Bungarotoxin, a Pre-Synaptic Toxin with Enzymatic Activity (Neurotoxin/Phospholipase A2/Synaptic Transmission) PETER N

Total Page:16

File Type:pdf, Size:1020Kb

Bungarotoxin, a Pre-Synaptic Toxin with Enzymatic Activity (Neurotoxin/Phospholipase A2/Synaptic Transmission) PETER N Proc. Nat. Acad. Sci. USA Vol. 78, No. 1, pp. 178-182, January 1976 Cell Biology #-Bungarotoxin, a pre-synaptic toxin with enzymatic activity (neurotoxin/phospholipase A2/synaptic transmission) PETER N. STRONG*, JON GOERKEtt, STEPHEN G. OBERG*, AND REGIS B. KELLY*t Departments of * Biochemistry and Biophysics, t Physiology, and the t Cardiovascular Research Institute, University of California, San Francisco, San Francisco, Caoif. 94143 Communicated by Donald Kennedy, October 30, 1975 ABSTRACT ,5-Bungarotoxin, a pre-synaptic neurotoxin naja afid Vipera russelli. Additionally, we observe that ,B- isolated from the venom of the snake Bungarus multicinctus, bungarotoxin can modify synaptic transmission only when has been shown to modify release of neurotransmitter at the have neuromuscular junction. In this communication, we demon- the ionic requirements of the phospholipase activity strate that jP-bungarotoxin is a potent phospholipase A2 (phos- been met. Since we find that other phospholipases at equiva- phatide 2-acyl hydrolase, EC 3.1.1.4), comparable in activity lent concentrations are not toxic, we propose that the phos- with purified phospholipase enzymes from Naja naja and Vi- pholipase activity is a necessary but perhaps not sufficient pera russeii. The phospholipase activity of fl-bungarotoxin facet of fl-bungarotoxin's mode of action. We suggest that requires calcium and is stimulated by deoxycholate. When the phospholipase acts preferentially on pre-synaptic neuro- strontium replaces calcium no phospholipase activity is de- tected. Since neuromuscufar transmission is not blocked nal membranes to modify release of transmitter by altering when calcium is re laced by strontium, it was possible to ex- the probability of fusion of transmitter-containing vesicles amine the effects of the toxin on neuromuscular transmission with the nerve terminal membrane. in the presence of strontium. Under these conditions, when the phospholipase activity should be inhibited, the toxin has little or no effect on neuromuscular transmission. If fl-bun- MATERIALS AND METHODS garotoxin owes its toxicity in part to its enzymatic activity, then it must be placed in a different class from those toxins Reagents. venom from the snake Bungarus multi- which produce their effect by binding passively to an appro- Crude priate receptor. cinctus was obtained from the Ross Allen Reptile Institute, Silver Springs, Fla. Purified phospholipase A enzymes from The release of packaged secretions in response to a sudden Naja naja and Vipera russellhi were the gifts of Dr. J. Sa- demand occurs in many diverse cells (e.g., hormones in en- lach (Veterans Administration Hospital, San Francisco). Soy- docrine glands, digestive enzymes in exocrine glands, and bean phosphatidylcholine (SoyPC) was a gift of Dr. H. Eik- neurotransmitters at nerve endings). It has been suggested ermann (Nattermann and Co., Cologne). Saturated egg that such processes occur by exocytosis-fusion of the mem- phosphatidylcholine (SEPC) was prepared by the catalytic brane of the secretory granule with the cell membrane (1). hydrogenation of purified egg phosphatidylcholine. l-Acyl- The similar calcium requirements of neural and nonneural 2-[3H]acyl-sn-glycero-3-phosphorylcholine ([3H]SEPC), ob- secretory systems (2) have strengthened the idea that many tained by catalytic tritiation of egg phosphatidylcholine, was secretory processes are the same at the molecular level. a gift of Dr. R. Mason (University of California, San Francis- However, the molecular basis for any release system is un- co). known. Purification of ft-Bungarotoxin (Molecular Weight The most well-understood secretory process is probably 21,800). The toxin was purified as previously described (9, the release of acetylcholine at the neuromuscular junction, 13). The purity of i0-bungarotoxin was analyzed by sodium thanks to quantitative electrophysiological measurements dodecyl sulfate polyacrylamide gel electrophoresis (9), iso- (3). Even so, electrophysiology by itself cannot test the mo- electric focusing techniques using broad range (pH 3-10) lecular models that it proposes. In recent years, the discov- Ampholynes (9, 14), and phosphocellulose (Whatman P-li) ery of highly specific neurotoxins which interfere with the ion-exchange chromatography [12 X 0.7 cm diameter 0.3- release of transmitter from nerve terminals [e.g., botulinum 0.7 M potassium phosphate gradient, pH 6.2, modified from toxin (4, 5), black widow spider venom (6, 7), 0-bungarotox- the procedure of Cooper and Reich (15)]. Purified fl-bungar- in (8-10), and notexin (11, 12)] has provided us with poten- otoxin was stored frozen in distilled water or Tris-HCl buff- tially valuable tools for elucidation of the molecular basis of er, pH 7.6 at -20°. The toxin retains full neurotoxicity and neurotransmitter release via biochemical technology. phospholipase activity for many months after repeated In this paper we examine some of the biochemical and freeze-thaw cycles. electrophysiological properties of one such neurotoxin, ,B- Phospholipase A Assay. Purified ,B-bungarotoxin was de- bungarotoxin, which has been shown by electrophysiological salted by overnight dialysis (40, distilled water) prior to measurements to act on the pre-synaptic terminal and to assaying for phospholipase activity. Phospholipase activities have no post-synaptic effects (8, 9). We find that f3-bungaro- were determined using a pH-stat essentially according to toxin is a powerful calcium-dependent phospholipase A2 published procedures (16, 17). As is found for pancreatic (phosphatide 2-acyl-hydrolase, EC 3.1.1.4), comparable in phospholipase A2, activity was greatly enhanced by the pres- activity to purified phospholipase A enzymes from Naja ence of the emulsifying agent sodium deoxycholate (17). For optimal activities, equimolar concentrations of deoxycho- Abbreviations: SoyPC, soybean phosphatidylcholine; SEPC, saturat- late and phosphatidylcholine were required. Substrate [0.2 ed egg phosphatidylcholine; [3H]SEPC, 1-acyl-2-[3H]acyl-sn-glyc- ml of SoyPC in ethanol, 8 ,umol, containing less than 2% lyso ero-3-phosphorylcholine; TLC, thin-layer chromatography; products as determined by thin-layer chromatography m.e.p.p., miniature endplate potential. (TLC)] was added under a constant stream of nitrogen to 4 178 Downloaded by guest on October 2, 2021 Cell Biology: Strong et al. Proc. Nat. Acad. Sci. USA 73(1976) 179 O 0 I z >04 0 0 (A >r m LU -) o C14 m_ Q m < .15 z ::I .10O .05 FRACTION NUMBER 0 5 10 15 20 25 30 FIG. 1. CM-cellulose ion-exchange chromatography of fl-bun- garotoxin. Toxic peak fractions from a CM-Sephadex ion-exchange [,/3 -BUNGAROTOXIN] ,nM column (9) were concentrated and desalted using an Amicon UM-2 filter and then applied to a CM-cellulose column (Whatman CM- FIG. 2. Determination of phospholipase activity of fl-bungaro- 32, 25 cm X 1.6 cm diameter), previously equilibrated with 0.05 M toxin using a pH-stat technique. Dialyzed toxin was added to an NH4OAc (pH 5.0). The column was eluted with a 200 ml linear salt incubation mixture consisting of 8 gtmol of phosphatidylcholine gradient, 0.3 M NH4OAc (pH 5.5) to 0.7 M NH4OAc (pH 6.5) and and 7.5 gmol of sodium deoxycholate in 4 ml of a salt medium (10 2.0 ml fractions were collected. Fractions absorbing at 280 nm were mM CaCl2, 100 mM NaCl, 0.05 mM EDTA). Fatty acid liberated dialyzed against distilled water and the phospholipase activity was in the presence of toxin was titrated to pH 8 (370) with 4 mM measured as described (Fig. 2). All chromatographic procedures NaOH, using an autotitrator. Linear kinetics were observed during and dialysis operations were carried out at 40. the first 5 min after toxin addition and from the initial slope, phos- pholipase activity was computed, expressed as ,ueq of fatty acid liberated per min. ml of a salt reaction mixture (100 mM NaCl, 10 mM CaC12, 0.05 mM EDTA) at 370 in the assay chamber (18). Typically lose column and eluted with a linear NH4OAc salt gradient, 15 ,umol of sodium deoxycholate was introduced and the re- two protein peaks were resolved (Fig. 1). The minor protein action was started by addition of toxin (<3 Mg) in unbuf- component (11%), eluted after the bulk of the material, was fered distilled water. Fatty acid liberated in the incubation less than 2.5% as toxic as the major component, whose mini- cell was titrated with 4 mM NaOH to pH 8.0 (Radiometer mum lethal dose was 0.01 ,g/g of mouse. The peak of phos- model TTT-11 Autotitrator). The rates of SoyPC hydrolysis pholipase activity coincided with the major component; were linear for at least the initial 5 min and it was within from an estimate of the detection limits of our assay, the spe- this time period that reaction rates were computed. Activity cific activity of the minor component must be less than is expressed as the liberation of fatty acid in ,eq/min. Spe- 0.05% of the major component. cific activity is given by the number of ueq of fatty acid lib- In order to be sure that the phospholipase activity of ,3- erated per min/mg of protein. Duplicate assays were repro- bungarotoxin was not due to a contaminant which coelutes ducible within 5%. with the toxin, we had to demonstrate the purity of our sam- Thin-Layer Chromatography. Aliquots from the incubat- ple of ,B-bungarotoxin. The major component of The CM-cel- ed assay mixture were extracted according to the method of lulose column was homogeneous as evidenced by sodium do- Bligh and Dyer (19) and subjected to TLC using solvent sys- decyl sulfate-polyacrylamide gel electrophoresis in the ab- tems previously described (20). Reaction products were sence of reducing agents. In the presence of 2% 2-mercapto- identified after exposure to iodine vapor or under UV light ethanol, two bands were observed (9); these correspond to after spraying with an aqueous solution of 8-anilino-1-naph- the two subunits held together in the native toxin by disul- thalene sulfonic acid (2.5 mg/ml).
Recommended publications
  • Role of Amylase in Ovarian Cancer Mai Mohamed University of South Florida, [email protected]
    University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School July 2017 Role of Amylase in Ovarian Cancer Mai Mohamed University of South Florida, [email protected] Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the Pathology Commons Scholar Commons Citation Mohamed, Mai, "Role of Amylase in Ovarian Cancer" (2017). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/6907 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Role of Amylase in Ovarian Cancer by Mai Mohamed A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Pathology and Cell Biology Morsani College of Medicine University of South Florida Major Professor: Patricia Kruk, Ph.D. Paula C. Bickford, Ph.D. Meera Nanjundan, Ph.D. Marzenna Wiranowska, Ph.D. Lauri Wright, Ph.D. Date of Approval: June 29, 2017 Keywords: ovarian cancer, amylase, computational analyses, glycocalyx, cellular invasion Copyright © 2017, Mai Mohamed Dedication This dissertation is dedicated to my parents, Ahmed and Fatma, who have always stressed the importance of education, and, throughout my education, have been my strongest source of encouragement and support. They always believed in me and I am eternally grateful to them. I would also like to thank my brothers, Mohamed and Hussien, and my sister, Mariam. I would also like to thank my husband, Ahmed.
    [Show full text]
  • The Metabolic Serine Hydrolases and Their Functions in Mammalian Physiology and Disease Jonathan Z
    REVIEW pubs.acs.org/CR The Metabolic Serine Hydrolases and Their Functions in Mammalian Physiology and Disease Jonathan Z. Long* and Benjamin F. Cravatt* The Skaggs Institute for Chemical Biology and Department of Chemical Physiology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States CONTENTS 2.4. Other Phospholipases 6034 1. Introduction 6023 2.4.1. LIPG (Endothelial Lipase) 6034 2. Small-Molecule Hydrolases 6023 2.4.2. PLA1A (Phosphatidylserine-Specific 2.1. Intracellular Neutral Lipases 6023 PLA1) 6035 2.1.1. LIPE (Hormone-Sensitive Lipase) 6024 2.4.3. LIPH and LIPI (Phosphatidic Acid-Specific 2.1.2. PNPLA2 (Adipose Triglyceride Lipase) 6024 PLA1R and β) 6035 2.1.3. MGLL (Monoacylglycerol Lipase) 6025 2.4.4. PLB1 (Phospholipase B) 6035 2.1.4. DAGLA and DAGLB (Diacylglycerol Lipase 2.4.5. DDHD1 and DDHD2 (DDHD Domain R and β) 6026 Containing 1 and 2) 6035 2.1.5. CES3 (Carboxylesterase 3) 6026 2.4.6. ABHD4 (Alpha/Beta Hydrolase Domain 2.1.6. AADACL1 (Arylacetamide Deacetylase-like 1) 6026 Containing 4) 6036 2.1.7. ABHD6 (Alpha/Beta Hydrolase Domain 2.5. Small-Molecule Amidases 6036 Containing 6) 6027 2.5.1. FAAH and FAAH2 (Fatty Acid Amide 2.1.8. ABHD12 (Alpha/Beta Hydrolase Domain Hydrolase and FAAH2) 6036 Containing 12) 6027 2.5.2. AFMID (Arylformamidase) 6037 2.2. Extracellular Neutral Lipases 6027 2.6. Acyl-CoA Hydrolases 6037 2.2.1. PNLIP (Pancreatic Lipase) 6028 2.6.1. FASN (Fatty Acid Synthase) 6037 2.2.2. PNLIPRP1 and PNLIPR2 (Pancreatic 2.6.2.
    [Show full text]
  • Insect Venom Phospholipases A1 and A2 Roles in the Envenoming Process and Allergy
    Insect Biochemistry and Molecular Biology 105 (2019) 10–24 Contents lists available at ScienceDirect Insect Biochemistry and Molecular Biology journal homepage: www.elsevier.com/locate/ibmb Insect venom phospholipases A1 and A2: Roles in the envenoming process and allergy T Amilcar Perez-Riverola, Alexis Musacchio Lasab, José Roberto Aparecido dos Santos-Pintoa, ∗ Mario Sergio Palmaa, a Center of the Study of Social Insects, Department of Biology, Institute of Biosciences of Rio Claro, São Paulo State University (UNESP), Rio Claro, SP, 13500, Brazil b Center for Genetic Engineering and Biotechnology, Biomedical Research Division, Department of System Biology, Ave. 31, e/158 and 190, P.O. Box 6162, Cubanacan, Playa, Havana, 10600, Cuba ARTICLE INFO ABSTRACT Keywords: Insect venom phospholipases have been identified in nearly all clinically relevant social Hymenoptera, including Hymenoptera bees, wasps and ants. Among other biological roles, during the envenoming process these enzymes cause the Venom phospholipases A1 and A2 disruption of cellular membranes and induce hypersensitive reactions, including life threatening anaphylaxis. ff Toxic e ects While phospholipase A2 (PLA2) is a predominant component of bee venoms, phospholipase A1 (PLA1) is highly Hypersensitive reactions abundant in wasps and ants. The pronounced prevalence of IgE-mediated reactivity to these allergens in sen- Allergy diagnosis sitized patients emphasizes their important role as major elicitors of Hymenoptera venom allergy (HVA). PLA1 and -A2 represent valuable marker allergens for differentiation of genuine sensitizations to bee and/or wasp venoms from cross-reactivity. Moreover, in massive attacks, insect venom phospholipases often cause several pathologies that can lead to fatalities. This review summarizes the available data related to structure, model of enzymatic activity and pathophysiological roles during envenoming process of insect venom phospholipases A1 and -A2.
    [Show full text]
  • Lipid Metabolism Assays
    Lipid Metabolism Assay Kit Research for Dyslipidemia and Arteriosclerosis - Research Use Only - ELISA 【Sample Type : Human】 Application Product Measurement Serum EDTA- EDTA- Heparin - Super- Product Name Code Range Plasma Plasma Plasma natant (Postheparin) 27180 Human Serum HTGL Assay Kit - IBL 0.08 ~ 5 ng/mL ○ ○ ○ - - 27179 Human GPIHBP1 Assay Kit - IBL 7.8~500 pg/mL ○ ○ - - - 27182 Human EL Full-Length Assay Kit - IBL 31.25 ~ 2000 pg/mL ○ ○ ○ - ○ 27263 Human EL C-Terminal Assay Kit - IBL 0.13 ~ 8 ng/mL ○ ○ ○ - - 27191 Human ApoA5 Assay Kit - IBL 0.31 ~ 20ng/mL ○ ○ - - - 27181 Human ApoB-100 Assay Kit - IBL 0.13 ~ 8.4 μg/mL ○ ○ - - ○ 27745 Human ANGPTL2 Assay Kit - IBL 0.05 ~ 3.5 ng/mL ○ ○ - - ○ 27750 Human ANGPTL3 (h.s) Assay Kit - IBL 0.47 ~ 30 ng/mL ○ ○ - - ○ 27749 Human ANGPTL4 Assay Kit - IBL 23.44 ~ 1500 pg/mL ○ ○ - - - 27795 Human ANGPTL8 Assay kit - IBL 0.61 ~ 80 pmol/L ○ ○ - - ○ Others 【Sample Type : Human】 Application Product Measurement Product Name Serum EDTA- EDTA- Heparin Super- Code Range Plasma Plasma -Plasma natant (Postheparin) 27185 LPL /HTGL Activity Assay Kit - IBL HTGL :135 ~ 431 U/L - - ○ - - 27264 LPL /HTGL Activity Control Plus Kit - IBL LPL : 30 ~ 153 U/L - - ○ - - Postheparin : Blood samples are collected after administration of the intravenous injection of heparin. Immuno-Biological Laboratories Co., Ltd. Lipid Metabolism Assay Kit Research for Dyslipidemia and Arteriosclerosis - Research Use Only - HTGL (hepatic triacylglycerol lipase) has an important role in lipoprotein metabolism as a lipolytic enzyme that hydrolyzes triglycerides (TG) and phospholipids in chylomicron remnants, intermediate-density lipoproteins (IDL) and high-density lipoproteins (HDL).
    [Show full text]
  • Phospholipases in Bacterial Virulence and Pathogenesis
    Review Article Adv Biotech & Micro Volume 10 Issue 5 - September 2018 Copyright © All rights are reserved by Kaur Jagdeep DOI: 10.19080/AIBM.2018.10.555798 Phospholipases in Bacterial Virulence and Pathogenesis Kumari Bandana, Kaur Jashandeep and Kaur Jagdeep* Department of Biotechnology, Panjab University, India Submission: June14, 2018; Published: September 04, 2018 *Corresponding author: Jagdeep Kaur, Professor, Department of Biotechnology, BMS Block-1, South Campus, Panjab University, Chandigarh 160014, India, Tel: (o)0172-2534085, Fax: + 91-172-2541409; Email; Abstract Phospholipases are ubiquitous hydrolases that catalyze the hydrolysis of phospholipids, a key component of eukaryotic cellular membranes. The metabolites generated after hydrolysis functions as secondary messengers that are further involved in signal transduction, membrane number of ways like host cell invasion, modulating the phospholipid content of their membrane, and so on. Also, these enzymes are crucial for the pathogenesistrafficking, cell of proliferation,certain bacteria etc. because These enzymesof their role are in considered escape from as the an hostimportant defence virulence mechanism. factors, This as review they help is focused the bacterial on different pathogens diversity in of PLs and their role in pathogenesis and virulence in bacterial infection. Keywords: Phospholipase; Virulence; Pathogenesis; Host cell invasion; Lipid droplet; Phosphatidylcholine; Drug target Abbreviations: PLA: Phospholipase A; PLB: Phospholipases B; PLD: Phospholipase D; SAM: Sterile Alfa Motif; SG: Src Homology; PMN: Polymorphonuclear Cells Introduction Infectious diseases are caused by bacteria, fungi, viruses, Phospholipids and phospholipases or parasites. These may be communicable, acquired from Phospholipids are the key component of cellular membrane contaminated food or water, or may spread by insect bites, etc.
    [Show full text]
  • The Role of Phosphatidylinositol-Specific Phospholipase-C in Plant Defense Signaling
    The Role of Phosphatidylinositol-Specific Phospholipase-C in Plant Defense Signaling Ahmed M. Abd-El-Haliem Thesis committee Promotor Prof. Dr P.J.G.M. de Wit Professor of Phytopathology Wageningen University Co-promotor Dr M.H.A.J. Joosten Associate professor, Laboratory of Phytopathology Wageningen University Other members Prof. Dr H.J. Bouwmeester, Wageningen University Prof. Dr M.W. Prins, University of Amsterdam Prof. Dr G.C. Angenent, Wageningen University Dr S.H.E.J. Gabriёls, Monsanto Holland BV, Wageningen This research was conducted under the auspices of the Graduate School of Experimental Plant Sciences. The Role of Phosphatidylinositol-Specific Phospholipase-C in Plant Defense Signaling Ahmed M. Abd-El-Haliem Thesis submitted in fulfilment of the requirements for the degree of doctor at Wageningen University by the authority of the Rector Magnificus Prof. Dr M.J. Kropff, in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Thursday 23 October 2014 at 11.00 a.m. in the Aula. Ahmed M. Abd-El-Haliem The Role of Phosphatidylinositol-Specific Phospholipase-C in Plant Defense Signaling, 188 pages. PhD thesis, Wageningen University, Wageningen, NL (2014) With references, with summaries in Dutch and English ISBN 978-94-6257-118-1 TABLE OF CONTENTS CHAPTER 1 General Introduction & Thesis Outline 7 CHAPTER 2 Identification of Tomato Phosphatidylinositol-Specific 19 Phospholipase-C (PI-PLC) Family Members and the Role of PLC4 and PLC6 in HR and Disease Resistance CHAPTER 3 Defense Activation
    [Show full text]
  • Phospholipase a 1 Enzymes Have a History of Safe Use in Food
    GRAS Notice (GRN) No. 651 http://www.fda.gov/Food/IngredientsPackagingLabeling/GRAS/NoticeInventory/default.htm ORIGINAL SUBMISSION 000001 Qrrl novozymes~J Rethi nk Tomorrow GRN OOObSi May 2, 2016 GRAS Notification Program Office of Food Additive Safety (HFS-200) Center for Food Safety and Applied Nutrition US Food And Drug Administration 5100 Paint Branch Parkway College Park, MD 20740-3835 Dear Sir or Madam, We are hereby submitting one paper copy and one eCopy, a generally recognized as safe (GRAS) notification, in accordance with proposed 21 C.F.R. § 170.36 (a), for Novozymes' phospholipase A1 enzyme preparation produced by a genetically modified strain of Aspergillus niger. The electronic copy is provided on a virus-free CD, and is an exact copy of the paper submission . Novozymes has determined through scientific procedures that the phospholipase A 1 is generally recognized as safe for use in the food industry as a processing aid for the de-gumming of oil. Please contact me by direct telephone at 919 494-3187, direct fax at 919 494-3420 or email at [email protected] if you have any questions or require additional information. Sincerely, (b) (6) Janet Oesterling ~~~~~G~~tQ) Regulatory Affairs Specialist Ill MAY 1 3 2016 Enclosures OFFICE OF FOOD ADDITIVE SAFEn' J Novozymes No rth Ame ri ca, In c. Regula tory Affairs 77 Pe rry Cha pe l C hurch Road , P.O . Box 576 Franklinton, North Carolin a 27525 Te/:919-494-3000 Fax: 919-494-3420 www.novozymes.com 000002 novozymes~~ ­ Rethink Tomorrow May 2 , 2016 RE: GRAS Notification - Exemption Claim Dear Sir or Madam: Pursuant to the proposed 21C.F.R.§ 170.36 (c)(1) Novozymes North America Inc.
    [Show full text]
  • Gfapind Nestin G FA P DA PI
    Figure S1 GFAPInd NB +bFGF/+EGF NB -bFGF/-EGF nestin GFAP DAPI (a) Figure S1 GFAPConst NB +bFGF+/+EGF NB -bFGF/-EGF nestin GFAP DAPI (b) Figure S2 +bFGF/+EGF (a) Figure S2 -bFGF/-EGF (b) Figure S3 #10 #1095 #1051 #1063 #1043 #1083 ~20 weeks GSCs GSC_IRs compare tumor-propagating capacity proliferation gene expression Supplemental Table S1. Expression patterns of nestin and GFAP in GSCs self-renewing in vitro. GSC line nestin (%) GFAP (%) #10 90 ± 1,9 26 ± 5,8 #1095 92 ± 5,4 1,45 ± 0,1 #1063 74,4 ± 27,9 3,14 ± 1,8 #1051 92 ± 1,3 < 1 #1043 96,7 ± 1,4 96,7 ± 1,4 #1080 99 ± 0,6 99 ± 0,6 #1083 64,5 ± 14,1 64,5 ± 14,1 G112-NB 99 ± 1,6 99 ± 1,6 Immunofluorescence staining of GSCs cultured under self-renewal promoting condition Supplemental Table S2. Gene expression analysis by Gene Ontology terms.
    [Show full text]
  • (12) United States Patent (10) Patent No.: US 6,924,130 B1 Barenholz Et Al
    USOO69241.3OB1 (12) United States Patent (10) Patent No.: US 6,924,130 B1 Barenholz et al. (45) Date of Patent: Aug. 2, 2005 (54) ENZYMATIC TRANSESTERIFICATION OR Rakhimov et al., “Properties of Phospholipase D From HYDROLYSIS OF PHOSPHOLIPIDS IN Raphanus-Sativus”, Biochemistry, (English translation of AQUEOUS MEDIA Biokhimiya) vol. 46, No. 2 Part 1, pp. 197-204 (1981). XP 002151651: Abstract for JP 63 036791: “Production of (75) Inventors: Yechezkel Barenholz, Jerusalem (IL); Phospholipids Whose Base . , Nippon Oils & Fats Co Shimon Amselem, Rehovot (IL) Ltd, (1988), Database WPI, week 8813, Derwent Publica tions Ltd., London. (73) Assignee: Yissum Research Development Allgyer et al., “Phospholipase D from Savoy Cabbage: Company of the Hebrew University of Purification and Preliminary Kinetic Characterization', Bio Jerusalem, Jerusalem (IL) chemistry, vol. 18, No. 2, pp. 5348–5353 (1979). Bartlett, “Phosphorus Assay in Column Chromatography', (*) Notice: Subject to any disclaimer, the term of this J. Biol. Chem., vol. 234, No. 3, pp. 466-471 (1959). patent is extended or adjusted under 35 Bligh et al., “A Rapid Method of Total Lipid Extraction and U.S.C. 154(b) by 25 days. Purification’, Canadian Journal of Biochemistry and Physi (21) Appl. No.: 10/009.771 ology, vol. 37, No. 8, pp. 911–917 (1959). Servi, “Phospholipases as Synthetic Catalysts”, Topics in (22) PCT Filed: Jun. 15, 2000 Current Chemistry, vol. 200, pp. 127-158 (1999). (86) PCT No.: PCT/IL00/00350 Amselem et al., “In Vitro Tests to Predict In Vivo Perfor mance of Liposomal Dosage Forms”, Chemistry and Phys S371 (c)(1), ics of Lipids, vol.
    [Show full text]
  • Supplemental Figures 04 12 2017
    Jung et al. 1 SUPPLEMENTAL FIGURES 2 3 Supplemental Figure 1. Clinical relevance of natural product methyltransferases (NPMTs) in brain disorders. (A) 4 Table summarizing characteristics of 11 NPMTs using data derived from the TCGA GBM and Rembrandt datasets for 5 relative expression levels and survival. In addition, published studies of the 11 NPMTs are summarized. (B) The 1 Jung et al. 6 expression levels of 10 NPMTs in glioblastoma versus non‐tumor brain are displayed in a heatmap, ranked by 7 significance and expression levels. *, p<0.05; **, p<0.01; ***, p<0.001. 8 2 Jung et al. 9 10 Supplemental Figure 2. Anatomical distribution of methyltransferase and metabolic signatures within 11 glioblastomas. The Ivy GAP dataset was downloaded and interrogated by histological structure for NNMT, NAMPT, 12 DNMT mRNA expression and selected gene expression signatures. The results are displayed on a heatmap. The 13 sample size of each histological region as indicated on the figure. 14 3 Jung et al. 15 16 Supplemental Figure 3. Altered expression of nicotinamide and nicotinate metabolism‐related enzymes in 17 glioblastoma. (A) Heatmap (fold change of expression) of whole 25 enzymes in the KEGG nicotinate and 18 nicotinamide metabolism gene set were analyzed in indicated glioblastoma expression datasets with Oncomine. 4 Jung et al. 19 Color bar intensity indicates percentile of fold change in glioblastoma relative to normal brain. (B) Nicotinamide and 20 nicotinate and methionine salvage pathways are displayed with the relative expression levels in glioblastoma 21 specimens in the TCGA GBM dataset indicated. 22 5 Jung et al. 23 24 Supplementary Figure 4.
    [Show full text]
  • (12) Patent Application Publication (10) Pub. No.: US 2012/0266329 A1 Mathur Et Al
    US 2012026.6329A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2012/0266329 A1 Mathur et al. (43) Pub. Date: Oct. 18, 2012 (54) NUCLEICACIDS AND PROTEINS AND CI2N 9/10 (2006.01) METHODS FOR MAKING AND USING THEMI CI2N 9/24 (2006.01) CI2N 9/02 (2006.01) (75) Inventors: Eric J. Mathur, Carlsbad, CA CI2N 9/06 (2006.01) (US); Cathy Chang, San Marcos, CI2P 2L/02 (2006.01) CA (US) CI2O I/04 (2006.01) CI2N 9/96 (2006.01) (73) Assignee: BP Corporation North America CI2N 5/82 (2006.01) Inc., Houston, TX (US) CI2N 15/53 (2006.01) CI2N IS/54 (2006.01) CI2N 15/57 2006.O1 (22) Filed: Feb. 20, 2012 CI2N IS/60 308: Related U.S. Application Data EN f :08: (62) Division of application No. 1 1/817,403, filed on May AOIH 5/00 (2006.01) 7, 2008, now Pat. No. 8,119,385, filed as application AOIH 5/10 (2006.01) No. PCT/US2006/007642 on Mar. 3, 2006. C07K I4/00 (2006.01) CI2N IS/II (2006.01) (60) Provisional application No. 60/658,984, filed on Mar. AOIH I/06 (2006.01) 4, 2005. CI2N 15/63 (2006.01) Publication Classification (52) U.S. Cl. ................... 800/293; 435/320.1; 435/252.3: 435/325; 435/254.11: 435/254.2:435/348; (51) Int. Cl. 435/419; 435/195; 435/196; 435/198: 435/233; CI2N 15/52 (2006.01) 435/201:435/232; 435/208; 435/227; 435/193; CI2N 15/85 (2006.01) 435/200; 435/189: 435/191: 435/69.1; 435/34; CI2N 5/86 (2006.01) 435/188:536/23.2; 435/468; 800/298; 800/320; CI2N 15/867 (2006.01) 800/317.2: 800/317.4: 800/320.3: 800/306; CI2N 5/864 (2006.01) 800/312 800/320.2: 800/317.3; 800/322; CI2N 5/8 (2006.01) 800/320.1; 530/350, 536/23.1: 800/278; 800/294 CI2N I/2 (2006.01) CI2N 5/10 (2006.01) (57) ABSTRACT CI2N L/15 (2006.01) CI2N I/19 (2006.01) The invention provides polypeptides, including enzymes, CI2N 9/14 (2006.01) structural proteins and binding proteins, polynucleotides CI2N 9/16 (2006.01) encoding these polypeptides, and methods of making and CI2N 9/20 (2006.01) using these polynucleotides and polypeptides.
    [Show full text]
  • Subfamily of Enzymes Emily B
    Mardian et al. Journal of Biomedical Science (2015) 22:99 DOI 10.1186/s12929-015-0210-7 REVIEW Open Access The HRASLS (PLA/AT) subfamily of enzymes Emily B. Mardian1, Ryan M. Bradley1 and Robin E. Duncan2* Abstract The H-RAS-like suppressor (HRASLS) subfamily consists of five enzymes (1–5) in humans and three (1, 3, and 5) in mice and rats that share sequence homology with lecithin:retinol acyltransferase (LRAT). All HRASLS family members possess in vitro phospholipid metabolizing abilities including phospholipase A1/2 (PLA1/2) activities and O-acyltransferase activities for the remodeling of glycerophospholipid acyl chains, as well as N-acyltransferase activities for the production of N-acylphosphatidylethanolamines. The in vivo biological activities of the HRASLS enzymes have not yet been fully investigated. Research to date indicates involvement of this subfamily in a wide array of biological processes and, as a consequence, these five enzymes have undergone extensive rediscovery and renaming within different fields of research. This review briefly describes the discovery of each of the HRASLS enzymes and their role in cancer, and discusses the biochemical function of each enzyme, as well as the biological role, if known. Gaps in current understanding are highlighted and suggestions for future research directions are discussed. Keywords: H-RAS-like suppressor enzymes, Acyltransferase, Phospholipase A1/2, Class II tumour suppressor, N-acylphosphatidylethanolamine (NAPE), Pla2g16, TIG3, RARRES3, RIG1, iNAT Introduction and asparagine residues, forming an unconventional The H-RAS-like suppressor (HRASLS) enzymes consist catalytic triad that is characteristic of NlpC/P60 fam- of five members (1–5) in humans and three (1, 3, and 5) ily members [4].
    [Show full text]