The History of Elm Breeding L
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Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
On the Species Status of the Root-Knot Nematode Meloidogyne Ulmi Palmisano & Ambrogioni, 2000 (Nematoda: Meloidogynidae)
GHENT UNIVERSITY FACULTY OF SCIENCE DEPARTMENT OF BIOLOGY ACADEMIC YEAR 2012-2013 On the Species Status of the Root-Knot Nematode Meloidogyne ulmi Palmisano & Ambrogioni, 2000 (Nematoda: Meloidogynidae) AHMED MOHAMMED European Master of Science in Nematology (EUMAINE) PROMOTER: PROF. DR. GERRIT KARSSEN Thesis submitted in partial fulfilment of the degree of PLANT PROTECTION SERVICE European Master of Science WAGENINGEN in Nematology On the species status of the root–knot nematode Meloidogyne ulmi Palmisano and Ambrogioni, 2000 (Nematoda: Meloidogynidae) Mohammed AHMED 1, 2, * 1Ghent University, Department of Biology, Ledeganckstraat 35, 9000 Ghent, Belgium 2 Plant Protection Service, P.O. Box 9102, 6700 HC Wageningen, The Netherlands *Corresponding author, e–mail: [email protected] M. Ahmed Summary The root–knot nematode Meloidogyne ulmi is synonymised with Meloidogyne mali based on morphological and morphometric similarities, common hosts, as well as biochemical similarities at both protein and DNA levels. M. mali was first described in Japan on Malus prunifolia Borkh.; and M. ulmi in Italy on Ulmus chenmoui Cheng. Morphological and morphometric studies of their holo- and paratypes revealed some important similarities in certain characters as well as some general variability in some others. Host test also showed that besides the two species being able to parasitize the type hosts of the other, they share some other common hosts. Our study of the esterase and malate dehydrogenase isozyme phenotypes of some M. ulmi population gave a perfectly comparable result to that already known for M. mali. Finally, phylogenetic study of their SSU and LSU rDNA sequence data revealed that the two are not distinguishable at DNA level. -
Molecular Phylogeny, Detection and Epidemiology of Nectria Galligena Bres
Molecular Phylogeny, Detection and Epidemiology of Nectria galligena Bres. the incitant of Nectria Canker on Apple By Stephen Richard Henry Langrell April, 2000 Department of Biological Sciences Wye College, University of London Wye, Ashford, Kent. TN25 5AH A thesis submitted in partial fulfillment of the requirements governing the award of the degree of Doctor of Philosophy of the University of London (2) Abstract Nectria canker, incited by Nectria galligena (anamorph Cylindrocarpon heteronema), is prevalent in apple and pear orchards in all temperate growing areas of the world where it causes loss of yield by direct damage to trees, and rotting in stored fruit. Interpretation of the conventional epidemiology, from which current control measures are designed, is often inconsistent with the distribution of infections, particularly in young orchards, and may account for poor control in some areas, suggesting many original assumptions concerning pathogen biology and spread require revision. Earlier work has implicated nurseries as a source of infection. This thesis describes experiments designed to test this hypothesis and the development and application of molecular tools to examine intra- specific variation in N. galligena and its detection in woody tissue. Two experimental trials based on randomised block designs were undertaken. In the first, trees comprising cv. Queen Cox on M9 rootstocks from five UK and five continental commercial nurseries were planted at a single site in East Kent. The incidence of Nectria canker over the ensuing five years was monitored. Significant differences in percentage of trees with canker between nurseries were observed, indicating a source effect. Analysis of data from a second experiment, comprising M9 rootstocks from three nurseries, budded with cv. -
(Hypocreales) Proposed for Acceptance Or Rejection
IMA FUNGUS · VOLUME 4 · no 1: 41–51 doi:10.5598/imafungus.2013.04.01.05 Genera in Bionectriaceae, Hypocreaceae, and Nectriaceae (Hypocreales) ARTICLE proposed for acceptance or rejection Amy Y. Rossman1, Keith A. Seifert2, Gary J. Samuels3, Andrew M. Minnis4, Hans-Josef Schroers5, Lorenzo Lombard6, Pedro W. Crous6, Kadri Põldmaa7, Paul F. Cannon8, Richard C. Summerbell9, David M. Geiser10, Wen-ying Zhuang11, Yuuri Hirooka12, Cesar Herrera13, Catalina Salgado-Salazar13, and Priscila Chaverri13 1Systematic Mycology & Microbiology Laboratory, USDA-ARS, Beltsville, Maryland 20705, USA; corresponding author e-mail: Amy.Rossman@ ars.usda.gov 2Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture & Agri-Food Canada, Ottawa, ON K1A 0C6, Canada 3321 Hedgehog Mt. Rd., Deering, NH 03244, USA 4Center for Forest Mycology Research, Northern Research Station, USDA-U.S. Forest Service, One Gifford Pincheot Dr., Madison, WI 53726, USA 5Agricultural Institute of Slovenia, Hacquetova 17, 1000 Ljubljana, Slovenia 6CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 7Institute of Ecology and Earth Sciences and Natural History Museum, University of Tartu, Vanemuise 46, 51014 Tartu, Estonia 8Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK 9Sporometrics, Inc., 219 Dufferin Street, Suite 20C, Toronto, Ontario, Canada M6K 1Y9 10Department of Plant Pathology and Environmental Microbiology, 121 Buckhout Laboratory, The Pennsylvania State University, University Park, PA 16802 USA 11State -
Checklists of the Myxomycetes, Larger Ascomycetes, and Larger
Posted online: january 2009 “This internet site was updated on January 2011” Summary published in MYCOTAXON 106: 65-68. Sesli, E. and Denchev, CM. (2008). Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey. Mycotaxon 106: 65–67 + online version [2011]: 1-136 (http://www.mycotaxon.com/resources/checklists/sesli-v106-checklist.pdf) Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey 1 2 Ertuğrul Sesli & Cvetomir M. Denchev 1 Department of Biology Education, Karadeniz Technical University, Trabzon, Turkey (e-mail: [email protected]) 2 Institute of Botany, Bulgarian Academy of Sciences, 23 Acad. G. Bonchev St., 1113 Sofia, Bulgaria (e-mail: [email protected]) Corresponding author: [email protected] Sesli & Denchev – Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey 2 Abstract This paper attempts to compile available data on myxomycetes, larger ascomycetes, and larger basidiomycetes reported from or known to occur in Turkey, obtained from 428 publications issued between 1915 and January, 2011. Three main lists of correct names of myxomycetes, larger ascomycetes, and larger basidiomycetes, recognized as occurring in Turkey, are given, in which the taxa are alphabetically arranged. The total number of correct names of species, recognized as occurring in Turkey and presented in the checklists, is 2196, including 222 myxomycetes, 152 ascomycetes, and 1822 basidiomycetes. For each taxon, references are cited. An index of synonyms based on literature records from Turkey is appended. The index includes 890 species and infraspecific taxa. A list of excluded records of 80 species, providing reasons for their exclusion, is also given. -
2 Cromwell Bottom Fungi List
CROMWELL BOTTOM FUNGI LIST Compiled By Charlie Streets Check out the British Mycological Society website - click to go https://www.britmycolsoc.org.uk BOLETES Brown Birch Bolete (Leccinum scabrum) Peppery Bolete (Chalciporus piperatus) EARTHBALLS Common Earthball (Scleroderma citrinum) PAXILLACEAE Brown Rollrim (Paxillus involutus) RUSSULAS AND MILKCAPS Variable Brittlegill (Russula versicolor) Coconut Milkcap (Lactarius glyciosmus) Ugly Milkcap (Lactaria turpis) Woolly Milkcap (Lactarius torminosus) STEREACEAE Hairy Curtain Crust (Stereum hirsutum) AGARICACEAE Shaggy Inkcap (Coprinus comatus) AMANITAS Fly Agaric (Amanita muscaria) TRICHOLOMAS Birch Knight (Tricholoma fulvum) Clouded Funnel (Clitocybe nebularis) Clustered Toughshank (Collybia confluens) TRICHOLOMAS (?) Crimped Gill (Plicatura crispa) MARASMIACEAE Twig Parachute (Marasmiellus ramealis) CORTINARIACEAE Marsh Webcap (Cortinarias uliginosus) INOCYBACEAE Scurfy Twiglet (Tubaria furfuracea) BOLBITIACEAE Yellow Fieldcap (Bolbitius titubans) STROPHARIACEAE Sulphur Tuft (Hypholoma fasciculare) PSATHYRELLACEAE Weeping Widow (Lacrymaria lacrymabunda) Glistening Inkcap (Coprinus micaseus) LENTINACEAE Oyster Mushroom (Pleurotis ostreatus) PUFFBALLS Common Puffball (Lycoperdon perlatum) CLAVULINACEAE Wrinkled Club (Clavulina rugosa) POLYPORACEAE Blackfoot Polypore (Polyporus leptocephalus) CORIOLACEAE Birch Polypore (Piptoporus betulinus) Blushing Bracket (Daedaleopsis confragosa) Turkeytail (Trametes versicolor) Oak Mazegill (Daedalea quercina) MERULIACEAE Silverleaf Fungus (Chondrostereum -
Fungi of the Iowa Loess Hills
Proceedings of the Iowa Academy of Science Volume 92 Number Article 7 1985 Fungi of the Iowa Loess Hills L. H. Tiffany Iowa State University J. F. Shearer Iowa State University A. W. Gabel Iowa State University G. Knaphus Iowa State University Let us know how access to this document benefits ouy Copyright © Copyright 1985 by the Iowa Academy of Science Follow this and additional works at: https://scholarworks.uni.edu/pias Recommended Citation Tiffany, L. H.; Shearer, J. F.; Gabel, A. W.; and Knaphus, G. (1985) "Fungi of the Iowa Loess Hills," Proceedings of the Iowa Academy of Science, 92(5), 180-185. Available at: https://scholarworks.uni.edu/pias/vol92/iss5/7 This Research is brought to you for free and open access by the Iowa Academy of Science at UNI ScholarWorks. It has been accepted for inclusion in Proceedings of the Iowa Academy of Science by an authorized editor of UNI ScholarWorks. For more information, please contact [email protected]. Tiffany et al.: Fungi of the Iowa Loess Hills Proc. Iowa Acad. Sci. 92(5):180-185, 1985 Fungi of the Iowa Loess Hills L. H. TIFFANY,). F. SHEARER, A. W. GABEL, and G. KNAPHUS Department of Botany, Iowa State University, Ames, IA 50011 From 1981 through 1983 biological surveys of the Loess Hills were spoonsored by the Iowa State Preserves Advisory Board. Twenty-four sites in 7 counties were visited during the first week in June during these years. Collections were made of all macrofungi producing identifiable fruiting structures or represented by recognizable weathered fruiting structures developed the previous fall. -
Savoryellales (Hypocreomycetidae, Sordariomycetes): a Novel Lineage
Mycologia, 103(6), 2011, pp. 1351–1371. DOI: 10.3852/11-102 # 2011 by The Mycological Society of America, Lawrence, KS 66044-8897 Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella Nattawut Boonyuen1 Canalisporium) formed a new lineage that has Mycology Laboratory (BMYC), Bioresources Technology invaded both marine and freshwater habitats, indi- Unit (BTU), National Center for Genetic Engineering cating that these genera share a common ancestor and Biotechnology (BIOTEC), 113 Thailand Science and are closely related. Because they show no clear Park, Phaholyothin Road, Khlong 1, Khlong Luang, Pathumthani 12120, Thailand, and Department of relationship with any named order we erect a new Plant Pathology, Faculty of Agriculture, Kasetsart order Savoryellales in the subclass Hypocreomyceti- University, 50 Phaholyothin Road, Chatuchak, dae, Sordariomycetes. The genera Savoryella and Bangkok 10900, Thailand Ascothailandia are monophyletic, while the position Charuwan Chuaseeharonnachai of Ascotaiwania is unresolved. All three genera are Satinee Suetrong phylogenetically related and form a distinct clade Veera Sri-indrasutdhi similar to the unclassified group of marine ascomy- Somsak Sivichai cetes comprising the genera Swampomyces, Torpedos- E.B. Gareth Jones pora and Juncigera (TBM clade: Torpedospora/Bertia/ Mycology Laboratory (BMYC), Bioresources Technology Melanospora) in the Hypocreomycetidae incertae -
Hypocreales, Sordariomycetes) from Decaying Palm Leaves in Thailand
Mycosphere Baipadisphaeria gen. nov., a freshwater ascomycete (Hypocreales, Sordariomycetes) from decaying palm leaves in Thailand Pinruan U1, Rungjindamai N2, Sakayaroj J2, Lumyong S1, Hyde KD3 and Jones EBG2* 1Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand 2BIOTEC Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology, NSTDA, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand Pinruan U, Rungjindamai N, Sakayaroj J, Lumyong S, Hyde KD, Jones EBG 2010 – Baipadisphaeria gen. nov., a freshwater ascomycete (Hypocreales, Sordariomycetes) from decaying palm leaves in Thailand. Mycosphere 1, 53–63. Baipadisphaeria spathulospora gen. et sp. nov., a freshwater ascomycete is characterized by black immersed ascomata, unbranched, septate paraphyses, unitunicate, clavate to ovoid asci, lacking an apical structure, and fusiform to almost cylindrical, straight or curved, hyaline to pale brown, unicellular, and smooth-walled ascospores. No anamorph was observed. The species is described from submerged decaying leaves of the peat swamp palm Licuala longicalycata. Phylogenetic analyses based on combined small and large subunit ribosomal DNA sequences showed that it belongs in Nectriaceae (Hypocreales, Hypocreomycetidae, Ascomycota). Baipadisphaeria spathulospora constitutes a sister taxon with weak support to Leuconectria clusiae in all analyses. Based -
Genome Size Variation in Elms (Ulmus Spp.)
HORTSCIENCE 52(4):547–553. 2017. doi: 10.21273/HORTSCI11432-16 Johnson, 1979; Oginuma et al., 1990). Poly- ploidy is rare, and it is known from only two species. U. americana is known to include Genome Size Variation in Elms (Ulmus tetraploids with 2n = 56 (Karrfalt and Karnosky, 1975) as well as diploids (Whittemore and spp.) and Related Genera Olsen, 2011), and Hemiptelea davidii has two 1 reported chromosome numbers, 2n =56(Fu Alan T. Whittemore et al., 1998) and 2n = 84 (Oginuma et al., 1990), U.S. National Arboretum, 3501 New York Avenue NE, Washington, DC presumably tetraploid and hexaploid numbers 20002-1958 based on x = 14. Elms in North America and Europe have Zheng-Lian Xia suffered high mortality from two diseases: U.S. National Arboretum, Room 124, Building 010A, BARC-West, 10300 DED, caused by several species of fungi Baltimore Avenue, Beltsville, MD 20705 native to East Asia (Brasier, 1991, 2001), and elm yellows (elm phloem necrosis), Additional index words. DNA content, elm, flow cytometry, Hemiptelea, Planera, Ulmus, caused by a phytoplasma (Mittempergher, Zelkova 2000; Sinclair, 2000). Because of the horti- cultural importance of elms, there has been Abstract. Elms (Ulmus spp.) are iconic street and landscape trees, but their use is much interest in selection and breeding for currently limited by susceptibility to disease, especially Dutch elm disease (DED). disease tolerance in the genus (Dunn, 2000). Improved access to disease-resistant germplasm will be of great benefit for ongoing To date, elm breeding has mostly in- breeding and selection programs, but these programs have been limited historically by volved species native to Europe and North uncertain relationships among Ulmus species, especially the North American species America, although the fungi that cause DED and their putative Old World relatives. -
Beech Bark Disease in Slovakia Related to Fungi of the Genus Nectria S.L
FOLIA OECOLOGICA – vol. 47, no. 1 (2020), doi: 10.2478/foecol-2020-0003 Beech bark disease in Slovakia related to fungi of the genus Nectria s.l. and the anatomy of necrotised bark and wood: a brief review Vladimír Račko1*, Ivan Mihál2, Oľga Mišíková1 1Department of Wood Science, Faculty of Wood Science and Technology, Technical University Zvolen, T. G. Masaryka 24, 960 53 Zvolen, Slovak Republic 2 Institute of Forest Ecology of the Slovak Academy of Sciences, Sturova 2, 960 53 Zvolen, Slovak Republic Abstract Račko, V., Mihál, I., Mišíková, O., 2020. Beech bark disease in Slovakia related to fungi of the genus Nectria s.l. and the anatomy of necrotised bark and wood: a brief review. Folia Oecologica, 47 (1): 16–22. This short review summarises the history and current knowledge regarding beech bark disease (BBD) in Slovakia. Moreover, the results of ongoing long-term disease monitoring are summarised. The article also provides a list of the 29 Nectria s.l. species found to date in Slovakia, complete with information about their occurrence on host tree species. Above all, we highlight the need for histopathological research on beech tissues attacked by differentNectria spp. Notably, neither the defensive response mechanisms of host cellular tissues at the anatomical and biochemical levels nor the strategy of decomposition by different pathogens have been explored in beech. Keywords beech necrosis, Fagus sylvatica L., histopathology, Nectria s.l., xylem tissues Introduction BBD infection wave (Cale et al., 2015a, b; Steiner et al., 2017). The causality of the rise and induction of necro- At present, a number of phytopathological signs that are ses as an external symptom of beech bark necrotic disease largely caused by various fungi have been recorded in has been discussed ever since research on this issue began all developmental stages of Fagus sylvatica L. -
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Toreign Diseases of Forest Trees of the World U.S. D-T. pf,,„,ç^^,^^ AGRICULTURE HANDBOOK NO. 197 U.S. DEPARTMENT OF AGRICULTURE Foreign Diseases of Forest Trees of the World An Annotated List by Parley Spaulding, formerly forest pathologis Northeastern Forest Experiment Station Forest Service Agriculture Handbook No. 197 August 1961 U.S. DEPAftTÄffiNT OF AGRICULTURE ACKNOWLEDGMENTS Two publications have been indispensable to the author in prepar- ing this handbook. John A. Stevenson's "Foreign Plant Diseases" (U.S. Dept. Agr. unnumbered publication, 198 pp., 1926) has served as a reliable guide. Information on the occurrence of tree diseases in the United States has been obtained from the "Index of Plant Dis- eases in the United States" by Freeman Weiss and Muriel J. O'Brien (U.S. Dept. Agr. Plant Dis. Survey Spec. Pub. 1, Parts I-V, 1263 pp., 1950-53). The author wishes to express liis appreciation to Dean George A. Garratt for providing free access to the library of the School of Forestry, Yale University. The Latin names and authorities for the trees were verified by Elbert L. Little, Jr., who also checked the common names and, where possible, supplied additional ones. His invaluable assistance is grate- fully acknowledged. To Bertha Mohr special thanks are due for her assistance, enabling the author to complete a task so arduous that no one else has attempted it. For sale by the Superintendent of Documents, iTs. Government Printing Ofläee- Washington 25, D.C. — Price $1.00 *^ CONTENTS Page Introduction 1 The diseases 2 Viruses 3 Bacteria 7 Fungi 13 Host index of the diseases 279 Foreign diseases potentially most dangerous to North American forests__ 357 m Foreign Diseases of Forest Trees of the World INTRODUCTION Diseases of forest trees may be denned briefly as abnormal physi- ology caused by four types of factors, singly or in combination: (1) Nonliving, usually referred to as nonparasitic or site factor; (2) ani- mals, including insects and nematodes; (3) plants; and (4) viruses.