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Spongiforma, a New Genus of Gasteroid Boletes from Thailand
Fungal Diversity Spongiforma, a new genus of gasteroid boletes from Thailand Desjardin, D.E.1*, Binder, M.2, Roekring, S.3 and Flegel, T.4 1Department of Biology, San Francisco State University, 1600 Holloway Ave., San Francisco, CA 94132 2Department of Biology, Clark University, 950 Main St., Worcester, MA 01601 3Asia Star Lab Co., Ltd., Research and Development, 9 Soi Prachanimitr, Pradipat Road, Samsennai Phayathai, Bangkok 10400, Thailand 4Centex Shrimp, 4th Floor Chalermprakiat Bldg., Faculty of Science, Mahidol University, Rama 6 Road, Bangkok 10400, Thailand Desjardin, D.E., Binder, M., Roekring, S. and Flegel, T. (2009). Spongiforma, a new genus of gastroid boletes from Thailand. Fungal Diversity 37: 1-8. Based on morphological and molecular characters, Spongiforma is described as a new genus of gasteroid boletes belonging in the Boletineae. It is represented by a single species, S. thailandica, that is putatively mycorrhizal with dipterocarp trees in central Thailand. Unusual morphological features include a sponge-like, astipitate, epigeous basidiome with large exposed locules and a strong coal tar odor, and rugulose, reddish brown basidiospores with an apical pore that become smooth and violet grey in 3% potasium hydroxide solution. A description, illustrations, phylogenetic analysis and comparison with allied taxa are presented. Key words: Agaricomycotina, Basidiomycota, Boletineae, molecular phylogenetics, taxonomy. Article Information Received 27 October 2008 Accepted 4 March 2009 Published online 1 August 2009 *Corresponding -
Sequencing Abstracts Msa Annual Meeting Berkeley, California 7-11 August 2016
M S A 2 0 1 6 SEQUENCING ABSTRACTS MSA ANNUAL MEETING BERKELEY, CALIFORNIA 7-11 AUGUST 2016 MSA Special Addresses Presidential Address Kerry O’Donnell MSA President 2015–2016 Who do you love? Karling Lecture Arturo Casadevall Johns Hopkins Bloomberg School of Public Health Thoughts on virulence, melanin and the rise of mammals Workshops Nomenclature UNITE Student Workshop on Professional Development Abstracts for Symposia, Contributed formats for downloading and using locally or in a Talks, and Poster Sessions arranged by range of applications (e.g. QIIME, Mothur, SCATA). 4. Analysis tools - UNITE provides variety of analysis last name of primary author. Presenting tools including, for example, massBLASTer for author in *bold. blasting hundreds of sequences in one batch, ITSx for detecting and extracting ITS1 and ITS2 regions of ITS 1. UNITE - Unified system for the DNA based sequences from environmental communities, or fungal species linked to the classification ATOSH for assigning your unknown sequences to *Abarenkov, Kessy (1), Kõljalg, Urmas (1,2), SHs. 5. Custom search functions and unique views to Nilsson, R. Henrik (3), Taylor, Andy F. S. (4), fungal barcode sequences - these include extended Larsson, Karl-Hnerik (5), UNITE Community (6) search filters (e.g. source, locality, habitat, traits) for 1.Natural History Museum, University of Tartu, sequences and SHs, interactive maps and graphs, and Vanemuise 46, Tartu 51014; 2.Institute of Ecology views to the largest unidentified sequence clusters and Earth Sciences, University of Tartu, Lai 40, Tartu formed by sequences from multiple independent 51005, Estonia; 3.Department of Biological and ecological studies, and for which no metadata Environmental Sciences, University of Gothenburg, currently exists. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Redalyc.Gastrolactarius Denudatus (Basidiomycotina, Russulales), A
Revista Mexicana de Micología ISSN: 0187-3180 [email protected] Sociedad Mexicana de Micología México Calonge, Francisco D.; Vidal, Josep M. Gastrolactarius denudatus (Basidiomycotina, Russulales), a new species from Mexico Revista Mexicana de Micología, núm. 21, diciembre, 2005, pp. 59-62 Sociedad Mexicana de Micología Xalapa, México Available in: http://www.redalyc.org/articulo.oa?id=88302110 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative 5 0 0 2 , 2 6 - 9 5 : 1 2 A Gastrolactarius denudatus (Basidiomycotina, Russulales), Í a new species from Mexico G O L Francisco D. Calonge1 O 2 C Josep M. Vidal I M 1 Real Jardín Botánico, CSIC, Plaza de Murillo 2. 28014 Madrid, Spain E 2 Massaballs 10. 17118 Sant Sadurni de l´Heura, Girona, Spain D A Gastrolactarius denudatus (Basidiomycotina, Russulales), una nueva N especie en México A C Resumen. Se propone Gastrolactarius denudatus como especie nueva para la I ciencia, el cual se diferencia por la carencia de peridio, poseer un latex blanquecino X E opalescente, basidioma diminuto y cistidios lageniformes. Se recolectó creciendo M de forma epigea bajo Pinus patula. Se comentan sus afinidades con especies A T próximas. S I Palabras clave: Basidiomycotina, Russulales, Gastrolactarius, taxonomía, ecología, V México. E R Abstract.Gastrolactarius denudatus is proposed as a new species, showing as the / main differential characters the absence of a peridium, presence of watery white latex, o small basidioma and lageniform cystidia. -
Supplementary Fig
TAXONOMY phyrellus* L.D. Go´mez & Singer, Xanthoconium Singer, Xerocomus Que´l.) Taxonomical implications.—We have adopted a con- Paxillaceae Lotsy (Alpova C. W. Dodge, Austrogaster* servative approach to accommodate findings from Singer, Gyrodon Opat., Meiorganum*Heim,Melano- recent phylogenies and propose a revised classifica- gaster Corda, Paragyrodon, (Singer) Singer, Paxillus tion that reflects changes based on substantial Fr.) evidence. The following outline adds no additional Boletineae incertae sedis: Hydnomerulius Jarosch & suborders, families or genera to the Boletales, Besl however, excludes Serpulaceae and Hygrophoropsi- daceae from the otherwise polyphyletic suborder Sclerodermatineae Binder & Bresinsky Coniophorineae. Major changes on family level Sclerodermataceae E. Fisch. (Chlorogaster* Laessøe & concern the Boletineae including Paxillaceae (incl. Jalink, Horakiella* Castellano & Trappe, Scleroder- Melanogastraceae) as an additional family. The ma Pers, Veligaster Guzman) Strobilomycetaceae E.-J. Gilbert is here synonymized Boletinellaceae P. M. Kirk, P. F. Cannon & J. C. with Boletaceae in absence of characters or molecular David (Boletinellus Murill, Phlebopus (R. Heim) evidence that would suggest maintaining two separate Singer) families. Chamonixiaceae Ju¨lich, Octavianiaceae Loq. Calostomataceae E. Fisch. (Calostoma Desv.) ex Pegler & T. W. K Young, and Astraeaceae Zeller ex Diplocystaceae Kreisel (Astraeus Morgan, Diplocystis Ju¨lich are already recognized as invalid names by the Berk. & M.A. Curtis, Tremellogaster E. Fisch.) Index Fungorum (www.indexfungorum.com). In ad- Gyroporaceae (Singer) Binder & Bresinsky dition, Boletinellaceae Binder & Bresinsky is a hom- (Gyroporus Que´l.) onym of Boletinellaceae P. M. Kirk, P. F. Cannon & J. Pisolithaceae Ulbr. (Pisolithus Alb. & Schwein.) C. David. The current classification of Boletales is tentative and includes 16 families and 75 genera. For Suillineae Besl & Bresinsky 16 genera (marked with asterisks) are no sequences Suillaceae (Singer) Besl & Bresinsky (Suillus S.F. -
Field Nats News No.275 Newsletter of the Field Naturalists Club of Victoria Inc
Field Nats News 275 Page 1 Field Nats News No.275 Newsletter of the Field Naturalists Club of Victoria Inc. 1 Gardenia Street, Blackburn Vic 3130 Editor: Joan Broadberry 03 9846 1218 Telephone 03 9877 9860 Founding editor: Dr Noel Schleiger P.O. Box 13, Blackburn 3130 www.fncv.org.au Understanding Reg. No. A0033611X Our Natural World Newsletter email: [email protected] (Office email: [email protected]) Patron: Governor of Victoria Office Hours: Monday and Tuesday 9.30 am - 4 pm. June 2017 From the President I have virtually completed my second year The deadline for FNN 276 will be as president of FNCV and I must say the 10 am on Tuesday June 6th. FNN time has gone very quickly and I have enjoyed the experience immensely. I continue will be going to the printers on 13th to attend as many of the Club’s activities as I can fit into my timetable. There is al- ways something new to be learnt at every meeting. In particular, I recently I had the June with collation on 20th. privilege of attending the Juniors’ Easter Camp at Mali Dunes. It is clear to me that the future of our organisation rests heavily with the Junior Naturalists and they need to be supported at every level and in any way we can. The enthu- siasm and talent I observed at the camp is very encourag- ing. Claire Ferguson has managed the Juniors for over sev- en years with great dedication and faultless leadership. I would encourage anyone who might be able to contribute to the organisation and running of the group to contact Claire as soon as possible. -
Southern Temperate Amanita Lineages and the Description of the First Sequestrate Species from the Americas
Accepted Manuscript The Gondwanan connection – Southern temperate Amanita lineages and the description of the first sequestrate species from the Americas Camille Truong, Santiago Sánchez-Ramírez, Francisco Kuhar, Zacharie Kaplan, Matthew E. Smith PII: S1878-6146(17)30048-X DOI: 10.1016/j.funbio.2017.04.006 Reference: FUNBIO 810 To appear in: Fungal Biology Received Date: 28 October 2016 Revised Date: 16 March 2017 Accepted Date: 18 April 2017 Please cite this article as: Truong, C., Sánchez-Ramírez, S., Kuhar, F., Kaplan, Z., Smith, M.E., The Gondwanan connection – Southern temperate Amanita lineages and the description of the first sequestrate species from the Americas, Fungal Biology (2017), doi: 10.1016/j.funbio.2017.04.006. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT The Gondwanan connection – Southern temperate Amanita lineages and the description of the first sequestrate species from the Americas Truong, Camille 1*; Sánchez-Ramírez, Santiago 2; Kuhar, Francisco 3; Kaplan, Zacharie 1; Smith, Matthew E. 1 1University of Florida, Department of Plant Pathology, 2523 Fifield Hall, Gainesville FL 32611, USA 2Department of Ecology and Evolutionary Biology, University of Toronto, 100 Queen's park, Toronto, Ontario, M5S 2C6, Canada 3Centro de Investigación y Extensión Forestal Andino Patagónico (CONICET), Ruta 259, Km 4, Esquel 9200, Chubut, Argentina *Corresponding author: [email protected],MANUSCRIPT phone +1 (352) 2734670 Abstract Amanita is a diverse and cosmopolitan genus of ectomycorrhizal fungi. -
Evolutionary History of Serpulaceae (Basidiomycota)
Skrede et al. BMC Evolutionary Biology 2011, 11:230 http://www.biomedcentral.com/1471-2148/11/230 RESEARCH ARTICLE Open Access Evolutionary history of Serpulaceae (Basidiomycota): molecular phylogeny, historical biogeography and evidence for a single transition of nutritional mode Inger Skrede1*, Ingeborg B Engh1, Manfred Binder2, Tor Carlsen1, Håvard Kauserud1 and Mika Bendiksby3 Abstract Background: The fungal genus Serpula (Serpulaceae, Boletales) comprises several saprotrophic (brown rot) taxa, including the aggressive house-infecting dry rot fungus Serpula lacrymans. Recent phylogenetic analyses have indicated that the ectomycorrhiza forming genera Austropaxillus and Gymnopaxillus cluster within Serpula. In this study we use DNA sequence data to investigate phylogenetic relationships, historical biogeography of, and nutritional mode transitions in Serpulaceae. Results: Our results corroborate that the two ectomycorrhiza-forming genera, Austropaxillus and Gymnopaxillus, form a monophyletic group nested within the saprotrophic genus Serpula, and that the Serpula species S. lacrymans and S. himantioides constitute the sister group to the Austropaxillus-Gymnopaxillus clade. We found that both vicariance (Beringian) and long distance dispersal events are needed to explain the phylogeny and current distributions of taxa within Serpulaceae. Our results also show that the transition from brown rot to mycorrhiza has happened only once in a monophyletic Serpulaceae, probably between 50 and 22 million years before present. Conclusions: This study supports the growing understanding that the same geographical barriers that limit plant- and animal dispersal also limit the spread of fungi, as a combination of vicariance and long distance dispersal events are needed to explain the present patterns of distribution in Serpulaceae. Our results verify the transition from brown rot to ECM within Serpulaceae between 50 and 22 MyBP. -
14 Agaricomycetes
14 Agaricomycetes 1 2 3 4 5 1 6 D.S. HIBBETT ,R.BAUER ,M.BINDER , A.J. GIACHINI ,K.HOSAKA ,A.JUSTO ,E.LARSSON , 7 8 1,9 1 6 10 11 K.H. LARSSON , J.D. LAWREY ,O.MIETTINEN , L.G. NAGY , R.H. NILSSON ,M.WEISS , R.G. THORN CONTENTS F. Hymenochaetales . ...................... 396 G. Polyporales . ...................... 397 I. Introduction ................................. 373 H. Thelephorales. ...................... 399 A. Higher-Level Relationships . ............ 374 I. Corticiales . ................................ 400 B. Taxonomic Characters and Ecological J. Jaapiales. ................................ 402 Diversity. ...................... 376 K. Gloeophyllales . ...................... 402 1. Septal Pore Ultrastructure . ........ 376 L. Russulales . ................................ 403 2. Fruiting Bodies. .................. 380 M. Agaricomycetidae . ...................... 405 3. Ecological Roles . .................. 383 1. Atheliales and Lepidostromatales . 406 C. Fossils and Molecular Clock Dating . 386 2. Amylocorticiales . .................. 406 II. Phylogenetic Diversity ...................... 387 3. Boletales . ............................ 407 A. Cantharellales. ...................... 387 4. Agaricales . ............................ 409 B. Sebacinales . ...................... 389 III. Conclusions.................................. 411 C. Auriculariales . ...................... 390 References. ............................ 412 D. Phallomycetidae . ...................... 391 1. Geastrales. ............................ 391 2. Phallales . -
Some Coniophoraceae (Basidiomycetes, Boletales) from the Ethiopian Highlands: Coniophora Bimacrospora, Sp
Cryptogamie, Mycologie, 2004, 25 (3): 261-275 © 2004 Adac. Tous droits réservés Some Coniophoraceae (Basidiomycetes, Boletales) from the Ethiopian highlands: Coniophora bimacrospora, sp. nov. and a note on the phylogenetic relationships of Serpula similis and Gyrodontium François-Xavier CARLIERa, Adane BITEWb, Gabriel CASTILLOc and Cony DECOCKd1 a Unité de Phytopathologie (FYMY), Faculté d’Ingénierie Biologique, Agronomique et Environnementale, Croix du Sud 3, B-1348 Louvain-la-Neuve, Belgique. b School of Medical Laboratory Technology, University of Addis Ababa, P.O. Box 1176, Addis Ababa, Ethiopia. c Laboratoire d’Algologie, de Mycologie et de Systématique Expérimentale, Département de Biologie Végétale, (B22), Université de Liège, 4000 Liège, Belgique. d Mycothèque de l’Université catholique de Louvain (MUCL2, MBLA), Faculté d’Ingénierie Biologique, Agronomique et Environnementale, Croix du Sud 3, B-1348 Louvain-la-Neuve, Belgique ([email protected]). Abstract – Coniophora bimacrospora, sp. nov. is described from the Ethiopian highlands. The taxon is mainly characterized by an olive green hymenial surface, bi-spored basidia, and large, averaging 20 × 15 µm, ellipsoid to broadly ovoid, brownish, cyanophilous, and dextrinoid basidiospores. It is compared to some other Coniophora reported from Africa. Coniophora puteana, C. olivacea, Serpula similis, and Gyrodontium sacchari are also reported from the Ethiopian highlands. The phylogenetic relationships between S. similis, G. sacchari, and other Coniophoraceae are briefly discussed. Africa / Coniophoraceae / Gyrodontium / Serpula / taxonomy Résumé – Coniophora bimacrospora sp. nov. est décrite à partir d’un spécimen collecté dans les hauts plateaux éthiopiens. L’espèce est caractérisée par un hyménium à teinte vert- olive prédominante (olive pale a foncé), des basides bisporées, et des basidiospores de grande taille, atteignant en moyenne 20.2 × 14.8 µm, ellipsoïdes à largement ovales, brunes, cyanophiles, et dextrinoides. -
Indoor Population Structure of the Dry Rot Fungus, Serpula Lacrymans Master of Science Thesis Sarasvati Jacobsen Bjørnaraa
Indoor Population Structure of The Dry Rot Fungus, Serpula lacrymans Master of Science Thesis Sarasvati Jacobsen Bjørnaraa University of Oslo Department of Biosciences Microbial Evolution Research Group Oslo, Norway 2013 FORORD En stor takk til mine veiledere, Håvard Kauserud og Inger Skrede, som introduserte meg til en så fascinerende sopp som Serpula lacrymans. Dere har den fine kombinasjonen av faglig og menneskelig kompetanse som jeg tror enhver masterstudent ønsker seg. -Synet av Håvard som hopper av glede midt i mycel og sporer er ikke noe jeg glemmer med det første... Takk for god innføring i sterilteknikk og kultivering, og takk for hjelp med korrekturlesing! Takk til familie-heiagjengen: Mine foreldre, Mette og Gisle Anker Jacobsen, min lillesøster, Sita «Goffe» Jacobsen, og min mann, Paal Bjørnaraa. Dere stiller alltid opp for meg og lar meg velvillig pepre dere ned med soppsnakk. Takk til mamma og pappa for tidenes tredveårslag! Dere to skal også ha takk for å ha dratt med Goffe og meg på utallige skogturer i barndommen, for å ha sagt ja til å ha padder i badekaret og for at dere lot oss ha Østmarka som lekeplass. Takk til Paal for å ha bidratt med korrekturlesing, for å ha laget «jobbegryta som varer en uke» og for stadige små oppmerksomheter i løpet av innspurten. Takk også til mine svigerforeldre, Aud og Toggen, som er to skikkelig ålreite mennesker. På forhånd takk for at dere kjører oss opp på Engelstadvangen til helgen! Takk til Svarteper for å ha latt artiklene mine ligge i fred. Stort sett. Takk til Cecilie Mathiesen og Birgitte Lisbeth Graae Thorbek for opplæring på DNA- lab. -
Evolutionary Origin, Worldwide Dispersal, and Population Genetics of the Dry Rot Fungus Serpula Lacrymans
fungal biology reviews 26 (2012) 84e93 journal homepage: www.elsevier.com/locate/fbr Review Evolutionary origin, worldwide dispersal, and population genetics of the dry rot fungus Serpula lacrymans € Havard KAUSERUDa,*, Henning KNUDSENb, Nils HOGBERGc, Inger SKREDEa aMicrobial Evolution Research Group (MERG), Department of Biology, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway bBotanical Museum, Gothersgade 130, DK-1123 Copenhagen K, Denmark cDepartment of Forest Mycology & Pathology, Swedish University of Agricultural Sciences, Box 7026, S-750 07 Uppsala, Sweden article info abstract Article history: Recent research on the evolution, phylogeography and population genetics of the dry rot Received 5 July 2012 fungus Serpula lacrymans is reviewed. The fungus causes severe damage to construction Received in revised form wood in temperate regions worldwide. Multi-locus genetic analyses have shown that S. la- 15 August 2012 crymans includes two cryptic species currently referred to as var. shastensis and var. lacry- Accepted 17 August 2012 mans. Both lineages occur naturally in high altitude regions, but var. lacrymans has also spread from its natural range in Asia, and established itself in indoor environments in Keywords: temperate regions worldwide. Japan was apparently colonized independently from Europe, Basidiomycete North and South America by var. lacrymans. The population found in Australia and New Boletales Zealand seems to represent a mixture of the Japanese and the Euro-American lineages. Brown rot Little genetic variation exists in the founder populations of var. lacrymans worldwide. Decay Due to the introduction of a limited number of vic (vegetative incompatibility) alleles Dry rot into the founder populations, genetically different individuals often cannot recognize Invasive self from non-self through the vegetative incompatibility response.