary, and Colorado State University. Ten of these students have earned co- authorship on my papers. I am also strongly committed to advising students from groups historically underrepresented in the sciences, as demonstrated by my track record of mentoring one Native American, 14 Latinos, and 38 women. Two of my students have been awarded NSF Graduate Research Fellowships and another received a Fulbright Fellowship. The two the postdoctoral fellows I mentored (both women) have successfully acquired tenure-track jobs.

CONSERVATION LEADERSHIP AND COMMUNICATION EXPERIENCE

Advising managers and policy makers Invited to brief the Washington Department of Wildlife on strategies for re-introduction of captive-bred Oregon spotted frogs, September 10, 2012. Invited to brief the Bureau of Land Management, U.S. Geological Survey, U.S. Forest Service, and state wildlife agency biologists and managers on our Oregon spotted frog genetics results, Portland, Oregon, June 11, 2012. Invited to brief the Bureau of Land Management, U.S. Geological Survey, U.S. Forest Service, and state wildlife agency biologists and managers on our Columbia spotted frog genetics results, Portland, Oregon, May 30, 2012. Invited to advise the IUCN (International Union for the Conservation of Nature) Red List on the ecology and status of Chiasmocleis devriesi, a new frog species my colleague and I described in 2009 from Amazonian Peru, January 19, 2011. Invited to advise the Colorado Division of Wildlife Biologists (Kevin Rogers and Harry Crocket) regarding conservation genetics of cutthroat trout and Arkansas darters, January 27, 2010. Invited to brief the Columbia spotted frog Idaho Technical Team on our Columbia spotted frog genetics results, Boise, Idaho, August 12, 2008. Invited to brief an interagency team of federal biologists and managers on our Columbia spotted frog genetics results, Reno, Nevada, Jul 24, 2008. Invited to brief the US Geological Survey, US Fish and Wildlife Service, and US Department of Interior administrators on our genetic results pertaining to the conservation and management of Northern Spotted Owls, Fall 2007.

Panels Invited to serve on panel at the 8th California Islands Symposium session on “Islands of Change: Planning for collaborative research and management of the California Islands,” Ventura, California, October 25, 2012. Invited to serve on a Species and Conservation Panel for the School of Global Environmental Sustainability at Avogadro’s Number, Fort Collins, Colorado, on September 5, 2010. Invited to present research on climate change effects on amphibians to the director of Climate Refugees (Michael Nash), the Chair of the Board of Governors for the CSU System (Patrick McConathy), and the President of CSU (Tony Frank), November 15, 2009. Invited to serve as a Panelist for International Colloquium on Global Challenges for Sustainability held at Colorado State University, September 10, 2009.

W. C. Funk Curriculum Vitae 15

Committees and workshops Invited to serve on the Science Review Committee for the Northern Spotted Owl Recovery Plan, March 2009–present. Invited to serve on the Landscape Change Committee as part of the development of an Amphibian Conservation Action Plan at the Amphibian Conservation Summit, Washington, DC, September 2005. Invited to participate in the Advanced Training in Amphibian Population Decline Research Workshop funded by the National Science Foundation and the Research and Analysis Network for Neotropical Amphibians (RANA), San Jose, Costa Rica, January 2004. Invited to serve as a Committee Member of RANA: The Research and Analysis Network for Neotropical Amphibians, 2003–2007. Founding member of the Yanayacu Natural History Research Group, 2002–present. Research Associate and Advisory Board Member for Yanayacu Biological Station, Cosanga, Ecuador, 2000–present (www.yanayacu.org). Invited to NSF-sponsored Workshop on Declining Amphibians in Latin America, Quito, Ecuador, November 1999.

Interviews Was interviewed by freelance journalist, Hilary Rosner, regarding our research on the vulnerability of stream organisms to climate change for an article in PLoS BLOGS, September 28, 2011. Was interviewed by Nature magazine reporter Gayathri Vaidyanathan regarding our Northern Spotted Owl genetics results, February 25, 2011.

Reports and letters Wrote letter to US Forest Service in support of a plan to restore Oregon spotted frog (Rana luteiventris) habitat in the Klamath Basin of southern Oregon, March 13, 2011. Co-authored report and letter opposing construction of a road by the Petrobras oil company into Yasuní National Park, Ecuador, with 50 other international scientists and conservationists, November 2004. Wrote report for the US Forest Service Cabinet Ranger District on the distribution of and management recommendations for amphibians and reptiles found along Marten Creek, Montana, Summer 2002. Commented on the US Fish and Wildlife Service’s Draft Revised Recovery Plan for the Santa Cruz Long-toed Salamander, September 1999. Submitted recommendations to Montana Fish, Wildlife and Parks on management of long-toed salamanders in high-elevation lakes in the Bitterroot Mountains, Montana, April 1999.

PROFESSIONAL SERVICE

Journal peer reviews

W. C. Funk Curriculum Vitae 16 Reviewer for the following journals: Alytes, American Naturalist, Animal Behaviour, Biological Conservation, Biology Letters, Biotropica, Conservation Biology, Conservation Genetics, Conservation Genetics Resources, Ecography, Ecology, Ecology Letters, Evolutionary Applications, Heredity, Herpetologica, Herpetological Journal, Herpetological Review, Journal of Biogeography, Journal of Heredity, Journal of Herpetology, Journal of Wildlife Management, Molecular Ecology, Molecular Ecology Resources, Molecular Phylogenetics and Evolution, Mycologia, Northwestern Naturalist, PLoS ONE, PNAS, Proceedings of the Royal Society B: Biological Sciences, Trends in Ecology and Evolution

Book peer reviews Reviewer for the following book publishers: Springer, University of Chicago Press

NSF panelist NSF Dimensions of Biodiversity panelist, June 27-29, 2012. NSF Doctoral Dissertation Improvement Grant panelist, February 2010.

Funding agency ad hoc reviews Reviewer for the following foundations and government agencies: National Science Foundation, National Geographic Society, Canada Foundation for Innovation, US Geological Survey

University committees Plant Evolutionary Biologist Search Committee, September 2012–present. CSU Department of Biology Executive Committee, August 2011–present. School of Global Environmental Sustainability (SoGES) Excecutive Council, August 2012– present. Faculty advisor for CSU Student Herpetology Society, February 2011–present. Alliance for Graduate Education & Professoriate (AGEP; an organization advancing graduate student diversity) Faculty member, Colorado State University, September 2010–present. Graduate Degree Program in Ecology (GDPE) Executive Committee member, Colorado State University, August 2010–May 2012. Graduate student representative on the Aquatic Ecologist Search Committee, University of Montana, Spring 2003. Graduate student representative on the Student Evaluation Committee to assess the teaching performance of faculty in the Division of Biological Sciences, University of Montana, Fall 2002.

Other community and public outreach Helped with guppy kit outreach in a 7th grade biology class at Severance Middle School, Winsor, CO, April 24, 2012. Led natural history field trip to Lory State Park for 2nd grade students from Laurel Elementary School, May 25, 2010. Volunteered at Putnam Science Fair to teach elementary students about genetic variation within species and evolution, March 6, 2010.

W. C. Funk Curriculum Vitae 17 Poudre River aquatic insect survey for Laurel Elementary School second grade class, October 23, 2009. Was interviewed by Seattle Times reporter Warren Cornwall regarding our northern spotted owl genetics results, August 8, 2008. Volunteer Instructor for an after-school class for second and third grade students on the natural history and conservation of amphibians as part of the Missoula Flagship prevention program for at-risk youth, Spring 2003.

Other international service External examiner for MSc thesis at Dalhousie University, Nova Scotia, Canada, August 2012.

PROFESSIONAL MEMBERSHIPS

Society for Conservation Biology, Society for Society for the Study of Evolution, Ecological Society of America, American Association for the Advancement of Science, American Society of Ichthyologists and Herpetologists, Society for the Study of Amphibians and Reptiles

FOREIGN LANGUAGES

Spanish: read, write, and speak fluently. Portuguese: read.